TCONS_00072855 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072855
Unique NameTCONS_00072855
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072855 ID=TCONS_00072855|Name=TCONS_00072855|organism=Clytia hemisphaerica|type=transcript|length=1391bp
tcttcatattttcatttagaagtaaataaagtaaacaaaaaaaattaaag
aatacATCAATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCA
GTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATACAACAAACTGA
AACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGTGAAAGAAAAG
TTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTCAAAATGAGAT
GACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTTCAACAACAAA
AGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGATAATAACGCT
GCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGATATGAAATCGA
AATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAGCTTgagGCTG
AAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGAAGagaatgtt
tttattcataaACAACTGAAAGATCGAGACGAACAACTGAAAAGTGCTTC
ATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTGGAAAACAAAA
TTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGA
TTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTAGA
AGATATGAAATACGCATTGCATCAGTCCAATAGACTCAACCACCAATATG
AACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAATTTTAAACAT
TTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggcaaaagaaaatc
ttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAA
AATCGAGACAATCAAACCTACCAAAATCCTAAATTGAATTAATAAGCATT
TTTTGCAGTTTTTGTAACTGTAAGTTTTGGCTAGCAATACTTTAAGACTT
TTCCAGATCTATTCAAAGTATATAATAGTCCTCGTGGTGAATATGTTGTG
AATTTGTTAATATTTTGTGTTTGTGttaattgtacaaaaaaatcgaaaat
cgacctttATAGAGAGACTTTACTGACCGCCAAAAGGATTGTCCTGTGAG
GATATAGCTTAATGGTTCTTGAagtatcaaatatttttttaaactacTTT
ATAAAATATGGTGTTTTATTTGTGAATATATTAATCaacttttgtaaatt
ttattcTTAAGAAAAGGTCAATTTTGTCAAGAAATTAGGAATTTTCGTAT
TTTCAGTGTGATATGTTGTTTGATACTTGATCTGAAAACGATCATGGTCT
GCGATCcttcatgaaaataaaaaatggaagATCCTAGAAGA
Run BLAST on NCBI

protein sequence of TCONS_00072855-protein

>TCONS_00072855-protein ID=TCONS_00072855-protein|Name=TCONS_00072855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MTGIGDIPPFHVCQSLTAENEVLNNKYNKLKRKYKELYQEMLEVKEKLIR
IEIHEEYKGLQNEMTEQHQGKYKKKVLQQQKTIADKTNRNKEEDNNAAKL
VSLYDNLMKRYEIEIKLNRNQTKKIKKLEAEKEKLKDDIFKREEENVFIH
KQLKDRDEQLKSASSLNNNTKSSRQGLENKIHVLTKDRERLMKENSRLKE
ELHGLDAGFFEELEDMKYALHQSNRLNHQYERTLKKLCKQTGMNFKHLMA
VSTSAQTSDGKRKSSTPTATSSSVGQLSNRKSRQSNLPKS
Run BLAST on NCBI

transcript from alignment at scaffold_86:303265..313069+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072855 ID=TCONS_00072855|Name=TCONS_00072855|organism=Clytia hemisphaerica|type=transcript|length=9805bp|location=Sequence derived from alignment at scaffold_86:303265..313069+ (Clytia hemisphaerica)
tcttcatattttcatttagaagtaaataaagtaaacaaaaaaaattaaag aatacATCAATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCA GTCGGtaagttttcaagaaaatattttttaaatttgaaagacCCTGTAAT TCACACAGAATTATGATTATGATTTCTTTTAaagtacagcacctgacccc gagaatgtaggtgaaatttgaatcagacctgaaagatgtagatttgcatt ttaaaagatattaaatattttcaacgaaattttgaactctcaaaatcctt tcccaggggttggtttcattacttttgatagatagaccaattttttttat ccttgaagttgactcccatttttgttatagcccccagaatgtaggtttgg tcttatggctttaaatctagtaatagtaaaatgttgatattttttcaatt ggattaattctaacagcaaattttagaaatgttttatgcgaaaacaatat tctaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNaggacgaaaagaagagacaagaaagtt gtttttattttgtaggttgaaaattttgtgttgaaatatgtgaataatgt aacaacacccctgcctcgcagccctggtggaactttttcccacatcgggt ccaaaaatttctacttaagtcccaatttgaatataaattctattgctcca aacttaggcaaattttctgattgggctggggccccaacgggtctgggaca cgtcgtaaaagctcaaaatttcaacattaatcatctctcaggtagtactt tcatgttataaaagtacaacaaacaagttttatataatttgacagactta aAATGTCGGGTTATAAAGAcccccaaattgtaggtcaactaaccccaaaa gttaggtcaaacattttcgtcaaaatatccaACTCAGAAcagtaaatatt gaaatggactattttccccaattccttagttcattaggactaagaaaata ccctatcatcataacttaattccaatagatttcgatttagagaggattta tttaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNcaaatttttatgaagttgaactatcgttagggctacaatgcta aaaaatgagaaacctacattctcggggtttactacattctcggggtcagg tgctgtagtAATACTATTGATTTCTACATCGCTTCTTAATAAAAGACTTG AAGTGTGTAGGAATCTTTCCATCTCATTCAACCCGGTCGTGAATCGCCAC CAAGTTCTACTAAAGCATGGGTAAAGCATAGGTTTATTGAAGTGATTGCT TCCATTAATATTCTATCAATCATTTGGTTTTTCTATTTAATATCTAAGTA GGGCTGGCGGCTGGCGATTTTTTTCGAACCAAAAACAATTCTTGAAATTG TTCGGAtatcccctggaaaatggcaaaatttgcaaaaaaaggaaatataG GCAGGCAATTCTTAGTTATGAAAGCCCTCGAAAAAACATACGATTCATAA TTGAAACTGTCTGTAGCCTGTCCCACCCCTACCACGGAGGATTTTTGCAT TCTTTGGAAAAATCTTGCTGTGTGAGGCAATTCAAGGTTTTTTATCTGCA AGAGCTTGGTAGCGGCTAGTTATCAGGTTACCTTCGTTGAATACCAATGT CCCGTTACTTTACCAGCTGACTGCGGAGAATGAAGTTTTGAACAACAAAT ACAACAAACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAA GTGAAAGAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCT TCAGTAAGTATCTTCGTGTTCGTCTACACAAGGTCACTTTTTGGTATATT GCAGTTGAACACCATTTAAAGAGTGCTCGATAACTGTGTAGAGcaaattc atattttttttcaaaatttcgctGTTAAAGAAAGTACATTACTTCAAGTT TTATGTTTTACGGCAATCATCAGACGtacaaataaaaacttttttctatt ttatttgtaCGTCTGATGATTGCCGTAAGGCATGGAACTTGAATTAATGT ACTTTCTTAATagcgaaattttgaaataaaaatagatatacagttgacgc tctctaattcgatcttcaaggggaattggattttcatcgaataagggagc tcgTCGAATAAAAGAGCGTTGTTTATGAGGGTTtctcgaataagggagcc tattgagtagtagaacgtcgaataagagagcatcaactgtatttGTCGGT CTGTTTCGTAGAAATGAGATGACTGAACAGCATCAAGGCAAATACAAGAA GAAAGTCCTTCAACAACAAAAGACTATAGCTGACAAAACCAATCGAAACA AAGAAGAGGATAATAACGCTGCAAAGTAAGGACCACTTAATGACTTAATA TCCCCTTCGAAAAATATACTGGTTtaatagaggtttttcatgtttgGGTA AATTACGTAATTTCCGGTACCTTCTGTGTGTGCCCTAGACTTAATAAGAA TGTTTTTAAGTCATTTTCTTTATAGATTGGTGAGTCTATATGACAATTTA ATGAAAAGATATGAAATCGAAATAAAACTCAATCGAAATCAAACGAAAAA GATCAAAAAGCTTgaggtaaactttttttttttctgtcatttttttcgAT TGATTTTTGCGCTGCCAGCCTCTTGAGTTTTTCACGAAACATtataatcg ttttttttttataatttcgtACACAAAACGAAATTGTTCGATGTCatgta aaaacaattttattaatGTTTACTAACCCTATGGCTCTCCAATGCTTAAT AGTTGGCAATCGCTTTTTTGctcttaaaaatattctttttataaTACAGA AATGAGGCGCGTctcttatgctgacaaagcagaactAACTatagaatttc tcaaaatttgtgtattcatgatatgcaacactggagagtcttctgagaat tttcaaaaagttcaacccaatacgtcacttaaacaatggaaaaagtgacg tattgggtggaacttttttaaaattctcagaagactctccagtgttgcat atcatgaataatcaGGTATGGTCTAACTTTGTGCTTGCGCAGCGCGGGag atagactagtaaactagtcgttgaaaacagacccatatacaaaaaattca agctccaaataaaaagaatcgaagaggtgaggttgcgtgtcttttctgaa tttcaacgactagaagcttcttccctcaaaaaacgttgtttaattttaca acattttttaggtttttgagaatccatccaacttttttgactaaaatgat atttcatagtaacattaaacatgggactcacgcgcgctgaatattttatt agtgtttacattatttgattgacagttttattataagtaataaccgacta gtttactagtctacgcGGGAGAGGGAAAAactgttctttcttttgtttaa tgcTGCTATGTAAGCAAAGGTTAAGAGATACGCTAAATGATGTCCTTTTt aaatctcatggttgattgaaattcgattgacgtttttgcctggggggggg ggggggcagtcaggcaaattgaccgacgggtatgtgcggcggttaagggt atgtttttcaaaacatcaggaatgcactgtaagggtggacttttgataaa tgcactgtaagggtggacttttgataaatgcactgtaagggtggaaattt cagcaaacctgggaaaaattgcaaatttttgctcgaaaatcttgattttt tttgctctaaaagagtttaaaatttgaaaaaatgcattgtaagggtatga atttcaccgatttttttctgcactgtaagggtgcgattctaaaagccaat tttttcgccgcacataccgtcagttggtaagcCCACTGCCCCCCGgccgt ttttgcttacgttaatttgtaatttactgcgaatttgtaatttccctcct agattttgtaatttcccgcaaaagtgacTCTGAAAATGACTCAAAATTAc tttttgagacctcttttttttagtttcagattgatttccagtgttaaatt aACGTCTTttagaattgttagaatttcaatccaaaccatgagattaacca ggaatcccatgcttcttttcgtgaaattctggataaattaccctatcggt caaattttgaaatttcgttgaactcgagaaatttcaaaaaaattctcaaa attggCCTCGGGAAATTTATTCCAAATTCCCTCATagccatgagattact agtacaaaccTCTCTCTCATAGTTACCTGCCAGGATTGTTTGTCATGCCT CTTTTCTTTTATAGGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAG AGAGAAGAAGagaatgtttttattcataaACAACTGAAAGATCGAGACGA ACAACTGAAAAGTGCTTCATCTCTTAACAACAACACTAAATCATCAAGAC AAGGTATCATAACTTCGTGTATTGTCGACATACATTGTCTGAATTCTTCA TAGTAACTAACTGGTTTGCAAGTAGTtagagtgatttttttaaacagctt aagacttggggacacgagaagtttttttcacgttggtgcaatgcaacatg ctccatcccaccaacacaagaaaaaagtgcatgtctcatggtttctttct ttatttcatgggacaaaaagtgagggaaatacccaaaagactgATTTTGT CCCTGAGACAATGgggcaaaattgattcgaatcaattttgttccattgtc ccagggacaaaaatgagaaaagcacaaatgttattaaaagaaaaatgggg tggagacacgcgaaagcgtttcaggttggtgggatggagcatgttgcatt gcaccaatgcGAAAAAtgcttctcgtgtccccaagcctttactcagaaaa tgtttttttagttttttagaaACGGTACGGTACCCAGTAATGATATTGTT TTGTGCTCCAGGGAAAGAATTTTCAGACTGCGGGTGACTacgagactgtt catctaatatttccagaccatctaaaaggaacgacaaataactattaaaa agcgacaaaaagaacgacaaaccctaaccctgaccctaactatcaaagaa cacGACATATTTCTCTATTTAAGAGTGAGatggaaacattagatgaacca gaggaatgtaaagagatggaaaaacagcttttctgattactcaaagttca acgatcacttctattgaaaattctattgtaaaaacgttgattaggttatt aaatgaaagtccagaaaagacggctcgccagatctagtatatgacgagcc gtttttccattgttttcaagaagctgcttttccatctctttacattcctc tggatAAACAAACTCTTACTACTGGATTTCTATACACAATTCACGGATGA ATCTGAATGAATTGCTTTTTGATTTCCTCTCATTTGTATGAAATACAGTA GTAAAATAAAAACTCTATTTTTCTTTGAGAtgtgtagactggagtcgttt ataatgcatgtaatactaataataccaatactaataataccaatactaat aataataatacgggatttagtttgtataaacgactggaagaatccggtgt tccagccttatagatacaggggctaNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNagatacaggggctagctacgcagaaacttgcgtagcgagaaaacaat ttatcaagcaacaacaaactctcaaaacgaaatcaactcaaatgaaaaac ttttcaatacacaaatccacacatattttttttctcaagaattattttga gcaggaaaaaattataattgcaatgTATTGACACTTTTCTTTTTTTTGGA Gttagtgcacaaaggtttctagacgactaaaattgttccattcattactt tttgctttatttctactatgtataaattagtcgtctagcttgctagacta tgaGATGTGGGGTCCTAAACTCGGCGAGTGAGCACTTTTCCTCAGTTAGG TTCAATTATGCTCACgcctttttaaataagaatggtgttttccatttcat cacggattttcttaactttaagaaaaaataatcctaaattttcatattct tacggtattcctAGGTTAGAATCCAAATTCATCCTAAATTTAAACATGTA ATACATACCTGAAGCATAAAATTGTAATTTTGTAAAGGTTTTGAATAAAT GGAAGGCTGGCAAATTCCATGAcggatgttcttagcttattcttaatttt ttgttcaatttattcatgaatattcttagagagcacattcttatttaaaa aaagtgtgttGGAAACCAATTACTTTTAGGTTTGGAAAACAAAATTCACG TGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAA GGTACAAGTTACTTCTTTTTTTACCTGGATTGTAGGCCATTCAAAAGCTT TCGTCGTGTCAgtcattttaattttctttctctgGTACTTGTCAATGGCT CAGACTTCTGTAATAGTTTTTGTAATATGGTGCTTTCACACTATTTTCAT CTAAAAGACGTCAGGAAAATTCCTCGAGTGAATTCTCCCTTAGAAAATAC CCTTAGCCGTGAATTTGCTCAAACCCTGATTTGCCTGACCTTCCAGGCCT TCTCTCGGATGCCAAATAAACGTATATcttgtttattaattttcatgctt tttttataaataatttttttagaaGAGCTGCATGGTCTGGACGCTGTAAG TTGTTTGAttttattcataattttttttttcgaattgcGTCGTTTCCCAA ATCCCATAATTAATTCCGTTCCGTTTAGGCCATGTGGGAAAATAAACTAA ATCGTTCTCTTTACTTAAACTAGCttaaaaaataaagacaaaTTTCAAAT AAGCTAGCCAAGCTTTTATAaccaaatttggtcaatttttaaGGTGCTAA CACCGAATTCGAATCTTACCAACTTCGAAAACcctttttgctatttttta ggTATTTAGTCCAAAAACACTCGATTTTAAGggtcttcaaattcaaaaaa gacaTTTACCAAgcgatagagctcttcaaactaaGCAAAAAATGGACTgc aataatttttccaaattttttagaTCAGTAGAATTTATTGGTGTTTTTGt agtgaaaaaatgaaggaaaattgaaagcctttttttaccaaaatccaaaa aaattacgGGTTATCAAGTGACATGTTAGTCAAGTTATCATGTTGACATT TGAATTACAAAATAGTACccaaaaattgaccaaaatcgaTTGCAAcggac aatttgaaaaaaaggaaagGTTTTGAGAAGGCAGGCTTTATTTAGAAGCA TACAATGAAACAGGGGAATActttaatataaaaaatagggaaagtttttt tgtaaatttcagaagaaatatcttttgtccccaattaaagtctgtctcaa tataatcagCAGCGAAGACAAAAAAGTTCTTTGATAGATGTCGAATAAGA TAGCGTTTTTTtgcttgttggaaagatattgtgGATATTGTATTCCCGGA GTGTGGAATAtcatcaaaaaaggaaaaattaaaacaaaagggaaatcgaa gatgaaaagtgaagaagatcattttgagacagactttaactTAAAATCCC ATTTTATCAGTGCAACTTAAGCCTTTAAGTGCCAAGGTCAtctttttcta agttttttaaagaaaatcgctagttcaaactttaaaggcttatatctcct gatctagaaggagttagaagcttgttcatagctcgttggatagcttagag tccctccccgatttaggaagggcagGGTGGGAGGTggcctgcctgaatga tagaaaagTGCCCAGTagtaaaaaatacaaactaATTTGCTAgaagacag aatcaagtaaagcagggccaaatttggaggttcttggatcactcgttgac caaaaatggtcaaaaaacggtcaaaatcttaaaaaagtggattttgtcaa atttttgcaattttttgactttttggcttaaaatctagctagaaagactc acttttgattttttttgcgtgaccgaccatgaagcacaatccaattccta cgagttagaccaaaaatggacgatttctaactcaaactgggaactacagg agggcttcgctgTCCTTCATAGCcaatgtctgatatatacgacattggca cttaaaggatTAAAACAATGGTTGATATGGTGTATATAAGATTGCAAAAT GGCAAAAAGTTTGATCGTTACTTTTTCCCTACTTATTTCCACAGGGTTTC TTCGAAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACT CAACCACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAA TGAATTTTAAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGAC ggcaaaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCA ATTATCCAACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATTG AATTAATAAGCATTTTTTGCAGTTTTTGTAACTGTAAGTTTTGGCTAGCA ATACTTTAAGACTTTTCCAGATCTATTCAAAGTATATAATAGTCCTCGTG GTGAATATGTTGTGAATTTGTTAATATTTTGTGTTTGTGttaattgtaca aaaaaatcgaaaatcgacctttATAGAGAGACTTTACTGACCGCCAAAAG GATTGTCCTGTGAGGATATAGCTTAATGGTTCTTGAagtatcaaatattt ttttaaactacTTTATAAAATATGGTGTTTTATTTGTGAATATATTAATC aacttttgtaaattttattcTTAAGAAAAGGTCAATTTTGTCAAGAAATT AGGAATTTTCGTATTTTCAGTGTGATATGTTGTTTGATACTTGATCTGAA AACGATCATGGTCTGCGATCcttcatgaaaataaaaaatggaagATCCTA GAAGA

Coding sequence (CDS) from alignment at scaffold_86:303265..313069+

>TCONS_00072855 ID=TCONS_00072855|Name=TCONS_00072855|organism=Clytia hemisphaerica|type=CDS|length=6984bp|location=Sequence derived from alignment at scaffold_86:303265..313069+ (Clytia hemisphaerica)
ATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGAC
TGCGGAGAATGAAGTTTTGAACAACAAATACAACAAACTGAAACGAAAGT
ATAAAGAATTATACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGT
ATTGAAATACATGAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACA
GCATCAAGGCAAATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAG
CTGACAAAACCAATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTG
GTGAGTCTATATGACAATTTAATGAAAAGATATGAAATCGAAATAAAACT
CAATCGAAATCAAACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGA
AATTGAAAGATGATATTTTCAAGAGAGAAGAAGagaatgtttttattcat
aaACAACTGAAAGATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAA
CAACAACACTAAATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGC
TAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaa
GAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAA
ATACGCATTGCATCAGTCCAATAGACTCAACCACCAATATGAACGAACTC
TAAAGAAATTGTGTAAACAGACAGGAATGAATTTTAAACATTTGATGGCG
GTGTCAACTTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCC
AACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGAC
AATCAAACCTACCAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCC
TTCCATGTTTGCCAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAA
ATACAACAAACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAG
AAGTGAAAGAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGT
CTTCAAAATGAGATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGT
CCTTCAACAACAAAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAG
AGGATAATAACGCTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAA
AGATATGAAATCGAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAA
AAAGCTTgagGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAG
AAGAAGagaatgtttttattcataaACAACTGAAAGATCGAGACGAACAA
CTGAAAAGTGCTTCATCTCTTAACAACAACACTAAATCATCAAGACAAGG
TTTGGAAAACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAATGA
AAGAAAATTCTAGATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTC
TTCGAAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACT
CAACCACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAA
TGAATTTTAAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGAC
ggcaaaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCA
ATTATCCAACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATGA
CAGGAATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCG
GAGAATGAAGTTTTGAACAACAAATACAACAAACTGAAACGAAAGTATAA
AGAATTATACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTATTG
AAATACATGAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACAGCAT
CAAGGCAAATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAGCTGA
CAAAACCAATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTGGTGA
GTCTATATGACAATTTAATGAAAAGATATGAAATCGAAATAAAACTCAAT
CGAAATCAAACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGAAATT
GAAAGATGATATTTTCAAGAGAGAAGAAGagaatgtttttattcataaAC
AACTGAAAGATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAACAAC
AACACTAAATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGCTAAC
CAAAGACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaaGAGC
TGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAAATAC
GCATTGCATCAGTCCAATAGACTCAACCACCAATATGAACGAACTCTAAA
GAAATTGTGTAAACAGACAGGAATGAATTTTAAACATTTGATGGCGGTGT
CAACTTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCCAACA
GCCACTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACAATC
AAACCTACCAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCCTTCC
ATGTTTGCCAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATAC
AACAAACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGT
GAAAGAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTC
AAAATGAGATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTT
CAACAACAAAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGA
TAATAACGCTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGAT
ATGAAATCGAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAG
CTTgagGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGA
AGagaatgtttttattcataaACAACTGAAAGATCGAGACGAACAACTGA
AAAGTGCTTCATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTG
GAAAACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGA
AAATTCTAGATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCG
AAGAATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACTCAAC
CACCAATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAA
TTTTAAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggca
aaagaaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTA
TCCAACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATGACAGG
AATCGGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCGGAGA
ATGAAGTTTTGAACAACAAATACAACAAACTGAAACGAAAGTATAAAGAA
TTATACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTATTGAAAT
ACATGAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACAGCATCAAG
GCAAATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAGCTGACAAA
ACCAATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTGGTGAGTCT
ATATGACAATTTAATGAAAAGATATGAAATCGAAATAAAACTCAATCGAA
ATCAAACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGAAATTGAAA
GATGATATTTTCAAGAGAGAAGAAGagaatgtttttattcataaACAACT
GAAAGATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAACAACAACA
CTAAATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGCTAACCAAA
GACAGAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaaGAGCTGCA
TGGTCTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAAATACGCAT
TGCATCAGTCCAATAGACTCAACCACCAATATGAACGAACTCTAAAGAAA
TTGTGTAAACAGACAGGAATGAATTTTAAACATTTGATGGCGGTGTCAAC
TTCGGCACAGACGTCTGACggcaaaagaaaatcttcaacaCCAACAGCCA
CTTCATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACAATCAAAC
CTACCAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCCTTCCATGT
TTGCCAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATACAACA
AACTGAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGTGAAA
GAAAAGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTCAAAA
TGAGATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTTCAAC
AACAAAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGATAAT
AACGCTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGATATGA
AATCGAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAGCTTg
agGCTGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGAAGag
aatgtttttattcataaACAACTGAAAGATCGAGACGAACAACTGAAAAG
TGCTTCATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTGGAAA
ACAAAATTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAAT
TCTAGATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGA
ATTAGAAGATATGAAATACGCATTGCATCAGTCCAATAGACTCAACCACC
AATATGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAATTTT
AAACATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggcaaaag
aaaatcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTATCCA
ACAGAAAATCGAGACAATCAAACCTACCAAAATCCTAAATGACAGGAATC
GGCGACATCCCTCCCTTCCATGTTTGCCAGTCGCTGACTGCGGAGAATGA
AGTTTTGAACAACAAATACAACAAACTGAAACGAAAGTATAAAGAATTAT
ACCAAGAAATGTTAGAAGTGAAAGAAAAGTTGATTCGTATTGAAATACAT
GAAGAATACAAAGGTCTTCAAAATGAGATGACTGAACAGCATCAAGGCAA
ATACAAGAAGAAAGTCCTTCAACAACAAAAGACTATAGCTGACAAAACCA
ATCGAAACAAAGAAGAGGATAATAACGCTGCAAAATTGGTGAGTCTATAT
GACAATTTAATGAAAAGATATGAAATCGAAATAAAACTCAATCGAAATCA
AACGAAAAAGATCAAAAAGCTTgagGCTGAAAAGGAGAAATTGAAAGATG
ATATTTTCAAGAGAGAAGAAGagaatgtttttattcataaACAACTGAAA
GATCGAGACGAACAACTGAAAAGTGCTTCATCTCTTAACAACAACACTAA
ATCATCAAGACAAGGTTTGGAAAACAAAATTCACGTGCTAACCAAAGACA
GAGAACGATTAATGAAAGAAAATTCTAGATTGAAAGaaGAGCTGCATGGT
CTGGACGCTGGTTTCTTCGAAGAATTAGAAGATATGAAATACGCATTGCA
TCAGTCCAATAGACTCAACCACCAATATGAACGAACTCTAAAGAAATTGT
GTAAACAGACAGGAATGAATTTTAAACATTTGATGGCGGTGTCAACTTCG
GCACAGACGTCTGACggcaaaagaaaatcttcaacaCCAACAGCCACTTC
ATCAAGTGTCGGTCAATTATCCAACAGAAAATCGAGACAATCAAACCTAC
CAAAATCCTAAATGACAGGAATCGGCGACATCCCTCCCTTCCATGTTTGC
CAGTCGCTGACTGCGGAGAATGAAGTTTTGAACAACAAATACAACAAACT
GAAACGAAAGTATAAAGAATTATACCAAGAAATGTTAGAAGTGAAAGAAA
AGTTGATTCGTATTGAAATACATGAAGAATACAAAGGTCTTCAAAATGAG
ATGACTGAACAGCATCAAGGCAAATACAAGAAGAAAGTCCTTCAACAACA
AAAGACTATAGCTGACAAAACCAATCGAAACAAAGAAGAGGATAATAACG
CTGCAAAATTGGTGAGTCTATATGACAATTTAATGAAAAGATATGAAATC
GAAATAAAACTCAATCGAAATCAAACGAAAAAGATCAAAAAGCTTgagGC
TGAAAAGGAGAAATTGAAAGATGATATTTTCAAGAGAGAAGAAGagaatg
tttttattcataaACAACTGAAAGATCGAGACGAACAACTGAAAAGTGCT
TCATCTCTTAACAACAACACTAAATCATCAAGACAAGGTTTGGAAAACAA
AATTCACGTGCTAACCAAAGACAGAGAACGATTAATGAAAGAAAATTCTA
GATTGAAAGaaGAGCTGCATGGTCTGGACGCTGGTTTCTTCGAAGAATTA
GAAGATATGAAATACGCATTGCATCAGTCCAATAGACTCAACCACCAATA
TGAACGAACTCTAAAGAAATTGTGTAAACAGACAGGAATGAATTTTAAAC
ATTTGATGGCGGTGTCAACTTCGGCACAGACGTCTGACggcaaaagaaaa
tcttcaacaCCAACAGCCACTTCATCAAGTGTCGGTCAATTATCCAACAG
AAAATCGAGACAATCAAACCTACCAAAATCCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045217XLOC_045217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072855-exon-scaffold_86-1491911889:303265..303368TCONS_00072855-exon-scaffold_86-1491911889:303265..303368Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:303265..303368TCONS_00072855-exon-scaffold_86-1510915933:303265..303368Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:303265..303368TCONS_00072855-exon-scaffold_86-1575043694:303265..303368Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:305681..305817TCONS_00072855-exon-scaffold_86-1491911889:305681..305817Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:305681..305817TCONS_00072855-exon-scaffold_86-1510915933:305681..305817Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:305681..305817TCONS_00072855-exon-scaffold_86-1575043694:305681..305817Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:306276..306389TCONS_00072855-exon-scaffold_86-1491911889:306276..306389Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:306276..306389TCONS_00072855-exon-scaffold_86-1510915933:306276..306389Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:306276..306389TCONS_00072855-exon-scaffold_86-1575043694:306276..306389Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:306540..306630TCONS_00072855-exon-scaffold_86-1491911889:306540..306630Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:306540..306630TCONS_00072855-exon-scaffold_86-1510915933:306540..306630Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:306540..306630TCONS_00072855-exon-scaffold_86-1575043694:306540..306630Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:308329..308467TCONS_00072855-exon-scaffold_86-1491911889:308329..308467Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:308329..308467TCONS_00072855-exon-scaffold_86-1510915933:308329..308467Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:308329..308467TCONS_00072855-exon-scaffold_86-1575043694:308329..308467Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:310394..310465TCONS_00072855-exon-scaffold_86-1491911889:310394..310465Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:310394..310465TCONS_00072855-exon-scaffold_86-1510915933:310394..310465Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:310394..310465TCONS_00072855-exon-scaffold_86-1575043694:310394..310465Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:310787..310809TCONS_00072855-exon-scaffold_86-1491911889:310787..310809Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:310787..310809TCONS_00072855-exon-scaffold_86-1510915933:310787..310809Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:310787..310809TCONS_00072855-exon-scaffold_86-1575043694:310787..310809Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1491911889:312359..313069TCONS_00072855-exon-scaffold_86-1491911889:312359..313069Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1510915933:312359..313069TCONS_00072855-exon-scaffold_86-1510915933:312359..313069Clytia hemisphaericaexon
TCONS_00072855-exon-scaffold_86-1575043694:312359..313069TCONS_00072855-exon-scaffold_86-1575043694:312359..313069Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072855-proteinTCONS_00072855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:303265..313069 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.62118 1.50419 6.35508 5.31919 3.89287 3.10272 5.42647 4.62179 2.78224 2.60035 1.56269 1.0273 1.02588 0 2.09114 3.29225 3.56008 3.69516 1.46672 0 0 0 3.53709 5.31894 6.34821 8.31186 0 0 0 3.26094
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072855 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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