XLOC_043915 (gene) - C. hemisphaerica

Overview
NameXLOC_043915
Unique NameXLOC_043915
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:879130..882700-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043915 ID=XLOC_043915|Name=XLOC_043915|organism=Clytia hemisphaerica|type=gene|length=3571bp|location=Sequence derived from alignment at scaffold_56:879130..882700- (Clytia hemisphaerica)
ATTATTTTCTTAATTTATTGTTTCTTTTTTAAAGATTAATAACATATGAA
AAATAAACAAATAAAGATGGAAGAAGAACAATGAGTGGCAGAAGAGGAGG
AGGTTACAGTTCAGAGTTCGAAGAGCCTTCTTCATCCTCTGGAAGTAAAC
GGAAAAGGTTCCGATTTCTTTTTCAAAAATGTACATCTATTTTGCACACA
AATACTCTTTTGACCAATATTTCAGCATCGGATTACACAGTTACAGGAAT
CACTACAAACAACACAATAACATCTGAAATGTTTTAAGATTGCAAGAAAG
GAATCTCTCTAATTACTTTCTAACTTGAACTATCATGATGCCTCTGTATC
AAATAGTTTATTTTGTTGAGTTAATTTCATGGTTCGTCCTTTGCTTTCTC
CTTTAGTTCATCATGGCGGAATGATTCAATCAGTGAAAAAGTGAAGATTG
CCAGAGTTGACCATGGTGCATCAAGACCTGCAAGATCAAGTTATATTGAA
GAATATGAAAAGTTTGTATTCAAAATTTTATGACTCTAAAGGCCGGTATC
CACTTTCGCGCGAAATGGGCGAAATGGGCGAAACCTTTTTTGCCTAAAGA
AACGATTACATCATAAAATGTTTTCGCGCGAACAAAAAAAAAGTTGAAGG
AAGTTCACTGTCTTTGTTGAAACTTATCAACACTGATATTCACAATTTCA
TGACTCTAATTTGTTTTTCTGTTAAATGTTTATTGTGATTTTTCCTGATT
TGAACTTGTGACTCCAATTGCTTGTTTACAAATTCTATCCTCCTTTGTGT
TGCCAGCTATCTTGACAAATCTTGGCCGAAGATCTCCAAAACTTGATAGC
CAATCATCACTTCTAAGTAGCATGCCTGGTTTTAGCCATTCCCATTAAAT
GTGCATTGTGTTGTTCCTTTTTCAGAGAAGAACGGAAAAGCCATTTCGCC
AAATTCTTATCTTTGAATGCAGTAAGTAAATTCTGCTTTGTGTCCTGATT
TAAAATGACATTCAACTACAGTACTTCCAGAAATGAAGAGAAGGATCTTT
TAGGTTTTCTTGGTCATACTTGTGTAGTGGCTTTTTTCAATGCATGTTTC
AAATGAAGACTTTTTGGCTTTACTACAATCATGGTTGAAATATATTGAGA
ATTCCGGTTATTTTAACGTTTTTCAAGATTTAAAGTTCCGGCGGGAAAGT
CTATTTCGGGCTATCTCTTTGATTTAATCGAATATTTTAATTTGGGAGGG
GTTGGCAGACTTACAGGCTATATTCTGGGCCTTATTGGACTATTTTTGAA
CTTTTGAATCCTCATATCCTAAGGTCCTAACTCTAGCGTTAAAACTCAGA
GCTAAAACTCTACACTTCTAACCTACTTTAGAGCACTTTACAAATCGATT
GTGGTTACAAAACTTCCTGGGGAATTTACCTTTTTTCTCAGATATTATTG
ATTGTAACTGGTATTAGAGGCAAGGTTTTACTTTTCGCACTTAATGTTTT
CCTGTACTTCCTCTTTCTTTACATATTCTTGTAAATTTTGTGCTTGTTTT
TTTTTTCTTATTCCAGTATCAACGTCATCAGAAGTTGGTCGGAGATTACC
TTCGTTACTATGGAGGGAAACCGGAACATTTTAAAAGAGACAGGTTATTT
ATTCATTATATGTACCATTACAATGTNACTATGGAGGGAAGCCGGAACAT
TTTAAAAGAGACAGGTTATTTATTCATTATATGTATACCATTACAATGTT
TTCTGACATTTCATCACGGACCCAATGAAATAGCTGATTGGTTTTAAGTG
ACGTAAAATCAGTCAATACGTCTCTTTCAACCAATCATCTTTTGGGTCCG
TGGAAGACATTGCAATGGTGCATATCATGAATTACCTTTACCATTTTTCG
TTTGAACTCACTTTCATTGTTCTCTTTTCTTCATTTCCATTTCTATCTTC
TAGGGCATTGCTCATTATTCATGATATTCACGACGTAATCTTTTCTACGG
AAACACCCTGATTTTTGCCAGTAGTGGAAATTTAAAAACCATTTTTCTCC
AGCTTGAATTTGCCACTGCTTGCAAAATCAGGGTGTTTCCGCAGAAAACA
TTACATCATAAAATGCAACTTTCAGTTTTATCAAGAAGCTTAATTAAAAG
TTTCTTGGTTATATCATCCTTGAAAAAGCCAACCGTCATAATGATGACAC
CCTCTCACTGTTAACTTCTCAATATCTTTCCAGTTCAAAAGACAAAACAG
ATTATGATGTGCTACGAGAAAACCACAAGTAAGTCTATACAACGAAAACT
TTTCTTGGAAGGATTGGGGCCCACTTTTTTGGTTATGAAAATTGACTTTC
CTTTCCGTTTCGTAGACTAGAATAGTATTCATTTTAATCAAACAATTTCT
CTTTGTTTATTGCAGTATTATAGTATTGTAACTTTTCATTTTTCTGTACA
GATTTATTTGGGATGACGAAGAAGAAACAGGAGACTGGTAACTAATTTAA
CTCTTTGGTTAAATGATTGAGGGGCTGTGTATACAAACGAAGCGTAAAAG
GGAAGGNCCTTAAATGATTGAGAGACTGTGCATACAAACAAAGTGTAAAA
GGGGAAATGGTTTGATAGTCAGGCTTTGACGAGAGGAAGAACCTATGACA
TGGGACCAAAATGCCAAATAAAGATATTCTATACATACTATACCATGCCA
TGTGAGGGGAATTGGGTACCATTACTCTGATACAAGAGTGTGGGTAGATT
AGACAGACATTGTGACGTGCCGTGGCACTCATAAGGTTCGGCCTCGCGTG
AGCATCGCTCTCCCAGTGTCGTTCGAGTGTCATGGTATACGCCATGGCTT
GGCAGCTCGCCGACTTTCATCATCAAATTCATTGATAGCAATTCCCACCA
TCAAGCATGATTCGATCGTCAATAAAACTGATTTCTGCAACCGGAACTTT
CTATATCTTTTTTCCCTTCTCCCTTCCCTCTCCCCATCAACAATCAATGA
TGAAATTTAACGCGTTATGCCTTTTCGCTAAACATTATATTTTCTAACGG
ATTGTTTCCGTTTTTCTCCTTATTGCTATCTAACTTTCATCATCAGGTAG
GTCCATTCAGCAACTAGCTTGTTTGTCTTTTTTTGTGCTCCATTTTTTTA
TTTTGTAATTTATAAGTAAAACTGCTAGATATCGGTCACGAAAATCTTGA
GTGTTTTTATTTTATTTTTAAGGGGTAAGCAAATGGCGAAGAGATATTAT
GACAAGCTATTCAAAGAATACTGCATTTGCGACTTGAGTTGTTATAAAGA
AAACAAGGTACCGTTGTTAAAAACACTATTTGGTTTTAATGAAAAAGGAG
TTATCTATAGTATCTGAAAAATTGATACACCTTTTTGAGACGATTCCAAA
ACTTAAGCTTTAACTTTCTTTTCTACGTTCAGTTTGCAATGCGATGGAGA
GTCGAGAAGGAAGTAACGAGTGGAAAAGGTGAGAGGTTTAAAGGGATAGA
TATTTTAATAATGTTGGGTTAAACCATGCTAACGAATGATTAAATGCTTT
GTGATTACGTCATAAAAGCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070572TCONS_00070572Clytia hemisphaericatranscript
TCONS_00070571TCONS_00070571Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070571-proteinTCONS_00070571-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:879130..882700 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
73.87	69.27	70.1	58.73	31.63	26.41	36.41	40.57	39.38	26.36	24.55	27.09	21.4	17.53	28.59	27.13	45.47	44.85	21.99	23.45	35.59	31.38	46.99	47.23	25.82	25.66	26.21	22.22	34.14	30.69