XLOC_043969 (gene) - C. hemisphaerica

Overview
NameXLOC_043969
Unique NameXLOC_043969
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:358062..365462-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043969 ID=XLOC_043969|Name=XLOC_043969|organism=Clytia hemisphaerica|type=gene|length=7401bp|location=Sequence derived from alignment at scaffold_57:358062..365462- (Clytia hemisphaerica)
ATCAACGAAGCAATGCTTCCTTTAATGATCAAACAAGGGAAATTGGAGGA TACGGCTTCAAATGGTATGACGTTTGTACAATATTAAACCCCCGTCTTTA TATACTGAATATGAGGAAACCATAGGGTTGTTGGACATTTTATGGACATC AGATGGATGTTAGACCGACCATTTCGAAATGAAAAACAAAACACTTATTC ATAATTGAGACACTCTTTCTGTATAGAAATGTTTCCTCCCTTAAGCTTTT TTTTTTTCATAAAAAATATAACAAACATTTTTAAAATAATGTGAAAAAAA AATCAAGGAGGATATTGTGATGGGTTAAATAAGAACTATACACACTAAAT TCTCAATTTGGTGAAAAGACGTGTTTCAATATCGAATTAAATAAATAGTT ATACAGTTCATTCGATAAAGTTGGATTTTGACTGAAACGACAACAATAGA GGATAGGATCCACTCGTCAATACCAAATTCAACTTATCCTACAGAGAACT TGTTGAAACATTAGAATACAGTATTTAGAATAAAAGGTAACAATTTTATT TTTAATAATTCTATATTCTTTCCTATTCTAACATCACCTTTTTTGTTTAA TCACTTATTGTTTTATCTTATTCTGTATAACTTGTATGGTACTAAGAAAG GTCCATTTATACCCTATCAAACTCTTCTATATGATATTTACATATATCTT ACTAGGGTTATTTTACTGTCCCAGTCAATAGGGAATTTTTAATTTCCCTT AAAAGGAATGCACTTTGCAAAAATCCTTTTTTTTAGGAATCCTGTTTAAA TTGTTTACTCACCTTGAGTATGACCTTAGCATATTTTTTTGCAGAAACTT TACCGGCGTTTTAAACTATACTTGATAACGCCTCATTCAATTGGATGGCT GACTTCTCTACTACCCCCTACCCCATAGAGTTGACTCTCACCAGTGAAAG AGCTTTTGGCGCTAGCTTAATGTTACTTGAAAAGGGGGGGGGCGTACGGG GTTTGCGATTTCCGAAATACCGAATAATTTTGCTAAAATTTCCGAAATTC CGTAAAAAAATACTTGCAATTCCGATACCGATTTTTTGGGCATTTTTCCT CGTTTTGACAAATTTTTCATCAAATTTGATTTTTCATGTATGAATTCCGA AATACCGAATAATTTTGCTAAAATTTCCGAAATTCCGTAAAAAAATACTT GCAATTCCGATACCGATTTTTTGGGTATTTTTCCTCGTTTTGACAAATTT TTCATCAAATTTGATTTTTCATGTATGAATTCCGAAAAAAGGGGATAAAA ACTTTATAATACCAAAATTTCGAAGCAAAAACTCATGGATTTCTGATACC GAAACAATTTCAGAATTCCGAAATACCGAAGGAATTTTACCTAATTTCCA AATTTCCGAAGAAAAAAGGGTCGATTTCGGCAATACCGAAAAACCGTACG ATATCTCGACAAAGTTGTATAGTTTTTTTTTGGTGCACCCGGTAGAGAAG ACAAGAAAAGATACTCTTAAGCACCCGATTTCTTAGAGAAAAGGACAAAA ATACTCACAAAAAGGTGAAAATACAACCCTGCTTCGAAAATGTTTAGGCT TATAAAGCTCAAAAAGTTAAACAACAAAGTTAAGAGCATCCGAAAATCTT CAAAAATTTTGAATGGTCCTATTAAAAAAGGTAACTAATTGTAGCCAGTA CCTTCCCACCAATTTTTTTCACTTTTTATAAGAACATCAAAAAACCTTTG AAGCACTTTACAGCTTTACCCTATTAAATCAACCTAGACTTTTAGGGGCG GTTCAGAACTAGGGGGGGCTTTTCCTGTACCACCCCTTAACTTTTGATCT AGTGGGTCTTTTTGGATGAAATTTGGCACACAAGATCCTTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTT CCTTTGTTCTTATAAATAGCTATTGTATTCTAACAAAGGCTTTAGAAAAA AGTTGCCTGAGTTCAAAATGCTTATTTTTTCCTAAATATTCAATAAATGA CGGTTTAAACGATATATTTGACATTAAAAATAGATTTGTACTGGAAAAGT GTCAATTTTTGTGACACCTTACTGTCAGAAATGTCATCATGCTCAAGGTG TGAAAATTTTTAGGTGTCAAATTTTTTTTTTTTTGAAGCTTAATAAAAGT TAGGAATTTACAGAAAATCTCATGACAAAAGCTCTATTATTTTAGGAGCT ATTACCAATAATTTGACCTCCGAACAGAAACAGCCCCCCCCCCTAGGCCG AATAGGGTTAATCCTAAAAATATTCTTAACATGTTCTTATTTTCACCATT TATATGAGTATTTTTGTCGATGTTCTTATATTGTTTGTTCTTATAAAAAG AACGTATTCATTAATTGGAATGTTTACTTAAATTTGGTACGATTCTTCTA ACTAGATGATCCGAACAACGGAAAGTAGCTCCAGTTCTCCATATCTTCCA CAAGAATCACCAAATGAAGTGCCACATCTACCAAAAATGTTAGCAATGAC AAGTGCTGAGTCATCAAAATCAGAAAACGTTCCAGCGCTTATTCAAGCAG ATGCCAACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGGTGACGTCA TCAGCGGTTCACGCTCATCAGATCATTCATCCCATTGTTAACTCAATACC ACACCCACTTCCACCACCACCATCCTCTGTAGGGCCACCGGGAAGCCACC AACAAGCACAGGTGAATTGATCTTTTTTTCAAGGGTTTTGCTTTGTTTTT TGATAGGCTGGAAAATGAGAAATTAACTCAAGCGAATTTTAGATCTTAGC CTGGCGAATTCTTAGCAAGCCCATTGTATTTATCAGCGTGAGTATGTCGG TNATGCCAACTCGAATTATCAGGCAGCACAGCAAGCAGTACAGGTGACGT CATCAGTGGTTCACGCTCATCAGATTATTCATCCCCTTGTTAACTCAATA CCACACCCACTTCCACCACCACCATCCTCTGTAGGGCCACCGGGAAGCCA CCAACAAGCACAGGTGAATTGATCTTTTTTTCAAGGGTTTTGCTTTGTTT TTTGATAGGCTGGAAAATGAGAAATTAACTCAAGCGAATTTTAGATCTTA GCCTGGCGAATTCTTAGCAAGCCCATTGTATTTATCAGCGTGAGTATGTC GGTACAAAAATATTGATAAAAAACGGGTTGTCCAAAACAATGTTTTAAAA ACTAATGGATATTGTTTTGAGGATGAAAATTACATGAGTGTAATAGTAAA GAGTGTATCTTTCAGAAAATAGCAATATATTCACCGAAAGAGTGGCATAG GATGAAATACCACTTTTTATGTCACCCGAAATCGAAAATCGTGGAATTCT TCATCCTTTTTGGACCTACCGGGAGGTCCTTTAATTTGACCGTTGTCCGT TCGTCTGTTACAAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTTTAATT TTTTGCACAATGATACAAAATAGCAATGCCTGAAAAGTGACGGAGCCCGA TTTTTGAAAAAAAAATTTGGGGTGCAAATTTGGGCCAAAATCTACCTAAA AATAAGGTTTTTTGGACTTGGTGCAAAATTGCTTCATTAGTTTTTCCTGA TTTTTGGCAGAAATATAGAGTGCAAGGTACCCNACATGTGCCAAAAAATG GGGTTTTTTGGACTTTGTGTGAAATTGCTTCATTAGTTTTTTCAAATTAT ATCTAAAACGTAACTCAAGCTTTTTTTTCCGGAAAAATTTTTTTGGCTGT AAAAATCGGATTTTCTTATTTGGGGAAACTCCCTTTTGTCATATTTAGGG AAAATGAGCATTTCTAGAGATTGGCTTGGTGTTTTTTTCTTATTTTTTGC ATAGTGCTATAATATGGTAATATTTAATTTCTGATGGAGCCTGATTTTCG AAAAAATAATTTTTTGAGCAAATTTGGGCAGAAAAGTTCCTATATTCAAG CTGCTAATTACACTTTCTTACTCTCTTGCTATTTGTCCTACTTTTATCTG ATTTTGATCACCAGGTAGGTCCATTCAGCATGTTGCTTGTTACTCCTTAA ATTTAAATTTGAAAATTTATGGTATCAACAATAGATTTCCGAAGGGTTTA GATGATAAAACCGTTTTAAAAATTGCTGTAGTAAAAATCAGAAAATCTTG AATTTCTGGACTATTTCATCCCAAATTACTCCGAAACCTATATCATTGGA ATCTTCGTGGAAAAATACTTCATTTTTGAAAATAAGGTCTCAAAATTCCT AACATTAAAGTTCAAGAGTTCTTTTGATTTGGAGACGTACGATAAACCTC CTCCAATCTGATCTTAAAAATGCCAAGAATTTTTGCAAAGAAATTAGGAT TTTCCAGACAAAATCTGTGCACCCATGTTGAGGAGGCCCATTACCGTTCC ATGGGGATAGGTTCTGAAATGCAGTGTCCATATGAGTAAAAATTGAAAAT CTGTAAAGTTTCAGAATTCCAGAGAGTAATGATTCTGTAATTGCCTCAAA TTCCAAGGCGGTAGGTCACAAAAAAGTAGACCTCGTCAACAGAGGGGGTA CATGTTTTCTTTTGCTAGAAAAGCTAATTGGGCAGTCGACCCCCTGGACA TTCAAAATTACCCTCAAACAGAGCAAGTTTACCCCCGGACAAGGCAAATT TTGTAGATTTTTCACTACCCCCGGTAGACTGGAGCCGTTTATAATGCGTG TAATACTAATAATACCAATACTAATAATAATAATAATACGGGATTTAGTT TGTATAAACGACTGGAAGAATCCGGTGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCCGGCCACTATATCCTCCATCCACCCCC CCATGTACGAACATTTTCTGGAAGAGCCTATTGTGTAATCTTTGAATTCT TTAAAAACGTTTTCAGGTTGAGGAGGATGATGACCATGTGAAGCGACCAA TGAATGCTTTCATGGTATGGTCACGAACAGAGCGACGAAAACTGGCACTC AAATTCCCAAATATGTTAAATTGTGAAATCTCCAAATTATTGGGCGCTGA ATGGTCTCGTATGTCTGACGAGGATAAATCACCTTATGTTCAAGAAAGCA AAAGATTAAGGACAATTCACAGTCAAAAATATCCCGATTACTCTTACAAA CCAAGACGGAGGAAACGAAAAACGCAACAAAGCCAACCGCCCTATCCATC AATTAACTTCCAAAGTGCATCCGCCAACATCCCACCACCCTACCAATATC CACCTGCAGCAGGATTCGCAAAAATCTCATCAGATGCATTTAAAATGTCC AGCTTTGGTGGTGGTGAAAGTGGCTTTCCAGTACCGCCCCTTAACGATCC AGGAAAAGCACTCAGCTATCTTAATTCAGCTGCCGCCATTGGATTACCAG ATATGAAATCATACTATAGTCTCGCACCGCCCAATCCAAATCTCTTTCCG CCCTCCTCGTCAAACAGCTATACCTCACTGTCATTGACTGGGAACACACC AACTAACTTATATTCGTCCTCCAATACTTACATGCCAGCCATGTTTAAGG ACGGACCAAGCCATTACTGAAAAAACGTCTCATTTGACTCTAAGAATAAG ACTAAGTATTTTTAATCAAAAAAAAAATTTGAAGCACAGTTTTGGTCAAG ATAATCCCTCATGAAAAATAAGTACAGTATGTCAATCGGTTGTGATAATT ACAGTACTTCTTAACCAGAAGTTTAAACATCTTACGAAAGGTCAATCGTG TACATAAACCAAACAGATTATATTTATTCTCAAGGTCATTGTGAATCAAA ATTGATTTGAACCTGGGATTCTAATCGCAGATTATTGCTAATAAGGATGG CTCTAATTCGTTGTTTCAAGATATTTATCATTTGCTGAAACCATGTTCTC AATGCATGACCATGACTATTAATCTATGATATTATAAAATCAAACGTATT TAAAATATTATTCAAATTGCACCAAAGCACTGGTTGTCACATGACCTAAA AGCCAATTAGTTATGGTGCTTCAAAAGCTTTTATACTGGATTATTGCTGT TGGCACCTTCAAAAACAGACAATATCAAGTCAAATTTCAAGCTTGATAAA GGCATGTAAAGTTTATATCAGAAAGTAAATGTCAGTATCGGATCTGAGGA GGAGGGCTCAAAATTTATATCGGAGAGTCTTAATTTCCTTATAAGGAGTA TGGATAAAAGAAACACTCTCCATCGTTGATTTTGAACCGCTTTTAGATCC GCTGCTGAATGTAAACAGAGGAAGACTTTTTATACTCGATTTTCATAATA TTCATGATGTACTCTTTTATATACGGAAACATGTGCCATTTTTGGTTAAA CTCTAAAGTGGTAATTTCACAGCAGATCTTCAACAACACCCATCCCTGAA AAGTTTTAGCTCGGGGTTTCGGAAACACATCTTCTATATAGAAACTTGGA GAATAGACCTTTACATAAATTACGCCACGAACATAAAAATACTGCCATGG TGATTAACTACCAGAGGATTTTATTAAAACTACTTTCTATTCATAAAAAA ATCATTTAATCTCTCAAGGGACATAATCATCATGGTACTTGTTTGAATAC GAGGCAATTGATGTTCGTGACGTAATTTAAAAAATTCTTATTAATCTTGT AAAGACTCGATCCTTTTCAAATGTTTCCGTATAAAAGATTACGTCATGTA TTTCATGAATTTTAGGTCTTTTTCACACCATCAGTTTTTATAAATTCTTT TAAGCTGGACTTTTTTTGTATATATTTTTTCTCTGCATCCACATATATAA AATAATTCTTTTGTGTACCTATTGTAAATAAAGAAAGCATTCATTCATAT TGTAAATTTTCAATAGCTTTAGGTGAAAAAGTTTTTTCGACTGAAAATTA T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070671TCONS_00070671Clytia hemisphaericatranscript
TCONS_00070670TCONS_00070670Clytia hemisphaericatranscript
TCONS_00070669TCONS_00070669Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070671-proteinTCONS_00070671-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:358062..365462 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18 0.76 0.46 0.3 4.86 4.21 27.9 30.98 7.92 7.02 7.1 7.25 24.05 24.03 15.25 46.14 17.83 17.2 9.79 13 17.2 15.44 9.03 9.75 11.5 16.65 3.19 1.62 0.87 0.59