TCONS_00072724 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072724
Unique NameTCONS_00072724
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1624

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072724 ID=TCONS_00072724|Name=TCONS_00072724|organism=Clytia hemisphaerica|type=transcript|length=1624bp
tttcttcGGTCAGACGTAGTGTCGGTCATCAATAAATAATTATGGAGCTG
TATTTAGTGGCAGGGATTGTTCTCGTGACAATATTAATAGTGTTGCTTTT
GATTCGATCAAGTAAATCTGGTGATAGCGTCATTCTTTTGGGCTTATGTG
ATTCTGGTAAAACTTCATTATTTGGACAGCTTACCACCGGAAAAGAATTG
AAGACCCAAACTTCCATTAttgaaaacaaaggaaagaTCAGTACAACTGC
CACAAAGAACGGTAAACCGTGGAAATTGATTGACATTCCAGGCCATGAAA
GAGTTCGAGATAAATATTTCTACAACAACAAAGACAATGCAAGAGGTATT
CTTTTCCTGATTGACAGTGTCAATTTCCCTCGAGAAATTCGTGATGTGGC
AGAATGCATGTATGACTTGTTAGCTAACCGCACAATGCAAAGAAACAAAG
TCTCTGTCATGGTCGCCTGCAACAAACAAGATATTCCCACCGCGAAATCA
CACAACGTTATCAAAAGCCAATTGGAAAAAGAATTaaACAAACTTCGGCA
AACTCGTTCGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTAGAA
ATGCTTTCATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTCAAT
CCAATCAAAGTTGAGTTTTGCGAATGTAATTTGAAGAACACACAAGTTGA
GGGAGAAGTAAAAGTCGATGGCGTTCGTACTTGGCTTGAAAAATTGTAGA
TATTATCAGTGGTTTTTAGGgtgttgttatttttatttattagtAATGAT
AGTAACATATTAGTCCCCGTGTCAATCAAAAATTCagctttttctaaatt
tctaaaaacgAGAATTTTCAGATTTACATTCCTAAACCAAAAGACAAACT
ATCTTATTCCCGTGGTTTTCTAGCCTTTTCAAAAAGGATCATGCAAATTT
GTATAATcaattttgttgtgttttttaaaatattagtTTGTTTTAATGCA
AAATGAATATAAATGTATTTTGAAATGCGAAATTTTGCATTTATATGGAT
CAACTATTTACAAATGCGTTTACGATTAGAAAATAAATTGCTTTTCTTGT
TTAcccaaaatatttaataaaaaatattttgagcgaAAATTTATGAATGT
TCGATCTTCTTTACACAATATTAGGTAAATGATTTTCTTGCCCGATTAAA
CTGGTTTTGGAGTCAGTTCTTTCTTTATGCTTCTGATTGACTTTGACAGG
ACTTCCAGCTTTATCGCTTTTGGTTTCGTCATCATCATAGCCTAAGTTGA
AAAGGCTCTCACTAGCCTCTGATTCTGTTGCTAATAAAGCATCCATGGAC
AGTTCAGGTGCTTGATCTATACCATCTGTTTCATGTTCTTCAGGAACTGA
GGCTAGTTCAGGTGATTTTTCTGTTACCGACTTTTTCTGAGGTGAGGGGG
GTGCACCTGTTAAACGTCTTGTTTTATCCATCACGCTTTGACGAACATTT
CCAAGCATGTTCATGCCTTGTTCCGCTTTTGACTTGGCTTGATCAGCTAA
ATGATGTAACATGGAGGTGACGAGACCGAGAATAATGGTCAACGCTGACA
AGCCGAGTAAGAAGTAAAGTAGCG
Run BLAST on NCBI

transcript from alignment at scaffold_82:255391..263548-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072724 ID=TCONS_00072724|Name=TCONS_00072724|organism=Clytia hemisphaerica|type=transcript|length=8158bp|location=Sequence derived from alignment at scaffold_82:255391..263548- (Clytia hemisphaerica)
TTTCTTCGGTCAGACGTAGTGTCGGTCATGTGAGTGAAGTAATTTTTACT TTAATTCAAAGATTTTTCAGTTTGGTTCAATCTAAAAGATCTTTCTTGCC TGTTTTTGCTGTTTTTATTTTGCATTGCGTATTTAAAATCGCTCACAACA TCTTGATTTTCTAGCTAGCTAATATCTCAGAATATCTTTTTTGATATATT TTATTGAGATAACTCTAATCCTTGTCTTTGCAATTACATTCTTTAGATGA CTGATGCTTTTTTTCAGAAACCTGAATTTCCTAGTGTGACTAACTGGTGG GCAGACCAACTAAAGATGTTCATTTTGAGAGTGAGATAGAAATTTTGAAC ATGAAGGAAAATCCAACATGTGTTACCGTAAGTTGGTCTAATGTCGACAT CCGTCTTCTAATTTCGACATCCTACTTTATAGATAGGAATAAAAAGAAGG TCGAAATCACTGATAGACTAAAGATTTTTCCTCTCATCGGGCGGCTAATC AAAGTCTATCAGCGATTCCGACCTTCCTCAGTTTCTATATTGTTCCTATC TCTAAAGAAGGGTTTCAAAATTAGAAGGCGGATGTCGACATTAGACCAAC TTACGGTAGGTTCCATGACCTGTCAAGATTTTTTAATATCTTTTTCTTTG GTAAAACAATCTCAAATAAAAAGGAAATTGACAAGGAATAGATAAGCTTT TCATATAGTCAAACAGAATTATCATAGCTTTTTACCAAAAAAATATATTA CTGTTCAGTAAAGGTCCAATTTCAGCCAAATCCAACTTTTGTTCTTGCTG GTGCAGAGCTCTGACATTAGGCTGTCAGACCGAGATAAGACGCGGATACT TCAATAAAAAGTTATGCAAGAAAAACCACCATTTCCATCTAAAAAGGTCA CTTTTTTTGCCAAAGAACTTTTGATAAAACTGTTCCCCTAATTTCCCCCT TTCACTAGATCTTCCTCTATCTTATGTGCTTCAGAAAAACCAAAAACATT GCCCTAAAAGCTTAGCCTCGCGTTTATAAATTGAAAATCGGGGAAATTCT TTTAGCAAAGTATTCTATTATCATTATCCCTTTATTTTAAGTTCTGGAAC TTTTAAAGAAAAATGGAAAAATAGAAAAGTTGTATTTATACTCATAGTGT GCAGAGAGGTCCAGCCCCCAGCATTTTTCAGGGGGGGCTAAGGAAAATAG CCCTCAGCTAAATTCTAGAATTTAAATTCTAAATTCTAAATTCCTCCACC TTCACAAAGCAAAATATCAAAGAAATTTTGCATGCAAATTTTCGATAAAT TTATTGCGCCGCAGGGAAAATGTTTTTTCAAGAGGGATAAAACCTTCCCA ACAGCATAGATTTTTAACATAATTTAAAATATCTTCAACCTATCAGCTCT GCCACCAGTTCTACTACACAGCACTCAGCCCCCCCTAGCAAGCTAGCCTC CAGTAATTTTTGAAAAATACAGCCCCCAATCAAACAAAAATGGTTTAGCC CCCCCCTAAGCTCAGGGGGGATTCATTCTATGATACTGCTTTATTCATAT TTTGAATTTAAAGCTCTCCCTATGTGACTTTTTTTTGCAAACTTCAAAAA CCTGATTTTTTTCCGTTTTTTGCGGGACTCTAACTTAAGTGCTTGCATGC AGCAATAGGTACAAAGTCCAAATATGCGTTATTCGTAGATTTTGTTTGAA ATTCGGTACCTCTAGTGGGGATAATGACTTAGGGTTTAGATCTTTTGATA ATCAGGATGCCATGTTGAATAATTAAAAACTTCAAACAATGACACAGTTA ATGCATTATTTTTGTAGACTTGTGGAATGCATACTATTTTCATATAATTA GGTATTGGGCTCGCCACGCCTGTGAATCCTTTATAGCTCCCTACTAACTT GGGCAATGTATCTTTCCATTAAGTCATTGGCGCATGATCATCTGCAAAGC TATCTTTTTCATAGTACTGAATCATTCGTTTGTTGAAGATCACCACCGAA ACTACAGACTACCTGCAAGAAAAATAGTTGGGTTAATTTATTGAGGTTTC TTCCTCTCAAGTTTGGCTGTGCTGGTCCAAACAGGGGCACCTCGTGAAGG ATGTGTATTTGAAATTGCTTAAAATTCTAACAAGATTCTTAATATTTCTT GCAGCAATAAATAATTATGGAGCTGTATTTAGTGGCAGGGATTGTTCTCG TGACAATATGTAAGTTATCTATATCTTATTAACTTAACCTTGCCTCACTC ATTTTTAAATGTTTATTATCAAGCTTTTTGGGATTTGTATTATCGTTATC TGCCAGGCTACGTGATTTTTATCTATTTTTTTTGGCCTCATCACAAAGTT TTGTATTTACCACTGATCAGTTAAAATAGCAATTAAAGTTGAACAATTTT TCCAAAGACTGTAATTCTGTTTTGATTTTCAAAAAGCCATGTGAATCAAT TTATCATAATTTTTAATTGCTGCTTATAACATAGCAAAGAATTGACTGAT AAAAGCTATGATGATTTTAAAAGGACGTAGAAATTTGGTTCTCAAAGCTT AACAAGCAGAATTCTAAAAATTTTTAGAACTATTGTGACTAAGTTGTAAC CAACTAAAATTTACGGAGTTAGAATTTGTAGATAATCTTTTAACCTGATG CAATTTCTTCTTTTAGTAATAGTGTTGCTTTTGATTCGATCAAGTAAATC TGGTGATAGCGTCATTCTTTTGGGCTTATGTGATTCTGGTAAAACTTCAT TATTTGGACAGGTAAGTTTGTTGATATTCTTTTAGTTTCATAATAATTTA AGAAACATTAGCATATAACAGGTAGCTCTGAAATCTAAGAAATATTGATA ATGTGATCTAAGTCTGCTTGCAATAAGTGTTCACTCTTATGGGTCTTTTC GTGGAAACAATGTCATTTTACAACTCGCTGATTTTTCAGCTTACCACCGG AAAAGAATTGAAGACCCAAACTTCCATTATTGAAAACAAAGGAAAGATCA GTACAACTGCCACAAAGGTACTCTAACCCCCTCGTATATTTTTTAAAAAG CTTTTTTCTTGTGTGTAATAGGTGCTTAGCTATGACATATTTGGTGGCGT ATATAACAAGATATCGAGCATTTTAAGGTGTCTATGAAATTCCATATTGA TGTAAGATTCAAAATCAATTCTTATCAATCTACTATTTCGTGTACTCATG ATATGCACCACTGCAATGACTCCACTAAATTATGCAACTTTTCTGTTGTT TTTTGTTCCACCCAACACGTCACTTTTTCTATTGTTTAAGTGACGCATTG GGCTGAAAAGCTTAAAAGTTTTCAGAAGACTCTCCAGTGGTGCATATCAT GAATATATCGAGAAAAAAGGAACTAATTTACAATTGTTGGTGCAGTCTTC AGACAATGTAGATCTTTGTTGTATTTATTTCACTGTACAAAAAGCTATTT TTTACCTCTTCTTTTCTTCTGATAGAACGGTAAACCGTGGAAATTGATTG ACATTCCAGGCCATGAAAGAGTTCGAGATAAATATTTCTACAACAACAAA GACAATGCAAGGTAAATTCACAGTAGTTTGATAACAAAGTAGTTATCCTT GCTGCTATCTCTATGTTTTTAATTTTGTTACGATTACTGACACTCTTGTA TCCCCTTCCTTAGCATTGAAAATAGCGAATTTATGTAAAATAAAGACTTT CGCATAAGGGTATTAACTCAGGCACGGGAATTTTGTTTAATGTAGTTTTT AAGAATATGGAAATAACTTAAGTTATTTGAAACAAGTGCGTTTTATTTTT AGAGGTATTCTTTTCCTGATTGACAGTGTCAATTTCCCTCGAGAAATTCG TGATGTGGCAGAGTAAGTCTTGTTTTATAAAAATTTATTAAGATTAAGTC TGTTTGCTGTGAAACACGTTTCCCTTAGCTTCGCCATTCAAAGTGCTTGA ACAGGAGAATATTTCATATGGATCTTCCAAACTGTAATTTCAACTCCGTC CAGTAATAAAAAGCCGTTCAACTGAAAATCTTCAATCCTGGTTTATTTTA CACTTCTTTGATCAGACAATATTAGGTCCCTAAATGGAGATGCTAGCGTA ACAGAAGTGTCATCGTTGACTCACTGTTCTTTTCAATTTCACAGATGCAT GTATGACTTGTTAGCTAACCGCACAATGCAAAGAAACAAAGTCTCTGTCA TGGTCGCCTGCAACAAACAAGGTATTGCATTCAAATCCTCTGATGATTAT ATTTTCCAATATGTTGAAATTATTGAAATTAATAATTAGTATTATGTATT AGTGATATAATTAGAAGTGTCTGACTTCTAACGATATACCAATTCAAATT ACAGATATTCCCACCGCGAAATCACACAACGTTATCAAAAGCCAATTGGA AAAAGAATTGTAAGTTTTATCTTATCTTAGCTTCTAAAGTTTTCTATCTC TGCTTACCAAGCTAACAATCAAAAGTATGCCACAAAGTTTACAACTTTAT TTTCGTAAAGATAAATCTCTCATTAATCTTGAAAAAACGAAATCTATGTA TTTCCTTAAAGTTCTTGCATCGGAGGTAACCTCTATAAGGTAAGTCTCTA TAAGGTAGCCCGTTTCAGTCGAAAAACACCGTTTTTTTCACTCAAACAGG CAACCCTCTAAGACTTGTAACTTTAAATTCATGTGAAAAACCATGGTTTA TCTGAAATGAGTTTCTAGCACTAAAGGATAAAAAGTGCATTTTTCATCTT CTTTTTCTAAAATTTTTTAGAATAACTTATTCCAAAAAATTATAGTGCTA TGAGCACAGATCTGTAAAGCCCGAAACTTTAAGCTTTCTCCAGCAAAAAA AAGTGAAGCGAAAATTGAACTTTTTAAATTTCGTGCCGATGGATAGGATC TAGCATTTTAAAATTGTTTTTGGAGCGCGAGATAAAAAAAGTAGTGATTT CTTTGGTAGGGAAACCTACCAAAACTTGCTTCACTTTTCGATAAAAGGCC GCGGATCTAGGCTATGAGTTATCTTTTCAACGGCGTATGATTTGTTGTAT TTGAGACATTCGTTGAAAAAATGCAAGAAAACAAGCACTACTTACTTACT TAAAAGTGAATGGACTTTTAAAATCTATAAAATCGGGTGATGAAAGTCGA TCTTAACATTCCCCTCTCATTATTTTCAATTTCAGAAACAAACTTCGGCA AACTCGTTCGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTAGAA ATGCTTTCATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTCAAT CCAATCAAAGTTGAGTTTTGCGNTTTTTACCTCTTCTTTTCTTCTGATAG AACGGTAAACCGTGGAAATTGATTGACATTCCAGGCCATGAAAGAGTTCG AGATAAATATTTCTACAACAACAAAGACAATGCAAGGTAAATTCACAGTA GTTTGATAACAAAGTAGTTATCCTTGCTGCTATCTCTATGTTTTTAATTT TGTTACGATTACTGACACTCTTGTATCCCCTTCCTTAGCATTGAAAATAG CGAATTTATGTAAAATAAAGACTTTCGCATAAGGGTATTAACTCAGGCAC GGGAATTTTGTTTAATGTAGTTTTTAAGAATATGGAAATAACTTAAGTTA TTTGAAACAAGTGCGTTTTATTTTTAGAGGTATTCTTTTCCTGATTGACA GTGTCAATTTCCCTCGAGAAATTCGTGATGTGGCAGAGTAAGTCTTGTTT TATAAAAATTTATTAAGATTAAGTCTGTTTGCTGTGAAACACGTTTCCCT TAGCTTCGCCATTCAAAGTGCTTGAACAGGAGAATATTTTATATGGATCT TCCAAACTGTAATTTCAACTCCGTCCAGTAATAAAAAGCCGTTCAACTGA AAATCTTCAACCCTGGTTTATTTTACACTTCTTTGATCAGACAATATTAG GTCCCTAAATGGAGATGCTAGCGTAACAGAAGTGTCATCGTTGACTCACT GTTCTTTTCAATTTCACAGATGCATGTATGACTTGTTAGCTAACCGCACA ATGCAAAGAAACAAAGTCTCTGTCATGGTCGCCTGCAACAAACAAGGTAA CAAATTTATATCCTCTGATGATTATATTTTCCAATATTTTGGCAATTATT GAAATTAATAATTAGTATTATGTATTAGTGATATAATTAGAAGTGTCTGA CGTTTACCCCGTTGCTTTCATTTGTAGTCTTTTAACGATATACCAATTCA AATTACAGATATTCCCACCGCGAAATCACACAACGTTATCAAAAGCCAAT TGGAAAAAGAATTGTAAGTTTTATCTTATTTTACCTTCTAAAGTTTTCTA TTCTGCTTTAGCTAACGATCAAAAGTTTGTCACAAAGTTTACAACTTTAT TTTCGTAAAGATAAATCTCTCATTAATCTTGAAAAAACGAAATCTATGTA TTCCCTTAAAGTTCTTGCATCGGAGGTAACCTCTATAAGGTAGCCCGTTT CAGTCGAAAAACACCGTTTTTTTCACTCAAACAGGCAACCCTCTAAGACT TGTAACTTTAAATTCATGTGAAAACCATGGTTTATCTGAAATGAGTTTCT AGCACTAAAGGATAAAAAGTGCATTTTTCATCTTCTTTTTCTAAAATTTT TTAGAATAACTTATTCCAAAAAATTATAGTGCTATGAGCACAGATCTGTA AAGCCCGAAACTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCGAAAATT GAACTTTTTAAATTTCGTGCCGATGGATAGGATCTAGCATTTTAAAATTG TTTTTGGAGCGCGAGATAAAAAAAGTAGTGATTTCTTTGGTAGGGAAACC TACCAAAACTTGCTTCACTTTTCGATAAAAGGCCGCGGATCTAGGCTATG AGTTATCTTTTCAACGGCGTATGATTTGTTGTATTTGAGACATTCGTTGA AAAAATGCAAGAAAACAAGCACTACTTACTTACTTAAAAGTGAATGGACT TTTAAAATCTATAAAATCGGGTGATGAAAGTCGATCTTAACATTCCCCTC TCATTATTTTCAATTTCAGAAACAAACTTCGGCAAACTCGTTCGGCAGCT TTACTTGGAATTGACGATTATTCATCCAGTAGAAATGCTTTCATCGGTAA GCAAGGGAAAGACTTTGAATTCTCGCATGTCAATCCAATCAAAGTTGAGT TTTGCGAATGTAATTTGAAGAACACACAAGTTGAGGGAGAAGTAAAAGTC GATGGCGTTCGTACTTGGCTTGAAAAATTGTAGATATTATCAGTGGTTTT TAGGGTGTTGTTATTTTTATTTATTAGTAATGATAGTAACATATTAGTCC CCGTGTCAATCAAAAATTCAGCTTTTTCTAAATTTCTAAAAACGAGAATT TTCAGATTTACATTCCTAAACCAAAAGACAAACTATCTTATTCCCGTGGT TTTCTAGCCTTTTCAAAAAGGATCATGCAAATTTGTATAATCAATTTTGT TGTGTTTTTTAAAATATTAGTTTGTTTTAATGCAAAATGAATATAAATGT ATTTTGAAATGCGAAATTTTGCATTTATATGGATCAACTATTTACAAATG CGTTTACGATTAGAAAATAAATTGCTTTTCTTGTTTACCCAAAATATTTA ATAAAAAATATTTTGAGCGAAAATTTATGAATGTTCGATCTTCTTTACAC AATATTAGGTAAATGATTTTCTTGCCCGATTAAACTGGTTTTGGAGTCAG TTCTTTCTTTATGCTTCTGATTGACTTTGACAGGACTTCCAGCTTTATCG CTTTTGGTTTCGTCATCATCATAGCCTAAGTTGAAAAGGCTCTCACTAGC CTCTGATTCTGTTGCTAATAAAGCATCCATGGACAGTTCAGGTGCTTGAT CTATACCATCTGTTTCATGTTCTTCAGGAACTGAGGCTAGTTCAGGTGAT TTTTCTGTTACCGACTTTTTCTGAGGTGAGGGGGGTGCACCTGTTAAACG TCTTGTTTTATCCATCACGCTTTGACGAACATTTCCAAGCATGTTCATGC CTTGTTCCGCTTTTGACTTGGCTTGATCAGCTAAATGATGTAACATGGAG GTGACGAGACCGAGAATAATGGTCAACGCTGACAAGCCGAGTAAGAAGTA AAGTAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045139XLOC_045139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072724-exon-scaffold_82-1575043694:263520..263548TCONS_00072724-exon-scaffold_82-1575043694:263520..263548Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:261340..261394TCONS_00072724-exon-scaffold_82-1575043694:261340..261394Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:260788..260882TCONS_00072724-exon-scaffold_82-1575043694:260788..260882Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:260532..260609TCONS_00072724-exon-scaffold_82-1575043694:260532..260609Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:259988..260073TCONS_00072724-exon-scaffold_82-1575043694:259988..260073Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:259687..259746TCONS_00072724-exon-scaffold_82-1575043694:259687..259746Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:259328..259404TCONS_00072724-exon-scaffold_82-1575043694:259328..259404Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:257236..257290TCONS_00072724-exon-scaffold_82-1575043694:257236..257290Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1575043694:255391..256479TCONS_00072724-exon-scaffold_82-1575043694:255391..256479Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:263520..263548TCONS_00072724-exon-scaffold_82-1510915933:263520..263548Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:261340..261394TCONS_00072724-exon-scaffold_82-1510915933:261340..261394Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:260788..260882TCONS_00072724-exon-scaffold_82-1510915933:260788..260882Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:260532..260609TCONS_00072724-exon-scaffold_82-1510915933:260532..260609Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:259988..260073TCONS_00072724-exon-scaffold_82-1510915933:259988..260073Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:259687..259746TCONS_00072724-exon-scaffold_82-1510915933:259687..259746Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:259328..259404TCONS_00072724-exon-scaffold_82-1510915933:259328..259404Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:257236..257290TCONS_00072724-exon-scaffold_82-1510915933:257236..257290Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1510915933:255391..256479TCONS_00072724-exon-scaffold_82-1510915933:255391..256479Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:263520..263548TCONS_00072724-exon-scaffold_82-1491911889:263520..263548Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:261340..261394TCONS_00072724-exon-scaffold_82-1491911889:261340..261394Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:260788..260882TCONS_00072724-exon-scaffold_82-1491911889:260788..260882Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:260532..260609TCONS_00072724-exon-scaffold_82-1491911889:260532..260609Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:259988..260073TCONS_00072724-exon-scaffold_82-1491911889:259988..260073Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:259687..259746TCONS_00072724-exon-scaffold_82-1491911889:259687..259746Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:259328..259404TCONS_00072724-exon-scaffold_82-1491911889:259328..259404Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:257236..257290TCONS_00072724-exon-scaffold_82-1491911889:257236..257290Clytia hemisphaericaexon
TCONS_00072724-exon-scaffold_82-1491911889:255391..256479TCONS_00072724-exon-scaffold_82-1491911889:255391..256479Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:255391..263548 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 3.45201e-06 9.13416e-07 1.06466e-06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.1191e-08 0 0 0 0 0
Blast
BLAST of TCONS_00072724 vs. Swiss-Prot (Human)
Match: SRPRB (Signal recognition particle receptor subunit beta OS=Homo sapiens GN=SRPRB PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 1.311e-49
Identity = 99/215 (46.05%), Postives = 137/215 (63.72%), Query Frame = 3
Query:  105 RSSKSGD-SVILLGLCDSGKTSLFGQLTTGKELKTQTSIIENKGKISTTATKNGKPWKLIDIPGHERVRDKYFYNNKDNARGILFLIDSVNFPREIRDVAECMYDLLANRTMQRNKVSVMVACNKQDIPTAKSHNVIKSQLEKELNKLRQTRSAALLGIDDYSSSRNAFIGKQGKDFEFSHVNPIKVEFCECNLKNTQVE-GEVKVDGVRTWLEK 743
            RS +S   +V+L+GLCDSGKT LF +L TG    TQTSI ++   +       G    LID+PGHE +R ++    K +AR I+F++DS  F RE++DVAE +Y +L +    +N  S ++ACNKQDI  AKS  +I+ QLEKELN LR TRSAA   +D  SS+  A +GK+GK+FEFS + P+KVEF EC+ K  + + G   +  +  WL K
Sbjct:   58 RSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCA-VYRVNNNRGNSLTLIDLPGHESLRLQFLERFKSSARAIVFVVDSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDS-SSTAPAQLGKKGKEFEFSQL-PLKVEFLECSAKGGRGDVGSADIQDLEKWLAK 269          
The following BLAST results are available for this feature:
BLAST of TCONS_00072724 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRPRB1.311e-4946.05Signal recognition particle receptor subunit beta ... [more]
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