TCONS_00072507-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072507-protein
Unique NameTCONS_00072507-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072507-protein ID=TCONS_00072507-protein|Name=TCONS_00072507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MASTHVLSLLLLVLAAVFCSADKKYTVTKKVYFDIQVDGKPEGRIVMGLY
GETTPKTVKNFYELCTGKNGYGYKGSKFHRIIRDFMMQGGDFTNGDGTGG
KSIYGERFPDENFDLKHTAPGLLSMANAGPDTNGSQFFLTYVSTPWLDGR
HTVFGAVLEGMDIARKIEKLSTDRRDKPTKDVVITDSGSLEVAAPFVHIP
KNDI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044991XLOC_044991Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072507TCONS_00072507Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom
IPR024936Cyclophilin-type_PPIase
IPR020892Cyclophilin-type_PPIase_CS
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 149..164
score: 53.88
coord: 78..90
score: 72.51
coord: 121..136
score: 82.22
coord: 49..64
score: 48.69
coord: 136..148
score: 59.45
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 33..186
e-value: 5.2E-49
score: 166.5
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 32..189
score: 46.832
IPR029000Cyclophilin-like domainGENE3D2.40.100.10coord: 15..196
e-value: 1.4E-77
score: 259.0
IPR029000Cyclophilin-like domainSUPERFAMILY50891Cyclophilin-likecoord: 26..190
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePIRSFPIRSF001467Peptidylpro_ismrsecoord: 17..195
e-value: 1.2E-81
score: 270.5
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 73..90

Blast
[Close]
BLAST of TCONS_00072507-protein vs. Swiss-Prot (Human)
Match: PPIB (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 6.642e-86
Identity = 119/191 (62.30%), Postives = 144/191 (75.39%), Query Frame = 0 
Query:    8 SLLLLVLAAVFCSADKKY--TVTKKVYFDIQVDGKPEGRIVMGLYGETTPKTVKNFYELCTGKNGYGYKGSKFHRIIRDFMMQGGDFTNGDGTGGKSIYGERFPDENFDLKHTAPGLLSMANAGPDTNGSQFFLTYVSTPWLDGRHTVFGAVLEGMDIARKIEKLSTDRRDKPTKDVVITDSGSLEVAAPF 196
            S+  L+L     + +KK    VT KVYFD+++  +  GR++ GL+G+T PKTV NF  L TG+ G+GYK SKFHR+I+DFM+QGGDFT GDGTGGKSIYGERFPDENF LKH  PG +SMANAG DTNGSQFF+T V T WLDG+H VFG VLEGM++ RK+E   TD RDKP KDV+I D G +EV  PF
Sbjct:   21 SVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPF 211
The following BLAST results are available for this feature:
BLAST of TCONS_00072507-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIB6.642e-8662.30Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
back to top