TCONS_00072855 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072855
Unique NameTCONS_00072855
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072855 ID=TCONS_00072855|Name=TCONS_00072855|organism=Clytia hemisphaerica|type=transcript|length=1391bp
tcttcatattttcatttagaagtaaataaagtaaacaaaaaaaattaaag
aatacATCAATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCA
GTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATACAACAAACTGA
AACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGTGAAAGAAAAG
TTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTCAAAATGAGAT
GACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTTCAACAACAAA
AGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGATAATAACGCT
GCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGATATGAAATCGA
AATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAGCTTgagGCTG
AAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGAAGagaatgtt
tttattcataaACAACTGAAAGATCGAGACGAACAACTGAAAAGTGCTTC
ATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTGGAAAACAAAA
TTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGA
TTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTAGA
AGATATGAAATACGCATTGCATCAGTCCAATAGACTCAACCACCAATATG
AACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAATTTTAAACAT
TTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggcaaaagaaaatc
ttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAA
AATCGAGACAATCAAACCTACCAAAATCCTAAATTGAATTAATAAGCATT
TTTTGCAGTTTTTGTAACTGTAAGTTTTGGCTAGCAATACTTTAAGACTT
TTCCAGATCTATTCAAAGTATATAATAGTCCTCGTGGTGAATATGTTGTG
AATTTGTTAATATTTTGTGTTTGTGttaattgtacaaaaaaatcgaaaat
cgacctttATAGAGAGACTTTACTGACCGCCAAAAGGATTGTCCTGTGAG
GATATAGCTTAATGGTTCTTGAagtatcaaatatttttttaaactacTTT
ATAAAATATGGTGTTTTATTTGTGAATATATTAATCaacttttgtaaatt
ttattcTTAAGAAAAGGTCAATTTTGTCAAGAAATTAGGAATTTTCGTAT
TTTCAGTGTGATATGTTGTTTGATACTTGATCTGAAAACGATCATGGTCT
GCGATCcttcatgaaaataaaaaatggaagATCCTAGAAGA
Run BLAST on NCBI

protein sequence of TCONS_00072855-protein

>TCONS_00072855-protein ID=TCONS_00072855-protein|Name=TCONS_00072855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MTGIGDIPPFHVCQSLTAENEVLNNKYNKLKRKYKELYQEMLEVKEKLIR
IEIHEEYKGLQNEMTEQHQGKYKKKVLQQQKTIADKTNRNKEEDNNAAKL
VSLYDNLMKRYEIEIKLNRNQTKKIKKLEAEKEKLKDDIFKREEENVFIH
KQLKDRDEQLKSASSLNNNTKSSRQGLENKIHVLTKDRERLMKENSRLKE
ELHGLDAGFFEELEDMKYALHQSNRLNHQYERTLKKLCKQTGMNFKHLMA
VSTSAQTSDGKRKSSTPTATSSSVGQLSNRKSRQSNLPKS
Run BLAST on NCBI

transcript from alignment at scaffold_86:303265..313069+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072855 ID=TCONS_00072855|Name=TCONS_00072855|organism=Clytia hemisphaerica|type=transcript|length=9805bp|location=Sequence derived from alignment at scaffold_86:303265..313069+ (Clytia hemisphaerica)
tcttcatattttcatttagaagtaaataaagtaaacaaaaaaaattaaag
aatacATCAATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCA
GTCGGtaagttttcaagaaaatattttttaaatttgaaagacCCTGTAAT
TCACACAGAATTATGATTATGATTTCTTTTAaagtacagcacctgacccc
gagaatgtaggtgaaatttgaatcagacctgaaagatgtagatttgcatt
ttaaaagatattaaatattttcaacgaaattttgaactctcaaaatcctt
tcccaggggttggtttcattacttttgatagatagaccaattttttttat
ccttgaagttgactcccatttttgttatagcccccagaatgtaggtttgg
tcttatggctttaaatctagtaatagtaaaatgttgatattttttcaatt
ggattaattctaacagcaaattttagaaatgttttatgcgaaaacaatat
tctaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNaggacgaaaagaagagacaagaaagtt
gtttttattttgtaggttgaaaattttgtgttgaaatatgtgaataatgt
aacaacacccctgcctcgcagccctggtggaactttttcccacatcgggt
ccaaaaatttctacttaagtcccaatttgaatataaattctattgctcca
aacttaggcaaattttctgattgggctggggccccaacgggtctgggaca
cgtcgtaaaagctcaaaatttcaacattaatcatctctcaggtagtactt
tcatgttataaaagtacaacaaacaagttttatataatttgacagactta
aAATGTCGGGTTATAAAGAcccccaaattgtaggtcaactaaccccaaaa
gttaggtcaaacattttcgtcaaaatatccaACTCAGAAcagtaaatatt
gaaatggactattttccccaattccttagttcattaggactaagaaaata
ccctatcatcataacttaattccaatagatttcgatttagagaggattta
tttaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNcaaatttttatgaagttgaactatcgttagggctacaatgcta
aaaaatgagaaacctacattctcggggtttactacattctcggggtcagg
tgctgtagtAATACTATTGATTTCTACATCGCTTCTTAATAAAAGACTTG
AAGTGTGTAGGAATCTTTCCATCTCATTCAACCCGGTCGTGAATCGCCAC
CAAGTTCTACTAAAGCATGGGTAAAGCATAGGTTTATTGAAGTGATTGCT
TCCATTAATATTCTATCAATCATTTGGTTTTTCTATTTAATATCTAAGTA
GGGCTGGCGGCTGGCGATTTTTTTCGAACCAAAAACAATTCTTGAAATTG
TTCGGAtatcccctggaaaatggcaaaatttgcaaaaaaaggaaatataG
GCAGGCAATTCTTAGTTATGAAAGCCCTCGAAAAAACATACGATTCATAA
TTGAAACTGTCTGTAGCCTGTCCCACCCCTACCACGGAGGATTTTTGCAT
TCTTTGGAAAAATCTTGCTGTGTGAGGCAATTCAAGGTTTTTTATCTGCA
AGAGCTTGGTAGCGGCTAGTTATCAGGTTACCTTCGTTGAATACCAATGT
CCCGTTACTTTACCAGCTGACTGCGGAGAATGAAGTTTTGAACAACAAAT
ACAACAAACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAA
GTGAAAGAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCT
TCAGTAAGTATCTTCGTGTTCGTCTACACAAGGTCACTTTTTGGTATATT
GCAGTTGAACACCATTTAAAGAGTGCTCGATAACTGTGTAGAGcaaattc
atattttttttcaaaatttcgctGTTAAAGAAAGTACATTACTTCAAGTT
TTATGTTTTACGGCAATCATCAGACGtacaaataaaaacttttttctatt
ttatttgtaCGTCTGATGATTGCCGTAAGGCATGGAACTTGAATTAATGT
ACTTTCTTAATagcgaaattttgaaataaaaatagatatacagttgacgc
tctctaattcgatcttcaaggggaattggattttcatcgaataagggagc
tcgTCGAATAAAAGAGCGTTGTTTATGAGGGTTtctcgaataagggagcc
tattgagtagtagaacgtcgaataagagagcatcaactgtatttGTCGGT
CTGTTTCGTAGAAATGAGATGACTGAACAGCATCAAGGCAAATACAAGAA
GAAAGTCCTTCAACAACAAAAGACTATAGCTGACAAAACCAATCGAAACA
AAGAAGAGGATAATAACGCTGCAAAGTAAGGACCACTTAATGACTTAATA
TCCCCTTCGAAAAATATACTGGTTtaatagaggtttttcatgtttgGGTA
AATTACGTAATTTCCGGTACCTTCTGTGTGTGCCCTAGACTTAATAAGAA
TGTTTTTAAGTCATTTTCTTTATAGATTGGTGAGTCTATATGACAATTTA
ATGAAAAGATATGAAATCGAAATAAAACTCAATCGAAATCAAACGAAAAA
GATCAAAAAGCTTgaggtaaactttttttttttctgtcatttttttcgAT
TGATTTTTGCGCTGCCAGCCTCTTGAGTTTTTCACGAAACATtataatcg
ttttttttttataatttcgtACACAAAACGAAATTGTTCGATGTCatgta
aaaacaattttattaatGTTTACTAACCCTATGGCTCTCCAATGCTTAAT
AGTTGGCAATCGCTTTTTTGctcttaaaaatattctttttataaTACAGA
AATGAGGCGCGTctcttatgctgacaaagcagaactAACTatagaatttc
tcaaaatttgtgtattcatgatatgcaacactggagagtcttctgagaat
tttcaaaaagttcaacccaatacgtcacttaaacaatggaaaaagtgacg
tattgggtggaacttttttaaaattctcagaagactctccagtgttgcat
atcatgaataatcaGGTATGGTCTAACTTTGTGCTTGCGCAGCGCGGGag
atagactagtaaactagtcgttgaaaacagacccatatacaaaaaattca
agctccaaataaaaagaatcgaagaggtgaggttgcgtgtcttttctgaa
tttcaacgactagaagcttcttccctcaaaaaacgttgtttaattttaca
acattttttaggtttttgagaatccatccaacttttttgactaaaatgat
atttcatagtaacattaaacatgggactcacgcgcgctgaatattttatt
agtgtttacattatttgattgacagttttattataagtaataaccgacta
gtttactagtctacgcGGGAGAGGGAAAAactgttctttcttttgtttaa
tgcTGCTATGTAAGCAAAGGTTAAGAGATACGCTAAATGATGTCCTTTTt
aaatctcatggttgattgaaattcgattgacgtttttgcctggggggggg
ggggggcagtcaggcaaattgaccgacgggtatgtgcggcggttaagggt
atgtttttcaaaacatcaggaatgcactgtaagggtggacttttgataaa
tgcactgtaagggtggacttttgataaatgcactgtaagggtggaaattt
cagcaaacctgggaaaaattgcaaatttttgctcgaaaatcttgattttt
tttgctctaaaagagtttaaaatttgaaaaaatgcattgtaagggtatga
atttcaccgatttttttctgcactgtaagggtgcgattctaaaagccaat
tttttcgccgcacataccgtcagttggtaagcCCACTGCCCCCCGgccgt
ttttgcttacgttaatttgtaatttactgcgaatttgtaatttccctcct
agattttgtaatttcccgcaaaagtgacTCTGAAAATGACTCAAAATTAc
tttttgagacctcttttttttagtttcagattgatttccagtgttaaatt
aACGTCTTttagaattgttagaatttcaatccaaaccatgagattaacca
ggaatcccatgcttcttttcgtgaaattctggataaattaccctatcggt
caaattttgaaatttcgttgaactcgagaaatttcaaaaaaattctcaaa
attggCCTCGGGAAATTTATTCCAAATTCCCTCATagccatgagattact
agtacaaaccTCTCTCTCATAGTTACCTGCCAGGATTGTTTGTCATGCCT
CTTTTCTTTTATAGGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAG
AGAGAAGAAGagaatgtttttattcataaACAACTGAAAGATCGAGACGA
ACAACTGAAAAGTGCTTCATCTCTTAACAACAACACTAAATCATCAAGAC
AAGGTATCATAACTTCGTGTATTGTCGACATACATTGTCTGAATTCTTCA
TAGTAACTAACTGGTTTGCAAGTAGTtagagtgatttttttaaacagctt
aagacttggggacacgagaagtttttttcacgttggtgcaatgcaacatg
ctccatcccaccaacacaagaaaaaagtgcatgtctcatggtttctttct
ttatttcatgggacaaaaagtgagggaaatacccaaaagactgATTTTGT
CCCTGAGACAATGgggcaaaattgattcgaatcaattttgttccattgtc
ccagggacaaaaatgagaaaagcacaaatgttattaaaagaaaaatgggg
tggagacacgcgaaagcgtttcaggttggtgggatggagcatgttgcatt
gcaccaatgcGAAAAAtgcttctcgtgtccccaagcctttactcagaaaa
tgtttttttagttttttagaaACGGTACGGTACCCAGTAATGATATTGTT
TTGTGCTCCAGGGAAAGAATTTTCAGACTGCGGGTGACTacgagactgtt
catctaatatttccagaccatctaaaaggaacgacaaataactattaaaa
agcgacaaaaagaacgacaaaccctaaccctgaccctaactatcaaagaa
cacGACATATTTCTCTATTTAAGAGTGAGatggaaacattagatgaacca
gaggaatgtaaagagatggaaaaacagcttttctgattactcaaagttca
acgatcacttctattgaaaattctattgtaaaaacgttgattaggttatt
aaatgaaagtccagaaaagacggctcgccagatctagtatatgacgagcc
gtttttccattgttttcaagaagctgcttttccatctctttacattcctc
tggatAAACAAACTCTTACTACTGGATTTCTATACACAATTCACGGATGA
ATCTGAATGAATTGCTTTTTGATTTCCTCTCATTTGTATGAAATACAGTA
GTAAAATAAAAACTCTATTTTTCTTTGAGAtgtgtagactggagtcgttt
ataatgcatgtaatactaataataccaatactaataataccaatactaat
aataataatacgggatttagtttgtataaacgactggaagaatccggtgt
tccagccttatagatacaggggctaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNagatacaggggctagctacgcagaaacttgcgtagcgagaaaacaat
ttatcaagcaacaacaaactctcaaaacgaaatcaactcaaatgaaaaac
ttttcaatacacaaatccacacatattttttttctcaagaattattttga
gcaggaaaaaattataattgcaatgTATTGACACTTTTCTTTTTTTTGGA
Gttagtgcacaaaggtttctagacgactaaaattgttccattcattactt
tttgctttatttctactatgtataaattagtcgtctagcttgctagacta
tgaGATGTGGGGTCCTAAACTCGGCGAGTGAGCACTTTTCCTCAGTTAGG
TTCAATTATGCTCACgcctttttaaataagaatggtgttttccatttcat
cacggattttcttaactttaagaaaaaataatcctaaattttcatattct
tacggtattcctAGGTTAGAATCCAAATTCATCCTAAATTTAAACATGTA
ATACATACCTGAAGCATAAAATTGTAATTTTGTAAAGGTTTTGAATAAAT
GGAAGGCTGGCAAATTCCATGAcggatgttcttagcttattcttaatttt
ttgttcaatttattcatgaatattcttagagagcacattcttatttaaaa
aaagtgtgttGGAAACCAATTACTTTTAGGTTTGGAAAACAAAATTCACG
TGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAA
GGTACAAGTTACTTCTTTTTTTACCTGGATTGTAGGCCATTCAAAAGCTT
TCGTCGTGTCAgtcattttaattttctttctctgGTACTTGTCAATGGCT
CAGACTTCTGTAATAGTTTTTGTAATATGGTGCTTTCACACTATTTTCAT
CTAAAAGACGTCAGGAAAATTCCTCGAGTGAATTCTCCCTTAGAAAATAC
CCTTAGCCGTGAATTTGCTCAAACCCTGATTTGCCTGACCTTCCAGGCCT
TCTCTCGGATGCCAAATAAACGTATATcttgtttattaattttcatgctt
tttttataaataatttttttagaaGAGCTGCATGGTCTGGACGCTGTAAG
TTGTTTGAttttattcataattttttttttcgaattgcGTCGTTTCCCAA
ATCCCATAATTAATTCCGTTCCGTTTAGGCCATGTGGGAAAATAAACTAA
ATCGTTCTCTTTACTTAAACTAGCttaaaaaataaagacaaaTTTCAAAT
AAGCTAGCCAAGCTTTTATAaccaaatttggtcaatttttaaGGTGCTAA
CACCGAATTCGAATCTTACCAACTTCGAAAACcctttttgctatttttta
ggTATTTAGTCCAAAAACACTCGATTTTAAGggtcttcaaattcaaaaaa
gacaTTTACCAAgcgatagagctcttcaaactaaGCAAAAAATGGACTgc
aataatttttccaaattttttagaTCAGTAGAATTTATTGGTGTTTTTGt
agtgaaaaaatgaaggaaaattgaaagcctttttttaccaaaatccaaaa
aaattacgGGTTATCAAGTGACATGTTAGTCAAGTTATCATGTTGACATT
TGAATTACAAAATAGTACccaaaaattgaccaaaatcgaTTGCAAcggac
aatttgaaaaaaaggaaagGTTTTGAGAAGGCAGGCTTTATTTAGAAGCA
TACAATGAAACAGGGGAATActttaatataaaaaatagggaaagtttttt
tgtaaatttcagaagaaatatcttttgtccccaattaaagtctgtctcaa
tataatcagCAGCGAAGACAAAAAAGTTCTTTGATAGATGTCGAATAAGA
TAGCGTTTTTTtgcttgttggaaagatattgtgGATATTGTATTCCCGGA
GTGTGGAATAtcatcaaaaaaggaaaaattaaaacaaaagggaaatcgaa
gatgaaaagtgaagaagatcattttgagacagactttaactTAAAATCCC
ATTTTATCAGTGCAACTTAAGCCTTTAAGTGCCAAGGTCAtctttttcta
agttttttaaagaaaatcgctagttcaaactttaaaggcttatatctcct
gatctagaaggagttagaagcttgttcatagctcgttggatagcttagag
tccctccccgatttaggaagggcagGGTGGGAGGTggcctgcctgaatga
tagaaaagTGCCCAGTagtaaaaaatacaaactaATTTGCTAgaagacag
aatcaagtaaagcagggccaaatttggaggttcttggatcactcgttgac
caaaaatggtcaaaaaacggtcaaaatcttaaaaaagtggattttgtcaa
atttttgcaattttttgactttttggcttaaaatctagctagaaagactc
acttttgattttttttgcgtgaccgaccatgaagcacaatccaattccta
cgagttagaccaaaaatggacgatttctaactcaaactgggaactacagg
agggcttcgctgTCCTTCATAGCcaatgtctgatatatacgacattggca
cttaaaggatTAAAACAATGGTTGATATGGTGTATATAAGATTGCAAAAT
GGCAAAAAGTTTGATCGTTACTTTTTCCCTACTTATTTCCACAGGGTTTC
TTCGAAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACT
CAACCACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAA
TGAATTTTAAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGAC
ggcaaaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCA
ATTATCCAACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATTG
AATTAATAAGCATTTTTTGCAGTTTTTGTAACTGTAAGTTTTGGCTAGCA
ATACTTTAAGACTTTTCCAGATCTATTCAAAGTATATAATAGTCCTCGTG
GTGAATATGTTGTGAATTTGTTAATATTTTGTGTTTGTGttaattgtaca
aaaaaatcgaaaatcgacctttATAGAGAGACTTTACTGACCGCCAAAAG
GATTGTCCTGTGAGGATATAGCTTAATGGTTCTTGAagtatcaaatattt
ttttaaactacTTTATAAAATATGGTGTTTTATTTGTGAATATATTAATC
aacttttgtaaattttattcTTAAGAAAAGGTCAATTTTGTCAAGAAATT
AGGAATTTTCGTATTTTCAGTGTGATATGTTGTTTGATACTTGATCTGAA
AACGATCATGGTCTGCGATCcttcatgaaaataaaaaatggaagATCCTA
GAAGA

Coding sequence (CDS) from alignment at scaffold_86:303265..313069+

>TCONS_00072855 ID=TCONS_00072855|Name=TCONS_00072855|organism=Clytia hemisphaerica|type=CDS|length=6984bp|location=Sequence derived from alignment at scaffold_86:303265..313069+ (Clytia hemisphaerica)
ATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGAC
TGCGGAGAATGAAGTTTTGAACAACAAATACAACAAACTGAAACGAAAGT
ATAAAGAATTATACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGT
ATTGAAATACATGAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACA
GCATCAAGGCAAATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAG
CTGACAAAACCAATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTG
GTGAGTCTATATGACAATTTAATGAAAAGATATGAAATCGAAATAAAACT
CAATCGAAATCAAACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGA
AATTGAAAGATGATATTTTCAAGAGAGAAGAAGagaatgtttttattcat
aaACAACTGAAAGATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAA
CAACAACACTAAATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGC
TAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaa
GAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAA
ATACGCATTGCATCAGTCCAATAGACTCAACCACCAATATGAACGAACTC
TAAAGAAATTGTGTAAACAGACAGGAATGAATTTTAAACATTTGATGGCG
GTGTCAACTTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCC
AACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGAC
AATCAAACCTACCAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCC
TTCCATGTTTGCCAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAA
ATACAACAAACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAG
AAGTGAAAGAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGT
CTTCAAAATGAGATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGT
CCTTCAACAACAAAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAG
AGGATAATAACGCTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAA
AGATATGAAATCGAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAA
AAAGCTTgagGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAG
AAGAAGagaatgtttttattcataaACAACTGAAAGATCGAGACGAACAA
CTGAAAAGTGCTTCATCTCTTAACAACAACACTAAATCATCAAGACAAGG
TTTGGAAAACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAATGA
AAGAAAATTCTAGATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTC
TTCGAAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACT
CAACCACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAA
TGAATTTTAAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGAC
ggcaaaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCA
ATTATCCAACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATGA
CAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCG
GAGAATGAAGTTTTGAACAACAAATACAACAAACTGAAACGAAAGTATAA
AGAATTATACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTATTG
AAATACATGAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACAGCAT
CAAGGCAAATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAGCTGA
CAAAACCAATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTGGTGA
GTCTATATGACAATTTAATGAAAAGATATGAAATCGAAATAAAACTCAAT
CGAAATCAAACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGAAATT
GAAAGATGATATTTTCAAGAGAGAAGAAGagaatgtttttattcataaAC
AACTGAAAGATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAACAAC
AACACTAAATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGCTAAC
CAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaaGAGC
TGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAAATAC
GCATTGCATCAGTCCAATAGACTCAACCACCAATATGAACGAACTCTAAA
GAAATTGTGTAAACAGACAGGAATGAATTTTAAACATTTGATGGCGGTGT
CAACTTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCCAACA
GCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACAATC
AAACCTACCAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCCTTCC
ATGTTTGCCAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATAC
AACAAACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGT
GAAAGAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTC
AAAATGAGATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTT
CAACAACAAAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGA
TAATAACGCTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGAT
ATGAAATCGAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAG
CTTgagGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGA
AGagaatgtttttattcataaACAACTGAAAGATCGAGACGAACAACTGA
AAAGTGCTTCATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTG
GAAAACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGA
AAATTCTAGATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCG
AAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACTCAAC
CACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAA
TTTTAAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggca
aaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTA
TCCAACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATGACAGG
AATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCGGAGA
ATGAAGTTTTGAACAACAAATACAACAAACTGAAACGAAAGTATAAAGAA
TTATACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTATTGAAAT
ACATGAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACAGCATCAAG
GCAAATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAGCTGACAAA
ACCAATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTGGTGAGTCT
ATATGACAATTTAATGAAAAGATATGAAATCGAAATAAAACTCAATCGAA
ATCAAACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGAAATTGAAA
GATGATATTTTCAAGAGAGAAGAAGagaatgtttttattcataaACAACT
GAAAGATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAACAACAACA
CTAAATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGCTAACCAAA
GACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaaGAGCTGCA
TGGTCTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAAATACGCAT
TGCATCAGTCCAATAGACTCAACCACCAATATGAACGAACTCTAAAGAAA
TTGTGTAAACAGACAGGAATGAATTTTAAACATTTGATGGCGGTGTCAAC
TTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCCAACAGCCA
CTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACAATCAAAC
CTACCAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCCTTCCATGT
TTGCCAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATACAACA
AACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGTGAAA
GAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTCAAAA
TGAGATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTTCAAC
AACAAAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGATAAT
AACGCTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGATATGA
AATCGAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAGCTTg
agGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGAAGag
aatgtttttattcataaACAACTGAAAGATCGAGACGAACAACTGAAAAG
TGCTTCATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTGGAAA
ACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAAT
TCTAGATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGA
ATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACTCAACCACC
AATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAATTTT
AAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggcaaaag
aaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTATCCA
ACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATGACAGGAATC
GGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCGGAGAATGA
AGTTTTGAACAACAAATACAACAAACTGAAACGAAAGTATAAAGAATTAT
ACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTATTGAAATACAT
GAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACAGCATCAAGGCAA
ATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAGCTGACAAAACCA
ATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTGGTGAGTCTATAT
GACAATTTAATGAAAAGATATGAAATCGAAATAAAACTCAATCGAAATCA
AACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGAAATTGAAAGATG
ATATTTTCAAGAGAGAAGAAGagaatgtttttattcataaACAACTGAAA
GATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAACAACAACACTAA
ATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGCTAACCAAAGACA
GAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaaGAGCTGCATGGT
CTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAAATACGCATTGCA
TCAGTCCAATAGACTCAACCACCAATATGAACGAACTCTAAAGAAATTGT
GTAAACAGACAGGAATGAATTTTAAACATTTGATGGCGGTGTCAACTTCG
GCACAGACGTCTGACggcaaaagaaaatcttcaacaCCAACAGCCACTTC
ATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACAATCAAACCTAC
CAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGC
CAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATACAACAAACT
GAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGTGAAAGAAA
AGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTCAAAATGAG
ATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTTCAACAACA
AAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGATAATAACG
CTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGATATGAAATC
GAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAGCTTgagGC
TGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGAAGagaatg
tttttattcataaACAACTGAAAGATCGAGACGAACAACTGAAAAGTGCT
TCATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTGGAAAACAA
AATTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTA
GATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTA
GAAGATATGAAATACGCATTGCATCAGTCCAATAGACTCAACCACCAATA
TGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAATTTTAAAC
ATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggcaaaagaaaa
tcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAG
AAAATCGAGACAATCAAACCTACCAAAATCCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045217XLOC_045217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072855-exon-scaffold_86-1491911889:303265..303368TCONS_00072855-exon-scaffold_86-1491911889:303265..303368Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:303265..303368TCONS_00072855-exon-scaffold_86-1510915933:303265..303368Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:303265..303368TCONS_00072855-exon-scaffold_86-1575043694:303265..303368Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:305681..305817TCONS_00072855-exon-scaffold_86-1491911889:305681..305817Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:305681..305817TCONS_00072855-exon-scaffold_86-1510915933:305681..305817Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:305681..305817TCONS_00072855-exon-scaffold_86-1575043694:305681..305817Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:306276..306389TCONS_00072855-exon-scaffold_86-1491911889:306276..306389Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:306276..306389TCONS_00072855-exon-scaffold_86-1510915933:306276..306389Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:306276..306389TCONS_00072855-exon-scaffold_86-1575043694:306276..306389Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:306540..306630TCONS_00072855-exon-scaffold_86-1491911889:306540..306630Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:306540..306630TCONS_00072855-exon-scaffold_86-1510915933:306540..306630Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:306540..306630TCONS_00072855-exon-scaffold_86-1575043694:306540..306630Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:308329..308467TCONS_00072855-exon-scaffold_86-1491911889:308329..308467Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:308329..308467TCONS_00072855-exon-scaffold_86-1510915933:308329..308467Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:308329..308467TCONS_00072855-exon-scaffold_86-1575043694:308329..308467Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:310394..310465TCONS_00072855-exon-scaffold_86-1491911889:310394..310465Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:310394..310465TCONS_00072855-exon-scaffold_86-1510915933:310394..310465Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:310394..310465TCONS_00072855-exon-scaffold_86-1575043694:310394..310465Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:310787..310809TCONS_00072855-exon-scaffold_86-1491911889:310787..310809Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:310787..310809TCONS_00072855-exon-scaffold_86-1510915933:310787..310809Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:310787..310809TCONS_00072855-exon-scaffold_86-1575043694:310787..310809Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:312359..313069TCONS_00072855-exon-scaffold_86-1491911889:312359..313069Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:312359..313069TCONS_00072855-exon-scaffold_86-1510915933:312359..313069Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:312359..313069TCONS_00072855-exon-scaffold_86-1575043694:312359..313069Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072855-proteinTCONS_00072855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:303265..313069 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.62118	1.50419	6.35508	5.31919	3.89287	3.10272	5.42647	4.62179	2.78224	2.60035	1.56269	1.0273	1.02588	0	2.09114	3.29225	3.56008	3.69516	1.46672	0	0	0	3.53709	5.31894	6.34821	8.31186	0	0	0	3.26094
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072855 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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