TCONS_00070670 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070670
Unique NameTCONS_00070670
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2783

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070670 ID=TCONS_00070670|Name=TCONS_00070670|organism=Clytia hemisphaerica|type=transcript|length=2783bp
GGAGGATACGGCTTCAAATGGTATGACGTTTGTACAATATTAAACCCCCG
TCTTTATATACTGAATATGAGGAAACCATAGGGTTGTTGGACATTTTATG
GACATCAGATGGATGTTAGACCGACCATTtcgaaatgaaaaacaaaacac
tTATTCATAATTGAGACACTCTTTCTGTATAGAAATGTTTCCTCCcttaa
gctttttttttttcataaaaaatataacaaacatttttaaaataatgtga
aaaaaaaatcaaggagGATATTGTGATGGGTTAAATAAGAACTATACACA
CTAAATTCTCAATTTGGTGAAAAGACGTGTTTCAATATCGAATTAAATAA
ATAGTTATACAGTTCATTCGATAAAGTTGGATTTTGACTGAAACGACAAC
AATAGAGGATAGGATCCACTCGTCAATACCAAATTCAACTTATCCTACAG
AGAACTTGTTGAAACATTAGAATACAGTATTTAGAATAAAAgATGATCCG
AACAACGGAAAGTAGCTCCAGTTCTCCATATCTTCCACAAGAATCACCAA
ATGAAGTGCCACATCTACCAAAAATGTTAGCAATGACAagtgctgagtca
tcaaaatcAGAAAACGTTCCAGCGCTTATTCAAGCAGATGCCAACTCGAA
TTATCAGGCAGCACAGCAAGCAGTACAGGTGACGTCATCAGCGGTTCACG
CTCATCAGATCATTCATCCCATTGTTAACTCAATACCACACCCACTTCCA
CCACCACCATCCTCTGTAGGGCCACCGGGAAGCCACCAACAAGCACAGGT
TGAGGAGGATGATGACCATGTGAAGCGACCAATGAATGCTTTCATGGTAT
GGTCACGAACAGAGCGACGAAAACTGGCACTCAAATTCCCAAATATGTTA
AATTGTGAAATCTCCAAATTATTGGGCGCTGAATGGTCTCGTATGTCTGA
CGAGGATAAATCACCTTATGTTCAAGAAAGCAAAAGATTAAGGACAATTC
ACAGTCAAAAATATCCCGATTACTCTTACAAACCAAGACGGAGGAAACGA
AAAACGCAACAAAGCCAACCGCCCTATCCATCAATTAACTTCCAAAGTGC
ATCCGCCAACATCCCACCACCCTACCAATATCCACCTGCAGCAGGATTCG
CAAAAATCTCATCAGATGCATTTAAAATGTCCAGCTTTGGTGGTGGTGAA
AGTGGCTTTCCAGTACCGCCCCTTAACGATCCAGGAAAAGCACTCAGCTA
TCTTAATTCAGCTGCCGCCATTGGATTACCAGATATGAAATCATACTATA
GTCTCGCACCGCCCAATCCAAATCTCTTTCCGCCCTCCTCGTCAAACAGC
TATACCTCACTGTCATTGACTGGGAACACACCAACTAACTTATATTCGTC
CTCCAATACTTACATGCCAGCCATGTTTAAGGACGGACCAAGCCATTACT
GAAAAAACGTCTCATTTGACTCTAAGAATAAGACTaagtatttttaatca
aaaaaaaaatttgaagcaCAGTTTTGGTCAAGATAATCCCTCATGAAAAA
TAAGTACAGTATGTCAATCGGTTGTGATAATTACAGTACTTCTTAACCAG
AAGTTTAAACATCTTACGAAAGGTCAATCGTGTACATAAACCAAACAGAT
TATATTTATTCTCAAGGTCattgtgaatcaaaattgattTGAACCTGGGA
TTCTAATCGCAGATTATTGCTAATAAGGATGGCTCTAATTCGTTGTTTCA
AGATATTTATCATTTGCTGAAACCATGTTCTCAATGCATGACCATGACTA
TTAATCTATGATATTATAAAATCAAACGTATTTAAAATATTATTCAAATT
GCACCAAAGCACTGGTTGTCACATGACCTAAAAGCCAATTAGTTATGGTG
CTTCAAAAGCTTTTATACTGGATTATTGCTGTTGGCACCTTCAAAAACAG
ACAATATCAAGTCAAATTTCAAGCTTGATAAAGGCATGTAAAGTTTATAT
CAGAAAGTAAATGTCAGTATCGGATCTGAGGAGGAGGGCTCAAAATTTAT
ATCGGAGAGTCTTAATTTCCTTATAAGGAGTATGGATAAAAGAAACACTC
TCCATCGTTGATTTTGAACCGCTTTTAGATCCGCTGCTGAATGTAAACAG
AGGAAGACTTTTTATACTCGATTTTCATAATATTCATGATGTACTCTTTT
ATATACGGAAACATGTGCCATTTTTGGTTAAACTCTAAAGTGGTAATTTC
ACAGCAGATCTTCAACAACACCCATCCCTGAAAAGTTTTAGCTCGGGGTT
TCGGAAACACATCTTCTATATAGAAACTTGGAGAATAGACCTTTACATAA
ATTACGCCACGAACATAAAAATactgccatggtgattaactaccagagga
ttttattaaaactactttctattcataaaaaaatcatttaatctctcaag
ggacataatcatcATGGTacttgtttgaatacgaggcaattgatgttcgt
gacgtaatttaaaaaattcttattaaTCTTGTAAAGACTCGATCCTTTTC
AaatgtttccgtataaaagattacgtcatgtatttcatgaattttaggTC
TTTTTCACACCATCAGTTTTTATAAATTCTTTTAAGCTGGActttttttg
tatatattttttctctgCATCCACAtatataaaataattcttttgtgtAC
CTATTGTAAATAAAGAAAGCATTCATTCATATTGTAAATTTTCAATAGCT
TTaggtgaaaaagttttttcgactGAAAATTAT
Run BLAST on NCBI

transcript from alignment at scaffold_57:358062..365418-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070670 ID=TCONS_00070670|Name=TCONS_00070670|organism=Clytia hemisphaerica|type=transcript|length=7357bp|location=Sequence derived from alignment at scaffold_57:358062..365418- (Clytia hemisphaerica)
GGAGGATACGGCTTCAAATGGTATGACGTTTGTACAATATTAAACCCCCG TCTTTATATACTGAATATGAGGAAACCATAGGGTTGTTGGACATTTTATG GACATCAGATGGATGTTAGACCGACCATTTCGAAATGAAAAACAAAACAC TTATTCATAATTGAGACACTCTTTCTGTATAGAAATGTTTCCTCCCTTAA GCTTTTTTTTTTTCATAAAAAATATAACAAACATTTTTAAAATAATGTGA AAAAAAAATCAAGGAGGATATTGTGATGGGTTAAATAAGAACTATACACA CTAAATTCTCAATTTGGTGAAAAGACGTGTTTCAATATCGAATTAAATAA ATAGTTATACAGTTCATTCGATAAAGTTGGATTTTGACTGAAACGACAAC AATAGAGGATAGGATCCACTCGTCAATACCAAATTCAACTTATCCTACAG AGAACTTGTTGAAACATTAGAATACAGTATTTAGAATAAAAGGTAACAAT TTTATTTTTAATAATTCTATATTCTTTCCTATTCTAACATCACCTTTTTT GTTTAATCACTTATTGTTTTATCTTATTCTGTATAACTTGTATGGTACTA AGAAAGGTCCATTTATACCCTATCAAACTCTTCTATATGATATTTACATA TATCTTACTAGGGTTATTTTACTGTCCCAGTCAATAGGGAATTTTTAATT TCCCTTAAAAGGAATGCACTTTGCAAAAATCCTTTTTTTTAGGAATCCTG TTTAAATTGTTTACTCACCTTGAGTATGACCTTAGCATATTTTTTTGCAG AAACTTTACCGGCGTTTTAAACTATACTTGATAACGCCTCATTCAATTGG ATGGCTGACTTCTCTACTACCCCCTACCCCATAGAGTTGACTCTCACCAG TGAAAGAGCTTTTGGCGCTAGCTTAATGTTACTTGAAAAGGGGGGGGGCG TACGGGGTTTGCGATTTCCGAAATACCGAATAATTTTGCTAAAATTTCCG AAATTCCGTAAAAAAATACTTGCAATTCCGATACCGATTTTTTGGGCATT TTTCCTCGTTTTGACAAATTTTTCATCAAATTTGATTTTTCATGTATGAA TTCCGAAATACCGAATAATTTTGCTAAAATTTCCGAAATTCCGTAAAAAA ATACTTGCAATTCCGATACCGATTTTTTGGGTATTTTTCCTCGTTTTGAC AAATTTTTCATCAAATTTGATTTTTCATGTATGAATTCCGAAAAAAGGGG ATAAAAACTTTATAATACCAAAATTTCGAAGCAAAAACTCATGGATTTCT GATACCGAAACAATTTCAGAATTCCGAAATACCGAAGGAATTTTACCTAA TTTCCAAATTTCCGAAGAAAAAAGGGTCGATTTCGGCAATACCGAAAAAC CGTACGATATCTCGACAAAGTTGTATAGTTTTTTTTTGGTGCACCCGGTA GAGAAGACAAGAAAAGATACTCTTAAGCACCCGATTTCTTAGAGAAAAGG ACAAAAATACTCACAAAAAGGTGAAAATACAACCCTGCTTCGAAAATGTT TAGGCTTATAAAGCTCAAAAAGTTAAACAACAAAGTTAAGAGCATCCGAA AATCTTCAAAAATTTTGAATGGTCCTATTAAAAAAGGTAACTAATTGTAG CCAGTACCTTCCCACCAATTTTTTTCACTTTTTATAAGAACATCAAAAAA CCTTTGAAGCACTTTACAGCTTTACCCTATTAAATCAACCTAGACTTTTA GGGGCGGTTCAGAACTAGGGGGGGCTTTTCCTGTACCACCCCTTAACTTT TGATCTAGTGGGTCTTTTTGGATGAAATTTGGCACACAAGATCCTTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA AAATTTCCTTTGTTCTTATAAATAGCTATTGTATTCTAACAAAGGCTTTA GAAAAAAGTTGCCTGAGTTCAAAATGCTTATTTTTTCCTAAATATTCAAT AAATGACGGTTTAAACGATATATTTGACATTAAAAATAGATTTGTACTGG AAAAGTGTCAATTTTTGTGACACCTTACTGTCAGAAATGTCATCATGCTC AAGGTGTGAAAATTTTTAGGTGTCAAATTTTTTTTTTTTTGAAGCTTAAT AAAAGTTAGGAATTTACAGAAAATCTCATGACAAAAGCTCTATTATTTTA GGAGCTATTACCAATAATTTGACCTCCGAACAGAAACAGCCCCCCCCCCT AGGCCGAATAGGGTTAATCCTAAAAATATTCTTAACATGTTCTTATTTTC ACCATTTATATGAGTATTTTTGTCGATGTTCTTATATTGTTTGTTCTTAT AAAAAGAACGTATTCATTAATTGGAATGTTTACTTAAATTTGGTACGATT CTTCTAACTAGATGATCCGAACAACGGAAAGTAGCTCCAGTTCTCCATAT CTTCCACAAGAATCACCAAATGAAGTGCCACATCTACCAAAAATGTTAGC AATGACAAGTGCTGAGTCATCAAAATCAGAAAACGTTCCAGCGCTTATTC AAGCAGATGCCAACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGGTG ACGTCATCAGCGGTTCACGCTCATCAGATCATTCATCCCATTGTTAACTC AATACCACACCCACTTCCACCACCACCATCCTCTGTAGGGCCACCGGGAA GCCACCAACAAGCACAGGTGAATTGATCTTTTTTTCAAGGGTTTTGCTTT GTTTTTTGATAGGCTGGAAAATGAGAAATTAACTCAAGCGAATTTTAGAT CTTAGCCTGGCGAATTCTTAGCAAGCCCATTGTATTTATCAGCGTGAGTA TGTCGGTNATGCCAACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGG TGACGTCATCAGTGGTTCACGCTCATCAGATTATTCATCCCCTTGTTAAC TCAATACCACACCCACTTCCACCACCACCATCCTCTGTAGGGCCACCGGG AAGCCACCAACAAGCACAGGTGAATTGATCTTTTTTTCAAGGGTTTTGCT TTGTTTTTTGATAGGCTGGAAAATGAGAAATTAACTCAAGCGAATTTTAG ATCTTAGCCTGGCGAATTCTTAGCAAGCCCATTGTATTTATCAGCGTGAG TATGTCGGTACAAAAATATTGATAAAAAACGGGTTGTCCAAAACAATGTT TTAAAAACTAATGGATATTGTTTTGAGGATGAAAATTACATGAGTGTAAT AGTAAAGAGTGTATCTTTCAGAAAATAGCAATATATTCACCGAAAGAGTG GCATAGGATGAAATACCACTTTTTATGTCACCCGAAATCGAAAATCGTGG AATTCTTCATCCTTTTTGGACCTACCGGGAGGTCCTTTAATTTGACCGTT GTCCGTTCGTCTGTTACAAGCTTTTCTCGGGATTGGCTCATTAGTTTTTT TTAATTTTTTGCACAATGATACAAAATAGCAATGCCTGAAAAGTGACGGA GCCCGATTTTTGAAAAAAAAATTTGGGGTGCAAATTTGGGCCAAAATCTA CCTAAAAATAAGGTTTTTTGGACTTGGTGCAAAATTGCTTCATTAGTTTT TCCTGATTTTTGGCAGAAATATAGAGTGCAAGGTACCCNACATGTGCCAA AAAATGGGGTTTTTTGGACTTTGTGTGAAATTGCTTCATTAGTTTTTTCA AATTATATCTAAAACGTAACTCAAGCTTTTTTTTCCGGAAAAATTTTTTT GGCTGTAAAAATCGGATTTTCTTATTTGGGGAAACTCCCTTTTGTCATAT TTAGGGAAAATGAGCATTTCTAGAGATTGGCTTGGTGTTTTTTTCTTATT TTTTGCATAGTGCTATAATATGGTAATATTTAATTTCTGATGGAGCCTGA TTTTCGAAAAAATAATTTTTTGAGCAAATTTGGGCAGAAAAGTTCCTATA TTCAAGCTGCTAATTACACTTTCTTACTCTCTTGCTATTTGTCCTACTTT TATCTGATTTTGATCACCAGGTAGGTCCATTCAGCATGTTGCTTGTTACT CCTTAAATTTAAATTTGAAAATTTATGGTATCAACAATAGATTTCCGAAG GGTTTAGATGATAAAACCGTTTTAAAAATTGCTGTAGTAAAAATCAGAAA ATCTTGAATTTCTGGACTATTTCATCCCAAATTACTCCGAAACCTATATC ATTGGAATCTTCGTGGAAAAATACTTCATTTTTGAAAATAAGGTCTCAAA ATTCCTAACATTAAAGTTCAAGAGTTCTTTTGATTTGGAGACGTACGATA AACCTCCTCCAATCTGATCTTAAAAATGCCAAGAATTTTTGCAAAGAAAT TAGGATTTTCCAGACAAAATCTGTGCACCCATGTTGAGGAGGCCCATTAC CGTTCCATGGGGATAGGTTCTGAAATGCAGTGTCCATATGAGTAAAAATT GAAAATCTGTAAAGTTTCAGAATTCCAGAGAGTAATGATTCTGTAATTGC CTCAAATTCCAAGGCGGTAGGTCACAAAAAAGTAGACCTCGTCAACAGAG GGGGTACATGTTTTCTTTTGCTAGAAAAGCTAATTGGGCAGTCGACCCCC TGGACATTCAAAATTACCCTCAAACAGAGCAAGTTTACCCCCGGACAAGG CAAATTTTGTAGATTTTTCACTACCCCCGGTAGACTGGAGCCGTTTATAA TGCGTGTAATACTAATAATACCAATACTAATAATAATAATAATACGGGAT TTAGTTTGTATAAACGACTGGAAGAATCCGGTGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGCCACTATATCCTCCATCC ACCCCCCCATGTACGAACATTTTCTGGAAGAGCCTATTGTGTAATCTTTG AATTCTTTAAAAACGTTTTCAGGTTGAGGAGGATGATGACCATGTGAAGC GACCAATGAATGCTTTCATGGTATGGTCACGAACAGAGCGACGAAAACTG GCACTCAAATTCCCAAATATGTTAAATTGTGAAATCTCCAAATTATTGGG CGCTGAATGGTCTCGTATGTCTGACGAGGATAAATCACCTTATGTTCAAG AAAGCAAAAGATTAAGGACAATTCACAGTCAAAAATATCCCGATTACTCT TACAAACCAAGACGGAGGAAACGAAAAACGCAACAAAGCCAACCGCCCTA TCCATCAATTAACTTCCAAAGTGCATCCGCCAACATCCCACCACCCTACC AATATCCACCTGCAGCAGGATTCGCAAAAATCTCATCAGATGCATTTAAA ATGTCCAGCTTTGGTGGTGGTGAAAGTGGCTTTCCAGTACCGCCCCTTAA CGATCCAGGAAAAGCACTCAGCTATCTTAATTCAGCTGCCGCCATTGGAT TACCAGATATGAAATCATACTATAGTCTCGCACCGCCCAATCCAAATCTC TTTCCGCCCTCCTCGTCAAACAGCTATACCTCACTGTCATTGACTGGGAA CACACCAACTAACTTATATTCGTCCTCCAATACTTACATGCCAGCCATGT TTAAGGACGGACCAAGCCATTACTGAAAAAACGTCTCATTTGACTCTAAG AATAAGACTAAGTATTTTTAATCAAAAAAAAAATTTGAAGCACAGTTTTG GTCAAGATAATCCCTCATGAAAAATAAGTACAGTATGTCAATCGGTTGTG ATAATTACAGTACTTCTTAACCAGAAGTTTAAACATCTTACGAAAGGTCA ATCGTGTACATAAACCAAACAGATTATATTTATTCTCAAGGTCATTGTGA ATCAAAATTGATTTGAACCTGGGATTCTAATCGCAGATTATTGCTAATAA GGATGGCTCTAATTCGTTGTTTCAAGATATTTATCATTTGCTGAAACCAT GTTCTCAATGCATGACCATGACTATTAATCTATGATATTATAAAATCAAA CGTATTTAAAATATTATTCAAATTGCACCAAAGCACTGGTTGTCACATGA CCTAAAAGCCAATTAGTTATGGTGCTTCAAAAGCTTTTATACTGGATTAT TGCTGTTGGCACCTTCAAAAACAGACAATATCAAGTCAAATTTCAAGCTT GATAAAGGCATGTAAAGTTTATATCAGAAAGTAAATGTCAGTATCGGATC TGAGGAGGAGGGCTCAAAATTTATATCGGAGAGTCTTAATTTCCTTATAA GGAGTATGGATAAAAGAAACACTCTCCATCGTTGATTTTGAACCGCTTTT AGATCCGCTGCTGAATGTAAACAGAGGAAGACTTTTTATACTCGATTTTC ATAATATTCATGATGTACTCTTTTATATACGGAAACATGTGCCATTTTTG GTTAAACTCTAAAGTGGTAATTTCACAGCAGATCTTCAACAACACCCATC CCTGAAAAGTTTTAGCTCGGGGTTTCGGAAACACATCTTCTATATAGAAA CTTGGAGAATAGACCTTTACATAAATTACGCCACGAACATAAAAATACTG CCATGGTGATTAACTACCAGAGGATTTTATTAAAACTACTTTCTATTCAT AAAAAAATCATTTAATCTCTCAAGGGACATAATCATCATGGTACTTGTTT GAATACGAGGCAATTGATGTTCGTGACGTAATTTAAAAAATTCTTATTAA TCTTGTAAAGACTCGATCCTTTTCAAATGTTTCCGTATAAAAGATTACGT CATGTATTTCATGAATTTTAGGTCTTTTTCACACCATCAGTTTTTATAAA TTCTTTTAAGCTGGACTTTTTTTGTATATATTTTTTCTCTGCATCCACAT ATATAAAATAATTCTTTTGTGTACCTATTGTAAATAAAGAAAGCATTCAT TCATATTGTAAATTTTCAATAGCTTTAGGTGAAAAAGTTTTTTCGACTGA AAATTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043969XLOC_043969Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070670-exon-scaffold_57-1575043694:364927..365418TCONS_00070670-exon-scaffold_57-1575043694:364927..365418Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1575043694:362552..362857TCONS_00070670-exon-scaffold_57-1575043694:362552..362857Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1575043694:358062..360046TCONS_00070670-exon-scaffold_57-1575043694:358062..360046Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1510915933:364927..365418TCONS_00070670-exon-scaffold_57-1510915933:364927..365418Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1510915933:362552..362857TCONS_00070670-exon-scaffold_57-1510915933:362552..362857Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1510915933:358062..360046TCONS_00070670-exon-scaffold_57-1510915933:358062..360046Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1491911889:364927..365418TCONS_00070670-exon-scaffold_57-1491911889:364927..365418Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1491911889:362552..362857TCONS_00070670-exon-scaffold_57-1491911889:362552..362857Clytia hemisphaericaexon
TCONS_00070670-exon-scaffold_57-1491911889:358062..360046TCONS_00070670-exon-scaffold_57-1491911889:358062..360046Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:358062..365418 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.761317 0.554429 0.290527 0 2.30018 1.21175 7.30965 7.39067 2.62958 1.89905 2.8801 2.59974 6.50379 5.90976 5.53249 14.8929 6.34083 4.8603 1.5714 2.87097 7.9993 5.63071 3.38984 5.09692 1.83129 2.94189 0.588404 0.332804 0.25242 0.128588
Blast
BLAST of TCONS_00070670 vs. Swiss-Prot (Human)
Match: SOX3 (Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.326e-26
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  808 DDDHVKRPMNAFMVWSRTERRKLALKFPNMLNCEISKLLGAEWSRMSDEDKSPYVQESKRLRTIHSQKYPDYSYKPRR 1041
            D D VKRPMNAFMVWSR +RRK+AL+ P M N EISK LGA+W  ++D +K P++ E+KRLR +H ++YPDY Y+PRR
Sbjct:  135 DQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRR 212          
The following BLAST results are available for this feature:
BLAST of TCONS_00070670 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SOX31.326e-2661.54Transcription factor SOX-3 OS=Homo sapiens GN=SOX3... [more]
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