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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070218 ID=TCONS_00070218|Name=TCONS_00070218|organism=Clytia hemisphaerica|type=transcript|length=2080bp
AAGACTATCACTCTATGATTCTTCTTGTTTTCGACCCTGCCTATCAGTAG
GTCTTGCATAAAAATTCAACTTCTTACTTATTTTTCACCTACGACCAGAT
CACAACCGTATTCATGCGGCTGATGTGTTGCACGGTGTCTATTACCTAAC
ACAACATCGTATCCCTGGATTCCAAAGCGATCTATCACGAAGACCTAGCC
TAACAAACACTGAACAGAAAGTGACGCCTTCATCATCACCTAAAGAGAAC
GAAATCGTCACtaagaaagaagagaaatttGGTTATGGATGTATTTGTGA
TTCGGTTCCTGATTTAGAGTTGATGGCGCTTTATGTGGCGGCAGCTATGC
ACGATTTTGATCACCCTGGACGAACGAATGCTTTCTTGGTTGCTACCCTC
AATTCcaagGCTTTGCTGTACAATGATCGCTCGGTGCTAGAAAGTCATCA
TGCAGCTGCATCTTGGTCGCTCCTTGTCACCAATCCAGGGTTGAATTTCT
TGTCCACGCTCGATTCTGCCGATTTCAAACGATTCAGATTCATAGTTATC
GAAGAAATTTTATCGACagatttgaaaaaacatttcGATTTCCTTACAGA
ATGGAACGCTAAGATCTCAGACCAGGGAGGCggtttgaatttctcgagtg
aAGCTGACCGCTTACTTCTCGGACAGATGGCCATTAAAATAGCGGACATT
TCAGGACCGAGCAAAGAATGGGACCTTCACTATAGATGGACTGAACGTAT
TATTGAAGAGTTCTACCAGCAGGGTGAAGACGAGATGACATTGGGAATGC
CAACGTCAGCATATATGGACCGCGGCAATCCGCAGGTGCCACAACTCCAG
GCCTCTTTCATCAAACATTTAGTGCAACCGCTATACATCGCCTACGAGAA
AGCCGGTATCCTGCCTGGTGAATGGGTCGAAATCGAGGATGGAGATGAGG
AAGAGGAAGATAGCGAGTCTGATGCTAGTGGCGAGGAAGGAGACCAGCCA
CCGAAGGAAAGCGACAAGACCAAGTCTACTATGAACGGGCCTACCTCCAC
ACAAGCTGGAGAAGCAGAGGAAGATTCTACCAAGGATGAATCAACAGAGG
AAACAGATTCTTCAACGGAAGATGCGGACGGTAACAAGAAAGCCATCTTT
TGCGTTATGTCGGATAACATCAAACGAAATTATGAGAAATGGTTGCGTAt
cattgaagaagaaaaagaagagaacGGCGAAAATGGAGAAGAAGAACCTG
AAAACGACGACACTTGATTTAATTCATTACGACCAGCGTGAGGAAGAAGC
GTTTTTACTCTTGTTGAGTATCAGTGCCATGCTTTGTATACAGGGATGAC
GTAAGATGAGTTTCCACGTGATATAGAAGAACTCTCTCTCTGTGCTCGCG
AAGAGTACTGTTATGGAGAGAACTTTTTCCACAAGTTGTAAAAGTGATCA
TGATGATGATTGTTTCTCATTGATTGAGCAACGATGTGTAACAACACTTT
TGCAAGCTTTCTGTTTATATATTATTGGCTTgttggaaaatgtttttagc
tTCTTGTATAAATTGACAGACAGATGCACCCACCCCttgaatatttatga
tgaacaCCAGCTTTTCTTCTCGACTACGACCACGTGCTGTCATTGATTGG
ATTGATCACGGCATTTAGTTCTTTATGTATTATCCTCTGCTACTGATGAC
GAAATTTGTGGCTCTTTTCCAGAACGTTTGTGAGCAGAAAACAGAAATTC
TTTACTGCTCATGTGTAGAAAGAGACTTTCAATTTTAGTCAAACCAGCAG
ATATTTTGACAGATTTACTATTTATGATCGTTGCTTCTTAGACTTCTTGT
ATGAAGTTCTTGGAAACAGTTTAAAGAAATATATATACAACTTCTATCTA
TTATATACTCAATCAAGAAACGCCTTCATATTTATGACTTTGTAATCAGA
AAGGCTATCTTTCCTCGTTGACACCGAATATGTCATGTCAGTTCAGCACA
AATTGACAGACTTTCTATATTGGCGTTTCTGGTTAGATTGAAATTGGGTT
TTGtatattgaaaaacaaaaagccTTAAGC Run BLAST on NCBI protein sequence of TCONS_00070218-protein >TCONS_00070218-protein ID=TCONS_00070218-protein|Name=TCONS_00070218-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MALYVAAAMHDFDHPGRTNAFLVATLNSKALLYNDRSVLESHHAAASWSL
LVTNPGLNFLSTLDSADFKRFRFIVIEEILSTDLKKHFDFLTEWNAKISD
QGGGLNFSSEADRLLLGQMAIKIADISGPSKEWDLHYRWTERIIEEFYQQ
GEDEMTLGMPTSAYMDRGNPQVPQLQASFIKHLVQPLYIAYEKAGILPGE
WVEIEDGDEEEEDSESDASGEEGDQPPKESDKTKSTMNGPTSTQAGEAEE
DSTKDESTEETDSSTEDADGNKKAIFCVMSDNIKRNYEKWLRIIEEEKEE
NGENGEEEPENDDT Run BLAST on NCBI transcript from alignment at scaffold_516:286523..291031+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070218 ID=TCONS_00070218|Name=TCONS_00070218|organism=Clytia hemisphaerica|type=transcript|length=4509bp|location=Sequence derived from alignment at scaffold_516:286523..291031+ (Clytia hemisphaerica)
AAGACTATCACTCTATGATTCTTCTTGTTTTCGACCCTGCCTATCAGTAG
GTCTTGCATAAAAATTCAACTTCTTACTTATTTTTCACCTACGACCAGAT
CACAACCGTATTCATGCGGCTGATGTGTTGCACGGTGTCTATTACCTAAC
ACAACATCGTATCCCTGGATTCCAAAGCGATCTATCACGAAGACCTAGCC
TAACAAACACTGAACAGAAAGTGACGCCTTCATCATCACCTAAAGAGAAC
GAAATCGTCACtaagaaagaagagaaatttGGTTATGGATGTATTTGTGA
TTCGGTTCCTGATTTAGAGTTGATGGCGCTTTATGTGGCGGCAGCTATGC
ACGATTTTGATCACCCTGGACGAACGAATGCTTTCTTGGTTGCTACCCTC
AATTCcaaggtttgtttttgtttttgtttttgttagaACGTCCTCTTTCA
CTTGTGACTCTCTCCTTGAGTTTCTTACAACTTGAGTTATCATACGGCGA
ACAAATCGAAAAATTACAGACTCCATAATAAAGTTTTTTCACATGGATGT
AAAAAACTTACTCGAAAGACCTTCGTTCGTCAATCTCTCTTTTGGGGATT
TTTctaggctgcgcgcatccccagaatttattttgttataggggatgcgt
atcgtgtatgaaattctcgtcagagagttacctcaaatttggggtaacca
gaatttgcataaatttacataatttcgtcacatccaatcaaagaaagaaa
aaaatcattgtgctgttgttttcataattatcaattttcattcactgaac
aaagaaaaaaagaagtcattgtattgctatgacgcataatcaaaaaagaa
aaaagaaaatacgggggtaagttgggacagaaatattttagacgatACAT
TTTCCCATTTTTATACCTTAAGCGCTATTTAAAAACCGATGCATTTTGAT
TCATGATCGGATATTTGCGCGATTATCTTTGATTTTCAGCAACTTCATAC
ATACCCGGCGGTATGAAGGCTCAAATGGGATAAAATTCACTAGGAATTGG
AGAAAAATTCCATTttctcaaaagtggggaggctgaagtctcccccgTCT
CCCCGCTTCCTTGGTTGctgaaacaaaaagaaatgaagaaattgTTCTCC
TTTTTATTGAATTAAGGCTGTGCAatgtagcgagcacctcactaaaaacc
gggattctTTCTTCTAATGGCGTAAAAAAACGCGCGGGTGACATCTAGTA
TAGACAATGAACGAATGAAAAAGTTTcatcttttcaaaactttttctcGC
CACGAAATTTCAGTTGGCATCCTAAGTGTCCTGTTTCTTAGTTTCCCACC
CACACATTTCGCTTTTAGACCGTTAAAAATACCATACTGGGGAGTTTCCA
TTTGTGGTACTCGAGTGTCTAAATATATTCCTTCGGTACAAAGTGAAATC
TTTATATGGAGCCAGAATAAATTTTCCGATGAAACTCTTTCTAAcagtat
tttgaatttgatctattttttctaaaaatagtcGATACTCCTCTCCTCAA
GCTTGCAACTGTTTCTTCCGAAATAATTTAAAGGAACAGCTATATAGAAG
ATAGTATAAAATAGCTAAGCTAAATCAGCTCGAGAAGGTTTTAGACgcat
ttgaaaatatattcataaaaaaagaatttaaaattttcatgatgACAATA
TTTTtacgatattcttaattttttggcaattttcatcatggacattctta
ttataaagtgtattcttataaaaaaagcgtgtagctaTCTCTAGGAGCAC
TGTGTGCGTTCAGCATCACATAACCGGCGTTTgtgacgacgggaaccgtc
tagtctAGACTTAATTGATTTTTCGAAATAAGTTTCCATGTCGACTTGCG
AGATGTAAAAACTTTCTTGAGGAAGACGCGAATCAGGGACGGGGGttttt
ttatgaccaaaaatgTGGCGCAATAGGAAAAACTGGAGAGGAAAATATTG
ACAACTGTAGTAAATAGCTAATTTTAGTGAGATTCCGAGCTTTAAAATGT
AGTACAAAAACGCTCATAATTAAAACACAGAAAGAAAAACAGTAGTTTTA
AGACCAACTCCCTGTCATCCTCATTCCGATTTTAAATCAAATGAAGTAAA
ATTCTTTCTacatcggaaaaaatattgatatttagTCGGGAAGTGAATTA
TATGCATAAAATTATAAGCTTAGGCCAGTTCAATTGAGAAAAATCCTATA
AAAGTGCGAAATTAGGTTTCCACAGAGCAAACTGGTTCAGCCatctttca
aatgaaaatttcttccctagAATGGTATTCGCAGCTTGCGATATAATCTG
TGATGCCGTGCATCTGATTAATTTCTTTACAATTCTTTAGAGATGATGTT
TGATGTTCTTTATACATGATAAACGTTCACAATTAATAATCGTCAGGTAA
ACTTAAACTTACTCTCTGGACTCTTTTGCAGGCTTTGCTGTACAATGATC
GCTCGGTGCTAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTCCTTGTC
ACCAATCCAGGGTTGAATTTCTTGTCCACGCTCGATTCTGCCGATTTCAA
ACGATTCAGATTCATAGTTATCGAAGAAATTTTATCGACagatttgaaaa
aacatttcGATTTCCTTACAGAATGGAACGCTAAGGTATTAAAATGGATA
TTAATTATGATagtattacacgttttttatatttaaGTTCAACACTGGAG
AAGCTTATTCATACTCAAATCTCAAGCATTGTCTTACTAAATCCTTAACC
TCAGTTCATGGAATTTATATCATCAAAACTCGCAAGAACAAAAATGAGTT
AAGAAGAGTGCTTCTAATTATTCGGCCATTTTTGGAACTCAACAACGTCT
TCtacaaattcatttttgatcTTACTTTTATTTCTTATAGATCTCAGACC
AGGGAGGCggtttgaatttctcgagtgaAGCTGACCGCTTACTTCTCGGA
CAGATGGCCATTAAAATAGCGGACATTTCAGGACCGAGCAAAGAATGGGA
CCTTCACTATAGATGGACTGAACGTATTATTGAAGAGTTCTACCAGCAGG
TTTGTTAGAATAATCTTCTCATCTCGTCCTTTCACAATCGTTTTATTTAT
GAGAAGTTCTCTAAGAAACGAATTGACTTAATTCTTAAATATCGCTTTCA
GGGTGAAGACGAGATGACATTGGGAATGCCAACGTCAGCATATATGGACC
GCGGCAATCCGCAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTA
GTGCAACCGCTATACATCGCCTACGAGAAAGCCGGTATCCTGCCTGGTGA
ATGGGTCGAAATCGAGGATGGAGATGAGGAAGAGGAAGATAGCGAGTCTG
ATGCTAGTGGCGAGGAAGGAGACCAGCCACCGAAGGAAAGCGACAAGACC
AAGTCTACTATGAACGGGCCTACCTCCACACAAGCTGGAGAAGCAGAGGA
AGATTCTACCAAGGATGAATCAACAGAGGAAACAGATTCTTCAACGGAAG
ATGCGGACGGTAACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACATC
AAACGAAATTATGAGAAATGGTTGCGTAtcattgaagaagaaaaagaaga
gaacGGCGAAAATGGAGAAGAAGAACCTGAAAACGACGACACTTGATTTA
ATTCATTACGACCAGCGTGAGGAAGAAGCGTTTTTACTCTTGTTGAGTAT
CAGTGCCATGCTTTGTATACAGGGATGACGTAAGATGAGTTTCCACGTGA
TATAGAAGAACTCTCTCTCTGTGCTCGCGAAGAGTACTGTTATGGAGAGA
ACTTTTTCCACAAGTTGTAAAAGTGATCATGATGATGATTGTTTCTCATT
GATTGAGCAACGATGTGTAACAACACTTTTGCAAGCTTTCTGTTTATATA
TTATTGGCTTgttggaaaatgtttttagctTCTTGTATAAATTGACAGAC
AGATGCACCCACCCCttgaatatttatgatgaacaCCAGCTTTTCTTCTC
GACTACGACCACGTGCTGTCATTGATTGGATTGATCACGGCATTTAGTTC
TTTATGTATTATCCTCTGCTACTGATGACGAAATTTGTGGCTCTTTTCCA
GAACGTTTGTGAGCAGAAAACAGAAATTCTTTACTGCTCATGTGTAGAAA
GAGACTTTCAATTTTAGTCAAACCAGCAGATATTTTGACAGATTTACTAT
TTATGATCGTTGCTTCTTAGACTTCTTGTATGAAGTTCTTGGAAACAGTT
TAAAGAAATATATATACAACTTCTATCTATTATATACTCAATCAAGAAAC
GCCTTCATATTTATGACTTTGTAATCAGAAAGGCTATCTTTCCTCGTTGA
CACCGAATATGTCATGTCAGTTCAGCACAAATTGACAGACTTTCTATATT
GGCGTTTCTGGTTAGATTGAAATTGGGTTTTGtatattgaaaaacaaaaa
gccTTAAGC Coding sequence (CDS) from alignment at scaffold_516:286523..291031+ >TCONS_00070218 ID=TCONS_00070218|Name=TCONS_00070218|organism=Clytia hemisphaerica|type=CDS|length=3780bp|location=Sequence derived from alignment at scaffold_516:286523..291031+ (Clytia hemisphaerica)
ATGGCGCTTTATGTGGCGGCAGCTATGCACGATTTTGATCACCCTGGACG
AACGAATGCTTTCTTGGTTGCTACCCTCAATTCcaagGCTTTGCTGTACA
ATGATCGCTCGGTGCTAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTC
CTTGTCACCAATCCAGGGTTGAATTTCTTGTCCACGCTCGATTCTGCCGA
TTTCAAACGATTCAGATTCATAGTTATCGAAGAAATTTTATCGACagatt
tgaaaaaacatttcGATTTCCTTACAGAATGGAACGCTAAGATCTCAGAC
CAGGGAGGCggtttgaatttctcgagtgaAGCTGACCGCTTACTTCTCGG
ACAGATGGCCATTAAAATAGCGGACATTTCAGGACCGAGCAAAGAATGGG
ACCTTCACTATAGATGGACTGAACGTATTATTGAAGAGTTCTACCAGCAG
GGTGAAGACGAGATGACATTGGGAATGCCAACGTCAGCATATATGGACCG
CGGCAATCCGCAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTAG
TGCAACCGCTATACATCGCCTACGAGAAAGCCGGTATCCTGCCTGGTGAA
TGGGTCGAAATCGAGGATGGAGATGAGGAAGAGGAAGATAGCGAGTCTGA
TGCTAGTGGCGAGGAAGGAGACCAGCCACCGAAGGAAAGCGACAAGACCA
AGTCTACTATGAACGGGCCTACCTCCACACAAGCTGGAGAAGCAGAGGAA
GATTCTACCAAGGATGAATCAACAGAGGAAACAGATTCTTCAACGGAAGA
TGCGGACGGTAACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACATCA
AACGAAATTATGAGAAATGGTTGCGTAtcattgaagaagaaaaagaagag
aacGGCGAAAATGGAGAAGAAGAACCTGAAAACGACGACACTTGAATGGC
GCTTTATGTGGCGGCAGCTATGCACGATTTTGATCACCCTGGACGAACGA
ATGCTTTCTTGGTTGCTACCCTCAATTCcaagGCTTTGCTGTACAATGAT
CGCTCGGTGCTAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTCCTTGT
CACCAATCCAGGGTTGAATTTCTTGTCCACGCTCGATTCTGCCGATTTCA
AACGATTCAGATTCATAGTTATCGAAGAAATTTTATCGACagatttgaaa
aaacatttcGATTTCCTTACAGAATGGAACGCTAAGATCTCAGACCAGGG
AGGCggtttgaatttctcgagtgaAGCTGACCGCTTACTTCTCGGACAGA
TGGCCATTAAAATAGCGGACATTTCAGGACCGAGCAAAGAATGGGACCTT
CACTATAGATGGACTGAACGTATTATTGAAGAGTTCTACCAGCAGGGTGA
AGACGAGATGACATTGGGAATGCCAACGTCAGCATATATGGACCGCGGCA
ATCCGCAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTAGTGCAA
CCGCTATACATCGCCTACGAGAAAGCCGGTATCCTGCCTGGTGAATGGGT
CGAAATCGAGGATGGAGATGAGGAAGAGGAAGATAGCGAGTCTGATGCTA
GTGGCGAGGAAGGAGACCAGCCACCGAAGGAAAGCGACAAGACCAAGTCT
ACTATGAACGGGCCTACCTCCACACAAGCTGGAGAAGCAGAGGAAGATTC
TACCAAGGATGAATCAACAGAGGAAACAGATTCTTCAACGGAAGATGCGG
ACGGTAACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACATCAAACGA
AATTATGAGAAATGGTTGCGTAtcattgaagaagaaaaagaagagaacGG
CGAAAATGGAGAAGAAGAACCTGAAAACGACGACACTTGAATGGCGCTTT
ATGTGGCGGCAGCTATGCACGATTTTGATCACCCTGGACGAACGAATGCT
TTCTTGGTTGCTACCCTCAATTCcaagGCTTTGCTGTACAATGATCGCTC
GGTGCTAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTCCTTGTCACCA
ATCCAGGGTTGAATTTCTTGTCCACGCTCGATTCTGCCGATTTCAAACGA
TTCAGATTCATAGTTATCGAAGAAATTTTATCGACagatttgaaaaaaca
tttcGATTTCCTTACAGAATGGAACGCTAAGATCTCAGACCAGGGAGGCg
gtttgaatttctcgagtgaAGCTGACCGCTTACTTCTCGGACAGATGGCC
ATTAAAATAGCGGACATTTCAGGACCGAGCAAAGAATGGGACCTTCACTA
TAGATGGACTGAACGTATTATTGAAGAGTTCTACCAGCAGGGTGAAGACG
AGATGACATTGGGAATGCCAACGTCAGCATATATGGACCGCGGCAATCCG
CAGGTGCCACAACTCCAGGCCTCTTTCATCAAACATTTAGTGCAACCGCT
ATACATCGCCTACGAGAAAGCCGGTATCCTGCCTGGTGAATGGGTCGAAA
TCGAGGATGGAGATGAGGAAGAGGAAGATAGCGAGTCTGATGCTAGTGGC
GAGGAAGGAGACCAGCCACCGAAGGAAAGCGACAAGACCAAGTCTACTAT
GAACGGGCCTACCTCCACACAAGCTGGAGAAGCAGAGGAAGATTCTACCA
AGGATGAATCAACAGAGGAAACAGATTCTTCAACGGAAGATGCGGACGGT
AACAAGAAAGCCATCTTTTGCGTTATGTCGGATAACATCAAACGAAATTA
TGAGAAATGGTTGCGTAtcattgaagaagaaaaagaagagaacGGCGAAA
ATGGAGAAGAAGAACCTGAAAACGACGACACTTGAATGGCGCTTTATGTG
GCGGCAGCTATGCACGATTTTGATCACCCTGGACGAACGAATGCTTTCTT
GGTTGCTACCCTCAATTCcaagGCTTTGCTGTACAATGATCGCTCGGTGC
TAGAAAGTCATCATGCAGCTGCATCTTGGTCGCTCCTTGTCACCAATCCA
GGGTTGAATTTCTTGTCCACGCTCGATTCTGCCGATTTCAAACGATTCAG
ATTCATAGTTATCGAAGAAATTTTATCGACagatttgaaaaaacatttcG
ATTTCCTTACAGAATGGAACGCTAAGATCTCAGACCAGGGAGGCggtttg
aatttctcgagtgaAGCTGACCGCTTACTTCTCGGACAGATGGCCATTAA
AATAGCGGACATTTCAGGACCGAGCAAAGAATGGGACCTTCACTATAGAT
GGACTGAACGTATTATTGAAGAGTTCTACCAGCAGGGTGAAGACGAGATG
ACATTGGGAATGCCAACGTCAGCATATATGGACCGCGGCAATCCGCAGGT
GCCACAACTCCAGGCCTCTTTCATCAAACATTTAGTGCAACCGCTATACA
TCGCCTACGAGAAAGCCGGTATCCTGCCTGGTGAATGGGTCGAAATCGAG
GATGGAGATGAGGAAGAGGAAGATAGCGAGTCTGATGCTAGTGGCGAGGA
AGGAGACCAGCCACCGAAGGAAAGCGACAAGACCAAGTCTACTATGAACG
GGCCTACCTCCACACAAGCTGGAGAAGCAGAGGAAGATTCTACCAAGGAT
GAATCAACAGAGGAAACAGATTCTTCAACGGAAGATGCGGACGGTAACAA
GAAAGCCATCTTTTGCGTTATGTCGGATAACATCAAACGAAATTATGAGA
AATGGTTGCGTAtcattgaagaagaaaaagaagagaacGGCGAAAATGGA
GAAGAAGAACCTGAAAACGACGACACTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070218-exon-scaffold_516-1491911889:286523..286931 | TCONS_00070218-exon-scaffold_516-1491911889:286523..286931 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1510915933:286523..286931 | TCONS_00070218-exon-scaffold_516-1510915933:286523..286931 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1575043694:286523..286931 | TCONS_00070218-exon-scaffold_516-1575043694:286523..286931 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1491911889:289004..289207 | TCONS_00070218-exon-scaffold_516-1491911889:289004..289207 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1510915933:289004..289207 | TCONS_00070218-exon-scaffold_516-1510915933:289004..289207 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1575043694:289004..289207 | TCONS_00070218-exon-scaffold_516-1575043694:289004..289207 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1491911889:289463..289621 | TCONS_00070218-exon-scaffold_516-1491911889:289463..289621 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1510915933:289463..289621 | TCONS_00070218-exon-scaffold_516-1510915933:289463..289621 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1575043694:289463..289621 | TCONS_00070218-exon-scaffold_516-1575043694:289463..289621 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1491911889:289724..291031 | TCONS_00070218-exon-scaffold_516-1491911889:289724..291031 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1510915933:289724..291031 | TCONS_00070218-exon-scaffold_516-1510915933:289724..291031 | Clytia hemisphaerica | exon |
| TCONS_00070218-exon-scaffold_516-1575043694:289724..291031 | TCONS_00070218-exon-scaffold_516-1575043694:289724..291031 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_516 | supercontig | scaffold_516:286523..291031 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008081 | phosphoric diester hydrolase activity |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007165 |
signal transduction |
| molecular_function |
GO:0004114 |
3',5'-cyclic-nucleotide phosphodiesterase activity |
| molecular_function |
GO:0008081 |
phosphoric diester hydrolase activity |
Blast
BLAST of TCONS_00070218 vs. Swiss-Prot (Human)
Match: PDE3B (cGMP-inhibited 3',5'-cyclic phosphodiesterase B OS=Homo sapiens GN=PDE3B PE=1 SV=2) HSP 1 Score: 313.153 bits (801), Expect = 2.251e-92 Identity = 152/281 (54.09%), Postives = 205/281 (72.95%), Query Frame = 2
Query: 95 PDHNRIHAADVLHGVYYLTQHRIPGFQS--DLSRRPSLTNTEQKVTPSSSPKENEIVTKKEEKFGYGCICDSVPDLELMALYVAAAMHDFDHPGRTNAFLVATLNSKALLYNDRSVLESHHAAASWSLLVTNPGLNFLSTLDSADFKRFRFIVIEEILSTDLKKHFDFLTEWNAKISD-QGGGLNFSSEADRLLLGQMAIKIADISGPSKEWDLHYRWTERIIEEFYQQGEDEMTLGMPTSAYMDRGNPQVPQLQASFIKHLVQPLYIAYEKAGILPGEWV 928
P HNRIHA DVLH V+YLT +PG Q + + T+++ ++ + ++ YGC+ ++P LELMALYVAAAMHD+DHPGRTNAFLVAT +A+LYNDRSVLE+HHAA++W+L ++ P NFL LD +FKRFRF+VIE IL+TDLKKHFDFL E+NAK +D G+ +S+E DRLL+ Q+ IK+ADI+GP+K DLH +WTE I+ EFY+QG++E LG+P S +MDR +PQ+ +LQ SFI H+V PL +Y+ AG+LPG+W+
Sbjct: 735 PYHNRIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISSKSCSNPDE-SYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKHFDFLAEFNAKANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGDEEANLGLPISPFMDRSSPQLAKLQESFITHIVGPLCNSYDAAGLLPGQWL 1014
The following BLAST results are available for this feature:
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