TCONS_00072507 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072507
Unique NameTCONS_00072507
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072507 ID=TCONS_00072507|Name=TCONS_00072507|organism=Clytia hemisphaerica|type=transcript|length=1180bp
aaagcctgggatacacggggaagAGGTTGGGTGTGGTCCTGCTGATTACC
CATAactcatttcgactgtgaatgAAATGGCGActatgtttcttataaaa
aaaactttttcgttaAGTTACGTGCATGCATCACATCCGTTTGTGCCACG
AATTTCTGTGGTCATGTTGACTATATAAAAAGTAGCCAGTTGAAGGAGTA
GAAAAATGTTTGGTTAGTGTGACCATTTTCAAGCTTCAAACGGGTTAAAT
TCGAAGACACATCATCAGCCATTCACAGCGAAACATTCCAATTTTCAAGA
TGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGCAGCAGTT
TTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAAAGTATATTTTGA
TATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTATGGGATTGTATG
GTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAATTATGCACAGGC
AAgAATGGTTATGGATACAAAGGCAGCAAATTTCACCGTATCATTCGTGA
TTTCATGATGCAAGGAGGAGATTTCACAAATGGTGATGGAACTGGTGGTA
AAAGCATCTACGGGGAACGTTTCCCAGACGAGAACTTTGACCTCAAACAC
ACAGCACCAGGACTTCTTTCGATGGCCAATGCCGGACCAGACACTAATGG
ATCACAATTTTTCCTCACGTACGTCTCAACTCCATGGTTAGATGGTCGAC
ACACTGTCTTCGGAGCTGTCTTGGAAGGAATGGACATCGCCCGTAAAATC
GAGAAACTTTCAACTGATCGACGTGATAAACCAACGAAGGACGTCGTGAT
CACTGACTCTGGTTCGTTAGAAGTCGCTGCACCTTTCGTTCATATCCCAA
AAAACGACATTTAATCGAAAGCTGTTCAAATATTCGAATAGGGTTACTTT
AAATTAATATTTACCATTACCTaacattttttatacaaaacttATCAAAC
CTTTGTTTGTTTTCCATGTAgcttgtaaaattttttttacgatAACTTTT
CACAATTCACAAAGATATAACGAAAAATTAAACTTAATTCTTATTATTGG
ACTTatctggaggtcctataaattaacccatgccCGTTCGTTCatttgtt
cgttcgtttgttagtCTGTTTCCTatccag
Run BLAST on NCBI

protein sequence of TCONS_00072507-protein

>TCONS_00072507-protein ID=TCONS_00072507-protein|Name=TCONS_00072507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MASTHVLSLLLLVLAAVFCSADKKYTVTKKVYFDIQVDGKPEGRIVMGLY
GETTPKTVKNFYELCTGKNGYGYKGSKFHRIIRDFMMQGGDFTNGDGTGG
KSIYGERFPDENFDLKHTAPGLLSMANAGPDTNGSQFFLTYVSTPWLDGR
HTVFGAVLEGMDIARKIEKLSTDRRDKPTKDVVITDSGSLEVAAPFVHIP
KNDI
Run BLAST on NCBI

transcript from alignment at scaffold_78:217720..226397-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072507 ID=TCONS_00072507|Name=TCONS_00072507|organism=Clytia hemisphaerica|type=transcript|length=8678bp|location=Sequence derived from alignment at scaffold_78:217720..226397- (Clytia hemisphaerica)
AAAGCCTGGGATACACGGGGAAGAGGTTGGGTGTGGTCCTGCTGATTACC
CATAACTCATTTCGACTGTGAATGAAATGGCGACTATGTTTCTTATAAAA
AAAACTTTTTCGTTAAGTTACGTGCATGCATCACATCCGTTTGTGCCACG
AATTTCTGTGGTCATGTTGACTATATAAAAAGTAGCCAGTTGAAGGAGTA
GAAAAATGTTTGGTTAGTGTGACCATTTTCAAGCTTCAAACGGGTTAAAT
TCGAAGACACATCATCAGCCATTCACAGCGAAACATTCCAATTTTCAAGA
TGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGCAGCAGTT
TTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAAAGTATATTTTGA
TATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTATGGGATTGTATG
GTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAATTATGCACAGGC
AAGGTAAAAAAAAGTTGAGATTTTTCATTCAGCAGATACAGTGTAGACCT
AAAGCTCTAAAACAGCATCTAATAACATGAAAACCAGAATATGATTCTTC
AATGGGAATCAAAACTATAAAGTGCACTTACAAACATCAATTTGTCAGAT
CTCACAAAATTAATAACTACACTGTCATCATTGACAATAAAACAAACGAT
TTTCTGTCAAGAGCCTTGTAAACATTCCAACAACTTCCATCGAAATGATC
AATCAAAGCTCAGTTTACCATTTTAACGCGGTCCGAAGATTGAGCCGAGA
ACTCTCGCATAACGCCCGAGCTCCCGCGCGGCGCGCGCCGCGGGGATGAA
AAACTTCAATCTGTCAATCATTTTCTCAAGCGAAGTGTACGCGAAGTGAT
TCTAGCTTTACGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCTTTGCGGGATTTTGG
CTCAAGTGCTTGAGTGCAGCATAGGGTACAAAGTCCAAATATGCGTTTCC
CATAATTTTTGTATGAAGAGTTAGGTCTATACTGAGATACACTCATTATT
TTAACTGAAATATCAAATGAACTTTTCTCTTCCTAGTATGTGAGTGAAGT
CGGCTTCCTTTTTTGTATAACACATAAAGTGCGTCCCAAGAAAGCATACA
AATGTCAGGGATTTTTTCAAGCACTTTTCCAGACCCGATCAATCAAACTT
GTCAAACCAATCGAACAATCGAACTAAATGAACTCCATCGAACGATTAAA
GTTTGATTAAAAATTTGATAGAACTCTAAGATTTTTTAAAAGATTGTGAG
TGTTCGATTAAGTGCGATCAATAAGTTTCGGTTCGATCAGTTCGATAAAC
CAATTTTGTTCGACAAGTTTGTGCTGCTCCGCCACCTTATAACTTCTTTT
CAAAGCCAAATTCGGAATGAAAATCGGGAAATTACTTCCTACAACGGGTT
ACACACTTTTCGAAATGGCAATTGGTTGCGTGCAAGGATAAAGTTTTTGC
AAGCGGGGAAGATATGAGTATTTAATATCATTGAACTAATCTAAGTTTTT
ACTGACCGAACTAATCGAACTGCTATTGCTTAAAAAATTGTAGGTGTTCG
ATTAGGTTTGATTAATTTTTTTAATCAAACTTTAATCATTCGATGGAGTT
CGATTAGTTCGATTGTTCGATTGGTTCGACAAGTTCAATTGATCAGGTCT
GGACTTTTTGAGCTACTACCGTTTTTGTAAAATTAGATTGTGTTTTTGAT
GCGTGACAAAACGTGAGCGAAGCGAGAATTTTTTTACTCCTAATTTGGCC
CTGGATTGCTTTAAACAAGAACAAAAAGTGTAAACATTAACGCTGCTTGA
GTATAAATAGAAAGATTTTGGCCCATTTTACGCCGGTCCGGTCCTTTCAA
CGTCTGCCCTTAATCACGCCACGCACGAGCCCTAAAATAACACCAATAAG
GGCAGGCGTAAAAAGGGCCGATTAAGTAAATAGAAAGAGTTGTGGCAAAA
GCGAAAGGAATAACAACAAATCTGTTTTTTTTAATGAAAAAGTCTACAAA
AGAATTTATAAGTAATAATGAGGATTCTCTTAAAAATAACATAAATCTAG
CTATTTTAAGTCTTTAGATTTTACTAATTAAGTTACAATCTTTTCAACTT
ACTACTGTCACCAAAAAAGACATAGTTTTATGTATTGAGGAACAATGAAT
TTCTAATTTTAAGATAAAAATGTAAAGAAGGAATAATTAAAACAGAATCT
GCTTTTTAGGAAAAAATCTTCAAAAGAATAGAAAATGTTTTCAAATAGTA
AAATAGTATAAACAAAATATAAAGATGCCGCGGGATTGATTAATAATGGT
CTATGGTCAGTTATTTTGCAAACGATNATAAAGATGCCGCAGGATTGATT
AAGAATGGTGGGCGGTTAGGCGGCAGGCGTTCTCTAATTCTTCAATCGGC
AGTTCGGTTATTTTTAATGAAAACAAAAGTTAAAAAGGGCACGCTATCAG
TGAAAGTTATCGTGACATGTTTTATGACAGAAAGTATGATTGATAAACTT
GGTGGAGTTATCAAAACAAATTTGTTGTCGAAGAGATTTAACAGTTTATA
CCAATCGAAAACTCGTCAAAAGCTATATAGAAGACATTTATTTAAAACGA
GTATATTTGATTTCTCAACCTAAAACTCTATATAGAAAATTGAAATTGTA
ATTCTGTATAAAATGAGGCATTTTTCAGAAATGATGTCATAGAAGAGTTA
TGGACCTTTATAACTTTTTATATTCAAATTTTTACTTATTGAGAATGATG
TGATTTTAAGTTTACATAAAAAATGCGTCAATTGTTCACTTTTTCTTTTA
ACGTCATCATTTAGTATAAATTATTCATGGACACATCGGGTAAGGATTTT
TAAACACATTGAGCAGCATTGAGTAATTTTTCTGAGTCTCTAAACTATAA
GCTTTTCAAAATGAGTACTCAATATTTGTCCCTCAATTTCCATATATTTC
ACTTTTTTTGATGCCTGTCTAAGGGTGGATGACAAGAATTTTTGGATAAA
AAAAACCACCTAACCTCAGCGTGGCAAAGGGCAAATCCTCAAAGACTCAA
TATTTGGCATTTTGACCCCCCAATTAAAATTACATTTGCCAGGGATATAA
AGGCTTTAGAAAAAAAACTCAAACCACCTAAAAATTCATTGATACACTTG
GGGAAGGCAAAAGTTATTACTCCCAAAAAGTAAATTTTATAGCAAGATCT
TTATTTCGGGTTTTCTTTCGATCTTTTCAAACAATTGCTAATAAAGTTCA
ACGGGTTTTCCCTCTAACAAAACATTAACCAATGTGGATGCTTTTTCAAA
GAAACACCAAAGAAAAGAAAATAGACTTTGAATCTTTTTACATTTGAATG
TTTATATGTTTACCTTTTTTTGCGAAAGAAGAAGGGGGAAATCTTTCTAA
TCTGCTGCATCTTCCTATTATTTATGCTGACGGAAAGTTCTTTGTTGTTA
TGATTCGAATGTTTTCTCTTTCAAAAAGTTCTGTTCTGATTCAAAAAGTA
AACATCATCTCTGGGGAAATCCCTCTGATTGGAATGTTTACTTAAGAAAC
TCTGCTTTATAACTCGGTTTTAATTCAATTTTTAATTTTATCCATGAATT
TGAGCTTTTAAATGTCTTTTTATTTTCTATTTTGCGTTATTGTCAAGATT
TAGTAGTTTTTGCTGCCTTTTTATGAGATTTTACAGGTGAAATTCTACTT
TTATTTTTATTTTTTTCGCCGACCTACCATCAATTGCTCTAACTTGGGAC
GATTGGTGTCGAAACATGGGATTGTTGATATCTGGCCTGTATTTTCACTT
ACTGTTGAATCACTTTGACAACAAATTTGTTTTGATACTTCCAACCAAGT
TTATCAATTAAACTTTTTCAATCCCGCAATCAGAACCAAATGTTTTTATA
AAGCATTTTAAAAGTATATAATTTGAAGAAGTACCTACCTCTTTGTGCCT
CTTTGTGGCTTTTGCTTGAACAGCTCATCCAACTTGTTGAATTCGATGCT
TCGACATTTCCTAGAGGCTGTTGGACTCAGCTTGCCTGTCTTGCTGTATA
TTTCGTACATTCAGATTGGTAGTGATCATTGAGATCATTTTTGTCTGAAA
ATTGTCTAAGATTTTCAGAAAATCCAATGATTGTTGTGTGTTTGTATGGT
TCTTTAGTACTGGGTCCCTTTTAGTCCCCTTGACATATGAGAAAAGTGCA
ACTTGTTAAAACATTCACCTTTTCTGATCAATGAAAAACATACGTGGATG
AAACATGTTCAAACTTTACAGCCTTTTAGCCTTTTGGGGATTTATTACCA
TGTCTCAGTAACTTGGTACAGATTTTTGGATGCTTCAATTGGCAATCTTT
GCTTGTCATGCTATATTTACATTTTCCTTTCTTGTAAAAGCTACAAACTG
GAGTTTAATCAGAGACTTTGTCCTTGGTTGCAGTATTATCAGAGGATAAG
GTTTTGTAAATCGCCGTTGAAATTTGGATTTTAGGTAATTAGTCCTTCCC
AGGTATATTCCATCAATCTTATTTGAGGATCTGTCGATAATAATATCTGG
GACGATTGGAATGTGAGGAAGTGTCCTTCTTGGAGTGAGTTGGGTTCCAT
TTAAGAAAGATTCAGTCGCTTCAACAGCTTCAGTGATCTGCGTAGGTGAA
TTCGTTATTTGAGACTAAAATCCTCTCAACAATGAAATCTTGTGAGAAAA
GGGCTGGTAAACAAATATTGATGTCTGTTTAAAGAGAATCTTGGAACCTT
TTATGGAATTTCTGTGTATAAATTGCAAGTTTTTCTCTAAATCACATTTC
TTTGGACATTCAGTCTACTAGTCTTTCTCAAATTTGACAATTTATTCCTT
AAATCTGACAAAAGGTTTTGTTTTCGAATAAAATTCAGAATTGTTACAAA
TTGATGAATAGATGTGTTTTTGGTGTTTTTAGTTAATTTTTCATGCTATT
AACGGCACAGCATTTTTTCAATGGCACAGTATTTTTCATAGATTGGTCCA
AACAACGGATTAGAATAGGTGGATTAAGAACTCATAGAAAACACTCCTCG
TTAGGTTATCAAACTTTTTTACGAGTTTGCTAGCAATTAAAACTTGATAA
GTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGGTCCAAACAATTT
TTTATCACCAAGCATTACTTTTTCACCTTAGAATGGTTATGGATACAAAG
GCAGCAAATTTCACCGTATCATTCGTGATTTCATGATGCAAGGAGGAGAT
TTTACAAATGGTGATGGAACTGGTAAGGCTACAAATACATTTAATACATT
TTTTTGAAGATTTATAATGTAATAAGTTCCTAACTTAGAATGCAGCATTT
TTCAGGGGGCTAAGAAAATACCTCCCCCGGCTAAATTTTGAAAACGTAGC
TCCTACCTTTACAAAGCAAAATATTAAATAAATTTGCATGTAAAGCAACA
GTTTTTATATTCTACAGTTCAATGAATTGTTCTAAATGTTTTTTTATTGC
GAACAATTAATTTAAAAAGATAGAAATCAAAATTGTTTATCCTTTTTCCA
GGTGGTAAAAGCATCTACGGGGAACGTTTCCCAGATGAGAACTTTGACCT
CAAACACACAGCACCAGGACTTCTTTCGATGGCCAATGCCGGACCAGACA
CTAACGGATCACAATTTTTCCTCACGTACGTCTCAACTCCATGGTTAGAT
GGTCGACACACTGTCTTCGGAGCTGTCTTGGAAGGAATGGTATGTATTAA
ACAATTTTTAGCTCTCATGCCTTGCAGTAACGTCTTAGATCTGACGCTAT
TTTTACCATAATTTTTATTGGGTCATTTTCAAATGATGGTGTAAGCAAGA
CTTCTTTTAAGAGTTAGCCATTCTAAAACAAATCTTGAAGTGAAAAACGC
TGACTTTACTTTTAAAAGGGAGATAGTGAGAAAGTAAAGGAGTAGAGGGG
TTGGATTATTTTGACAAGTTTTTCGTGAGTTTGTACCATGAAACTTATTA
TATTCTACAGATTTCAATTTTTTTAAGTTTGGGAAAAATTTCTTTTCGAG
AATTGGATTTCGTCTTTATTTAATTATTTTTGAGAGTTGAATAAATTACC
AAAAACCTTCTTTTTTAGGACATCGCCCGTAAAATCGAGAAACTTTCAAC
TGATCGACGTGATAAACCAACGAAGGACGTCGTGATCACTGACTCTGGTT
CGTTAGAAGTCGCTGCACCTTTCGTTCATATCCCAAAAAACGACATTTAA
TCGAAAGCTGTTCAAATATNTTTTCACCTTAGAATGGTTATGGTTACAAA
GGCAGCAAATTTCACCGTATCATTCGTGATTTCATGATGCAAGGAGGAGA
TTTCACAAATGGTGATGGAACTGGTAAGGCTACAAATACATTTAATACAT
TTTTTTGAAGATTTATAATGTAATATAAGTTCCTAACTTAGAATGCAGCA
TTTTTCAGGGGGCTAAGAAAATACCTCCCCCGGCTAAATTTTGAAAATGT
AGCTCCTACCTTTACAAAGCAAAATATTAAATAAATTTGCATGTAAAGCA
ACAGTTTTTATATTCTACAGTTCTGTACAGTTCAATGAATTGTTCTAAAT
GTTTTTTATTTCGAAAAATTAATTTAAAAAGATAGAAATCAAAATTGTTT
ATCCTTTTTCCAGGTGGTAAAAGCATCTACGGGGAACGTTTCCCAGACGA
GAACTTTGACCTCAAACACACAGCACCAGGACTTCTTTCGATGGCCAATG
CCGGACCAGACACTAATGGATCACAATTTTTCCTCACGTACGTCTCAACT
CCATGGTTAGATGGTCGACACACTGTCTTCGGAGCTGTCTTGGAAGGAAT
GGTATGTATTAAACAATTTTTAGCTCTCATGCCTTGCAGTAACGTCTTAG
ATCTGACGCTATTTTTACCATAATTTTTATTGGGTCATTTTCAAATGATG
GTGTAAGCAAGACTTCTTTTAAGAGTTAGCCATTCTAAAACAAATCTTGA
AGTGAAAAACGCTGACTATACTTTTAAAAGGGAGATAGTGAGAAAGTAAA
GGAGTAGAGGGGTTGGATTATTTTGACAAGTTTTTCGTGAGTTTGTACCA
TGAAACTTATTATATTCTACAGATTTCAATTTTTTTAAGTTTGGGAAAAA
TTTCTTTTCGAGAATTGGATTTCGTCTTTATTTAATTATTTTTGAGAGTT
GAATAAATTACCAAAAACCTTCTTTTTTAGGACATCGCCCGTAAAATCGA
GAAACTTTCAACTGATCGACGTGATAAACCAACGAAGGACGTCGTGATCA
CTGACTCTGGTTCGTTAGAAGTCGCTGCACCTTTCGTTCATATCCCAAAA
AACGACATTTAATCGAAAGCTGTTCAAATATTCGAATAGGGTTACTTTAA
ATTAATATTTACCATTACCTAACATTTTTTATACAAAACTTATCAAACCT
TTGTTTGTTTTCCATGTAGCTTGTAAAATTTTTTTTACGATAACTTTTCA
CAATTCACAAAGATATAACGAAAAATTAAACTTAATTCTTATTATTGGAC
TTATCTGGAGGTCCTATAAATTAACCCATGCCCGTTCGTTCATTTGTTCG
TTCGTTTGTTAGTCTGTTTCCTATCCAG

Coding sequence (CDS) from alignment at scaffold_78:217720..226397-

>TCONS_00072507 ID=TCONS_00072507|Name=TCONS_00072507|organism=Clytia hemisphaerica|type=CDS|length=3075bp|location=Sequence derived from alignment at scaffold_78:217720..226397- (Clytia hemisphaerica)
GACATCGCCCGTAAAATCGAGAAACTTTCAACTGATCGACGTGATAAACC
AACGAAGGACGTCGTGATCACTGACTCTGGTTCGTTAGAAGTCGCTGCAC
CTTTCGTTCATATCCCAAAAAACGACATTTAAGTGGTAAAAGCATCTACG
GGGAACGTTTCCCAGACGAGAACTTTGACCTCAAACACACAGCACCAGGA
CTTCTTTCGATGGCCAATGCCGGACCAGACACTAATGGATCACAATTTTT
CCTCACGTACGTCTCAACTCCATGGTTAGATGGTCGACACACTGTCTTCG
GAGCTGTCTTGGAAGGAATGGCAGCAAATTTCACCGTATCATTCGTGATT
TCATGATGCAAGGAGGAGATTTCACAAATGGTGATGGAACTGAATGGTTA
TGGATACAAAGATGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTT
CTTGCAGCAGTTTTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAA
AGTATATTTTGATATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTA
TGGGATTGTATGGTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAA
TTATGCACAGGCAAGGACATCGCCCGTAAAATCGAGAAACTTTCAACTGA
TCGACGTGATAAACCAACGAAGGACGTCGTGATCACTGACTCTGGTTCGT
TAGAAGTCGCTGCACCTTTCGTTCATATCCCAAAAAACGACATTTAAGTG
GTAAAAGCATCTACGGGGAACGTTTCCCAGACGAGAACTTTGACCTCAAA
CACACAGCACCAGGACTTCTTTCGATGGCCAATGCCGGACCAGACACTAA
TGGATCACAATTTTTCCTCACGTACGTCTCAACTCCATGGTTAGATGGTC
GACACACTGTCTTCGGAGCTGTCTTGGAAGGAATGGCAGCAAATTTCACC
GTATCATTCGTGATTTCATGATGCAAGGAGGAGATTTCACAAATGGTGAT
GGAACTGAATGGTTATGGATACAAAGATGGCGTCGACACACGTTCTCTCA
TTGCTCCTCCTCGTTCTTGCAGCAGTTTTCTGCAGTGCAGACAAGAAATA
TACGGTTACAAAGAAAGTATATTTTGATATTCAAGTTGATGGCAAACCTG
AAGGACGAATTGTTATGGGATTGTATGGTGAAACTACTCCAAAAACAGTG
AAGAATTTCTATGAATTATGCACAGGCAAGGACATCGCCCGTAAAATCGA
GAAACTTTCAACTGATCGACGTGATAAACCAACGAAGGACGTCGTGATCA
CTGACTCTGGTTCGTTAGAAGTCGCTGCACCTTTCGTTCATATCCCAAAA
AACGACATTTAAGTGGTAAAAGCATCTACGGGGAACGTTTCCCAGACGAG
AACTTTGACCTCAAACACACAGCACCAGGACTTCTTTCGATGGCCAATGC
CGGACCAGACACTAATGGATCACAATTTTTCCTCACGTACGTCTCAACTC
CATGGTTAGATGGTCGACACACTGTCTTCGGAGCTGTCTTGGAAGGAATG
GCAGCAAATTTCACCGTATCATTCGTGATTTCATGATGCAAGGAGGAGAT
TTCACAAATGGTGATGGAACTGAATGGTTATGGATACAAAGATGGCGTCG
ACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGCAGCAGTTTTCTGCAG
TGCAGACAAGAAATATACGGTTACAAAGAAAGTATATTTTGATATTCAAG
TTGATGGCAAACCTGAAGGACGAATTGTTATGGGATTGTATGGTGAAACT
ACTCCAAAAACAGTGAAGAATTTCTATGAATTATGCACAGGCAAGGACAT
CGCCCGTAAAATCGAGAAACTTTCAACTGATCGACGTGATAAACCAACGA
AGGACGTCGTGATCACTGACTCTGGTTCGTTAGAAGTCGCTGCACCTTTC
GTTCATATCCCAAAAAACGACATTTAAGTGGTAAAAGCATCTACGGGGAA
CGTTTCCCAGACGAGAACTTTGACCTCAAACACACAGCACCAGGACTTCT
TTCGATGGCCAATGCCGGACCAGACACTAATGGATCACAATTTTTCCTCA
CGTACGTCTCAACTCCATGGTTAGATGGTCGACACACTGTCTTCGGAGCT
GTCTTGGAAGGAATGGCAGCAAATTTCACCGTATCATTCGTGATTTCATG
ATGCAAGGAGGAGATTTCACAAATGGTGATGGAACTGAATGGTTATGGAT
ACAAAGATGGCGTCGACACACGTTCTCTCATTGCTCCTCCTCGTTCTTGC
AGCAGTTTTCTGCAGTGCAGACAAGAAATATACGGTTACAAAGAAAGTAT
ATTTTGATATTCAAGTTGATGGCAAACCTGAAGGACGAATTGTTATGGGA
TTGTATGGTGAAACTACTCCAAAAACAGTGAAGAATTTCTATGAATTATG
CACAGGCAAGGACATCGCCCGTAAAATCGAGAAACTTTCAACTGATCGAC
GTGATAAACCAACGAAGGACGTCGTGATCACTGACTCTGGTTCGTTAGAA
GTCGCTGCACCTTTCGTTCATATCCCAAAAAACGACATTTAAGTGGTAAA
AGCATCTACGGGGAACGTTTCCCAGACGAGAACTTTGACCTCAAACACAC
AGCACCAGGACTTCTTTCGATGGCCAATGCCGGACCAGACACTAATGGAT
CACAATTTTTCCTCACGTACGTCTCAACTCCATGGTTAGATGGTCGACAC
ACTGTCTTCGGAGCTGTCTTGGAAGGAATGGCAGCAAATTTCACCGTATC
ATTCGTGATTTCATGATGCAAGGAGGAGATTTCACAAATGGTGATGGAAC
TGAATGGTTATGGATACAAAGATGGCGTCGACACACGTTCTCTCATTGCT
CCTCCTCGTTCTTGCAGCAGTTTTCTGCAGTGCAGACAAGAAATATACGG
TTACAAAGAAAGTATATTTTGATATTCAAGTTGATGGCAAACCTGAAGGA
CGAATTGTTATGGGATTGTATGGTGAAACTACTCCAAAAACAGTGAAGAA
TTTCTATGAATTATGCACAGGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044991XLOC_044991Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072507-exon-scaffold_78-1575043694:225895..226397TCONS_00072507-exon-scaffold_78-1575043694:225895..226397Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1575043694:220148..220166TCONS_00072507-exon-scaffold_78-1575043694:220148..220166Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1575043694:218975..219046TCONS_00072507-exon-scaffold_78-1575043694:218975..219046Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1575043694:218497..218684TCONS_00072507-exon-scaffold_78-1575043694:218497..218684Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1575043694:217720..218117TCONS_00072507-exon-scaffold_78-1575043694:217720..218117Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1510915933:225895..226397TCONS_00072507-exon-scaffold_78-1510915933:225895..226397Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1510915933:220148..220166TCONS_00072507-exon-scaffold_78-1510915933:220148..220166Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1510915933:218975..219046TCONS_00072507-exon-scaffold_78-1510915933:218975..219046Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1510915933:218497..218684TCONS_00072507-exon-scaffold_78-1510915933:218497..218684Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1510915933:217720..218117TCONS_00072507-exon-scaffold_78-1510915933:217720..218117Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1491911889:225895..226397TCONS_00072507-exon-scaffold_78-1491911889:225895..226397Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1491911889:220148..220166TCONS_00072507-exon-scaffold_78-1491911889:220148..220166Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1491911889:218975..219046TCONS_00072507-exon-scaffold_78-1491911889:218975..219046Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1491911889:218497..218684TCONS_00072507-exon-scaffold_78-1491911889:218497..218684Clytia hemisphaericaexon
TCONS_00072507-exon-scaffold_78-1491911889:217720..218117TCONS_00072507-exon-scaffold_78-1491911889:217720..218117Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072507-proteinTCONS_00072507-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_78supercontigscaffold_78:217720..226397 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.530069	1.02283	0	0	0	0.382832	0	0	0	0	0.3105	0	0	0	0.176533	0	0	0.233294	0	0	0.456427	0	0.596996	1.15744	0	0	0	0	0	0.551051
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
IPR024936Cyclophilin-type_PPIase
IPR020892Cyclophilin-type_PPIase_CS
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Blast
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BLAST of TCONS_00072507 vs. Swiss-Prot (Human)
Match: PPIB (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.515e-69
Identity = 123/211 (58.29%), Postives = 154/211 (72.99%), Query Frame = 3 
Query:  261 IISHSQRNIPIFKMASTHXXXXXXXXXXXXFCSADKKY--TVTKKVYFDIQVDGKPEGRIVMGLYGETTPKTVKNFYELCTGKNGYGYKGSKFHRIIRDFMMQXXXXXXXXXXXXKSIYGERFPDENFDLKHTAPGLLSMANAGPDTNGSQFFLTYVSTPWLDGRHTVFGAVLEGMDIARKIEKLSTDRRDKPTKDVVITDSGSLEVAAPF 887
            ++  S+RN+ +   A+    S+  L+L     + +KK    VT KVYFD+++  +  GR++ GL+G+T PKTV NF  L TG+ G+GYK SKFHR+I+DFM+QGGDFT GDGTGGKSIYGERFPDENF LKH  PG +SMANAG DTNGSQFF+T V T WLDG+H VFG VLEGM++ RK+E   TD RDKP KDV+I D G +EV  PF
Sbjct:    1 MLRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPF 211
The following BLAST results are available for this feature:
BLAST of TCONS_00072507 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIB1.515e-6958.29Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
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