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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071835 ID=TCONS_00071835|Name=TCONS_00071835|organism=Clytia hemisphaerica|type=transcript|length=2745bp
aatggcccttcctagaatttttaaagacatttactttcgcgaaaagggcc
aaaattcgcgaaaatcgcaaaagtttctgctcgcgaaagtttctacgcct
aaagtacattggtaaaaaattgctctttattcttaaaaattgaactagta
attgacgaaaaaggaaaaacaaactttcatttttatcgtcaaatcatgta
gaaaccgtccgatttgtatggcgacccgtcttttctggacttttatttaa
tgacctaatcaacgtttttacaatagaattttcaataaaagtgatcgttg
aactttgaacAGCTGTTTTTCCATGTCTTAACATTCCTCTGCTGTATacg
actgattttacaaaaaccgTACCAAAGACGAATAAAACCGTACCCAAAGA
CGAATAAAACCCTAttcttcaagattttttttgtggaagttgagagaaat
tgaattttctGGCACTATGCATTTTTTTGTGAAGAAGGGTACTCTTTTTT
TCCCTAAAATCCAATTGACATGACCCAATTTCGCAGCAAATCAaggcaaa
atatttcaaagctaTAAAAAATGTTCTGTTTATGgaactaaaagaaaaag
agttcTGTAGCAGTCATTTGGGAGAATGTGACAACACAGCTGTTACCtag
gtaaaataaaatttatttcccAACAactaacagttagtcacactaacaac
atcagtcatctacaggatacatttcaacaacaaagatgagagttacctga
atcaagttcgcaagacaatattaattaaaacttgaaagttggaaacaaaa
taaaacgtgcagcatccaaaatcaaccaaccaaaatttgtcattcaattc
ccgagacagcgcttcgatttttaaggccttgtttatacgctaaagttaaa
acaattacgcacatgtaaatgggttattgtttgaggtccggcaaaatttc
cgggagatagcctatccggcagtgcgcgggacgctagtgtggctaactga
cTAAAATCAACAAAgttcaaagatttttaaacaactgcagttttaaaatt
attattcttaaattttatcaCATTCACTTTGTTTGGACAAGCATTTCTTA
ATAAAGCCTTGTAAAAATTGAAAGTTATTACAAAAAATCTACaggaaaaa
tattcttaaagtcCTTCTTGTAGTTTATATCCAGGGCCTTTTGGTGGCTC
AGTTAATGAGGTTAAACCTCCAGCTGGCTCACTTGTGAATCTTCCATTCC
TTGGTCCTGGTGCTGGTGTTCTTCCAGCAGCCAGATCATCAAGAATTTCC
TCAATGTCACTTGGTTTCAAGTCCTCGTAATAAAGATCATTAATTTGAAC
CATGGGGGCATTTACACAAGCTCCCAAACATTCTACTTCTGAAAGGGTGA
ATAATTTATCTTTGGTTGTTTCACCAACACCAATCTTCAATTTCTTCTGG
ATAGCTTCCATGATCGAATCAGAATCACAAAGCATGCATGGAGTTGTTGT
ACATATTTGGACATGGTATTTTCCAACAGGTTCTCTATTGAACATTGTGT
AGAATGTTGCAACTTCATAAACCCTCATTTCTGGCATATTCAGCATCTTA
GCAACAAAGTTCATACCTGAGAGTGGTACCCATCCAATTTGGCGCTGTAC
CAAATCAAGAAGTGGAATTGTAGCTGCTGCTTCATGACCTTTGGGATAGT
TAGAAATAATCACTTCAGCACGTTTCTTGTTAGCTTCAGTGAAGTCAAAT
GGGGTGTCAGGGTTGTTGTAGTCGGTATCTCTGTGAACGAATAGTTTATC
CGAGGCTACAGGTGCAGATATgaacaaatttctttttggaattttggaaa
tttcagcaaaaactCTCCTCACCACTTGACTCGCCATCTTGGACTTTGTT
TATGTTTCATAAATTGACTTGGTTAAACATCCACACGCCTCTTTTAGACT
ATTCGAATCTAATAACTTTTAGTAAGTGTGACCGTGCCAGCGATATTGAT
AAGGGCCTGTCTTCATCGAATAGAAATTGTTTATTCGTTCGATGTATACA
gagttttaataatttttttcagcgcgaaaattttcaaaaagcgtGGCCTG
CAAGAATTTCAATCGCACCACACAGCCAACAGCACAGCAGCACATATCTG
TCTGGTTTCAGTTCATTTCGGTCAGTTTCATTAATCATGGCAGAAAACAA
TGTCAATCAGgCAAAGACCAAGGTTGCAGATAAAGAGCAAAgTTCTCAAT
CATCAAGTGGCGAGCAAAATCAACAATCAGAGATGAACTTTCAGAATGTC
ACTGAAGCATGCCAagGAATCAAGCAAGAGTTTGcttattcattttcaaa
atgggCGGCAGCCTTTCAAGAAAGTGAAAAGATCGACATGTTTTTCGAGA
AAAGGTTGGATGAGCTTATTCAAGAAGCAGAAAAAGCCGAAGACATTTTG
AAATCACAGAAGGCAGCTTTAAAAGAGAAATTAAGATGTTTGACAAAGAC
ATTAAATCAAGTTgtagaaaatgaaagttaaaataaatataatgcAGAAT
CTTTAGTCAAATTTTGTTCTTAATAAAATAGAGTTCGATCCCAGGGAAGG
GGTGCTCGATTTAAAAAGTTTAGATTCTAAAGTCCCCTTGGTCGGTCCCT
TACCTTGATAGTACCCTTATAGAATATTTTAAATGAAATCTTAGCTCAAA
GTATTTGTTTATTTATCATATATAGTTTTATGTGTTTGTTATTTG Run BLAST on NCBI transcript from alignment at scaffold_64:869..10784+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071835 ID=TCONS_00071835|Name=TCONS_00071835|organism=Clytia hemisphaerica|type=transcript|length=9916bp|location=Sequence derived from alignment at scaffold_64:869..10784+ (Clytia hemisphaerica)
aatggcccttcctagaatttttaaagacatttactttcgcgaaaagggcc
aaaattcgcgaaaatcgcaaaagtttctgctcgcgaaagtttctacgcct
aaagtacattggtaaaaaattgctctttattcttaaaaattgaactagta
attgacgaaaaaggaaaaacaaactttcatttttatcgtcaaatcatgta
gaaaccgtccgatttgtatggcgacccgtcttttctggacttttatttaa
tgacctaatcaacgtttttacaatagaattttcaataaaagtgatcgttg
aactttgaacAGCTGTTTTTCCATGTCTTAACATTCCTCTGCTGTATacg
actgattttacaaaaaccgTACCAAAGACGAATAAAACCGTACCCAAAGA
CGAATAAAACCCTAttcttcaagattttttttgtggaagttgagagaaat
tgaattttctGGCACTATGCATTTTTTTGTGAAGAAGGGTACTCTTTTTT
TCCCTAAAATCCAATTGACATGACCCAATTTCGCAGCAAATCAaggcaaa
atatttcaaagctaTAAAAAATGTTCTGTTTATGgaactaaaagaaaaag
agttcTGTAGCAGTCATTTGGGAGAATGTGACAACACAGCTGTTACCtag
gtaaaataaaatttatttcccAACAactaacagttagtcacactaacaac
atcagtcatctacaggatacatttcaacaacaaagatgagagttacctga
atcaagttcgcaagacaatattaattaaaacttgaaagttggaaacaaaa
taaaacgtgcagcatccaaaatcaaccaaccaaaatttgtcattcaattc
ccgagacagcgcttcgatttttaaggccttgtttatacgctaaagttaaa
acaattacgcacatgtaaatgggttattgtttgaggtccggcaaaatttc
cgggagatagcctatccggcagtgcgcgggacgctagtgtggctaactga
cTAAAATCAACAAAgttcaaagatttttaaacaactgcagttttaaaatt
attattcttaaattttatcaCATTCACTTTGTTTGGACAAGCATTTCTTA
ATAAAGCCTTGTAAAAATTGAAAGTTATTACAAAAAATCTACaggaaaaa
tattcttaaagtcCTTCTTGTAGTTTATATCCAGGGCCTTTTGGTGGCTC
AGTTAATGAGGTTAAACCTCCAGCTGGCTCACTTGTGAATCTTCCATTCC
TTGGTCCTGGTGCTGGTGTTCTTCCAGCAGCCAGATCATCAAGAATTTCC
TCAATGTCACTTGGTTTCAAGTCCTCGTAATAAAGATCATTAATTTGAAC
CATGGGGGCATTTACACAAGCTCCCAAACATTCTACTTCTGAAAGGGTGA
ATAATTTATCTTTGGTTGTTTCACCAACACCAATCTTCAATTTCTTCTGG
ATAGCTTCCATGATCGAATCAGAATCACAAAGCATGCATGGAGTTGTTGT
ACATATTTGGACATGGTATTTTCCAACAGGTTCTCTATTGAACATTGTGT
AGAATGTTGCAACTTCATAAACCCTCATTTCTGGCATATTCAGCATCTTA
GCAACAAAGTTCATACCTGAGAGTGGTACCCATCCAATTTGGCGCTGTAC
CAAATCAAGAAGTGGAATTGTAGCTGCTGCTTCATGACCTTTGGGATAGT
TAGAAATAATCACTTCAGCACGTTTCTTGTTAGCTTCAGTGAAGTCAAAT
GGGGTGTCAGGGTTGTTGTAGTCGGTATCTCTGTGAACGAATAGTTTATC
CGAGGCTACAGGTGCAGATATgaacaaatttctttttggaattttggaaa
tttcagcaaaaactCTCCTCACCACTTGACTCGCCATCTTGGACTTTGTT
TATGTTTCATAAATTGACTTGGTTAAACATCCACACGCCTCTTTTAGACT
ATTCGAATCTAATAACTTTTAGTAAGTGTGACCGTGCCAGCGATATTGAT
AAGGGCCTGTCTTCATCGAATAGAAATTGTTTATTCGTTCGATGTATACA
gagttttaataatttttttcagcgcgaaaattttcaaaaagcgtGGCCTG
CAAGAATTTCAATCGCACCACACAGCCAACAGCACAGCAGCACATATCTG
TCTGGTTTCAGTTCATTTCGGTCAGTTTCATTAATCATGGCAGAAAACAA
TGTCAATCAGgtagaaaattaatttttcaaggAAAGTACCCTCTTAATCA
TCGTCAAGTTAACCAGCAGTAGGATAATCATCTGAAAtcatttattaaaa
tatataaaacacTGTGTCAATCATCAATGTCCAGAATGTCAGAAATGTAT
CCATCATTTCCACCACAAGCAAGCAAAATAAATACCGTCAAGAATCATTA
ATTCAGTCTAATACAAGCTACAATCATGGTAGAAacatattgagattttg
gtgTATTTTAgcgttttcagaatttaaaagtTTGGGCGAGAGAATAGTTT
GTTTGGGAGAACGCAACGACATATTGACTCAGTCATtagtaaaaaacttt
tgaaagggGGAGGGTTGCGACCCTTCTAAAGAGTGATTTTTTATGCTTAA
TTAACATCCTGCTATAACCTGTGTAAAGTTAACATTTTCAATAGCATCAT
GGCGTATTCTTTGTTTTAAAGTGTACATAGTAGGAGTAAATCTGGCGCCA
GCTACTCTGAGCCAATGCGCCAAGACCAATCTCGAGTCTGCGCCGGAGAT
ATCCAAAGcaaccaaagcagcaaaatttcaaaacaaatgtttctgCTCGC
AGTCTAatctaccattttagaatctcatATTTGCACACTAGCGAGTAGTT
TTGGCGAATTAGTCCTGGACAGAATCACGTGTAAATAAAACAGCGTGCTt
ggataataaaaaatcatgcgCGAGTATAAATTTTAAGATGGCGGGNtaat
tataaaatttatttataagatgctttgttgtctttttttttctttgtgta
aacttgcatatgttttgcatacacgttgtcgtttttttttaataaggaac
cttaactttgctctgagcctggagttccttatttttccagagcatttcag
cctcaaagttccttatcgagttccttatttacatagctgctcagtttgga
taaccatctcttactgttccttaaaacttgttttcttattctcagcctga
gcagttcctaaacaattccttattttttgaaccattttcagccttgagtt
ccttataaacgtgttccttataaaaaaaaacatgtactttccaactaaat
ccaaccacggctttttcgttcctctatttttgcttATAATTCAAGATggt
ggatggaaaggcgaaaaggtctattcagaTGTTTCTTGATGGCNctctat
ttttgcatattaTTCAAGATGGTGGATGGAAAggggaaaaggtctattca
gaTGTTTCTTGATGGCCAATTGACATCTAGCTAATCTCAAATTTTAATAA
TGATATTAAACATAACTATACATGACATCACTTATGATTAGGAGATATAC
ATTTTACAATCTTTTGATAATATTTAATTTCCTGCTTGTTATACTTGCAT
CCACCAaagtgtggagtaattagttatgtAAAAGACTGTTGCCTTCGCTA
AAAGGAgtattgctattttagcacttcaactttctttcattgaattgaat
atttcaatttggaggGGATTGATGGCtcctaggctatattccaagcctta
ttggagcaaatttgagctttaaaATCCTGACATCCTAAGAGAcaccgtcc
tgatatgaaatcaaatatgtcaataagaatgtcctgggttgaaaattttc
tgaaaaattaattagcaagAGAGACTCTTTTTAGGTACCCAAGATTGATT
TGGCATTACAccattgcaaaatatttttcatggaaattaaCCTTTTCTAA
TGCTAATGTAATCTaaataggaaacaaatattgaATTCTATTCTCTTTTG
CTCatacattttaaatttcaagataagAACAgctattaataaaataaatg
taaattgatattgacatatttaatgatgtcataatcaatgcatACTCCAC
CTCCAGAGCACAGAAGgttcttattttattttcaatttttcacacagACT
CAACATATTCTCACTTTTAAATCTCTTGGCCTTGGGATTTCTCCAAAAGC
CGATTAAAATAAGATATTTTTACATACTCCACAAAATActtcatttacaa
aatatcCTCATTGATGTAACTCTGAAACATATTATATTCAACAAACTTCG
AAaccttaaaatttttaaaatttacataatttcgaACACTTTGAGGGGTC
CATCAATTTCATCCActgatattttacaaattacatAGCTGTTTTAAGAT
AACGATCGCAAATGTCATAATCAATTTTGTCAGTGCTGTAAATTTTTAAC
AAtctccttttcattggataaatgccatcaaaatatacaaaattgGATGA
TTACACATAGATTTACCCCTGCAAATACAGCTTAGATTCTTATTCATTAT
GTCTATAAATTGAAGCTGGTAAAGACAATTGCATGGGTTAGgcgaaccct
aaaaatatttttgtttccggtccaccgggtgacgaaaaaaccactcaccc
ggccggccgcaaaaaatttttttttgctaaatttcgatcccaaaactcga
ttttttaaagcactcgtaGAAGTTAAAATGATGGTCTTCTTNTCTTTCAT
TgaattgaatatttcaatttggaggGGATTGATGGCtcctaggctatatt
ccaagtcttattggagcaaatttgagctttaaaATCCTGATATCCTAAGA
GAATCAAATATGtcaataagaatgtcctgggtggaaaattttctgaaaaa
ttaattGGCAAGGGAGACTCTTTTTAGGTACCCAAGATTGATTTGGCATA
ACAccattgcaaaatatttttcatgacaGTTAACTTTTTCTAATGCTAAt
gtaatctagataggaaacaaatattgaATTCTATTCTCTTTTGCTCatac
attttaaatttcaagataagAACAgctattaataaaataaatgtGAATTG
ATATTGagatatttaatgatgtcataatcaatgcatACTCCACCTCCAGA
GCACAGGAGGttcttatttcattttcaatttttcacacagACTCAACATA
TTCTCACTTTTAAATCTCTTGGCCTTGGGATTTCTCCAAAAGCCGATTAA
AATAAGATATTTTTACATACTCCACAAAATActtcatttacaaaatatcC
TCATTGATGTAACTCTGAAACATATTATATTCAACAAACCTCGAAacctt
aaattttttaaaactttacatAATTTCGAACACTTTGAGGGGTCCATCAA
TTTCATCCactgatatttttaaattacaTAGCTGTTTTAGGATAACGATC
GCAAATGTCCCGAAATATCACACCAACGTTATCCTACCGGGAGTAATCCT
GGTTGGATACTGATTTGatattttataatatttataaattattgccctta
atgaatgtgaattgaTATTGAcatatatttaatgatgtcataatcaattt
TGTCAGTGCTGTAAATTTTTAACAAtctccttttcattggataaatgcca
tcaaaatatacaaaattgGATGATAACACATAGATTTATCCCTGCAAGTA
CAGCTTAGATTCTTATTCATTATGTCTATGAATTGAAGCTGGTAAAGACA
ATTGCATGGGTTACTGGCGATTAATGGGTTTTTTAAGCTATCTTCAGTTA
TAATAAAAGGTAGAAATAACTGAACATGGAAAGGGTTCAATTTTATGTTT
AGATTTCCATTTCCATTTATATTGGATCCCCTTGCATGGTTTATAGACCA
TTCAATGACCCAAATAGCTCAAAATATTCTATTGTTTCTTGCTATAGATG
gccacattttttcttttttcacacTTTCCTTTCATGAAAAGTTGGACCCC
ATTCAGTAGGGTAGGCTCTAATCCCATACAGACCCAAGGATATTCCATCT
CACCTGAGTGGGTTAGGCCTTAGCCCCACTCCATTTGAAAACTCCTTAAG
TGGGATTTCGGCAAGTTTGGCTGGTTCGGTTCTCATATGAACAGAATCCT
TTTTTCATGCAAAATAGTATAAAGGAGAGATGAATCTCAAATGAGATCCC
AGTCTGTTGGCCTGCTTCCATGTTAATGGCCCCTTTATTTCAATATCCTT
ATCTTGGCCTTTATTGATTATTTAATTGTTGGTTCATTTCAGttgatatg
attattttttaggCAAAGACCAAGGTTGCAGATAAAGAGCAAAGTAAGAG
CTTAACTTTAGTTGAGTAAGAAAATAGGGCTAGATTTGTAtgctcttttt
ataagaataacctTTATAGAAATATTATGGTTAGTTTTTTGAGTTAAAAC
TTTTGAGTTTAGAACACTAGAGAAAAAGAATCTTCCTCAGACTAACTATT
CCAGACTCTATTCTCATGAAAAGcaggtatttttttctttaagtttTTAT
CTTATGATCAAGATTATTACTAatgtctgtccagatataattggcagtgg
aaacaagaatgcctgtaacttttgatagtcaaatataatatagtttcgaa
ataataaatgataccaatagcaataataccaatgcaccaacacttaacat
tttccaacgtTTAATTGCAcagttcaaaaaagataacatgacccccgttt
ttagtaataagttggagatttgatatttcacagaaaaatgctaccaaggg
gtatttcgggtcccatatcttctgaaggacttttttgtttgccttgaaat
ttaacaaacttcttaacctaaggttgaactaccactggtttaaaaatgaa
cgttatagcataactagaaaaaaagctcaatttttgcaatcgcaaattta
accgctaaaaatcgcgaatttttcaaccaaaaatacattcaaatacagCA
CCTTTGACTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctctaaaacaagca
aaaaaaatttccataattatatttgactatcaaaagttacaggcattctt
gtttccactgccaattatatctggacagactttaggagaaattatttttt
ttccaaaaaaaatattttttttaaatactcccATGTCTTAATTGCATATC
GAATAAATCCAGATTAATCCATTCATATgttctgaaaaattgaaatttat
cttGGATTACTTGTTACTTTATGGTATGAATTCCCaagttaaaaaaatgg
aaaataactcggaaagctaaaggaagcaaaaattcccgagttacaaattc
aaaaataacttggaaagctaaaggaagaaagAATTCcagagttaaaaaat
gaaaaataactttgaaagttaaaggaagcaaaataaaccgagttatgaaa
tgtaaaatgacgtcactgaattccaaaaatgacgtcataactcgggataa
cttgGTTTTTTcgtaattcggtttttttaactcggaaaaaataactcggg
aattccgggcctctgACTTTATAACCTTAGAACTTCATTCTAGAACTACT
AATAAgcagtttttttattattaggTTCTCAATCATCAAGTGGCGAGCAA
AATCAACAATCAGAGATGAACTTTCAGAATGTCACTGAAGCATGCCAagg
ttatttttgaaatttatttgaaacaTGTCAGAAGCTTTTTTCAGTATAAT
GAAAAGGGAATTTCGGCGTGGAATTCTGGGCAAGGGAGCCAGTGTGAGAT
ATATAAATAGCCGTATCAAAAGCGCAAATTGGGCTAacttgttttttctg
attttattaTAACCTTGCTTTAAAATGGAGGGGGttaatctaaagaatcc
tacatctactaaaaatagacaaaaagaaggacaaatttcataaaaaatga
catattgcgcatccacaaccccgacccgGTTAGTTTGTCCATGTTTATCA
CAGGATTTAACTACATATGGCTAAAAGAAAGagaaattacgcatgcgtgt
tataaTGCAGGATtttttagaggaacagactgaaATTGAGGCGAATATAT
TGAATTTTTAGTATTTGTTGATTTATGATGTAATCATTTTTATTGCATCT
TTAGGAATCAAGCAAGAGTTTGcttattcattttcaaaatgggCGGCAGC
CTTTCAGTAAGTGAATTTAAActacaaaaatcaatttaaaatgaaacata
aaaagggactaatATTAAAATTTGACCGTTCACAAAGACATTCCCATAGA
CTTTTTTACGTTTTACTTACTTTGagggaattaattttggcgagcatgaa
aatcctaaaaaattttgaTCTCAACAATAACGAATTTTTTtaagtacttt
aatgggataaattttcgcgggaattaattttcgcggatttcccGGATTTc
ccggatttgggtgtcatccgcgaaaataagtcccattggaaatttgaaaa
aggcccatccgcgaaaattagtttcagcaaaaaattagtttcagcgaaaa
atttgaattttttttgcaatccgcgaaatttctatttttatcgtttttta
ttttttttctacatgagggcacgcaaccctcgaaaaaggtcaaATCCTCG
ATATGCTtgttagcaaaaaatcgttttcctcaaaattttcttcacaaatt
tagAAACTTGGAAAAggtattggaaaattttttatctaaagtgatcgctt
attaaaagcttttcaatgcaagagggtaatccaactggcttgaaatttaa
catttaaaatgatatgtaagaaaaggagggaaaacggaaaacaaaattct
taatttcctggaaaaaatttatttcaatgttttgacccttttcaaaaatt
ttaatttgtaccccaatccgcgaaattaaatccccgcgaaaaatcaggaa
atccctcatccgcgaaaattaatccccgcgaaatcttaaaattttgcgga
tgagctcaaccgcgaaatttaatcaccGCAAagatttatcccattaaagt
agtctAAAGGTACACTATTTCCATTTTACTAAGTGTGTAAGGTTCTGGGT
TGATTCTCAAATTAGGTCTAACCTATTTAAAAAATAGTACTTTTTACCTC
TGCTTAATGTTTGTCGATTTAAAGCGTAAACAATGGTCAGCTAAACCAAA
GAGAATCTCTCTACTGTGGTAATTgttctaagaatattttaatatCAGAA
AATCATACAATGTTTTGATATCCTATTATATCCTATGAGATGGTGCCTCT
CTGCCTAATGTTTATCAGTTGAAGCATAGACTGAACTGAACTGACAACTA
GAGCCAAAGGGAGAAAAACTGTTATAAGAATACTATAAGGAGTTTTATTT
GAATCATAAAATCTTGAAGTCCTACTTTTGTGTTTTTAGAGAAAGTGAAA
AGATCGACATGTTTTTCGAGAAAAGGTTGGATGAGCTTATTCAAGAAGCA
GAAAAAGCCGAAGACATTTTGAAATCACAGAAGGCAGCTTTAAAAGAGAA
ATTAAGATGTTTGACAAAGACATTAAATCAAGTTgtagaaaatgaaagtt
aaaataaatataatgcAGAATCTTTAGTCAAATTTTGTTCTTAATAAAAT
AGAGTTCGATCCCAGGGAAGGGGTGCTCGATTTAAAAAGTTTAGATTCTA
AAGTCCCCTTGGTCGGTCCCTTACCTTGATAGTACCCTTATAGAATATTT
TAAATGAAATCTTAGCTCAAAGTATTTGTTTATTTATCATATATAGTTTT
ATGTGTTTGTTATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00071835-exon-scaffold_64-1491911889:869..3078 | TCONS_00071835-exon-scaffold_64-1491911889:869..3078 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1510915933:869..3078 | TCONS_00071835-exon-scaffold_64-1510915933:869..3078 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1575043694:869..3078 | TCONS_00071835-exon-scaffold_64-1575043694:869..3078 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1491911889:7181..7211 | TCONS_00071835-exon-scaffold_64-1491911889:7181..7211 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1510915933:7181..7211 | TCONS_00071835-exon-scaffold_64-1510915933:7181..7211 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1575043694:7181..7211 | TCONS_00071835-exon-scaffold_64-1575043694:7181..7211 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1491911889:8593..8667 | TCONS_00071835-exon-scaffold_64-1491911889:8593..8667 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1510915933:8593..8667 | TCONS_00071835-exon-scaffold_64-1510915933:8593..8667 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1575043694:8593..8667 | TCONS_00071835-exon-scaffold_64-1575043694:8593..8667 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1491911889:9123..9174 | TCONS_00071835-exon-scaffold_64-1491911889:9123..9174 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1510915933:9123..9174 | TCONS_00071835-exon-scaffold_64-1510915933:9123..9174 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1575043694:9123..9174 | TCONS_00071835-exon-scaffold_64-1575043694:9123..9174 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1491911889:10408..10784 | TCONS_00071835-exon-scaffold_64-1491911889:10408..10784 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1510915933:10408..10784 | TCONS_00071835-exon-scaffold_64-1510915933:10408..10784 | Clytia hemisphaerica | exon |
| TCONS_00071835-exon-scaffold_64-1575043694:10408..10784 | TCONS_00071835-exon-scaffold_64-1575043694:10408..10784 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_64 | supercontig | scaffold_64:869..10784 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
Blast
BLAST of TCONS_00071835 vs. Swiss-Prot (Human)
Match: NDUV2 (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Homo sapiens GN=NDUFV2 PE=1 SV=2) HSP 1 Score: 342.043 bits (876), Expect = 7.367e-110 Identity = 160/216 (74.07%), Postives = 183/216 (84.72%), Query Frame = -1
Query: 1159 ASDKLFVHRDTDYNNPDTPFDFTEANKKRAEVIISNYPKGHEAAATIPLLDLVQRQIGWVPLSGMNFVAKMLNMPEMRVYEVATFYTMFNREPVGKYHVQICTTTPCMLCDSDSIMEAIQKKLKIGVGETTKDKLFTLSEVECLGACVNAPMVQINDLYYEDLKPSDIEEILDDLAAGRTPAPGPRNGRFTSEPAGGLTSLTEPPKGPGYKLQEGL 1806
A LFVHRDT NNPDTPFDFT N KR E I+ NYP+GH+AAA +P+LDL QRQ GW+P+S MN VA++L +P MRVYEVATFYTM+NR+PVGKYH+Q+CTTTPCML +SDSI+EAIQKKL I VGETT DKLFTL EVECLGACVNAPMVQIND YYEDL DIEEI+D+L AG+ P PGPR+GRF+ EPAGGLTSLTEPPKGPG+ +Q GL
Sbjct: 34 AGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGVQAGL 249
The following BLAST results are available for this feature:
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