TCONS_00072724 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072724
Unique NameTCONS_00072724
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1624

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072724 ID=TCONS_00072724|Name=TCONS_00072724|organism=Clytia hemisphaerica|type=transcript|length=1624bp
tttcttcGGTCAGACGTAGTGTCGGTCATCAATAAATAATTATGGAGCTG
TATTTAGTGGCAGGGATTGTTCTCGTGACAATATTAATAGTGTTGCTTTT
GATTCGATCAAGTAAATCTGGTGATAGCGTCATTCTTTTGGGCTTATGTG
ATTCTGGTAAAACTTCATTATTTGGACAGCTTACCACCGGAAAAGAATTG
AAGACCCAAACTTCCATTAttgaaaacaaaggaaagaTCAGTACAACTGC
CACAAAGAACGGTAAACCGTGGAAATTGATTGACATTCCAGGCCATGAAA
GAGTTCGAGATAAATATTTCTACAACAACAAAGACAATGCAAGAGGTATT
CTTTTCCTGATTGACAGTGTCAATTTCCCTCGAGAAATTCGTGATGTGGC
AGAATGCATGTATGACTTGTTAGCTAACCGCACAATGCAAAGAAACAAAG
TCTCTGTCATGGTCGCCTGCAACAAACAAGATATTCCCACCGCGAAATCA
CACAACGTTATCAAAAGCCAATTGGAAAAAGAATTaaACAAACTTCGGCA
AACTCGTTCGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTAGAA
ATGCTTTCATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTCAAT
CCAATCAAAGTTGAGTTTTGCGAATGTAATTTGAAGAACACACAAGTTGA
GGGAGAAGTAAAAGTCGATGGCGTTCGTACTTGGCTTGAAAAATTGTAGA
TATTATCAGTGGTTTTTAGGgtgttgttatttttatttattagtAATGAT
AGTAACATATTAGTCCCCGTGTCAATCAAAAATTCagctttttctaaatt
tctaaaaacgAGAATTTTCAGATTTACATTCCTAAACCAAAAGACAAACT
ATCTTATTCCCGTGGTTTTCTAGCCTTTTCAAAAAGGATCATGCAAATTT
GTATAATcaattttgttgtgttttttaaaatattagtTTGTTTTAATGCA
AAATGAATATAAATGTATTTTGAAATGCGAAATTTTGCATTTATATGGAT
CAACTATTTACAAATGCGTTTACGATTAGAAAATAAATTGCTTTTCTTGT
TTAcccaaaatatttaataaaaaatattttgagcgaAAATTTATGAATGT
TCGATCTTCTTTACACAATATTAGGTAAATGATTTTCTTGCCCGATTAAA
CTGGTTTTGGAGTCAGTTCTTTCTTTATGCTTCTGATTGACTTTGACAGG
ACTTCCAGCTTTATCGCTTTTGGTTTCGTCATCATCATAGCCTAAGTTGA
AAAGGCTCTCACTAGCCTCTGATTCTGTTGCTAATAAAGCATCCATGGAC
AGTTCAGGTGCTTGATCTATACCATCTGTTTCATGTTCTTCAGGAACTGA
GGCTAGTTCAGGTGATTTTTCTGTTACCGACTTTTTCTGAGGTGAGGGGG
GTGCACCTGTTAAACGTCTTGTTTTATCCATCACGCTTTGACGAACATTT
CCAAGCATGTTCATGCCTTGTTCCGCTTTTGACTTGGCTTGATCAGCTAA
ATGATGTAACATGGAGGTGACGAGACCGAGAATAATGGTCAACGCTGACA
AGCCGAGTAAGAAGTAAAGTAGCG
Run BLAST on NCBI

transcript from alignment at scaffold_82:255391..263548-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072724 ID=TCONS_00072724|Name=TCONS_00072724|organism=Clytia hemisphaerica|type=transcript|length=8158bp|location=Sequence derived from alignment at scaffold_82:255391..263548- (Clytia hemisphaerica)
TTTCTTCGGTCAGACGTAGTGTCGGTCATGTGAGTGAAGTAATTTTTACT
TTAATTCAAAGATTTTTCAGTTTGGTTCAATCTAAAAGATCTTTCTTGCC
TGTTTTTGCTGTTTTTATTTTGCATTGCGTATTTAAAATCGCTCACAACA
TCTTGATTTTCTAGCTAGCTAATATCTCAGAATATCTTTTTTGATATATT
TTATTGAGATAACTCTAATCCTTGTCTTTGCAATTACATTCTTTAGATGA
CTGATGCTTTTTTTCAGAAACCTGAATTTCCTAGTGTGACTAACTGGTGG
GCAGACCAACTAAAGATGTTCATTTTGAGAGTGAGATAGAAATTTTGAAC
ATGAAGGAAAATCCAACATGTGTTACCGTAAGTTGGTCTAATGTCGACAT
CCGTCTTCTAATTTCGACATCCTACTTTATAGATAGGAATAAAAAGAAGG
TCGAAATCACTGATAGACTAAAGATTTTTCCTCTCATCGGGCGGCTAATC
AAAGTCTATCAGCGATTCCGACCTTCCTCAGTTTCTATATTGTTCCTATC
TCTAAAGAAGGGTTTCAAAATTAGAAGGCGGATGTCGACATTAGACCAAC
TTACGGTAGGTTCCATGACCTGTCAAGATTTTTTAATATCTTTTTCTTTG
GTAAAACAATCTCAAATAAAAAGGAAATTGACAAGGAATAGATAAGCTTT
TCATATAGTCAAACAGAATTATCATAGCTTTTTACCAAAAAAATATATTA
CTGTTCAGTAAAGGTCCAATTTCAGCCAAATCCAACTTTTGTTCTTGCTG
GTGCAGAGCTCTGACATTAGGCTGTCAGACCGAGATAAGACGCGGATACT
TCAATAAAAAGTTATGCAAGAAAAACCACCATTTCCATCTAAAAAGGTCA
CTTTTTTTGCCAAAGAACTTTTGATAAAACTGTTCCCCTAATTTCCCCCT
TTCACTAGATCTTCCTCTATCTTATGTGCTTCAGAAAAACCAAAAACATT
GCCCTAAAAGCTTAGCCTCGCGTTTATAAATTGAAAATCGGGGAAATTCT
TTTAGCAAAGTATTCTATTATCATTATCCCTTTATTTTAAGTTCTGGAAC
TTTTAAAGAAAAATGGAAAAATAGAAAAGTTGTATTTATACTCATAGTGT
GCAGAGAGGTCCAGCCCCCAGCATTTTTCAGGGGGGGCTAAGGAAAATAG
CCCTCAGCTAAATTCTAGAATTTAAATTCTAAATTCTAAATTCCTCCACC
TTCACAAAGCAAAATATCAAAGAAATTTTGCATGCAAATTTTCGATAAAT
TTATTGCGCCGCAGGGAAAATGTTTTTTCAAGAGGGATAAAACCTTCCCA
ACAGCATAGATTTTTAACATAATTTAAAATATCTTCAACCTATCAGCTCT
GCCACCAGTTCTACTACACAGCACTCAGCCCCCCCTAGCAAGCTAGCCTC
CAGTAATTTTTGAAAAATACAGCCCCCAATCAAACAAAAATGGTTTAGCC
CCCCCCTAAGCTCAGGGGGGATTCATTCTATGATACTGCTTTATTCATAT
TTTGAATTTAAAGCTCTCCCTATGTGACTTTTTTTTGCAAACTTCAAAAA
CCTGATTTTTTTCCGTTTTTTGCGGGACTCTAACTTAAGTGCTTGCATGC
AGCAATAGGTACAAAGTCCAAATATGCGTTATTCGTAGATTTTGTTTGAA
ATTCGGTACCTCTAGTGGGGATAATGACTTAGGGTTTAGATCTTTTGATA
ATCAGGATGCCATGTTGAATAATTAAAAACTTCAAACAATGACACAGTTA
ATGCATTATTTTTGTAGACTTGTGGAATGCATACTATTTTCATATAATTA
GGTATTGGGCTCGCCACGCCTGTGAATCCTTTATAGCTCCCTACTAACTT
GGGCAATGTATCTTTCCATTAAGTCATTGGCGCATGATCATCTGCAAAGC
TATCTTTTTCATAGTACTGAATCATTCGTTTGTTGAAGATCACCACCGAA
ACTACAGACTACCTGCAAGAAAAATAGTTGGGTTAATTTATTGAGGTTTC
TTCCTCTCAAGTTTGGCTGTGCTGGTCCAAACAGGGGCACCTCGTGAAGG
ATGTGTATTTGAAATTGCTTAAAATTCTAACAAGATTCTTAATATTTCTT
GCAGCAATAAATAATTATGGAGCTGTATTTAGTGGCAGGGATTGTTCTCG
TGACAATATGTAAGTTATCTATATCTTATTAACTTAACCTTGCCTCACTC
ATTTTTAAATGTTTATTATCAAGCTTTTTGGGATTTGTATTATCGTTATC
TGCCAGGCTACGTGATTTTTATCTATTTTTTTTGGCCTCATCACAAAGTT
TTGTATTTACCACTGATCAGTTAAAATAGCAATTAAAGTTGAACAATTTT
TCCAAAGACTGTAATTCTGTTTTGATTTTCAAAAAGCCATGTGAATCAAT
TTATCATAATTTTTAATTGCTGCTTATAACATAGCAAAGAATTGACTGAT
AAAAGCTATGATGATTTTAAAAGGACGTAGAAATTTGGTTCTCAAAGCTT
AACAAGCAGAATTCTAAAAATTTTTAGAACTATTGTGACTAAGTTGTAAC
CAACTAAAATTTACGGAGTTAGAATTTGTAGATAATCTTTTAACCTGATG
CAATTTCTTCTTTTAGTAATAGTGTTGCTTTTGATTCGATCAAGTAAATC
TGGTGATAGCGTCATTCTTTTGGGCTTATGTGATTCTGGTAAAACTTCAT
TATTTGGACAGGTAAGTTTGTTGATATTCTTTTAGTTTCATAATAATTTA
AGAAACATTAGCATATAACAGGTAGCTCTGAAATCTAAGAAATATTGATA
ATGTGATCTAAGTCTGCTTGCAATAAGTGTTCACTCTTATGGGTCTTTTC
GTGGAAACAATGTCATTTTACAACTCGCTGATTTTTCAGCTTACCACCGG
AAAAGAATTGAAGACCCAAACTTCCATTATTGAAAACAAAGGAAAGATCA
GTACAACTGCCACAAAGGTACTCTAACCCCCTCGTATATTTTTTAAAAAG
CTTTTTTCTTGTGTGTAATAGGTGCTTAGCTATGACATATTTGGTGGCGT
ATATAACAAGATATCGAGCATTTTAAGGTGTCTATGAAATTCCATATTGA
TGTAAGATTCAAAATCAATTCTTATCAATCTACTATTTCGTGTACTCATG
ATATGCACCACTGCAATGACTCCACTAAATTATGCAACTTTTCTGTTGTT
TTTTGTTCCACCCAACACGTCACTTTTTCTATTGTTTAAGTGACGCATTG
GGCTGAAAAGCTTAAAAGTTTTCAGAAGACTCTCCAGTGGTGCATATCAT
GAATATATCGAGAAAAAAGGAACTAATTTACAATTGTTGGTGCAGTCTTC
AGACAATGTAGATCTTTGTTGTATTTATTTCACTGTACAAAAAGCTATTT
TTTACCTCTTCTTTTCTTCTGATAGAACGGTAAACCGTGGAAATTGATTG
ACATTCCAGGCCATGAAAGAGTTCGAGATAAATATTTCTACAACAACAAA
GACAATGCAAGGTAAATTCACAGTAGTTTGATAACAAAGTAGTTATCCTT
GCTGCTATCTCTATGTTTTTAATTTTGTTACGATTACTGACACTCTTGTA
TCCCCTTCCTTAGCATTGAAAATAGCGAATTTATGTAAAATAAAGACTTT
CGCATAAGGGTATTAACTCAGGCACGGGAATTTTGTTTAATGTAGTTTTT
AAGAATATGGAAATAACTTAAGTTATTTGAAACAAGTGCGTTTTATTTTT
AGAGGTATTCTTTTCCTGATTGACAGTGTCAATTTCCCTCGAGAAATTCG
TGATGTGGCAGAGTAAGTCTTGTTTTATAAAAATTTATTAAGATTAAGTC
TGTTTGCTGTGAAACACGTTTCCCTTAGCTTCGCCATTCAAAGTGCTTGA
ACAGGAGAATATTTCATATGGATCTTCCAAACTGTAATTTCAACTCCGTC
CAGTAATAAAAAGCCGTTCAACTGAAAATCTTCAATCCTGGTTTATTTTA
CACTTCTTTGATCAGACAATATTAGGTCCCTAAATGGAGATGCTAGCGTA
ACAGAAGTGTCATCGTTGACTCACTGTTCTTTTCAATTTCACAGATGCAT
GTATGACTTGTTAGCTAACCGCACAATGCAAAGAAACAAAGTCTCTGTCA
TGGTCGCCTGCAACAAACAAGGTATTGCATTCAAATCCTCTGATGATTAT
ATTTTCCAATATGTTGAAATTATTGAAATTAATAATTAGTATTATGTATT
AGTGATATAATTAGAAGTGTCTGACTTCTAACGATATACCAATTCAAATT
ACAGATATTCCCACCGCGAAATCACACAACGTTATCAAAAGCCAATTGGA
AAAAGAATTGTAAGTTTTATCTTATCTTAGCTTCTAAAGTTTTCTATCTC
TGCTTACCAAGCTAACAATCAAAAGTATGCCACAAAGTTTACAACTTTAT
TTTCGTAAAGATAAATCTCTCATTAATCTTGAAAAAACGAAATCTATGTA
TTTCCTTAAAGTTCTTGCATCGGAGGTAACCTCTATAAGGTAAGTCTCTA
TAAGGTAGCCCGTTTCAGTCGAAAAACACCGTTTTTTTCACTCAAACAGG
CAACCCTCTAAGACTTGTAACTTTAAATTCATGTGAAAAACCATGGTTTA
TCTGAAATGAGTTTCTAGCACTAAAGGATAAAAAGTGCATTTTTCATCTT
CTTTTTCTAAAATTTTTTAGAATAACTTATTCCAAAAAATTATAGTGCTA
TGAGCACAGATCTGTAAAGCCCGAAACTTTAAGCTTTCTCCAGCAAAAAA
AAGTGAAGCGAAAATTGAACTTTTTAAATTTCGTGCCGATGGATAGGATC
TAGCATTTTAAAATTGTTTTTGGAGCGCGAGATAAAAAAAGTAGTGATTT
CTTTGGTAGGGAAACCTACCAAAACTTGCTTCACTTTTCGATAAAAGGCC
GCGGATCTAGGCTATGAGTTATCTTTTCAACGGCGTATGATTTGTTGTAT
TTGAGACATTCGTTGAAAAAATGCAAGAAAACAAGCACTACTTACTTACT
TAAAAGTGAATGGACTTTTAAAATCTATAAAATCGGGTGATGAAAGTCGA
TCTTAACATTCCCCTCTCATTATTTTCAATTTCAGAAACAAACTTCGGCA
AACTCGTTCGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTAGAA
ATGCTTTCATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTCAAT
CCAATCAAAGTTGAGTTTTGCGNTTTTTACCTCTTCTTTTCTTCTGATAG
AACGGTAAACCGTGGAAATTGATTGACATTCCAGGCCATGAAAGAGTTCG
AGATAAATATTTCTACAACAACAAAGACAATGCAAGGTAAATTCACAGTA
GTTTGATAACAAAGTAGTTATCCTTGCTGCTATCTCTATGTTTTTAATTT
TGTTACGATTACTGACACTCTTGTATCCCCTTCCTTAGCATTGAAAATAG
CGAATTTATGTAAAATAAAGACTTTCGCATAAGGGTATTAACTCAGGCAC
GGGAATTTTGTTTAATGTAGTTTTTAAGAATATGGAAATAACTTAAGTTA
TTTGAAACAAGTGCGTTTTATTTTTAGAGGTATTCTTTTCCTGATTGACA
GTGTCAATTTCCCTCGAGAAATTCGTGATGTGGCAGAGTAAGTCTTGTTT
TATAAAAATTTATTAAGATTAAGTCTGTTTGCTGTGAAACACGTTTCCCT
TAGCTTCGCCATTCAAAGTGCTTGAACAGGAGAATATTTTATATGGATCT
TCCAAACTGTAATTTCAACTCCGTCCAGTAATAAAAAGCCGTTCAACTGA
AAATCTTCAACCCTGGTTTATTTTACACTTCTTTGATCAGACAATATTAG
GTCCCTAAATGGAGATGCTAGCGTAACAGAAGTGTCATCGTTGACTCACT
GTTCTTTTCAATTTCACAGATGCATGTATGACTTGTTAGCTAACCGCACA
ATGCAAAGAAACAAAGTCTCTGTCATGGTCGCCTGCAACAAACAAGGTAA
CAAATTTATATCCTCTGATGATTATATTTTCCAATATTTTGGCAATTATT
GAAATTAATAATTAGTATTATGTATTAGTGATATAATTAGAAGTGTCTGA
CGTTTACCCCGTTGCTTTCATTTGTAGTCTTTTAACGATATACCAATTCA
AATTACAGATATTCCCACCGCGAAATCACACAACGTTATCAAAAGCCAAT
TGGAAAAAGAATTGTAAGTTTTATCTTATTTTACCTTCTAAAGTTTTCTA
TTCTGCTTTAGCTAACGATCAAAAGTTTGTCACAAAGTTTACAACTTTAT
TTTCGTAAAGATAAATCTCTCATTAATCTTGAAAAAACGAAATCTATGTA
TTCCCTTAAAGTTCTTGCATCGGAGGTAACCTCTATAAGGTAGCCCGTTT
CAGTCGAAAAACACCGTTTTTTTCACTCAAACAGGCAACCCTCTAAGACT
TGTAACTTTAAATTCATGTGAAAACCATGGTTTATCTGAAATGAGTTTCT
AGCACTAAAGGATAAAAAGTGCATTTTTCATCTTCTTTTTCTAAAATTTT
TTAGAATAACTTATTCCAAAAAATTATAGTGCTATGAGCACAGATCTGTA
AAGCCCGAAACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCGAAAATT
GAACTTTTTAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAAAATTG
TTTTTGGAGCGCGAGATAAAAAAAGTAGTGATTTCTTTGGTAGGGAAACC
TACCAAAACTTGCTTCACTTTTCGATAAAAGGCCGCGGATCTAGGCTATG
AGTTATCTTTTCAACGGCGTATGATTTGTTGTATTTGAGACATTCGTTGA
AAAAATGCAAGAAAACAAGCACTACTTACTTACTTAAAAGTGAATGGACT
TTTAAAATCTATAAAATCGGGTGATGAAAGTCGATCTTAACATTCCCCTC
TCATTATTTTCAATTTCAGAAACAAACTTCGGCAAACTCGTTCGGCAGCT
TTACTTGGAATTGACGATTATTCATCCAGTAGAAATGCTTTCATCGGTAA
GCAAGGGAAAGACTTTGAATTCTCGCATGTCAATCCAATCAAAGTTGAGT
TTTGCGAATGTAATTTGAAGAACACACAAGTTGAGGGAGAAGTAAAAGTC
GATGGCGTTCGTACTTGGCTTGAAAAATTGTAGATATTATCAGTGGTTTT
TAGGGTGTTGTTATTTTTATTTATTAGTAATGATAGTAACATATTAGTCC
CCGTGTCAATCAAAAATTCAGCTTTTTCTAAATTTCTAAAAACGAGAATT
TTCAGATTTACATTCCTAAACCAAAAGACAAACTATCTTATTCCCGTGGT
TTTCTAGCCTTTTCAAAAAGGATCATGCAAATTTGTATAATCAATTTTGT
TGTGTTTTTTAAAATATTAGTTTGTTTTAATGCAAAATGAATATAAATGT
ATTTTGAAATGCGAAATTTTGCATTTATATGGATCAACTATTTACAAATG
CGTTTACGATTAGAAAATAAATTGCTTTTCTTGTTTACCCAAAATATTTA
ATAAAAAATATTTTGAGCGAAAATTTATGAATGTTCGATCTTCTTTACAC
AATATTAGGTAAATGATTTTCTTGCCCGATTAAACTGGTTTTGGAGTCAG
TTCTTTCTTTATGCTTCTGATTGACTTTGACAGGACTTCCAGCTTTATCG
CTTTTGGTTTCGTCATCATCATAGCCTAAGTTGAAAAGGCTCTCACTAGC
CTCTGATTCTGTTGCTAATAAAGCATCCATGGACAGTTCAGGTGCTTGAT
CTATACCATCTGTTTCATGTTCTTCAGGAACTGAGGCTAGTTCAGGTGAT
TTTTCTGTTACCGACTTTTTCTGAGGTGAGGGGGGTGCACCTGTTAAACG
TCTTGTTTTATCCATCACGCTTTGACGAACATTTCCAAGCATGTTCATGC
CTTGTTCCGCTTTTGACTTGGCTTGATCAGCTAAATGATGTAACATGGAG
GTGACGAGACCGAGAATAATGGTCAACGCTGACAAGCCGAGTAAGAAGTA
AAGTAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045139XLOC_045139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072724-exon-scaffold_82-1575043694:263520..263548TCONS_00072724-exon-scaffold_82-1575043694:263520..263548Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:261340..261394TCONS_00072724-exon-scaffold_82-1575043694:261340..261394Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:260788..260882TCONS_00072724-exon-scaffold_82-1575043694:260788..260882Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:260532..260609TCONS_00072724-exon-scaffold_82-1575043694:260532..260609Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:259988..260073TCONS_00072724-exon-scaffold_82-1575043694:259988..260073Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:259687..259746TCONS_00072724-exon-scaffold_82-1575043694:259687..259746Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:259328..259404TCONS_00072724-exon-scaffold_82-1575043694:259328..259404Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:257236..257290TCONS_00072724-exon-scaffold_82-1575043694:257236..257290Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:255391..256479TCONS_00072724-exon-scaffold_82-1575043694:255391..256479Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:263520..263548TCONS_00072724-exon-scaffold_82-1510915933:263520..263548Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:261340..261394TCONS_00072724-exon-scaffold_82-1510915933:261340..261394Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:260788..260882TCONS_00072724-exon-scaffold_82-1510915933:260788..260882Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:260532..260609TCONS_00072724-exon-scaffold_82-1510915933:260532..260609Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:259988..260073TCONS_00072724-exon-scaffold_82-1510915933:259988..260073Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:259687..259746TCONS_00072724-exon-scaffold_82-1510915933:259687..259746Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:259328..259404TCONS_00072724-exon-scaffold_82-1510915933:259328..259404Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:257236..257290TCONS_00072724-exon-scaffold_82-1510915933:257236..257290Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:255391..256479TCONS_00072724-exon-scaffold_82-1510915933:255391..256479Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:263520..263548TCONS_00072724-exon-scaffold_82-1491911889:263520..263548Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:261340..261394TCONS_00072724-exon-scaffold_82-1491911889:261340..261394Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:260788..260882TCONS_00072724-exon-scaffold_82-1491911889:260788..260882Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:260532..260609TCONS_00072724-exon-scaffold_82-1491911889:260532..260609Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:259988..260073TCONS_00072724-exon-scaffold_82-1491911889:259988..260073Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:259687..259746TCONS_00072724-exon-scaffold_82-1491911889:259687..259746Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:259328..259404TCONS_00072724-exon-scaffold_82-1491911889:259328..259404Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:257236..257290TCONS_00072724-exon-scaffold_82-1491911889:257236..257290Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:255391..256479TCONS_00072724-exon-scaffold_82-1491911889:255391..256479Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:255391..263548 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.45201e-06	9.13416e-07	1.06466e-06	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6.1191e-08	0	0	0	0	0
Blast
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BLAST of TCONS_00072724 vs. Swiss-Prot (Human)
Match: SRPRB (Signal recognition particle receptor subunit beta OS=Homo sapiens GN=SRPRB PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 1.311e-49
Identity = 99/215 (46.05%), Postives = 137/215 (63.72%), Query Frame = 3 
Query:  105 RSSKSGD-SVILLGLCDSGKTSLFGQLTTGKELKTQTSIIENKGKISTTATKNGKPWKLIDIPGHERVRDKYFYNNKDNARGILFLIDSVNFPREIRDVAECMYDLLANRTMQRNKVSVMVACNKQDIPTAKSHNVIKSQLEKELNKLRQTRSAALLGIDDYSSSRNAFIGKQGKDFEFSHVNPIKVEFCECNLKNTQVE-GEVKVDGVRTWLEK 743
            RS +S   +V+L+GLCDSGKT LF +L TG    TQTSI ++   +       G    LID+PGHE +R ++    K +AR I+F++DS  F RE++DVAE +Y +L +    +N  S ++ACNKQDI  AKS  +I+ QLEKELN LR TRSAA   +D  SS+  A +GK+GK+FEFS + P+KVEF EC+ K  + + G   +  +  WL K
Sbjct:   58 RSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCA-VYRVNNNRGNSLTLIDLPGHESLRLQFLERFKSSARAIVFVVDSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDS-SSTAPAQLGKKGKEFEFSQL-PLKVEFLECSAKGGRGDVGSADIQDLEKWLAK 269
The following BLAST results are available for this feature:
BLAST of TCONS_00072724 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRPRB1.311e-4946.05Signal recognition particle receptor subunit beta ... [more]
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