TCONS_00070571 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070571
Unique NameTCONS_00070571
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length660

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070571 ID=TCONS_00070571|Name=TCONS_00070571|organism=Clytia hemisphaerica|type=transcript|length=660bp
aaagattaataacatatgaaaaataaacaaataaagatGGAAGAAGAACA
ATGAGTGGCAGAAGAGGAGGAGGTTACAGTTCAGAGTTCGAAGAGCCTTC
TTCATCCTCTGGAAGTAAACGGAAAAGTTCATCATGGCGGAATGATTCAA
TCAGTGAAAAAGTGAAGATTGCCAGAGTTGACCATGGTGCATCAAGACCT
GCAAGATCAAGTTATATTGAAGAATATGAAAAAGAAGAACGGAAAAGCCA
TTTCGCCAAATTCTTATCTTTGAATGCATATCAACGTCATCAGAAGTTGG
TCGGAGATTACCTTCGTTACTATGGAGGGAAACCGGAACATTTTAAAAGA
GACAGTTCAAAAGACAAAACAGATTATGATGTGCTACGAGAAAACCACAA
ATTTATTTGGGATGACGAAGAAGAAACAGGAGACTGgggTAAGCAAATGG
CGAAGAGATATTATGACAAGCTATTCAAAGAATACTGCATTTGCGACTTG
AGTTGTTATAAAGAAAACAAGTTTGCAATGCGATGGAGAGTCGAGAAGGA
AGTAACGAGTGGAAAAGGTGAGAGGTTTAAAGGGATAGATATTTTAATAA
TGTTGGGTTAAACCATGCTAACGAATGATTAAATGCTTTGTGATTACGTC
ATAAAAGCTG
Run BLAST on NCBI

protein sequence of TCONS_00070571-protein

>TCONS_00070571-protein ID=TCONS_00070571-protein|Name=TCONS_00070571-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MSGRRGGGYSSEFEEPSSSSGSKRKSSSWRNDSISEKVKIARVDHGASRP
ARSSYIEEYEKEERKSHFAKFLSLNAYQRHQKLVGDYLRYYGGKPEHFKR
DSSKDKTDYDVLRENHKFIWDDEEETGDWGKQMAKRYYDKLFKEYCICDL
SCYKENKFAMRWRVEKEVTSGKGERFKGIDILIMLG
Run BLAST on NCBI

transcript from alignment at scaffold_56:879130..882670-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070571 ID=TCONS_00070571|Name=TCONS_00070571|organism=Clytia hemisphaerica|type=transcript|length=3541bp|location=Sequence derived from alignment at scaffold_56:879130..882670- (Clytia hemisphaerica)
AAAGATTAATAACATATGAAAAATAAACAAATAAAGATGGAAGAAGAACA
ATGAGTGGCAGAAGAGGAGGAGGTTACAGTTCAGAGTTCGAAGAGCCTTC
TTCATCCTCTGGAAGTAAACGGAAAAGGTTCCGATTTCTTTTTCAAAAAT
GTACATCTATTTTGCACACAAATACTCTTTTGACCAATATTTCAGCATCG
GATTACACAGTTACAGGAATCACTACAAACAACACAATAACATCTGAAAT
GTTTTAAGATTGCAAGAAAGGAATCTCTCTAATTACTTTCTAACTTGAAC
TATCATGATGCCTCTGTATCAAATAGTTTATTTTGTTGAGTTAATTTCAT
GGTTCGTCCTTTGCTTTCTCCTTTAGTTCATCATGGCGGAATGATTCAAT
CAGTGAAAAAGTGAAGATTGCCAGAGTTGACCATGGTGCATCAAGACCTG
CAAGATCAAGTTATATTGAAGAATATGAAAAGTTTGTATTCAAAATTTTA
TGACTCTAAAGGCCGGTATCCACTTTCGCGCGAAATGGGCGAAATGGGCG
AAACCTTTTTTGCCTAAAGAAACGATTACATCATAAAATGTTTTCGCGCG
AACAAAAAAAAAGTTGAAGGAAGTTCACTGTCTTTGTTGAAACTTATCAA
CACTGATATTCACAATTTCATGACTCTAATTTGTTTTTCTGTTAAATGTT
TATTGTGATTTTTCCTGATTTGAACTTGTGACTCCAATTGCTTGTTTACA
AATTCTATCCTCCTTTGTGTTGCCAGCTATCTTGACAAATCTTGGCCGAA
GATCTCCAAAACTTGATAGCCAATCATCACTTCTAAGTAGCATGCCTGGT
TTTAGCCATTCCCATTAAATGTGCATTGTGTTGTTCCTTTTTCAGAGAAG
AACGGAAAAGCCATTTCGCCAAATTCTTATCTTTGAATGCAGTAAGTAAA
TTCTGCTTTGTGTCCTGATTTAAAATGACATTCAACTACAGTACTTCCAG
AAATGAAGAGAAGGATCTTTTAGGTTTTCTTGGTCATACTTGTGTAGTGG
CTTTTTTCAATGCATGTTTCAAATGAAGACTTTTTGGCTTTACTACAATC
ATGGTTGAAATATATTGAGAATTCCGGTTATTTTAACGTTTTTCAAGATT
TAAAGTTCCGGCGGGAAAGTCTATTTCGGGCTATCTCTTTGATTTAATCG
AATATTTTAATTTGGGAGGGGTTGGCAGACTTACAGGCTATATTCTGGGC
CTTATTGGACTATTTTTGAACTTTTGAATCCTCATATCCTAAGGTCCTAA
CTCTAGCGTTAAAACTCAGAGCTAAAACTCTACACTTCTAACCTACTTTA
GAGCACTTTACAAATCGATTGTGGTTACAAAACTTCCTGGGGAATTTACC
TTTTTTCTCAGATATTATTGATTGTAACTGGTATTAGAGGCAAGGTTTTA
CTTTTCGCACTTAATGTTTTCCTGTACTTCCTCTTTCTTTACATATTCTT
GTAAATTTTGTGCTTGTTTTTTTTTTCTTATTCCAGTATCAACGTCATCA
GAAGTTGGTCGGAGATTACCTTCGTTACTATGGAGGGAAACCGGAACATT
TTAAAAGAGACAGGTTATTTATTCATTATATGTACCATTACAATGTNACT
ATGGAGGGAAGCCGGAACATTTTAAAAGAGACAGGTTATTTATTCATTAT
ATGTATACCATTACAATGTTTTCTGACATTTCATCACGGACCCAATGAAA
TAGCTGATTGGTTTTAAGTGACGTAAAATCAGTCAATACGTCTCTTTCAA
CCAATCATCTTTTGGGTCCGTGGAAGACATTGCAATGGTGCATATCATGA
ATTACCTTTACCATTTTTCGTTTGAACTCACTTTCATTGTTCTCTTTTCT
TCATTTCCATTTCTATCTTCTAGGGCATTGCTCATTATTCATGATATTCA
CGACGTAATCTTTTCTACGGAAACACCCTGATTTTTGCCAGTAGTGGAAA
TTTAAAAACCATTTTTCTCCAGCTTGAATTTGCCACTGCTTGCAAAATCA
GGGTGTTTCCGCAGAAAACATTACATCATAAAATGCAACTTTCAGTTTTA
TCAAGAAGCTTAATTAAAAGTTTCTTGGTTATATCATCCTTGAAAAAGCC
AACCGTCATAATGATGACACCCTCTCACTGTTAACTTCTCAATATCTTTC
CAGTTCAAAAGACAAAACAGATTATGATGTGCTACGAGAAAACCACAAGT
AAGTCTATACAACGAAAACTTTTCTTGGAAGGATTGGGGCCCACTTTTTT
GGTTATGAAAATTGACTTTCCTTTCCGTTTCGTAGACTAGAATAGTATTC
ATTTTAATCAAACAATTTCTCTTTGTTTATTGCAGTATTATAGTATTGTA
ACTTTTCATTTTTCTGTACAGATTTATTTGGGATGACGAAGAAGAAACAG
GAGACTGGTAACTAATTTAACTCTTTGGTTAAATGATTGAGGGGCTGTGT
ATACAAACGAAGCGTAAAAGGGAAGGNCCTTAAATGATTGAGAGACTGTG
CATACAAACAAAGTGTAAAAGGGGAAATGGTTTGATAGTCAGGCTTTGAC
GAGAGGAAGAACCTATGACATGGGACCAAAATGCCAAATAAAGATATTCT
ATACATACTATACCATGCCATGTGAGGGGAATTGGGTACCATTACTCTGA
TACAAGAGTGTGGGTAGATTAGACAGACATTGTGACGTGCCGTGGCACTC
ATAAGGTTCGGCCTCGCGTGAGCATCGCTCTCCCAGTGTCGTTCGAGTGT
CATGGTATACGCCATGGCTTGGCAGCTCGCCGACTTTCATCATCAAATTC
ATTGATAGCAATTCCCACCATCAAGCATGATTCGATCGTCAATAAAACTG
ATTTCTGCAACCGGAACTTTCTATATCTTTTTTCCCTTCTCCCTTCCCTC
TCCCCATCAACAATCAATGATGAAATTTAACGCGTTATGCCTTTTCGCTA
AACATTATATTTTCTAACGGATTGTTTCCGTTTTTCTCCTTATTGCTATC
TAACTTTCATCATCAGGTAGGTCCATTCAGCAACTAGCTTGTTTGTCTTT
TTTTGTGCTCCATTTTTTTATTTTGTAATTTATAAGTAAAACTGCTAGAT
ATCGGTCACGAAAATCTTGAGTGTTTTTATTTTATTTTTAAGGGGTAAGC
AAATGGCGAAGAGATATTATGACAAGCTATTCAAAGAATACTGCATTTGC
GACTTGAGTTGTTATAAAGAAAACAAGGTACCGTTGTTAAAAACACTATT
TGGTTTTAATGAAAAAGGAGTTATCTATAGTATCTGAAAAATTGATACAC
CTTTTTGAGACGATTCCAAAACTTAAGCTTTAACTTTCTTTTCTACGTTC
AGTTTGCAATGCGATGGAGAGTCGAGAAGGAAGTAACGAGTGGAAAAGGT
GAGAGGTTTAAAGGGATAGATATTTTAATAATGTTGGGTTAAACCATGCT
AACGAATGATTAAATGCTTTGTGATTACGTCATAAAAGCTG

Coding sequence (CDS) from alignment at scaffold_56:879130..882670-

>TCONS_00070571 ID=TCONS_00070571|Name=TCONS_00070571|organism=Clytia hemisphaerica|type=CDS|length=5049bp|location=Sequence derived from alignment at scaffold_56:879130..882670- (Clytia hemisphaerica)
TTTGCAATGCGATGGAGAGTCGAGAAGGAAGTAACGAGTGGAAAAGGTGA
GAGGTTTAAAGGGATAGATATTTTAATAATGTTGGGTTAAGGGTAAGCAA
ATGGCGAAGAGATATTATGACAAGCTATTCAAAGAATACTGCATTTGCGA
CTTGAGTTGTTATAAAGAAAACAAGATTTATTTGGGATGACGAAGAAGAA
ACAGGAGACTGTTCAAAAGACAAAACAGATTATGATGTGCTACGAGAAAA
CCACAAATTTTAAAAGAGACAGTATCAACGTCATCAGAAGTTGGTCGGAG
ATTACCTTCGTTACTATGGAGGGAAACCGGAACAGAAGAACGGAAAAGCC
ATTTCGCCAAATTCTTATCTTTGAATGCATTCATCATGGCGGAATGATTC
AATCAGTGAAAAAGTGAAGATTGCCAGAGTTGACCATGGTGCATCAAGAC
CTGCAAGATCAAGTTATATTGAAGAATATGAAAAATGAGTGGCAGAAGAG
GAGGAGGTTACAGTTCAGAGTTCGAAGAGCCTTCTTCATCCTCTGGAAGT
AAACGGAAAAGTTTGCAATGCGATGGAGAGTCGAGAAGGAAGTAACGAGT
GGAAAAGGTGAGAGGTTTAAAGGGATAGATATTTTAATAATGTTGGGTTA
AGGGTAAGCAAATGGCGAAGAGATATTATGACAAGCTATTCAAAGAATAC
TGCATTTGCGACTTGAGTTGTTATAAAGAAAACAAGATTTATTTGGGATG
ACGAAGAAGAAACAGGAGACTGTTCAAAAGACAAAACAGATTATGATGTG
CTACGAGAAAACCACAAATTTTAAAAGAGACAGTATCAACGTCATCAGAA
GTTGGTCGGAGATTACCTTCGTTACTATGGAGGGAAACCGGAACAGAAGA
ACGGAAAAGCCATTTCGCCAAATTCTTATCTTTGAATGCATTCATCATGG
CGGAATGATTCAATCAGTGAAAAAGTGAAGATTGCCAGAGTTGACCATGG
TGCATCAAGACCTGCAAGATCAAGTTATATTGAAGAATATGAAAAATGAG
TGGCAGAAGAGGAGGAGGTTACAGTTCAGAGTTCGAAGAGCCTTCTTCAT
CCTCTGGAAGTAAACGGAAAAGTTTGCAATGCGATGGAGAGTCGAGAAGG
AAGTAACGAGTGGAAAAGGTGAGAGGTTTAAAGGGATAGATATTTTAATA
ATGTTGGGTTAAGGGTAAGCAAATGGCGAAGAGATATTATGACAAGCTAT
TCAAAGAATACTGCATTTGCGACTTGAGTTGTTATAAAGAAAACAAGATT
TATTTGGGATGACGAAGAAGAAACAGGAGACTGTTCAAAAGACAAAACAG
ATTATGATGTGCTACGAGAAAACCACAAATTTTAAAAGAGACAGTATCAA
CGTCATCAGAAGTTGGTCGGAGATTACCTTCGTTACTATGGAGGGAAACC
GGAACAGAAGAACGGAAAAGCCATTTCGCCAAATTCTTATCTTTGAATGC
ATTCATCATGGCGGAATGATTCAATCAGTGAAAAAGTGAAGATTGCCAGA
GTTGACCATGGTGCATCAAGACCTGCAAGATCAAGTTATATTGAAGAATA
TGAAAAATGAGTGGCAGAAGAGGAGGAGGTTACAGTTCAGAGTTCGAAGA
GCCTTCTTCATCCTCTGGAAGTAAACGGAAAAGTTTGCAATGCGATGGAG
AGTCGAGAAGGAAGTAACGAGTGGAAAAGGTGAGAGGTTTAAAGGGATAG
ATATTTTAATAATGTTGGGTTAAGGGTAAGCAAATGGCGAAGAGATATTA
TGACAAGCTATTCAAAGAATACTGCATTTGCGACTTGAGTTGTTATAAAG
AAAACAAGATTTATTTGGGATGACGAAGAAGAAACAGGAGACTGTTCAAA
AGACAAAACAGATTATGATGTGCTACGAGAAAACCACAAATTTTAAAAGA
GACAGTATCAACGTCATCAGAAGTTGGTCGGAGATTACCTTCGTTACTAT
GGAGGGAAACCGGAACAGAAGAACGGAAAAGCCATTTCGCCAAATTCTTA
TCTTTGAATGCATTCATCATGGCGGAATGATTCAATCAGTGAAAAAGTGA
AGATTGCCAGAGTTGACCATGGTGCATCAAGACCTGCAAGATCAAGTTAT
ATTGAAGAATATGAAAAATGAGTGGCAGAAGAGGAGGAGGTTACAGTTCA
GAGTTCGAAGAGCCTTCTTCATCCTCTGGAAGTAAACGGAAAAGTTTGCA
ATGCGATGGAGAGTCGAGAAGGAAGTAACGAGTGGAAAAGGTGAGAGGTT
TAAAGGGATAGATATTTTAATAATGTTGGGTTAAGGGTAAGCAAATGGCG
AAGAGATATTATGACAAGCTATTCAAAGAATACTGCATTTGCGACTTGAG
TTGTTATAAAGAAAACAAGATTTATTTGGGATGACGAAGAAGAAACAGGA
GACTGTTCAAAAGACAAAACAGATTATGATGTGCTACGAGAAAACCACAA
ATTTTAAAAGAGACAGTATCAACGTCATCAGAAGTTGGTCGGAGATTACC
TTCGTTACTATGGAGGGAAACCGGAACAGAAGAACGGAAAAGCCATTTCG
CCAAATTCTTATCTTTGAATGCATTCATCATGGCGGAATGATTCAATCAG
TGAAAAAGTGAAGATTGCCAGAGTTGACCATGGTGCATCAAGACCTGCAA
GATCAAGTTATATTGAAGAATATGAAAAATGAGTGGCAGAAGAGGAGGAG
GTTACAGTTCAGAGTTCGAAGAGCCTTCTTCATCCTCTGGAAGTAAACGG
AAAAGTTTGCAATGCGATGGAGAGTCGAGAAGGAAGTAACGAGTGGAAAA
GGTGAGAGGTTTAAAGGGATAGATATTTTAATAATGTTGGGTTAAGGGTA
AGCAAATGGCGAAGAGATATTATGACAAGCTATTCAAAGAATACTGCATT
TGCGACTTGAGTTGTTATAAAGAAAACAAGATTTATTTGGGATGACGAAG
AAGAAACAGGAGACTGTTCAAAAGACAAAACAGATTATGATGTGCTACGA
GAAAACCACAAATTTTAAAAGAGACAGTATCAACGTCATCAGAAGTTGGT
CGGAGATTACCTTCGTTACTATGGAGGGAAACCGGAACAGAAGAACGGAA
AAGCCATTTCGCCAAATTCTTATCTTTGAATGCATTCATCATGGCGGAAT
GATTCAATCAGTGAAAAAGTGAAGATTGCCAGAGTTGACCATGGTGCATC
AAGACCTGCAAGATCAAGTTATATTGAAGAATATGAAAAATGAGTGGCAG
AAGAGGAGGAGGTTACAGTTCAGAGTTCGAAGAGCCTTCTTCATCCTCTG
GAAGTAAACGGAAAAGTTTGCAATGCGATGGAGAGTCGAGAAGGAAGTAA
CGAGTGGAAAAGGTGAGAGGTTTAAAGGGATAGATATTTTAATAATGTTG
GGTTAAGGGTAAGCAAATGGCGAAGAGATATTATGACAAGCTATTCAAAG
AATACTGCATTTGCGACTTGAGTTGTTATAAAGAAAACAAGATTTATTTG
GGATGACGAAGAAGAAACAGGAGACTGTTCAAAAGACAAAACAGATTATG
ATGTGCTACGAGAAAACCACAAATTTTAAAAGAGACAGTATCAACGTCAT
CAGAAGTTGGTCGGAGATTACCTTCGTTACTATGGAGGGAAACCGGAACA
GAAGAACGGAAAAGCCATTTCGCCAAATTCTTATCTTTGAATGCATTCAT
CATGGCGGAATGATTCAATCAGTGAAAAAGTGAAGATTGCCAGAGTTGAC
CATGGTGCATCAAGACCTGCAAGATCAAGTTATATTGAAGAATATGAAAA
ATGAGTGGCAGAAGAGGAGGAGGTTACAGTTCAGAGTTCGAAGAGCCTTC
TTCATCCTCTGGAAGTAAACGGAAAAGTTTGCAATGCGATGGAGAGTCGA
GAAGGAAGTAACGAGTGGAAAAGGTGAGAGGTTTAAAGGGATAGATATTT
TAATAATGTTGGGTTAAGGGTAAGCAAATGGCGAAGAGATATTATGACAA
GCTATTCAAAGAATACTGCATTTGCGACTTGAGTTGTTATAAAGAAAACA
AGATTTATTTGGGATGACGAAGAAGAAACAGGAGACTGTTCAAAAGACAA
AACAGATTATGATGTGCTACGAGAAAACCACAAATTTTAAAAGAGACAGT
ATCAACGTCATCAGAAGTTGGTCGGAGATTACCTTCGTTACTATGGAGGG
AAACCGGAACAGAAGAACGGAAAAGCCATTTCGCCAAATTCTTATCTTTG
AATGCATTCATCATGGCGGAATGATTCAATCAGTGAAAAAGTGAAGATTG
CCAGAGTTGACCATGGTGCATCAAGACCTGCAAGATCAAGTTATATTGAA
GAATATGAAAAATGAGTGGCAGAAGAGGAGGAGGTTACAGTTCAGAGTTC
GAAGAGCCTTCTTCATCCTCTGGAAGTAAACGGAAAAGTTTGCAATGCGA
TGGAGAGTCGAGAAGGAAGTAACGAGTGGAAAAGGTGAGAGGTTTAAAGG
GATAGATATTTTAATAATGTTGGGTTAAGGGTAAGCAAATGGCGAAGAGA
TATTATGACAAGCTATTCAAAGAATACTGCATTTGCGACTTGAGTTGTTA
TAAAGAAAACAAGATTTATTTGGGATGACGAAGAAGAAACAGGAGACTGT
TCAAAAGACAAAACAGATTATGATGTGCTACGAGAAAACCACAAATTTTA
AAAGAGACAGTATCAACGTCATCAGAAGTTGGTCGGAGATTACCTTCGTT
ACTATGGAGGGAAACCGGAACAGAAGAACGGAAAAGCCATTTCGCCAAAT
TCTTATCTTTGAATGCATTCATCATGGCGGAATGATTCAATCAGTGAAAA
AGTGAAGATTGCCAGAGTTGACCATGGTGCATCAAGACCTGCAAGATCAA
GTTATATTGAAGAATATGAAAAATGAGTGGCAGAAGAGGAGGAGGTTACA
GTTCAGAGTTCGAAGAGCCTTCTTCATCCTCTGGAAGTAAACGGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043915XLOC_043915Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070571-exon-scaffold_56-1575043694:882544..882670TCONS_00070571-exon-scaffold_56-1575043694:882544..882670Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:882190..882294TCONS_00070571-exon-scaffold_56-1575043694:882190..882294Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:881730..881775TCONS_00070571-exon-scaffold_56-1575043694:881730..881775Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:881074..881134TCONS_00070571-exon-scaffold_56-1575043694:881074..881134Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:880987..881002TCONS_00070571-exon-scaffold_56-1575043694:880987..881002Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:880423..880467TCONS_00070571-exon-scaffold_56-1575043694:880423..880467Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:880214..880249TCONS_00070571-exon-scaffold_56-1575043694:880214..880249Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:879394..879478TCONS_00070571-exon-scaffold_56-1575043694:879394..879478Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1575043694:879130..879268TCONS_00070571-exon-scaffold_56-1575043694:879130..879268Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:882544..882670TCONS_00070571-exon-scaffold_56-1510915933:882544..882670Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:882190..882294TCONS_00070571-exon-scaffold_56-1510915933:882190..882294Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:881730..881775TCONS_00070571-exon-scaffold_56-1510915933:881730..881775Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:881074..881134TCONS_00070571-exon-scaffold_56-1510915933:881074..881134Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:880987..881002TCONS_00070571-exon-scaffold_56-1510915933:880987..881002Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:880423..880467TCONS_00070571-exon-scaffold_56-1510915933:880423..880467Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:880214..880249TCONS_00070571-exon-scaffold_56-1510915933:880214..880249Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:879394..879478TCONS_00070571-exon-scaffold_56-1510915933:879394..879478Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1510915933:879130..879268TCONS_00070571-exon-scaffold_56-1510915933:879130..879268Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:882544..882670TCONS_00070571-exon-scaffold_56-1491911889:882544..882670Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:882190..882294TCONS_00070571-exon-scaffold_56-1491911889:882190..882294Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:881730..881775TCONS_00070571-exon-scaffold_56-1491911889:881730..881775Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:881074..881134TCONS_00070571-exon-scaffold_56-1491911889:881074..881134Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:880987..881002TCONS_00070571-exon-scaffold_56-1491911889:880987..881002Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:880423..880467TCONS_00070571-exon-scaffold_56-1491911889:880423..880467Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:880214..880249TCONS_00070571-exon-scaffold_56-1491911889:880214..880249Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:879394..879478TCONS_00070571-exon-scaffold_56-1491911889:879394..879478Clytia hemisphaericaexon
TCONS_00070571-exon-scaffold_56-1491911889:879130..879268TCONS_00070571-exon-scaffold_56-1491911889:879130..879268Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070571-proteinTCONS_00070571-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:879130..882670 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.8406	27.7538	35.2828	19.4321	0	0	0	0	16.4552	4.13814	11.3676	9.75855	8.02723	0.0145545	14.486	6.95392	6.40854	12.0934	6.9072	11.6119	15.0137	9.63439	21.229	31.2067	0	0	1.88243	4.91163	21.013	11.9676
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019129Folate-sensitive_fs_Fra10Ac1
Blast
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BLAST of TCONS_00070571 vs. Swiss-Prot (Human)
Match: F10C1 (Protein FRA10AC1 OS=Homo sapiens GN=FRA10AC1 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 4.818e-42
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 3 
Query:  219 EEYEKEERKSHFAKFLSLNAYQRHQKLVGDYLRYYGGKPEHFKRDSSKDKTDYDVLRENHKFIWDDEEETG-DWGKQMAKRYYDKLFKEYCICDLSCYKENKFAMRWRVEKEVTSGKGERFKG 584
            E  ++EE ++     ++++AYQRH K V DY+ YYGGK E FKR    DKTD DV+RENH+F+W++E+E    W K++AK+YYDKLFKEYCI DLS YKENKF  RWRVEKEV SGKG+ F G
Sbjct:   54 ELLDREEARNRRFHLIAMDAYQRHTKFVNDYILYYGGKKEDFKRLGENDKTDLDVIRENHRFLWNEEDEMDMTWEKRLAKKYYDKLFKEYCIADLSKYKENKFGFRWRVEKEVISGKGQFFCG 176
The following BLAST results are available for this feature:
BLAST of TCONS_00070571 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F10C14.818e-4259.35Protein FRA10AC1 OS=Homo sapiens GN=FRA10AC1 PE=1 ... [more]
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