TCONS_00072893 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072893
Unique NameTCONS_00072893
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3272

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072893 ID=TCONS_00072893|Name=TCONS_00072893|organism=Clytia hemisphaerica|type=transcript|length=3272bp
TTCCTGATTTCATGAATGTGCAAAGTTGCCCAGGGAATTTGATAAGCACG
TTGCACTCAGTGGCTGGAGAAGGCGACACAAAAATCactttaaactaaaa
ttgctcGAGGTTTTAAAGTACAACAAAAATGGCACCATATGCTAAGCTAC
TCACAAGgTTCAGCCTTCACTCAACCCACTTATTTCGAGCTCTGCAATTA
CGACAAATGGCATccttatcaaaaaatatttctgtcACACATGGCAATTT
TGAAACACTCCCAAATAAAGTAAAGGATTTTGTCgtacaaaaaagtgaat
tatgtCAGCCAGATTTTCTCCACATTTGTGATGGCTCAGAAGATGAGGCA
CAAAGCTTAGCTGATCTTCTTGTAAAAAATGGAACTgcaagaaaattgga
aaaaatggataATTGcTATGCTGTCCGTACTAATCCAGCTGATGTTGCAC
GTGTTGAATCAAAAACGTTGATCTGTACTGAAAATAAACATGATACTGTC
CCCCACACCAAAGATGGAGTTAGATGTTCAGTTGGACAATGGACTGAGCC
TAAAGAAATGAAGGAAAAGCTCCAAGGATTATTCCAAGGATGCATGAAGG
GAAGAACCATGTatgttattccattttcaatgGGACCTGTTGGCTCTCCT
TTGTCCAAAATTGGTATTGAACTTACTGATTCTCCATATGTCTCAATGTC
TATGGGTGTTATGACTAGAATGGGATCAAAAGTATTGAATTCTCTGGGTG
ATGGTGATTTTGTCAAATGTTCTCACTCTGTTGGACAACCTTTACCTCTT
GAAAAACCAGACCCATATAACTGGCCATGTAATCCAGAAAAGACTGTTAT
CACACATTTCCCAGCTGACAGAGAAATCATCTCCTTTGGATCTGGTTATG
GTGGAAACTCACTTCttggaaagaaatgttttgcTTTGAGAATCGCATCT
GCTGTTGCTAGAGATGAAGGATGGTTAGCTGAACACATGCTGATCCTTGG
ATTGACTAACCCACAAGGTGAAAAGAAATATGTTGCTGCTGCATTTCCAA
GTGCTTGTGGAAAGACAAACTTAGCTATGTTAACCCCAACTTTACCAGGA
TGGAAAGCAGAATGTGTCGGTGATGATATTGCATGGATGAAATTTGACGA
GGAAGGTGTCTTGAGAGCTATTAATCCAGAATATGGATTCTTTGGTGTTG
CCCCCGGAACCTCAATGGAAACCAACCCACAAGCATTAATTGCTTGTCAG
AAGAACACTGTCTTTACTAACTGCGCTACTACTGATGATGGTGAAATCTA
CTGGGAAGGTCTTGAAAAGGAAGTCAACCTTGAAGGTCGTTCAGTCACTG
ACTGGTTGGGTAAACCATGGACTAAAGAATCTGGAACAAAAGCTGCTCAT
CCAAACTCTCGATTCTGTACGCCAGCTGGAAATTGCAAAGTTATCGATCC
ACTTTGGGAAGATCCTAAAGGTGTCCCAATCTCTGCTATCTTGTTTGGTG
GACGCCGACCAGAAGGTGTGCCATTGATCTACGAAGCATTTAATTGGCAA
CATGGTGTGTTTGTTGCAAGTGCTCTTTGCTCTGAAACGACGGCTGCTGC
AGAACACAAAGGCAAAGCTATAATGAGAGATCCCTTCGCCATGAGACCAT
TCTTTGGATATAACGCTGGACATTACTTTAAACACTGGTTGAGTCTTGAA
GATGATAAGAAACATCAATTGCCTAAAATTTTCCATGTCAACTGGTTCAG
AAAAGGAGAAGACGGCAAATTCCTATGGCCTGGATTCGGTGAAAACTGTC
GTGTCTTGAAATGGGTTTTCGATCGCGTCGACGGCAAACACGGAGTCCAA
AAATCCACCGTCGGATATTTACCTGAAAATGACGCATTAGACTTAAATGG
ACTAGATGAAGATTTAAATATGAAAGAACTAATGTCTGTTCCCACTGACT
ATTGGATGGAACAACTAGATGATATtgagaaatattataatcaacAATTT
GGTGAAGATATTCCACAACAATTATGGGATGAAGTACATTCTTTCAGGGA
ACGATTGACAAAATCTCCTACCGCCGCTTAAATGTGTTATTTATTGGAAG
ATGATGATTGTTGTTGATGCTTTTTGTCCTTTTTAACcttatatttagaa
tttttcctACACCatttctgaaaaatgaaaaacaatttttatgatGTTGT
AGTCACAATCGGACTTGTcattttcttcttattttcCTCATTTTACTGAG
TTGGAATTGTCAATAAGTGTaaaatgattttacttttttatttagtgatc
GTAAAACAAAATTACACTAAGAAAGCTAAGCTATGCACGTTGCTAATATA
CAATANtttacttttttatttagtgatcGTAAAACAAAATTACACTAAGA
AAGCTAAGCTATACACGTTGCTAATATACAATAGTATAGTAAAGAggact
tttttagttttagggacttgatttctttttaaagtgtttgttcgttttct
ttttgttaACAGAATTTTTTAATTGTTCAGCTGTatttaaaaatgctatt
ttatgtctttgttttattttgttatatctttatttttcagctttcttttg
gtACAATATACAGTCTTTTTTTTCGTTTATCTGTCACGGTATTATTTTTG
TTTGGCTAGAGAGATATTTATaagaaatattaaaatttaaatattatTAT
CATGTGATAGtttaacatttttgtaaacttcAAGTTTATAAGGGAGAATA
ATTTTTTGTTACTTTGTATCATCTTATTTTAATGCTAGagtttatatttg
ttttgtaATATTGACGTTTTTGAAGTCAGTAAAATACAacgttttcgaaa
aaaaatcaacattgcTGCACGGTTTTATACCCCCTAATGAATCGTTCAAT
TTTTTATTAATATTTGCAGAATCaagatttcaatgtttttttccttttac
tCTTTTCATCAGACGAATTgataagaaattaaatttttgcgtttaagaga
gaaaaaaaacaaatagccAGAAAAAACATAGTCAGCGAAGATTTTTACCT
GATTTCAATATCTCGCCGCTGGCTCACCATAGGATAACGATGGATGGCCT
CACAATATTATTTcaaactaaagtctgttccaaaaatgACAGTCAGCACA
TTTTGATACATTGTCCTTGAAGGTGTAGAGATAAATTAATATACTGCTAG
AAATATCGTTTTGAGTGGATTTCCacctttttaaaactttggaaCTTccc
tgatttcaaatatgtattcgga
Run BLAST on NCBI

transcript from alignment at scaffold_86:546396..552241+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072893 ID=TCONS_00072893|Name=TCONS_00072893|organism=Clytia hemisphaerica|type=transcript|length=5846bp|location=Sequence derived from alignment at scaffold_86:546396..552241+ (Clytia hemisphaerica)
TTCCTGATTTCATGAATGTGCAAAGTTGCCCAGGGAATTTGATAAGCACG
TTGCACTCAGTGGCTGGAGAAGGCGACACAAAAATCactttaaactaaaa
ttgctcGAGGTTTTAAAGTACAACAAAAATGGCACCATATGCTAAGCTAC
TCACAAGGTATACAATTTTTGTTTACACCAAATTTCTcggaatttttttg
caaaatgaagtcattgcaaagcaatttaaaaaaataaattttactcGACT
GTTCGATTCGATGAATTTGAGGCTTTTGTAGTTTTTATTCCTTGACTCTC
ATGGACATAGATCAGCATGATTTGTTTATAGAACAAGGTATATTGTTTTG
TTTGCAGTATAGTtgttaaaaaagttttgtttgttttggctTATGACATT
GTTTTTATTACAAACTTTCGaccttttgttcttatttattttGTGTTGAT
GGGACTTTTTATAGCAgtatttgactgaaatttgaaaCCTTTTATAAAGC
ACTCAATGCCTTTTTACTTCCGCGTCTATAACAAGTTTTTAGATAGATTT
ATCTATTTTTGTGAGTTTTGGACGCATTCAACCGAAAATATAgaaacatt
tttagatttcttacTCCTAAACTAAATTATTCATGATCAATACAAGAGTT
TCCAATCCCTATACAAATGACCTCTTTTCAATCTCTAAGCTATGATTCCT
ATAATATTTCTTGACTTCATTCATCCCGTTTAAGGATTTGAATATGTCTT
TTAAatacaaaatttagaaatgtaAAAATGGCTTTACAATTAATGATAGG
AACTTATCAGTTAGATTTAAATAGTTTTTAAAGATTAATGTCTTgcatta
agaagattaaaagaCATTTAAGAGTTTCTATTGCTCAAAACAGTTAGACT
CACACCTTAATTTAAACCCTATTGTCAAGACACAAAAATTGAAATGCTAG
AATTCTAAGTACCTTATAACCAACCTATatgtaaaatagaaaatgaaccA
CTGAACTGACTTggatattttttaattcaagggTTTATTTTATAGATAAA
CTTGGCACTACATTAGACATTCCCATACTTTCCCATTAATTCAAAAGACT
CCTCAAAATCAAAAGCgtgaaaatgttatatttttgtttcaggTTCAGCC
TTCACTCAACCCACTTATTTCGAGCTCTGCAATTACGACAAATGGCATcc
ttatcaaaaaatatttctgtcACACATGGCAATTTTGAAACACTCCCAAA
TAAAGTAAAGGATTTTGTCgtacaaaaaagtgaattatgtCAGCCAGATT
TTCTCCACATTTGTGATGGCTCAGAAGATGAGGCACAAAGCTTAGCTGAT
CTTCTTGTAAAAAATGGAACTgcaagaaaattggaaaaaatggataATTG
GTAAGAATGCACTTATGATTACTATTAACAAAGAATACCTCCACTCACTT
TTAACTaaaaaccattttgatttttttaatcaaaattgtcatGATAAAGA
TTgaatattctttatttttagcTATGCTGTCCGTACTAATCCAGCTGATG
TTGCACGTGTTGAATCAAAAACGTTGATCTGTACTGAAAATAAACATGAT
ACTGTCCCCCACACCAAAGATGGAGTTAGATGTTCAGTTGGACAATGGAC
TGAGCCTAAAGAAATGAAGGAAAAGCTCCAAGGATTATTCCAAGGATGCA
TGAAGGGTAAAGATTTGAGATTTGAAATTATACTTAATACATTGCTCTGA
TTTGTGAGTGTTTTTTACATGGTTTTCACATGGTTATGTTTCatctgatt
ttttgtttttattcatgATCTCTTTTGTATCTTATAGGAAGAACCATGTa
tgttattccattttcaatgGGACCTGTTGGCTCTCCTTTGTCCAAAATTG
GTATTGAACTTACTGATTCTCCATATGTCTCAATGTCTATGGGTGTTATG
ACTAGAATGGGATCAAAAGTATTGAATTCTCTGGGTGATGGTGATTTTGT
CAAATGTTCTCACTCTGTTGGACAACCTTTACCTCTTGAAAAACCAGACC
CATATAACTGGCCATGTAATCCAGAAAAGACTGTTATCACACATTTCCCA
GCTGACAGAGAAATCATCTCCTTTGGATCTGGTTATGGTGGAAACTCACT
TCttggaaagaaatgttttgcTTTGAGAATCGCATCTGCTGTTGCTAGAG
ATGAAGGATGGTTAGCTGAACACATGCTGGTATGTTCTCATTCCCCTTGA
ATTCGCAAAGTTAATTTATTCATGCTATCAAGTGCTATCTATGAAATCTG
AAAAGTAACTAATTGGTTTTCATTGTCACCTCTTTTAGATCCTTGGATTG
ACTAACCCACAAGGTGAAAAGAAATATGTTGCTGCTGCATTTCCAAGTGC
TTGTGGAAAGACAAACTTAGCTATGTTAACCCCAACTTTACCAGGATGGA
AAGCAGAATGTGTCGGTGATGATATTGCATGGATGAAATTTGACGAGGAA
GGTGTCTTGAGAGCTATTAATCCAGAATATGGATTCTTTGGTGTTGCCCC
CGGAACCTCAATGGAAACCAACCCACAAGCATTAATTGCTTGTCAGAAGA
ACACTGTCTTTACTAACTGCGCTACTACTGATGATGGTGAAATCTACTGG
GAAGGTACAAcaagatcaaatttaatttctcaGACTTCTTCTTGCCCTTT
TTTAATTGCTGGAAATGatcatcaatttttaaaaatgactGAAGTTCTTA
AGCTACACTCTATTAATTTCGCTATCAATGCGCTAATCTGTATTCATGAT
TCATGAATATTAATTCGattaatttgatgaattttttctcCAGGTCTTGA
AAAGGAAGTCAACCTTGAAGGTCGTTCAGTCACTGACTGGTTGGGTAAAC
CATGGACTAAAGAATCTGGAACAAAAGCTGCTCATCCAAACTCTCGATTC
TGTACGCCAGCTGGAAATTGCAAAGTTATCGATCCACTTTGGGAAGATCC
TAAAGGTGTCCCAATCTCTGCTATTTTGTTTGGTGGACGCCGACCAGAAG
GTGTGCCATTGATCTACGAAGCATTTAATTGGCAACATGGTGTGTTTGTT
GCAAGTGCTCTTTGCTCTGAAACGACGGCTGCTGCAGAACACAAAGGCAA
AGCTATAATGAGAGATCCCTTCGCCATGAGACCATTCTTTGGATATAACG
CTGGACATTACTTTAAACACTGGCTGAGTCTTGAAGATGATAAGAAACAT
CAATTGCCTAAAATTTTCCATGTCAACTGGTTCAGGAAAGGAGAAGACGG
CAAATTCCTATGGCCTGGTAAGTCCTTGTTTACATTCTCATGGCTCTCTT
TCATTTCATATAGACTTTACAAATTAANACCAACCCACAAGCATTAATTG
CTTGTCAGAAGAACACTGTCTTTACTAACTGCGCTACTACTGATGATGGT
GAAATCTACTGGGAAGGTACGAcaagatcaaatttaatttctcaGACTTC
TTCTTGCCCTTTTTTAATTGCTGGAAATGatcatcaatttttaaaaatga
ctGAAGTTCTTAAGCTACTCTATTCATTTCGCTATCAATGCGCTAATCTG
TATTCATGATTCATGAATATTAATTCGattaatttgatgaattttttctc
CAGGTCTTGAAAAGGAAGTCAACCTTGAAGGTCGTTCAGTCACTGACTGG
TTGGGTAAACCATGGACTAAAGAATCTGGAACAAAAGCTGCTCATCCAAA
CTCTCGATTCTGTACGCCAGCTGGAAATTGCAAAGTTATCGATCCACTTT
GGGAAGATCCTAAAGGTGTCCCAATCTCTGCTATCTTGTTTGGTGGACGC
CGACCAGAAGGTGTGCCATTGATCTACGAAGCATTTAATTGGCAACATGG
TGTGTTTGTTGCAAGTGCTCTTTGCTCTGAAACGACGGCTGCTGCAGAAC
ACAAAGGCAAAGCTATAATGAGAGATCCCTTCGCCATGAGACCATTCTTT
GGATATAACGCTGGACATTACTTTAAACACTGGTTGAGTCTTGAAGATGA
TAAGAAACATCAATTGCCTAAAATTTTCCATGTCAACTGGTTCAGAAAAG
GAGAAGACGGCAAATTCCTATGGCCTGGTAAGTCCTTGTTTACATTCTCA
TGGCTCTCTTTCATTTCATATAgacttttcaaattatttgtGAACCTTTC
CTCttcattttataaaatttccTTGAATACCAGTTTGAAAGACTAAAATC
TCTCATATTAAAAATGGCATGCAATCTCAAAGGAGGGATTATAATAGTTT
TCTTAGCTGTAGTTTCCAAACAACCTATAACAATTAcaataattttcata
tttcagGATTCGGTGAAAACTGTCGTGTCTTGAAATGGGTTTTCGATCGC
GTCGACGGCAAACACGGAGTCCAAAAATCCACCGTCGGATATTTACCTGA
AAATGACGCATTAGACTTAAATGGACTAGATGAAGATTTAAATATGAAAG
AACTAATGTCTGTTCCCACTGACTATTGGATGGAACAACTAGATGATATt
gagaaatattataatcaacAATTTGGTGAAGATATTCCACAACAATTATG
GGATGAAGTACATTCTTTCAGGGAACGATTGACAAAATCTCCTACCGCCG
CTTAAATGTGTTATTTATTGGAAGATGATGATTGTTGTTGATGCTTTTTG
TCCTTTTTAACcttatatttagaatttttcctACACCatttctgaaaaat
gaaaaacaatttttatgatGTTGTAGTCACAATCGGACTTGTcattttct
tcttattttcCTCATTTTACTGAGTTGGAATTGTCAATAAGTGTaaaatg
attttacttttttatttagtgatcGTAAAACAAAATTACACTAAGAAAGC
TAAGCTATGCACGTTGCTAATATACAATANtttacttttttatttagtga
tcGTAAAACAAAATTACACTAAGAAAGCTAAGCTATACACGTTGCTAATA
TACAATAGTATAGTAAAGAggacttttttagttttagggacttgatttct
ttttaaagtgtttgttcgttttctttttgttaACAGAATTTTTTAATTGT
TCAGCTGTatttaaaaatgctattttatgtctttgttttattttgttata
tctttatttttcagctttcttttggtACAATATACAGTCTTTTTTTTCGT
TTATCTGTCACGGTATTATTTTTGTTTGGCTAGAGAGATATTTATaagaa
atattaaaatttaaatattatTATCATGTGATAGtttaacatttttgtaa
acttcAAGTTTATAAGGGAGAATAATTTTTTGTTACTTTGTATCATCTTA
TTTTAATGCTAGagtttatatttgttttgtaATATTGACGTTTTTGAAGT
CAGTAAAATACAacgttttcgaaaaaaaatcaacattgcTGCACGGTTTT
ATACCCCCTAATGAATCGTTCAATTTTTTATTAATATTTGCAGAATCaag
atttcaatgtttttttccttttactCTTTTCATCAGACGAATTgataaga
aattaaatttttgcgtttaagagagaaaaaaaacaaatagccAGAAAAAA
CATAGTCAGCGAAGATTTTTACCTGATTTCAATATCTCGCCGCTGGCTCA
CCATAGGATAACGATGGATGGCCTCACAATATTATTTcaaactaaagtct
gttccaaaaatgACAGTCAGCACATTTTGATACATTGTCCTTGAAGGTGT
AGAGATAAATTAATATACTGCTAGAAATATCGTTTTGAGTGGATTTCCac
ctttttaaaactttggaaCTTccctgatttcaaatatgtattcgga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045230XLOC_045230Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072893-exon-scaffold_86-1491911889:546396..546552TCONS_00072893-exon-scaffold_86-1491911889:546396..546552Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:546396..546552TCONS_00072893-exon-scaffold_86-1510915933:546396..546552Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:546396..546552TCONS_00072893-exon-scaffold_86-1575043694:546396..546552Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:547538..547795TCONS_00072893-exon-scaffold_86-1491911889:547538..547795Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:547538..547795TCONS_00072893-exon-scaffold_86-1510915933:547538..547795Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:547538..547795TCONS_00072893-exon-scaffold_86-1575043694:547538..547795Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:547917..548101TCONS_00072893-exon-scaffold_86-1491911889:547917..548101Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:547917..548101TCONS_00072893-exon-scaffold_86-1510915933:547917..548101Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:547917..548101TCONS_00072893-exon-scaffold_86-1575043694:547917..548101Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:548233..548624TCONS_00072893-exon-scaffold_86-1491911889:548233..548624Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:548233..548624TCONS_00072893-exon-scaffold_86-1510915933:548233..548624Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:548233..548624TCONS_00072893-exon-scaffold_86-1575043694:548233..548624Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:548734..549049TCONS_00072893-exon-scaffold_86-1491911889:548734..549049Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:548734..549049TCONS_00072893-exon-scaffold_86-1510915933:548734..549049Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:548734..549049TCONS_00072893-exon-scaffold_86-1575043694:548734..549049Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:549239..549258TCONS_00072893-exon-scaffold_86-1491911889:549239..549258Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:549239..549258TCONS_00072893-exon-scaffold_86-1510915933:549239..549258Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:549239..549258TCONS_00072893-exon-scaffold_86-1575043694:549239..549258Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:550069..550522TCONS_00072893-exon-scaffold_86-1491911889:550069..550522Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:550069..550522TCONS_00072893-exon-scaffold_86-1510915933:550069..550522Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:550069..550522TCONS_00072893-exon-scaffold_86-1575043694:550069..550522Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1491911889:550752..552241TCONS_00072893-exon-scaffold_86-1491911889:550752..552241Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1510915933:550752..552241TCONS_00072893-exon-scaffold_86-1510915933:550752..552241Clytia hemisphaericaexon
TCONS_00072893-exon-scaffold_86-1575043694:550752..552241TCONS_00072893-exon-scaffold_86-1575043694:550752..552241Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:546396..552241 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36169	1.03183	0.368852	0.362603	0.115519	0	0	0.0225335	0.055942	0.154175	0.0181768	0.188507	0.00614143	1.82359	0.0317225	0.054346	2.84964	1.00824	2.50944	0.301579	0.892856	0.700171	0.18529	0.382002	0.00157366	0.00332762	3.32631	4.32977	0.333517	0.975957
Blast
[Close]
BLAST of TCONS_00072893 vs. Swiss-Prot (Human)
Match: PCKGC (Phosphoenolpyruvate carboxykinase, cytosolic [GTP] OS=Homo sapiens GN=PCK1 PE=1 SV=3)

HSP 1 Score: 816.994 bits (2109), Expect = 0.000e+0
Identity = 377/616 (61.20%), Postives = 474/616 (76.95%), Query Frame = 3 
Query:  216 LSKNISVTHGNFETLPNKVKDFVVQKSELCQPDFLHICDGSEDEAQSLADLLVKNGTARKLEKMDNCYAVRTNPADVARVESKTLICTENKHDTVPHTKDGVRCSVGQWTEPKEMKEKLQGLFQGCMKGRTMYVIPFSMGPVGSPLSKIGIELTDSPYVSMSMGVMTRMGSKVLNSLGDGDFVKCSHSVGQPLPLEKPDPYNWPCNPEKTVITHFPADREIISFGSGYGGNSLLGKKCFALRIASAVARDEGWLAEHMLILGLTNPQGEKKYVAAAFPSACGKTNLAMLTPTLPGWKAECVGDDIAWMKFDEEGVLRAINPEYGFFGVAPGTSMETNPQALIACQKNTVFTNCATTDDGEIYWEGLEKEVNLEGRSVTDWLGKPWTKESGTKAAHPNSRFCTPAGNCKVIDPLWEDPKGVPISAILFGGRRPEGVPLIYEAFNWQHGVFVASALCSETTAAAEHKGKAIMRDPFAMRPFFGYNAGHYFKHWLSLEDDKKHQLPKIFHVNWFRKGEDGKFLWPGFGENCRVLKWVFDRVDGKHGVQKSTVGYLPENDALDLNGLDEDLNMKELMSVPTDYWMEQLDDIEKYYNQQFGEDIPQQLWDEVHSFRERLTK 2063
            L+ +  V  G+ ++LP  V++F+   +ELCQPD +HICDGSE+E   L   + + G  R+L+K DNC+   T+P DVAR+ESKT+I T+ + DTVP  K G+   +G+W   ++ ++     F GCMKGRTMYVIPFSMGP+GSPLSKIGIELTDSPYV  SM +MTRMG+ VL ++GDG+FVKC HSVG PLPL+KP   NWPCNPE T+I H P  REIISFGSGYGGNSLLGKKCFALR+AS +A++EGWLAEHMLILG+TNP+GEKKY+AAAFPSACGKTNLAM+ P+LPGWK ECVGDDIAWMKFD +G LRAINPE GFFGVAPGTS++TNP A+   QKNT+FTN A T DG +YWEG+++ +   G ++T W  K W+ E G   AHPNSRFCTPA  C +ID  WE P+GVPI  I+FGGRRP GVPL+YEA +WQHGVFV +A+ SE TAAAEHKGK IM DPFAMRPFFGYN G Y  HWLS+      +LPKIFHVNWFRK ++GKFLWPGFGEN RVL+W+F+R+DGK   + + +GY+P+ DAL+L GL   +NM EL S+  ++W ++++DIEKY   Q   D+P ++  E+ + ++R+++
Sbjct:    9 LNLSAKVVQGSLDSLPQAVREFLENNAELCQPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLALTDPRDVARIESKTVIVTQEQRDTVPIPKTGL-SQLGRWMSEEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEAVGDGEFVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPL-ASGVTITSWKNKEWSSEDGEPCAHPNSRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKLPKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKGLGH-INMMELFSISKEFWEKEVEDIEKYLEDQVNADLPCEIEREILALKQRISQ 621
The following BLAST results are available for this feature:
BLAST of TCONS_00072893 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCKGC0.000e+061.20Phosphoenolpyruvate carboxykinase, cytosolic [GTP]... [more]
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