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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072366 ID=TCONS_00072366|Name=TCONS_00072366|organism=Clytia hemisphaerica|type=transcript|length=1571bp
AGACGCTTCACAAATCGAAGTACTCTCACTAACTGTCAAGTAAAGCCAAA
GGTTTTTCTCTGAAAACTTTAGGTTAAAAATGAGCTCTTTAAAGGTCCTT
ATTTACCTTTCCTTCGTGGTGATCTTGATCGATCTCGTGGCATGTTCTTT
CGAGTTAAAGCTGATGAATTTTAATCAATATAATTAGATCCAAATGGCAG
TCAGCAGTGATGACAGGATGATGTGATATGGTGGATGATGTCttagattt
taaaaaattgtaCCGCCTAGGcctaccattttgaaaacttttcatgTAGA
AGTAGCACGAAGTTTCTTGCTAACAAATAGCAGGCTAATTAAATACGGGA
TTTGTTTACACGAAGTAACTCCGGCGAAATATGGTAATCGAGAGCGAAGA
TGAAAGAAATTTCTAGATTTTGTTGGTTTATTTTTCTGTGTATCTTTGTA
ATATTCACTGTCACTTCTGCTGAAGAAACGTGTGATAATCCGTATTCTCC
ATTGGTGAACTGTTCTTTACTgccAGAAGAATTTGTGATTTGTGATAAAC
TACTTGATGTTAATGAATCAACAAGAGAAGCTATAGGTTATGGATGCTAT
AAAtaCGGAGGCCAAAAACACGAAGATGTTCTGTTTACAAAGTTGAGGTG
TCAAGCATTGGATGGTATTGAATGCTGTGGAAGTCGGACTTTCCTCCGTG
GGAACGTACCCTGCATTAAGTATTCGGGTCATTATTTTGTAACGACGTTG
TTATACTCGATACTTGTTGGATTCTTCGGCGTGGATCGTTTCTGTCTAGG
ACATACAGGTACAGCAGTTGGTAAACTACTGACCATCGGAGGAGCTGGTA
TTTGGTGGTTTGTTGATATTATTTTGTTGGTTACTGGAGAGCTACAACCA
GCAGACGAGAGTAACTGGAACCCCTATTATTAAAAGATGCTTCGATTCAT
TGTAGATGCACGATGGAAGTCTGAATGCTTCATATCCGGAACATTTCTTg
cttaaattttgaaactttcaaattGAGGTGCAAGTGgttctgggtacgag
attggtGCAACATAAACGAAATTGTGGATTGACTGTTGAAAAGTTAAAAC
AGCGTTTAAATTACGCACGTATGGGAGGACTGGGTTGGTTGTTGTTTTAT
TGAAAGCGAAGTATTTTTACAGACAAAATCAatacaatttcaaaagttta
aagtcaACTTCAGTCTGTCCTAAAGAAAAACGGAACGCTATTTCGAGAGA
ATATTCTCCATAACGATACAGTATACAAAGTTTCGCTTTatgtaaaaaat
gtgtactgATATTTTTCATGCTGATATTTAATTCAGTATTAAAATTCGgg
tgtactttttatttttgcgtATCTTTTTATTAATATATAATAGACCCATA
TTTCTACAAACTGACATTCTTTCTAATAAATAACAAGtgacttttatgga
cctacctggttatgcatttaacacatttataattgatatctacgtgacgt
gaacattaaacaatcattcagaacacaaatagtgacgatctattaaaatt
agtcgtttgtttcttatagaa Run BLAST on NCBI protein sequence of TCONS_00072366-protein >TCONS_00072366-protein ID=TCONS_00072366-protein|Name=TCONS_00072366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
MKEISRFCWFIFLCIFVIFTVTSAEETCDNPYSPLVNCSLLPEEFVICDK
LLDVNESTREAIGYGCYKYGGQKHEDVLFTKLRCQALDGIECCGSRTFLR
GNVPCIKYSGHYFVTTLLYSILVGFFGVDRFCLGHTGTAVGKLLTIGGAG
IWWFVDIILLVTGELQPADESNWNPYY Run BLAST on NCBI transcript from alignment at scaffold_77:311960..323616+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072366 ID=TCONS_00072366|Name=TCONS_00072366|organism=Clytia hemisphaerica|type=transcript|length=11657bp|location=Sequence derived from alignment at scaffold_77:311960..323616+ (Clytia hemisphaerica)
AGACGCTTCACAAATCGAAGTACTCTCACTAACTGTCAAGTAAAGCCAAA
GGTTTTTCTCTGAAAACTTTAGGTTAAAAATGAGCTCTTTAAAGGTCCTT
ATTTACCTTTCCTTCGTGGTGATCTTGATCGATCTCGTGGCATGTTCTTT
CGAGTTAAAGCTGATGAATTTTAATCAATATAATTAGATCCAAATGGCAG
TCAGCAGTGATGACAGGATGATGTGATATGGTGGATGATGTCttagattt
taaaaaattgtaCCGCCTAGGcctaccattttgaaaacttttcatgTAGA
AGTAGCACGAAGTTTCTTGCTAACAAATAGCAGGCTAATTAAATACGGGA
TTTGTTTACACGAAGTAACTCCGGCGAAATATGGTAATCGAGAGCGAAGA
TGAAAGAAATTTCTAGATTTTGTTGGTTTATTTTTCTGTGTATCTTTGTA
ATATTCACTGTCACTTCTGCTGAAGAAACGTGTGATAATCCGTATTCTCC
ATTGGTGAACTGTTCTTTACTGTAAGTATACTCATTTGCCCCAAATTACC
CAGAGTAATTACTTGGGTAAAAGGGGGTACAGCTACAGGTCAGGCAGGGG
ATGTGGCTGCTGGTCCATCAGGATCAGGGTCCAGCGTATCTTTATTCAGT
CATCCGGGGtagggttgcaaaaacaccaaaatagaaaaatcagtacctcg
tagggtacctttttggggaaatttagaaaaaaatagaacattttgagaac
attttggaatttcagtcctattcattcagggtcacttttttcataaaaca
agACCCAGCCACTTTACAGaacagggtccatttttcgaacttcagcaGCA
CACCCCTGTCGGttggcaagggtagtacccccctcTGGGAGAATTACCTT
AGCATAGGTTCAACTCCAGGACCAAGACACAAATGCAGACAGACACACTG
CCATATTTCTAAGCCATATAGTTTATAGTTATGATGGACTATTCATAATT
CCTATAACCCAAACCCCTACAtaaatttaacattttattaATTCAacaat
ttattattattattaatattatgataCATATTTCAGTCGAAAAAGATGGC
AATATTAGTTGCTGTTGCTAACTTAACATAATTTGCATTTTTCGGTCAAT
TTTGATTATGGTGAATTTAATTAATATAATTCTTACCAAGTCCATTCTTA
TACAACCACCACAAAAAAGAAAAGTGGCGCATTCCTGGTTTTGAATGAGA
AAAGAGTGTATACTACTACTCTACCTCAATGCATCTTTTTGTCAGAGGGT
AATTACCTTGTATGGACACTGTCAACAAGAAGGTACAAATCATGCACCAT
gccaaaaatggcttaaaataaGGCTTTTGTAATAACTTGCTCAAATTACA
TAAAAAATTAGGGAAAATCTCAGAAAACCTCTATATTTAACATTAGAAAG
ggtaaaagatggttaaaaTCACTCCAGGGGTTAAATggcccaaatatggc
taatttgttGTCCAGACAAAAAGATTGTCCTAAAAAGGGCCATTTAAGCT
TAGTCTATACCAAACCTAGTTTAAACTAAAGCTGAATGGTTGTTTTAAAC
TCCTAATAGTAAAATGGCCCACTTTTTACGTTCTTGGGTCCCAAAATAGG
ACAATAAAGTTGTCCTTAATTTTAACCgtgatattttacaaaaaggaCAA
TATCATTGTCCTTTTTGGGACCGAATAACCAAAATTTGCTACCTGAAAAT
TAATTGTGAACCATTCATACagttttgtgcaaaattttagcttaaaTAAG
CTGATAAAATGGTTGAATCCCTAGTGTTAAAGCACAAAAAGTGGTTAATA
CATTTGCCTTTAGGACAACAGATTGTCCACGAGAGGGGCCGTTCAacgat
tttaattttaattatctTATGTTTGAGGTATTTCGAGCCTGATCTGTAAG
GATcttgaatgaatttttgttttaaagttgttttttaggacaatttattg
tccatttttggacctttttacaagattttaaaattggaatctcatagtgt
gcaccccccccagaatagtggggggggggtttgctgatttgggtcgaaaa
ttttcaggtgggatttggggttttccaggttttaggtgggagaaacaagt
taaggtgggagTTAATTTCTTTAGGTGGGACTTTGGGTGTTTTGGAAAAG
TTtaaagtaaaatttcttattttcagattttatgatatattttttttata
tattttataaataattttttaccatgctaaacttttctttttattattac
aGGTCATTTGATGTttgaataaatatctttaagaatgatttattttttac
ttttgcttaccttattacacttatatgACTAGTCAAGTAAAAGTACGCAG
GTAAAATGAGTGCAAGAATTTATTAACGCGAAAGGCAGGGTTTTCGAAAA
TAACCACGGCTCGAATTTTGTTTAAACATTTGTAATAATTAACGTGAGGT
AAGCAATTCGCTTTAATAACATGAGtagttatataagtgtaataaggtat
tttgagaaaatggaACTATACATATACGAATAATTACCACagtaaaataa
tgataaaaactaTACTTACATAATGTGAACAATAcgcaagaaatattttt
gctattatttttaacaatcataatcgtatattgacgaacaatgttttgcg
gaccgtaatgtacaaagcaaaaaacgggttttgtattaagaaaaattttc
ttccggTAAACAATTTCCCCTACTGtatattgattcaagttataaaaaag
aaagaacaagTATTTTTAGCTtggatctgggagtctgggctgaaggtggg
aattttaggataaggtgggacctgaattttcaggtgggacctggaacccc
cttgcacactatgaatCTTGTTGTAGGATAATGTTTTACATGTGTaccaa
attttgacttgatCGGAGCACCCTATCAAGACTTATTGATCTTGGATAAC
TCATTATCCTTTCAGTTAGGACAATTCATTGTCCTTTTTAGGACCACAGT
TCAAAGGCATGTGTCTCTTTAAGTATACCTTTTACAGTTACGGGACCAGC
ATGGGTCCGAAGACAGACCTTTTAACTTAACCATGGGTATCAATGTAGGG
CCTAGTAGACATTTATGTGAGTctgtaattttcaaaactagTCAGGGGTG
TAAAGATGgtgcaaaaacagccattttttGTACCTTCTTTTTGACAGTGT
CCGTATTCAAAATTGTCCAGTAGGTGTCAGTGAGGtctttttgacaaaat
tgaCAAATCAAGCAATCAAGTGACCCTCTAATGAAAATTATTCAATTAAT
ATTTCAGAATCTTAATATTATACCTATATGCATTTCCATTCATTCAGAAT
TTTAATGTTGATTGCATCAATAGATTTGTCATATGTCATTtgaatcccgg
ggggggggactagggttgcaagctgatggggggtgccgcccgactttcga
ccctcggacccttaccgggactaaaaaggagaaaacaaaggaaaattttt
tgaatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggtg
ccgcccgactttcgaccctcggacccttaccgggactaaaaaggagaaaa
caaaggaaaattttgtgaattttatgacccttaccgggacaaatttgacc
aagtttgaccaaatttcgatccttccgggggtaaaaagttgaaattttcc
tatttctccgacccttagtgggactgaaatttgattgtctGATATTTCTG
ACCCTAAGCgagactttggaaatccaaaaaaggtacccttaagcttaagg
gcggcacataccgtaccctccatttgcctaattaccccctcccccgggtt
TGAATCTTACTTTGAGGTGTCTTTTTTATGTATTTCATAATGCCAAAATC
AGTTATTGAAATCTTTGACCAAGCCAGCACTTTCCTCTTGTTAATATGAT
GGGAAGCAGTTTTTGCCATGCAAAATAATGTTTGGGAACTTGTCTTAAGT
CACCTGAGATGCATATAAATTCTTAAaagtaatttaaaatttcattttta
ggccAGAAGAATTTGTGATTTGTGATAAACTACTTGATGTTAATGAATCA
ACAAGAGAAGCTATAGGTTATGGATGCTATAAAGTAAGCAGATTTATTAG
AAAGTTTGGAAATGCATATCAAAACCCAGTATCAGTGATAAAAATTTTTA
CCGGGTCCGATTTTCAGATCTCATAATCTCAATGTGTCTGTAGGTTTATC
TACCGAGGCAGAACCTGGCAGAAcgaccgggtcactgatacaggggtgtg
tcAAAGAACCGGAGCGATATCATCATCGAGGACTTACCGTAGTATATCTG
CGTATAATGCTATGAATTATTACTGCTACAGTAGTACCAGCTAGTATTAC
TTTGGCATTTTCCTGTTTCCTGAAACCTGTTTTCGCGAGTACTAAATTGG
AATTACATACACTTAAGGTTGTAGAAATACCTTAAATGCTGTCCTTCAAA
GTAAATTTCAcgaatacacgggttgcaaaattatatcaatgcagtcaaaa
catgcgATTACttgaaaaagttcacgtgattttattcccatgttaggggg
ggggggggcaaggttTATGGTGACACGGTATCGGCCTTTTTTCTGTCCGG
TCTTTcggtattttaagaaaaaagtacggtattccggtatttgaAATGCT
GCCGGCTACAgtaaattgcctaaaaatgctctggtatttcggtatttact
CGTAAaacttcggtatttcggtaactttaaaatctttccgAACCGTTTTC
TTCATAACATAAAGAGACTTCCAAAAATCTAAACGTTCTTAAATTTTACA
AAAGTACACCCATGTTCAGCCATGTTTTCTAAAACGATCAGTTTTGACAC
AGTATGTATGCACCACTTTAGCTCCCAAACTTCTGGGGTCAGAAACAGCT
CTACCTCTAGTCAGTCTAGTGGCAACTTTTTTGTGGTTATAGTCAATCCA
CTATCTTTTAAATAATGACTTTTTACAAATAAAGTGCTACCTTCTCTCAA
GCACTTACaaatgtcttttttctttattagagtAGAATTTGATCCAAAGG
CAGACGGACGGACTAAACCAATCTGGAGTCCCTTTCCCTAATTTCACATC
ACAAAACACACTTTTAGCCACaataggggccgtccacatagtacgtacgc
actaaggggggggaggggtcttctcaaaaacgtatgcttgcgtacagggg
gaggggaggggtcaaaggaaaatgtacgtacgcagagaaaaaattttcat
agcccttttttgcttgttttgttGTCGatttttacgcttcttatacccat
caaagaaaagaaaaagtttcttaataaacattgagtttcatgtatgaaat
aaaggtccgaaccgaacgatttgaattcgagggggagggggtgaatgaaa
aagtacatacttaccagggggtatagccatttgcgtacgcttgcgtacag
ggggggggggggggaaagaaAAAGTACATTCTTTCAAGGGGGTATTCCcc
tttgcgtacgcttgcgtacagggggggggggtactcgattttcgacattt
tagtgcgtacgtactatgtggacggccccataGTGGACCTGTAAATTAGC
ACAAATTTTTCGCGCTCTCTTCGCTCGCATTATTttgtttaaatgttttt
ttgatttgactCCCTAATCTTGGCCAAGCAACCATGTTATTGCCCTTTTC
TCAAAGGAAGGTGATGGGATAGGTACTGCCTAATTCTCAAATTAGAACTA
AAGAATTATccataaaaagagctttttgagGTACTTAGTTACAATAGTAA
AACCATTCTAAAACATAATGCTTTTAGCCAAATAAGAAAgtgttgaaatc
aaaattttcttcggTCGACAGAAAGCATGGTTGCACTTTGTCAGTAATTA
AACTTTATCTTCTATGCTATTTGCACTTGGAAATTAGATCGTTCGTCTGA
TAAACAGTGTATCCCTTACTCCTCATTTCATCAACAATTCAGTTGATGGA
AATTCGGGAAAATATtgccggtatttcggtattcagTGCCccttgaaccc
cccccccccatgttacttgctttacaacttacagctgataactttaatta
gtgtcaataaattcgaatcaatcagaaataaatgtcatgtaacaaacACA
TAAagatttcgagtaaaagcgtgatttgtttTCAGACTTTTTACTTTGCA
ACCTGCGTATTTTTGACTTTACGAAAGTTTCTGCTTTCGATAGCTTTGTA
CGTCTAAATTAACGTTCTTCTAATGATGGTGGTTTAGACCTAATCCGAAA
TTtcgggaggctgaaccgggagccgggaggcgggaggctgaaatcgaaag
tgggagacgggaggcgggaggctgaaaacgaaagtgggaggcgggaggct
gaaattgaaagtgggaggcgggaggctgaaaacgaaagctgGGAGgcggg
agtcgggaggctgaaatcgaaggTGATAGGCTGAAAACGAGTAGACGAAA
GGCCGAAAACGAGAACTAAGTcgcaaagataaacaaaatcttGTGAAGAT
AAACAAAGACAACGGTTTAAAAACACTCTCACGAGTTCCGTATCGTTTGT
TAGTATACGctttttcaattataataaGGAACCTTACGGAGCCTGGAGTA
TGTAATTGATCTAAACAGTTAGCCTAGCCCATGAGGTCAGTTCACCCGTA
TATGCAGTAGTgtttttataaggatttttaaattgaccaattttgtatAC
GTTTTTGTATCGGCTCGATAGTACATTGCTAGCGTGCCGGACTCAGAATC
ATTGACAAGAGACTTTGGtagttcgagccggggtcaaattttcagttttg
aaaaaaaattctaagtcgcAAGGAGTTCTAAGCATTTCGCTACATTTCAC
TCTTGGTGTTTTCAAGTTAGTCTTTAATTATTGGAAATatgaattaaaaa
ggaaaatactttcatttgtctttttttctaNTTTAATTTTAATTAAATTC
TCCTTCATCACCAAATAACGTTTTGGTATAACACTACTATGTCccttaaa
atgaaataaataagaGCGTCTACCTACAATGTACagtaaaaatttcgttt
ttagggtaaaataaaaaaataatccttatacCGTGTATGttgacaaaaca
gacaaaaaaacacaattttcgcgtcgcaccgtataggattcgaactctcT
GAAATTATTACCCTCTAGTTGCCGTTTCATCGACTTATCCACTCGGCCAC
GCAGGTGATGTGTAAGTGAAGTGAACAATGATTATGATGAGACCTTTATT
TTGCCATGACTTGTATAATTTTACTCTGTCAAGGTATTGACTTCTTAAAG
GAATGATTNATCAGtcagttttgcttttcttttcacttgtggttctgaaa
aaagtgtttataagataataaaaaaagacgaaagacgatttttttgcatt
tttttagttgaaagttttggaacattggattttcaagagaagggaaagtc
ataaaactcttgactcttgactctccacccgctaaccaacctgatccatt
ttgaaatactgtacttgaaTCAAACTGCATTGAGCTGAGGTGACACTCCC
GGGGGGGNGCtatatttttatgtaaaattatttttataaagagaaaCGCT
TCCTAGGATTAAAGGAAAAAAGAGAGAACGGAGAAAACACTTGGTTTCAA
Aacatactttttgaaatattttttttgatggattgtgtgtatttataaaa
aataaatgatctgATTTTTCTTAGCTCTTTGTTACCTATTCCTTGACCAA
AAACGTTTGTGCGTGGCCTTATAAATGAGCCTATTCTATAAATTagaatt
atgtttgaaaacgagaaatattttagcgatgaacggataataaaccattt
atttggacgcagtctcatccaatatgaaaaatatggggctacgagaaaag
atattggactcggcgaagcctcgtccaatatcttttctcgcacgcccaac
atttttgcatattggattcgactttgtccaataactgcttaatatTGACC
GGCCACGTGACATTAATCATCCaatcagttttcttaaaaatgattgacag
ttgtattgcagggctataaacacctttattaaccgaaattagtgctttaa
acgtcgaattacaagatcttttttcgagctaatgaaggaaaccatttcat
ttggacaattattagttgggtgaaagtgactaagttgtaaatttcgtcgg
ggaaaagtgacgaatttgaaattttggtcgggggaaagtgacgaaaatgg
ctctaggtgacgaaattttttccCTACGAAAAAAACCCCGACTAGATAAA
ActccgactaaataaaactctgaTATTTTTTCCCCCGTTAAGGTATTGGA
TCAGGTCCGGCTTGAGGAGTCGCTAGTTGAAGTCTTAACCAGTTTTTAAA
GCTGGTAAAACATTCAGCTTGAGCTCATTTTACGGATCAGATTTCACACT
AAAAACTGGTAAAGAACTCGTCTCCCAGCTGGTTAAGAATTCTGCCAACT
GGTTAAGAATTCAAACAGCGACCCCTCAAACCGGACctcagtggaacctc
taattagcggacaccatcggggaaaggggttagtgtccgctaattagaag
tgtccgccttttagaaacttttgatctcggagctccaattttgaaattag
gccatcccagggtgtcgaaaatacaaaattggggtctaaagtacttatct
gcatTCACTAGGTcatagaagaacaagagaaaggttattaaaacgcaaca
agttagtttttaacaaatgaaagaaaatctagaaatataacaccaaaatt
gaaaatacaattcGTTGAATGGATCAAGGGAAAACctgggaaaactggaa
atttgtagaaataatttgaataataagactaataagtgcttgaaataaaa
atatctaaaaaattttttctcgattttggacgtttgtgacccgtttgata
ttcaatgtccgctaattggagagctgaAATaagggttttggccatttcgt
gcgaaaaaatttgtccgctaattagagggtccgctaattgagtgtccgcc
ttttagaaacttttttatgaggatttgactaggaaacggccggggaaaat
caaatcgtccgctaatcagagggtccgctaattgagtgtccgccttttag
aaacttttttatgaggatttgactaggaaacggccggggaaaatcaaatc
gtccgctaatcagaggtgtccgccttttagagtgtccgttaattagaggt
tttactgtatttaTTTCCCCTGTCTAAATACACTCAGAATTAAGTTTCTC
TAGAATGCGAGAAATCTCTTCGTCGTGACTTTAGTCTTGAAAtgtccaaa
atttgaaaaatatcagccaaaattttttctAATGAAGTCCAAACAAAAAG
ACTTTGCTTCAGCCACTCTTGATGATTATGCTAGTcattttgtttcttct
ttttagtaCGGAGGCCAAAAACACGAAGATGTTCTGTTTACAAAGTTGAG
GTGTCAAGCATTGGATGGTATTGAATGCTGTGGAAGTCGGACTTTCCTCC
GTGGGAACGTACCCTGCATTAAGTAAGTAtgagaaaaatctcaaaactta
ataagcagggggttagaataaaaatgtcctgggtgaaacatttttgattt
ttgaaaaggaggctaatacagcagaattaggccaaaagaggaaactttca
aaaacagtttaccaaaaatcaaaagtggggggggggcggttattaggtac
ccgagagtatataTCATGcatttttgatgagctcttttGTCAATAGGTGA
AATCTCATTGGTTCATTAAGtgttagaaattagatgaggcgagattcatt
gtttctgccatcgttgaaagaaaatatttggacttaaaaaaggcctgtaa
acttggcaatccttcatcaaatgacaataTTTTTCGATCAATGCTTTCTT
CAAAGTGCACTTCTTGATGctttcctccaaaattttcAAGTGACGTTTTG
Ttaacaaattgagtctgaaatcgtttgtgcttataaagaacctttcattt
tttggcttaagaaaatatcttttcaaaacaaaatttaacggaCAACGAAA
CTAAACAAAAACTTGTCTCGTGTGGCTAAGTTTTATTTAATATCGTATAT
TAAAAGGGTAGAAATCTTAGATAATGATACAATATTAGTAGAGTTAGAAT
ATTCAGAGCAAACTtaagttctactaaaaagtcgtatttcatcgggcgaa
cttagaatttcttttgatacattttataaaagaaatcaaaagactttgaC
GACCAATTACCAACAAATTCAActcttgtttttctttattattccATGGT
TCAACAAATAATTGTTACATTGTAACTTACAACCATTTTGTTATAATTTG
CAAGTCTTATTTTCAAGAGCTGCCCCATTGACCGGTGTAAAAaggaaatt
tctaattattacGGATTTTTAAATCAGAATTCAAAGCTAGTTTCGTGATA
TTTGgacttcttttgaaaaaatttcatggaaatttaAAGACGATACGGCA
CATCAAGTGTAAAAAAATTGCCGCCGAGAGACAGGGGTTTATTAAATACA
GTATCAACGTGCAAAGAGCACCAATTTTCACATATTTCCGACTTTAATTT
TGCAGGTATTCGGGTCATTATTTTGTAACGACGTTGTTATACTCGATACT
TGTTGGATTCTTCGGCGTGGATCGTTTCTGTCTAGGACATACAGGTACAG
CAGTTGGTAAACTACTGACCATCGGAGGAGCTGGTATTTGGTGGTTTGTT
GATATTATTTTGTTGGTTACTGGAGAGCTACAACCAGCAGACGAGAGTAA
CTGGAACCCCTATTATTAAAAGATGCTTCGATTCATTGTAGATGCACGAT
GGAAGTCTGAATGCTTCATATCCGGAACATTTCTTgcttaaattttgaaa
ctttcaaattGAGGTGCAAGTGgttctgggtacgagattggtGCAACATA
AACGAAATTGTGGATTGACTGTTGAAAAGTTAAAACAGCGTTTAAATTAC
GCACGTATGGGAGGACTGGGTTGGTTGTTGTTTTATTGAAAGCGAAGTAT
TTTTACAGACAAAATCAatacaatttcaaaagtttaaagtcaACTTCAGT
CTGTCCTAAAGAAAAACGGAACGCTATTTCGAGAGAATATTCTCCATAAC
GATACAGTATACAAAGTTTCGCTTTatgtaaaaaatgtgtactgATATTT
TTCATGCTGATATTTAATTCAGTATTAAAATTCGggtgtactttttattt
ttgcgtATCTTTTTATTAATATATAATAGACCCATATTTCTACAAACTGA
CATTCTTTCTAATAAATAACAAGtgacttttatggacctacctggttatg
catttaacacatttataattgatatctacgtgacgtgaacattaaacaat
cattcagaacacaaatagtgacgatctattaaaattagtcgtttgtttct
tatagaa Coding sequence (CDS) from alignment at scaffold_77:311960..323616+ >TCONS_00072366 ID=TCONS_00072366|Name=TCONS_00072366|organism=Clytia hemisphaerica|type=CDS|length=2136bp|location=Sequence derived from alignment at scaffold_77:311960..323616+ (Clytia hemisphaerica)
ATGAAAGAAATTTCTAGATTTTGTTGGTTTATTTTTCTGTGTATCTTTGT
AATATTCACTGTCACTTCTGCTGAAGAAACGTGTGATAATCCGTATTCTC
CATTGGTGAACTGTTCTTTACTgccAGAAGAATTTGTGATTTGTGATAAA
CTACTTGATGTTAATGAATCAACAAGAGAAGCTATAGGTTATGGATGCTA
TAAAtaCGGAGGCCAAAAACACGAAGATGTTCTGTTTACAAAGTTGAGGT
GTCAAGCATTGGATGGTATTGAATGCTGTGGAAGTCGGACTTTCCTCCGT
GGGAACGTACCCTGCATTAAGTATTCGGGTCATTATTTTGTAACGACGTT
GTTATACTCGATACTTGTTGGATTCTTCGGCGTGGATCGTTTCTGTCTAG
GACATACAGGTACAGCAGTTGGTAAACTACTGACCATCGGAGGAGCTGGT
ATTTGGTGGTTTGTTGATATTATTTTGTTGGTTACTGGAGAGCTACAACC
AGCAGACGAGAGTAACTGGAACCCCTATTATTAAATGAAAGAAATTTCTA
GATTTTGTTGGTTTATTTTTCTGTGTATCTTTGTAATATTCACTGTCACT
TCTGCTGAAGAAACGTGTGATAATCCGTATTCTCCATTGGTGAACTGTTC
TTTACTgccAGAAGAATTTGTGATTTGTGATAAACTACTTGATGTTAATG
AATCAACAAGAGAAGCTATAGGTTATGGATGCTATAAAtaCGGAGGCCAA
AAACACGAAGATGTTCTGTTTACAAAGTTGAGGTGTCAAGCATTGGATGG
TATTGAATGCTGTGGAAGTCGGACTTTCCTCCGTGGGAACGTACCCTGCA
TTAAGTATTCGGGTCATTATTTTGTAACGACGTTGTTATACTCGATACTT
GTTGGATTCTTCGGCGTGGATCGTTTCTGTCTAGGACATACAGGTACAGC
AGTTGGTAAACTACTGACCATCGGAGGAGCTGGTATTTGGTGGTTTGTTG
ATATTATTTTGTTGGTTACTGGAGAGCTACAACCAGCAGACGAGAGTAAC
TGGAACCCCTATTATTAAATGAAAGAAATTTCTAGATTTTGTTGGTTTAT
TTTTCTGTGTATCTTTGTAATATTCACTGTCACTTCTGCTGAAGAAACGT
GTGATAATCCGTATTCTCCATTGGTGAACTGTTCTTTACTgccAGAAGAA
TTTGTGATTTGTGATAAACTACTTGATGTTAATGAATCAACAAGAGAAGC
TATAGGTTATGGATGCTATAAAtaCGGAGGCCAAAAACACGAAGATGTTC
TGTTTACAAAGTTGAGGTGTCAAGCATTGGATGGTATTGAATGCTGTGGA
AGTCGGACTTTCCTCCGTGGGAACGTACCCTGCATTAAGTATTCGGGTCA
TTATTTTGTAACGACGTTGTTATACTCGATACTTGTTGGATTCTTCGGCG
TGGATCGTTTCTGTCTAGGACATACAGGTACAGCAGTTGGTAAACTACTG
ACCATCGGAGGAGCTGGTATTTGGTGGTTTGTTGATATTATTTTGTTGGT
TACTGGAGAGCTACAACCAGCAGACGAGAGTAACTGGAACCCCTATTATT
AAATGAAAGAAATTTCTAGATTTTGTTGGTTTATTTTTCTGTGTATCTTT
GTAATATTCACTGTCACTTCTGCTGAAGAAACGTGTGATAATCCGTATTC
TCCATTGGTGAACTGTTCTTTACTgccAGAAGAATTTGTGATTTGTGATA
AACTACTTGATGTTAATGAATCAACAAGAGAAGCTATAGGTTATGGATGC
TATAAAtaCGGAGGCCAAAAACACGAAGATGTTCTGTTTACAAAGTTGAG
GTGTCAAGCATTGGATGGTATTGAATGCTGTGGAAGTCGGACTTTCCTCC
GTGGGAACGTACCCTGCATTAAGTATTCGGGTCATTATTTTGTAACGACG
TTGTTATACTCGATACTTGTTGGATTCTTCGGCGTGGATCGTTTCTGTCT
AGGACATACAGGTACAGCAGTTGGTAAACTACTGACCATCGGAGGAGCTG
GTATTTGGTGGTTTGTTGATATTATTTTGTTGGTTACTGGAGAGCTACAA
CCAGCAGACGAGAGTAACTGGAACCCCTATTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072366-exon-scaffold_77-1491911889:311960..312480 | TCONS_00072366-exon-scaffold_77-1491911889:311960..312480 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1510915933:311960..312480 | TCONS_00072366-exon-scaffold_77-1510915933:311960..312480 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1575043694:311960..312480 | TCONS_00072366-exon-scaffold_77-1575043694:311960..312480 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1491911889:316061..316142 | TCONS_00072366-exon-scaffold_77-1491911889:316061..316142 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1510915933:316061..316142 | TCONS_00072366-exon-scaffold_77-1510915933:316061..316142 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1575043694:316061..316142 | TCONS_00072366-exon-scaffold_77-1575043694:316061..316142 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1491911889:321566..321681 | TCONS_00072366-exon-scaffold_77-1491911889:321566..321681 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1510915933:321566..321681 | TCONS_00072366-exon-scaffold_77-1510915933:321566..321681 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1575043694:321566..321681 | TCONS_00072366-exon-scaffold_77-1575043694:321566..321681 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1491911889:322765..323616 | TCONS_00072366-exon-scaffold_77-1491911889:322765..323616 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1510915933:322765..323616 | TCONS_00072366-exon-scaffold_77-1510915933:322765..323616 | Clytia hemisphaerica | exon |
| TCONS_00072366-exon-scaffold_77-1575043694:322765..323616 | TCONS_00072366-exon-scaffold_77-1575043694:322765..323616 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:311960..323616 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007829 | TM2 |
Blast
BLAST of TCONS_00072366 vs. Swiss-Prot (Human)
Match: TM2D2 (TM2 domain-containing protein 2 OS=Homo sapiens GN=TM2D2 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.317e-53 Identity = 94/150 (62.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 487 NPYSPLVNCSLLPEEFVICDKLLDV--NESTREAIGYGCYKYGGQKHEDVLFTKLRCQALDGIECCGSRTFLRGNVPCIKYSGHYFVTTLLYSILVGFFGVDRFCLGHTGTAVGKLLTIGGAGIWWFVDIILLVTGELQPADESNWNPYY 930
+P+SP++ CS LP+EF+ C+ +D N + + +GYGC K+GGQ + DV T ++C ALDGIEC RTFLR N PCIKY+GHYF+TTLLYS +G FGVDRFCLGHTGTAVGKLLT+GG GIWWFVD+ILL+TG L P+D SNW Y
Sbjct: 65 DPHSPVILCSYLPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY 214
The following BLAST results are available for this feature:
|
