TCONS_00070218-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070218-protein
Unique NameTCONS_00070218-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070218-protein ID=TCONS_00070218-protein|Name=TCONS_00070218-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MALYVAAAMHDFDHPGRTNAFLVATLNSKALLYNDRSVLESHHAAASWSL
LVTNPGLNFLSTLDSADFKRFRFIVIEEILSTDLKKHFDFLTEWNAKISD
QGGGLNFSSEADRLLLGQMAIKIADISGPSKEWDLHYRWTERIIEEFYQQ
GEDEMTLGMPTSAYMDRGNPQVPQLQASFIKHLVQPLYIAYEKAGILPGE
WVEIEDGDEEEEDSESDASGEEGDQPPKESDKTKSTMNGPTSTQAGEAEE
DSTKDESTEETDSSTEDADGNKKAIFCVMSDNIKRNYEKWLRIIEEEKEE
NGENGEEEPENDDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043727XLOC_043727Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070218TCONS_00070218Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023088PDEase
IPR002073PDEase_catalytic_dom
IPR023174PDEase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008081phosphoric diester hydrolase activity
GO:00041143',5'-cyclic-nucleotide phosphodiesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity
molecular_function GO:0008081 phosphoric diester hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 280..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..275
NoneNo IPR availableCDDcd00077HDccoord: 2..148
e-value: 2.46299E-9
score: 53.1121
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 1..207
IPR0230883'5'-cyclic nucleotide phosphodiesterasePRINTSPR00387PDIESTERASE1coord: 121..134
score: 35.86
coord: 138..154
score: 46.0
coord: 37..53
score: 44.71
coord: 10..25
score: 48.88
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainGENE3D1.10.1300.10coord: 1..314
e-value: 3.0E-76
score: 256.0
IPR0020733'5'-cyclic nucleotide phosphodiesterase, catalytic domainPFAMPF00233PDEase_Icoord: 1..192
e-value: 7.5E-57
score: 192.7
IPR0231743'5'-cyclic nucleotide phosphodiesterase, conserved sitePROSITEPS00126PDEASE_Icoord: 10..21

Blast
[Close]
BLAST of TCONS_00070218-protein vs. Swiss-Prot (Human)
Match: PDE3B (cGMP-inhibited 3',5'-cyclic phosphodiesterase B OS=Homo sapiens GN=PDE3B PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 1.503e-90
Identity = 152/314 (48.41%), Postives = 208/314 (66.24%), Query Frame = 0 
Query:    1 MALYVAAAMHDFDHPGRTNAFLVATLNSKALLYNDRSVLESHHAAASWSLLVTNPGLNFLSTLDSADFKRFRFIVIEEILSTDLKKHFDFLTEWNAKISD-QGGGLNFSSEADRLLLGQMAIKIADISGPSKEWDLHYRWTERIIEEFYQQGEDEMTLGMPTSAYMDRGNPQVPQLQASFIKHLVQPLYIAYEKAGILPGEWVEIEDGDEEEEDSES--DASGEEGDQPPKESDKTKSTMNGPTSTQAGEAEEDSTKDESTEETDSSTEDADGNKKAIFCVMSDNIKRNYEKWLRIIEEEKEENGENGEEEPEN 311
            MALYVAAAMHD+DHPGRTNAFLVAT   +A+LYNDRSVLE+HHAA++W+L ++ P  NFL  LD  +FKRFRF+VIE IL+TDLKKHFDFL E+NAK +D    G+ +S+E DRLL+ Q+ IK+ADI+GP+K  DLH +WTE I+ EFY+QG++E  LG+P S +MDR +PQ+ +LQ SFI H+V PL  +Y+ AG+LPG+W+E     EE+ D+ES  D  GEE D                            T+DE  E   +       +++ IFC +  ++  N++ W  I+EEE++   +  + + EN
Sbjct:  812 MALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKHFDFLAEFNAKANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGDEEANLGLPISPFMDRSSPQLAKLQESFITHIVGPLCNSYDAAGLLPGQWLEA----EEDNDTESGDDEDGEELD----------------------------TEDEEMENNLNPKPPRRKSRRRIFCQLMHHLTENHKIWKEIVEEEEKCKADGNKLQVEN 1093
The following BLAST results are available for this feature:
BLAST of TCONS_00070218-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDE3B1.503e-9048.41cGMP-inhibited 3',5'-cyclic phosphodiesterase B OS... [more]
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