TCONS_00072366-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00072366-protein
Unique NameTCONS_00072366-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00072366-protein ID=TCONS_00072366-protein|Name=TCONS_00072366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=177bp
MKEISRFCWFIFLCIFVIFTVTSAEETCDNPYSPLVNCSLLPEEFVICDK
LLDVNESTREAIGYGCYKYGGQKHEDVLFTKLRCQALDGIECCGSRTFLR
GNVPCIKYSGHYFVTTLLYSILVGFFGVDRFCLGHTGTAVGKLLTIGGAG
IWWFVDIILLVTGELQPADESNWNPYY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044936XLOC_044936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00072366TCONS_00072366Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007829TM2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007829TM2 domainPFAMPF05154TM2coord: 111..158
e-value: 1.4E-13
score: 50.8

Blast
[Close]
BLAST of TCONS_00072366-protein vs. Swiss-Prot (Human)
Match: TM2D2 (TM2 domain-containing protein 2 OS=Homo sapiens GN=TM2D2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-58
Identity = 93/146 (63.70%), Postives = 115/146 (78.77%), Query Frame = 0 
Query:   30 NPYSPLVNCSLLPEEFVICDKLLDV--NESTREAIGYGCYKYGGQKHEDVLFTKLRCQALDGIECCGSRTFLRGNVPCIKYSGHYFVTTLLYSILVGFFGVDRFCLGHTGTAVGKLLTIGGAGIWWFVDIILLVTGELQPADESNW 173
            +P+SP++ CS LP+EF+ C+  +D   N +  + +GYGC K+GGQ + DV  T ++C ALDGIEC   RTFLR N PCIKY+GHYF+TTLLYS  +G FGVDRFCLGHTGTAVGKLLT+GG GIWWFVD+ILL+TG L P+D SNW
Sbjct:   65 DPHSPVILCSYLPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNW 210
The following BLAST results are available for this feature:
BLAST of TCONS_00072366-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM2D21.588e-5863.70TM2 domain-containing protein 2 OS=Homo sapiens GN... [more]
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