XLOC_044603 (gene) - C. hemisphaerica

Overview
NameXLOC_044603
Unique NameXLOC_044603
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_64:869..10784+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044603 ID=XLOC_044603|Name=XLOC_044603|organism=Clytia hemisphaerica|type=gene|length=9916bp|location=Sequence derived from alignment at scaffold_64:869..10784+ (Clytia hemisphaerica)
aatggcccttcctagaatttttaaagacatttactttcgcgaaaagggcc aaaattcgcgaaaatcgcaaaagtttctgctcgcgaaagtttctacgcct aaagtacattggtaaaaaattgctctttattcttaaaaattgaactagta attgacgaaaaaggaaaaacaaactttcatttttatcgtcaaatcatgta gaaaccgtccgatttgtatggcgacccgtcttttctggacttttatttaa tgacctaatcaacgtttttacaatagaattttcaataaaagtgatcgttg aactttgaacAGCTGTTTTTCCATGTCTTAACATTCCTCTGCTGTATacg actgattttacaaaaaccgTACCAAAGACGAATAAAACCGTACCCAAAGA CGAATAAAACCCTAttcttcaagattttttttgtggaagttgagagaaat tgaattttctGGCACTATGCATTTTTTTGTGAAGAAGGGTACTCTTTTTT TCCCTAAAATCCAATTGACATGACCCAATTTCGCAGCAAATCAaggcaaa atatttcaaagctaTAAAAAATGTTCTGTTTATGgaactaaaagaaaaag agttcTGTAGCAGTCATTTGGGAGAATGTGACAACACAGCTGTTACCtag gtaaaataaaatttatttcccAACAactaacagttagtcacactaacaac atcagtcatctacaggatacatttcaacaacaaagatgagagttacctga atcaagttcgcaagacaatattaattaaaacttgaaagttggaaacaaaa taaaacgtgcagcatccaaaatcaaccaaccaaaatttgtcattcaattc ccgagacagcgcttcgatttttaaggccttgtttatacgctaaagttaaa acaattacgcacatgtaaatgggttattgtttgaggtccggcaaaatttc cgggagatagcctatccggcagtgcgcgggacgctagtgtggctaactga cTAAAATCAACAAAgttcaaagatttttaaacaactgcagttttaaaatt attattcttaaattttatcaCATTCACTTTGTTTGGACAAGCATTTCTTA ATAAAGCCTTGTAAAAATTGAAAGTTATTACAAAAAATCTACaggaaaaa tattcttaaagtcCTTCTTGTAGTTTATATCCAGGGCCTTTTGGTGGCTC AGTTAATGAGGTTAAACCTCCAGCTGGCTCACTTGTGAATCTTCCATTCC TTGGTCCTGGTGCTGGTGTTCTTCCAGCAGCCAGATCATCAAGAATTTCC TCAATGTCACTTGGTTTCAAGTCCTCGTAATAAAGATCATTAATTTGAAC CATGGGGGCATTTACACAAGCTCCCAAACATTCTACTTCTGAAAGGGTGA ATAATTTATCTTTGGTTGTTTCACCAACACCAATCTTCAATTTCTTCTGG ATAGCTTCCATGATCGAATCAGAATCACAAAGCATGCATGGAGTTGTTGT ACATATTTGGACATGGTATTTTCCAACAGGTTCTCTATTGAACATTGTGT AGAATGTTGCAACTTCATAAACCCTCATTTCTGGCATATTCAGCATCTTA GCAACAAAGTTCATACCTGAGAGTGGTACCCATCCAATTTGGCGCTGTAC CAAATCAAGAAGTGGAATTGTAGCTGCTGCTTCATGACCTTTGGGATAGT TAGAAATAATCACTTCAGCACGTTTCTTGTTAGCTTCAGTGAAGTCAAAT GGGGTGTCAGGGTTGTTGTAGTCGGTATCTCTGTGAACGAATAGTTTATC CGAGGCTACAGGTGCAGATATgaacaaatttctttttggaattttggaaa tttcagcaaaaactCTCCTCACCACTTGACTCGCCATCTTGGACTTTGTT TATGTTTCATAAATTGACTTGGTTAAACATCCACACGCCTCTTTTAGACT ATTCGAATCTAATAACTTTTAGTAAGTGTGACCGTGCCAGCGATATTGAT AAGGGCCTGTCTTCATCGAATAGAAATTGTTTATTCGTTCGATGTATACA gagttttaataatttttttcagcgcgaaaattttcaaaaagcgtGGCCTG CAAGAATTTCAATCGCACCACACAGCCAACAGCACAGCAGCACATATCTG TCTGGTTTCAGTTCATTTCGGTCAGTTTCATTAATCATGGCAGAAAACAA TGTCAATCAGgtagaaaattaatttttcaaggAAAGTACCCTCTTAATCA TCGTCAAGTTAACCAGCAGTAGGATAATCATCTGAAAtcatttattaaaa tatataaaacacTGTGTCAATCATCAATGTCCAGAATGTCAGAAATGTAT CCATCATTTCCACCACAAGCAAGCAAAATAAATACCGTCAAGAATCATTA ATTCAGTCTAATACAAGCTACAATCATGGTAGAAacatattgagattttg gtgTATTTTAgcgttttcagaatttaaaagtTTGGGCGAGAGAATAGTTT GTTTGGGAGAACGCAACGACATATTGACTCAGTCATtagtaaaaaacttt tgaaagggGGAGGGTTGCGACCCTTCTAAAGAGTGATTTTTTATGCTTAA TTAACATCCTGCTATAACCTGTGTAAAGTTAACATTTTCAATAGCATCAT GGCGTATTCTTTGTTTTAAAGTGTACATAGTAGGAGTAAATCTGGCGCCA GCTACTCTGAGCCAATGCGCCAAGACCAATCTCGAGTCTGCGCCGGAGAT ATCCAAAGcaaccaaagcagcaaaatttcaaaacaaatgtttctgCTCGC AGTCTAatctaccattttagaatctcatATTTGCACACTAGCGAGTAGTT TTGGCGAATTAGTCCTGGACAGAATCACGTGTAAATAAAACAGCGTGCTt ggataataaaaaatcatgcgCGAGTATAAATTTTAAGATGGCGGGNtaat tataaaatttatttataagatgctttgttgtctttttttttctttgtgta aacttgcatatgttttgcatacacgttgtcgtttttttttaataaggaac cttaactttgctctgagcctggagttccttatttttccagagcatttcag cctcaaagttccttatcgagttccttatttacatagctgctcagtttgga taaccatctcttactgttccttaaaacttgttttcttattctcagcctga gcagttcctaaacaattccttattttttgaaccattttcagccttgagtt ccttataaacgtgttccttataaaaaaaaacatgtactttccaactaaat ccaaccacggctttttcgttcctctatttttgcttATAATTCAAGATggt ggatggaaaggcgaaaaggtctattcagaTGTTTCTTGATGGCNctctat ttttgcatattaTTCAAGATGGTGGATGGAAAggggaaaaggtctattca gaTGTTTCTTGATGGCCAATTGACATCTAGCTAATCTCAAATTTTAATAA TGATATTAAACATAACTATACATGACATCACTTATGATTAGGAGATATAC ATTTTACAATCTTTTGATAATATTTAATTTCCTGCTTGTTATACTTGCAT CCACCAaagtgtggagtaattagttatgtAAAAGACTGTTGCCTTCGCTA AAAGGAgtattgctattttagcacttcaactttctttcattgaattgaat atttcaatttggaggGGATTGATGGCtcctaggctatattccaagcctta ttggagcaaatttgagctttaaaATCCTGACATCCTAAGAGAcaccgtcc tgatatgaaatcaaatatgtcaataagaatgtcctgggttgaaaattttc tgaaaaattaattagcaagAGAGACTCTTTTTAGGTACCCAAGATTGATT TGGCATTACAccattgcaaaatatttttcatggaaattaaCCTTTTCTAA TGCTAATGTAATCTaaataggaaacaaatattgaATTCTATTCTCTTTTG CTCatacattttaaatttcaagataagAACAgctattaataaaataaatg taaattgatattgacatatttaatgatgtcataatcaatgcatACTCCAC CTCCAGAGCACAGAAGgttcttattttattttcaatttttcacacagACT CAACATATTCTCACTTTTAAATCTCTTGGCCTTGGGATTTCTCCAAAAGC CGATTAAAATAAGATATTTTTACATACTCCACAAAATActtcatttacaa aatatcCTCATTGATGTAACTCTGAAACATATTATATTCAACAAACTTCG AAaccttaaaatttttaaaatttacataatttcgaACACTTTGAGGGGTC CATCAATTTCATCCActgatattttacaaattacatAGCTGTTTTAAGAT AACGATCGCAAATGTCATAATCAATTTTGTCAGTGCTGTAAATTTTTAAC AAtctccttttcattggataaatgccatcaaaatatacaaaattgGATGA TTACACATAGATTTACCCCTGCAAATACAGCTTAGATTCTTATTCATTAT GTCTATAAATTGAAGCTGGTAAAGACAATTGCATGGGTTAGgcgaaccct aaaaatatttttgtttccggtccaccgggtgacgaaaaaaccactcaccc ggccggccgcaaaaaatttttttttgctaaatttcgatcccaaaactcga ttttttaaagcactcgtaGAAGTTAAAATGATGGTCTTCTTNTCTTTCAT TgaattgaatatttcaatttggaggGGATTGATGGCtcctaggctatatt ccaagtcttattggagcaaatttgagctttaaaATCCTGATATCCTAAGA GAATCAAATATGtcaataagaatgtcctgggtggaaaattttctgaaaaa ttaattGGCAAGGGAGACTCTTTTTAGGTACCCAAGATTGATTTGGCATA ACAccattgcaaaatatttttcatgacaGTTAACTTTTTCTAATGCTAAt gtaatctagataggaaacaaatattgaATTCTATTCTCTTTTGCTCatac attttaaatttcaagataagAACAgctattaataaaataaatgtGAATTG ATATTGagatatttaatgatgtcataatcaatgcatACTCCACCTCCAGA GCACAGGAGGttcttatttcattttcaatttttcacacagACTCAACATA TTCTCACTTTTAAATCTCTTGGCCTTGGGATTTCTCCAAAAGCCGATTAA AATAAGATATTTTTACATACTCCACAAAATActtcatttacaaaatatcC TCATTGATGTAACTCTGAAACATATTATATTCAACAAACCTCGAAacctt aaattttttaaaactttacatAATTTCGAACACTTTGAGGGGTCCATCAA TTTCATCCactgatatttttaaattacaTAGCTGTTTTAGGATAACGATC GCAAATGTCCCGAAATATCACACCAACGTTATCCTACCGGGAGTAATCCT GGTTGGATACTGATTTGatattttataatatttataaattattgccctta atgaatgtgaattgaTATTGAcatatatttaatgatgtcataatcaattt TGTCAGTGCTGTAAATTTTTAACAAtctccttttcattggataaatgcca tcaaaatatacaaaattgGATGATAACACATAGATTTATCCCTGCAAGTA CAGCTTAGATTCTTATTCATTATGTCTATGAATTGAAGCTGGTAAAGACA ATTGCATGGGTTACTGGCGATTAATGGGTTTTTTAAGCTATCTTCAGTTA TAATAAAAGGTAGAAATAACTGAACATGGAAAGGGTTCAATTTTATGTTT AGATTTCCATTTCCATTTATATTGGATCCCCTTGCATGGTTTATAGACCA TTCAATGACCCAAATAGCTCAAAATATTCTATTGTTTCTTGCTATAGATG gccacattttttcttttttcacacTTTCCTTTCATGAAAAGTTGGACCCC ATTCAGTAGGGTAGGCTCTAATCCCATACAGACCCAAGGATATTCCATCT CACCTGAGTGGGTTAGGCCTTAGCCCCACTCCATTTGAAAACTCCTTAAG TGGGATTTCGGCAAGTTTGGCTGGTTCGGTTCTCATATGAACAGAATCCT TTTTTCATGCAAAATAGTATAAAGGAGAGATGAATCTCAAATGAGATCCC AGTCTGTTGGCCTGCTTCCATGTTAATGGCCCCTTTATTTCAATATCCTT ATCTTGGCCTTTATTGATTATTTAATTGTTGGTTCATTTCAGttgatatg attattttttaggCAAAGACCAAGGTTGCAGATAAAGAGCAAAGTAAGAG CTTAACTTTAGTTGAGTAAGAAAATAGGGCTAGATTTGTAtgctcttttt ataagaataacctTTATAGAAATATTATGGTTAGTTTTTTGAGTTAAAAC TTTTGAGTTTAGAACACTAGAGAAAAAGAATCTTCCTCAGACTAACTATT CCAGACTCTATTCTCATGAAAAGcaggtatttttttctttaagtttTTAT CTTATGATCAAGATTATTACTAatgtctgtccagatataattggcagtgg aaacaagaatgcctgtaacttttgatagtcaaatataatatagtttcgaa ataataaatgataccaatagcaataataccaatgcaccaacacttaacat tttccaacgtTTAATTGCAcagttcaaaaaagataacatgacccccgttt ttagtaataagttggagatttgatatttcacagaaaaatgctaccaaggg gtatttcgggtcccatatcttctgaaggacttttttgtttgccttgaaat ttaacaaacttcttaacctaaggttgaactaccactggtttaaaaatgaa cgttatagcataactagaaaaaaagctcaatttttgcaatcgcaaattta accgctaaaaatcgcgaatttttcaaccaaaaatacattcaaatacagCA CCTTTGACTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctctaaaacaagca aaaaaaatttccataattatatttgactatcaaaagttacaggcattctt gtttccactgccaattatatctggacagactttaggagaaattatttttt ttccaaaaaaaatattttttttaaatactcccATGTCTTAATTGCATATC GAATAAATCCAGATTAATCCATTCATATgttctgaaaaattgaaatttat cttGGATTACTTGTTACTTTATGGTATGAATTCCCaagttaaaaaaatgg aaaataactcggaaagctaaaggaagcaaaaattcccgagttacaaattc aaaaataacttggaaagctaaaggaagaaagAATTCcagagttaaaaaat gaaaaataactttgaaagttaaaggaagcaaaataaaccgagttatgaaa tgtaaaatgacgtcactgaattccaaaaatgacgtcataactcgggataa cttgGTTTTTTcgtaattcggtttttttaactcggaaaaaataactcggg aattccgggcctctgACTTTATAACCTTAGAACTTCATTCTAGAACTACT AATAAgcagtttttttattattaggTTCTCAATCATCAAGTGGCGAGCAA AATCAACAATCAGAGATGAACTTTCAGAATGTCACTGAAGCATGCCAagg ttatttttgaaatttatttgaaacaTGTCAGAAGCTTTTTTCAGTATAAT GAAAAGGGAATTTCGGCGTGGAATTCTGGGCAAGGGAGCCAGTGTGAGAT ATATAAATAGCCGTATCAAAAGCGCAAATTGGGCTAacttgttttttctg attttattaTAACCTTGCTTTAAAATGGAGGGGGttaatctaaagaatcc tacatctactaaaaatagacaaaaagaaggacaaatttcataaaaaatga catattgcgcatccacaaccccgacccgGTTAGTTTGTCCATGTTTATCA CAGGATTTAACTACATATGGCTAAAAGAAAGagaaattacgcatgcgtgt tataaTGCAGGATtttttagaggaacagactgaaATTGAGGCGAATATAT TGAATTTTTAGTATTTGTTGATTTATGATGTAATCATTTTTATTGCATCT TTAGGAATCAAGCAAGAGTTTGcttattcattttcaaaatgggCGGCAGC CTTTCAGTAAGTGAATTTAAActacaaaaatcaatttaaaatgaaacata aaaagggactaatATTAAAATTTGACCGTTCACAAAGACATTCCCATAGA CTTTTTTACGTTTTACTTACTTTGagggaattaattttggcgagcatgaa aatcctaaaaaattttgaTCTCAACAATAACGAATTTTTTtaagtacttt aatgggataaattttcgcgggaattaattttcgcggatttcccGGATTTc ccggatttgggtgtcatccgcgaaaataagtcccattggaaatttgaaaa aggcccatccgcgaaaattagtttcagcaaaaaattagtttcagcgaaaa atttgaattttttttgcaatccgcgaaatttctatttttatcgtttttta ttttttttctacatgagggcacgcaaccctcgaaaaaggtcaaATCCTCG ATATGCTtgttagcaaaaaatcgttttcctcaaaattttcttcacaaatt tagAAACTTGGAAAAggtattggaaaattttttatctaaagtgatcgctt attaaaagcttttcaatgcaagagggtaatccaactggcttgaaatttaa catttaaaatgatatgtaagaaaaggagggaaaacggaaaacaaaattct taatttcctggaaaaaatttatttcaatgttttgacccttttcaaaaatt ttaatttgtaccccaatccgcgaaattaaatccccgcgaaaaatcaggaa atccctcatccgcgaaaattaatccccgcgaaatcttaaaattttgcgga tgagctcaaccgcgaaatttaatcaccGCAAagatttatcccattaaagt agtctAAAGGTACACTATTTCCATTTTACTAAGTGTGTAAGGTTCTGGGT TGATTCTCAAATTAGGTCTAACCTATTTAAAAAATAGTACTTTTTACCTC TGCTTAATGTTTGTCGATTTAAAGCGTAAACAATGGTCAGCTAAACCAAA GAGAATCTCTCTACTGTGGTAATTgttctaagaatattttaatatCAGAA AATCATACAATGTTTTGATATCCTATTATATCCTATGAGATGGTGCCTCT CTGCCTAATGTTTATCAGTTGAAGCATAGACTGAACTGAACTGACAACTA GAGCCAAAGGGAGAAAAACTGTTATAAGAATACTATAAGGAGTTTTATTT GAATCATAAAATCTTGAAGTCCTACTTTTGTGTTTTTAGAGAAAGTGAAA AGATCGACATGTTTTTCGAGAAAAGGTTGGATGAGCTTATTCAAGAAGCA GAAAAAGCCGAAGACATTTTGAAATCACAGAAGGCAGCTTTAAAAGAGAA ATTAAGATGTTTGACAAAGACATTAAATCAAGTTgtagaaaatgaaagtt aaaataaatataatgcAGAATCTTTAGTCAAATTTTGTTCTTAATAAAAT AGAGTTCGATCCCAGGGAAGGGGTGCTCGATTTAAAAAGTTTAGATTCTA AAGTCCCCTTGGTCGGTCCCTTACCTTGATAGTACCCTTATAGAATATTT TAAATGAAATCTTAGCTCAAAGTATTTGTTTATTTATCATATATAGTTTT ATGTGTTTGTTATTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071835TCONS_00071835Clytia hemisphaericatranscript
TCONS_00071836TCONS_00071836Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_64supercontigscaffold_64:869..10784 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NDUFV2NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.56 95.67 107.57 110.49 52.84 41.38 52.05 55.39 58.74 50.31 57.07 56.82 56.02 53.33 50.35 58.42 77.01 89.22 21.81 23.72 77.22 74.93 51.59 52.32 67.28 67.55 53.16 51.33 39.47 37.61