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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069759 ID=TCONS_00069759|Name=TCONS_00069759|organism=Clytia hemisphaerica|type=transcript|length=1609bp
GAATCCTTAGattttttcgtaaattttttattatttgcaTTGTTATTTTC
CTCTTACTTATATTccttacctcttttagtaaaaGTTGAATAAAATGGCT
GTCAACGTTTTCAACACTGGCGCAACATCTGACAATCTCAGTCGACATGA
AATGCTAACTTGGATCAATGACAGTTTACaatcaaattttacaaaaatag
aaCAAATGGCTTCAgGTGCTGCATATTGTCAATTTCTTGATATGCTGTTT
GAAAACTGTGTACCAATGAAGAAAGTCAAAGTTCAGGCTAAGTTAGAACA
TGAGTACATTGTCAATTGGAAACTGCTACAAAATGGCTTCAAAAAGGTTG
GCGTAGATAAGACTATACCAGTAGATAAATTGATCAAAGCACGATTCCAA
GACAATTTCGAATTTTGTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTA
CGCTGGACAAGAGTACGACGCATTGGCCATCCGTGGAGGTCTCCAACCCA
TTGCTGACGGAAAGAAACCTGCTGCAGCTGGCTCAAGAAGTATGGCAGCT
CCCTCAAAGTCAAGGGCCGCTCCACCCAAACGAACAGCCGCCCCTAAAGC
AGCCCCTGTATCAAAAGCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAAC
AAGAAATGGACACTGTAACTGCCGAACTCTCAGAAATGAAGACTAGCGTG
GACGGATTGGAAAAAGAGCGAGATTTTTATTTCGGCAAATTACGTGATAT
CGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGGAACACCCCTTAGTGAAA
AAGTACTGGCCATCTTATACGCAACTgagGATGGTTTCGCACCACCGGAA
GAAGAAGAAGGGGCAGAATATATCGATGGAGGTGAACCTGAAGAATTCTA
AATCGCATCCCTCGTTCGTACACATCACACACAAAAAAGTTGATCCGAAT
ATTATTTTATTGGTTTTCTAAAAGATTCCGGGTTCAACTAATTGTTGTTG
ACGTTAAAAGACATTTTGAAAACGTTCTGTCTTGGGGACTGTTGTTCAAC
ATGCATTAGTTGAACTGTGTGTGTGTTTCAAAGAAATGTACATATGTTGT
TTTACTGTTATGGTGACTTACATCAAACATTCATTCTGTTGAAGTATATG
CATccaagaaaaaaatgacaaaagaatttACGCCGGGATATACCGATACA
AAATAAAGTATAAAGCAAGAATAAATTAATTTAAAGGAAATGAACTTTTT
AAAGCAATATGACTATTATAGACCACTTTTTAggctcattttcaaatttc
tccgCCAACCTTTTCCTGTCTTGTGTATTCATTTCTATAGACAATTACTG
GGATAGATCTCCATACCACAACAGACACACTAGCTACACTTTTGTTTTAG
TGAAAGTAAAATAGCTCCTAAGGACGTTAGAATTTTCTAATCACGTtaca
tttgtttttgtttttatagttAGCCATATTTTACCTTATTGATAATTTCT
TAGGTcttttttgaaacaaatttcTGTATAATTATGTTGATAGCAGaata
tttaaaattgaaaacacGAAAAAATTGTGCATGTCtgagaagttcttttt
caaaccGAG Run BLAST on NCBI protein sequence of TCONS_00069759-protein >TCONS_00069759-protein ID=TCONS_00069759-protein|Name=TCONS_00069759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MAVNVFNTGATSDNLSRHEMLTWINDSLQSNFTKIEQMASGAAYCQFLDM
LFENCVPMKKVKVQAKLEHEYIVNWKLLQNGFKKVGVDKTIPVDKLIKAR
FQDNFEFCQWFKKFFDANYAGQEYDALAIRGGLQPIADGKKPAAAGSRSM
AAPSKSRAAPPKRTAAPKAAPVSKAPSSKGSGVSQQEMDTVTAELSEMKT
SVDGLEKERDFYFGKLRDIEVLCQEEGAVGTPLSEKVLAILYATEDGFAP
PEEEEGAEYIDGGEPEEF Run BLAST on NCBI transcript from alignment at scaffold_507:131262..141755+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069759 ID=TCONS_00069759|Name=TCONS_00069759|organism=Clytia hemisphaerica|type=transcript|length=10494bp|location=Sequence derived from alignment at scaffold_507:131262..141755+ (Clytia hemisphaerica)
GAATCCTTAGattttttcgtaaattttttattatttgcaTTGTTATTTTC
CTCTTACTTATATTccttacctcttttagtaaaaGTTGAATAAAATGGCT
GTCAACGTTTTCAACACTGGCGCAACATCTGACAATCTCAGTCGACATGA
AATGCTAACTTGGATCAATGACAGTTTACaatcaaattttacaaaaatag
aaCAAATGGCTTCAggtatacatttttttaaatcctgaAAATAGTCGTGT
TTCGCGgcattttaatttcgcggttttctgAACTCGACCGCGAAACCACG
AAATTTTCATGCAATGAAGTATTTTGACGGCCAGATGACTATTCTGACGA
CCAATTTTCCACCGGTCGGTGGACGACTATCCACCGATCGAATAACTATC
TAGATGGCCGAATTTCCCACAATTCTAACCCTCTTGGCGACCAGGGCTTG
GGTAGAATCACACAAATAAATCACTGTATTAATCGGATTAATGCACAGCA
GGGGAATAGGAATGGCCAAATACCATGTACCGTGGTTTTTCTAATCTAAC
GCGTAGTCTAATTATTAACGCGTagccaaaattctgcataattaatTTCA
CTCTAATTATTACGCGTGATCAAGccttggaaaagaaaaattagacagga
aagttttatttttgataaacttctttctttcaaaaacacaaattaAAGGG
ATCTTCGTCATCCTCCTCTGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTAATGCTTGTTAATACATTATACGATCTATATGTAAT
ATATATTACACAAGCCTTTAACGCGTACTTAAAACACTTGAATATCGTAA
TTAATTGTTCTCTTGTTTTTCACGCGTAGCgtcgaaaataattatttatt
gccacgcgttaaattagaaaaaacacGGTAGGGTTGCAATTTTTAGCGAA
TATAAAGAAATCAATATtaatcgataacaatcgaaAGCAATCAGCGATTA
ATCGATAGCaatcgataacaatcgaatCCAATCGATAAGAACGTAAAGTC
TTAGTATCGATTGgctatcgattatttatcgattatttatcgatcactat
cgattattatcgattaaaatcgattaatatcgattaatatcgattgATTT
CCCGTATCGATTTCATCGATTGGGTACGCGCCTggttcattgcgtcacag
caaaaagtttgtttttattttagtttgtatctttgaaataccccatcgga
tttaggaagggtgtcggatttaggacgaCTCACagtatttgtttcaatcc
gtgatcctaaggcttaatttttttttctcatcttcaatttactgaagaaa
gcatgaatttgatgcgagagttagattgtcaacaaagtgctgtaaaaaat
aattgaatgaaagaagaacttaagatcttaaatatttaaatttaaatgaa
GAATTGTTGCGAAAAAccaaaccggctgggaacagtagttttgccagaaa
agttttatttttgattggttcaatcgaaataggagatttggaaaaacttt
ttatgcttggttttttgcacaaacccctgtaactatgtgCAAGCACCCCA
TTGCTAAGATattgaaaccactgaaaatgaaagtaaaatcggcccgcaCT
CCAAGTCCagtaatcttgatataggagtttaagcaaAGACTGCCTGTACT
GTACGCAGCAGCAATAAAAATAATCATAACAATACTCAAAAAAATTACGT
TCCCGtcttttttactgttttttgcCTAGGCAAAATAGCATACATAGTAA
GTATATAAGCAGGCTatgcctttaattggctgtaaaaaattTTTGCAACT
GTAGAATTTGGTACAATTTTCAacaatatagaccttttttcaaagaggac
atcctgttgaataattatgtattccagtcataaaaacaatgataaagtcA
TGCATAatttactgtatcatgcatattgtaataattatgcatggttttat
cattgtttttctgctggactacataattattcaacagggtggcctctttg
aaaaaggtctattagggGCCACTCACATATCAATTTTCCCACACTTAAGC
ATCATTCATACGCTAATTAAAAAACCCACCCACCCCCCTACCCTTAGCAT
CATATTATGAAATAAACCGGAAATAGATGAAAACCCTTTTTCCTTTCTCA
CTTCAAGTATTGATGTTCAACTGCCAGAGAAGTTGCTTCCCCCTTCTGTC
TGTTTGGTACATTTCGCTCGCTTGTTTTTCTAATAGTGGTTTTGTTATAT
GACTTTTACACAGATTGGATCCCAGACCCACATTAGTTGTGATGCGGGAA
AAAAAGGCCCCAAACTTTTTTAACATAATGAGCGTCTCCGGCATTTTACT
ATACCAATTTATTCTCAATGCCGTGAAAAAGAGACAAATTTGAAGAAGTG
AGGATGTTTTGTTGAATCTTGAATATGAAGAGGCTGCTACCAGAAAAATA
ATAAGTATGAAAGTTAtagttttctggaaatttgaacaTCTCTTGGACCT
CGAAAATTGATATGTCTAGTAGATTTTCTTAGTGTCACTCTATCTAATCC
ACCCACCCTATAGCTTCGGAATGGCGCTAAGCGCGGTCAAAATCAATATG
TGAGTGCCCCTTTAGAACAattctatttttaaacaaaattaaccatcaaa
ttttttcatcttcctcCTTCATCTTCAATCAAGCACTCAAAATCTACTAA
AGCTGAgtacataagatattcttatgaTTATTGATATTTCCTGAAACACT
GTTTGTTGCGTGCTGCTATGGAGTGCATGACGCAACTCACATAACAACTA
ACGCATAGTGCGCAAGGAGGTTCCAGGTACCACCtaaaaattcaggtccc
acctaacCCTAAAATTCTCACCCTCAATCCAGACTACCAGATCCCAGCTG
AAAAATCCCCACACAAAATTATACTAAATTCAGCAACGAAACAAAAATTC
CTACTGTATAATGATAAAAAGGAGAAAGGTTTAGTATgtaaaagaattat
ttatagAATATGAAATATAGAAGAAATTATAATTGAattggaaataagaa
aaaactaacatACTTTTACCAAAACACCAGACTCCCATCTAAAGAAATTA
ATCCCCACCTTAAACTTATTTGTCCCacctaaaacctgaaaatttccaaa
tcccagctggaaatttttgacccagaACACCAAATCCCCCActatcttgg
ggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtttttgggggggggggtgcacactatgaaCTTACA
AAGTCCCCTTCTGTTGGATGATCATTTTGGGTGCCTCATcatggaagata
atttgttttgatgctccctggctttgggaagtagtgATGTTTATGGTTGT
TTTCAATGGGAAATAGCAAACTTGAGTTTACATgtatcatttagtttttg
cttttttgtgGATTTTCTGCTAATCCAACGGCAGCGCAGTTTGGTTACTT
TACAAATGTCACTCAAATGTTAATTGTGGCAATGTGTGTTGTCTATGCAT
TTGTTCGCCATTTTTGCCATCATGTCTTGGAAAAATAGTGTTAAGATCCC
AGAAATGTGCCAGGAAAGTTACAACAAATGAGACAATTTAATCCTTAAGT
CAAACTTTCAAAGTGGCAATTACAATGTTTATaactcatcaaaatttttc
tgaaagGGGTGATAAGTGTTGTCTCATCCTTTTCTCTAGTCTATCATTTT
GATAAACCTCAGTTGATTTAGATCactttgttgaatttttaaaagCCCTT
TTAACTatcttactcaaaatttattgtaGTAAATGATACCGTAAGATAAA
ATTCTAGTCCATTTGACAATGCATACTTCTAATTTAAAAAACCTGAACCC
TACTAcaggaccttgaaaaccttgaaaaccttgaaaatggaccactcaac
cttgaaaaccttgaaatccatcaattttctgggaaaacccttgaaaacct
tgagaaatcgctaaaaaccttgaaaagtagTTCTTCATATTCATTCTTTT
TGTCATACAAGCTTTTTAATAGGGCAGTGGCTGAGTCTAGGTTTTTCTCT
AGAATCGCAAATTGAGGTATCTCAATCCCTTTACAATGAActagtttttt
tcattttttctatcaATTGTCTGCTAGTAGTATCTTACCAGATCTTACAA
AACTTATCTGAGAGCAGGGGTCTTATTTTGGCCCGGTGAATGGCAAATTT
CGGCAGCCTAAAGACTCtaaacaaattaaattccctgGTCTTGGAAATCC
ATTTGCTGGCCgatgaaattttgctgctttctATCCAGTCAttcaaaaag
taagaataagtaCGTTCTTAAACTGTTTGTCATggggaaatttccaaaaa
ttgccTGCGACGCTAAACCTTTATAACATTTAGAGAATTCTATATTCACA
TGTTTCTGTTGTGATTCCATGTCTCAAGGAATGCAacatattcttttatc
attagctGAGTTTTTGAGCCCTAGGAAATTGGCTGTTCCCCAATTTTCTT
CAGGCCATTAATCATTCCATTCATATTATGTCACGTTACCCTATTTATGA
ACTGGATACCCCAGAGTATTCTGGTTGACGTCTTGGAACAATGGCCGTTC
ATCCTTAAAATTTCGAGCATCGAAAATAATTTCCTTAAAACAACACTTCT
GCCTTTTGAAAGagtcttaaaaatcaaaattttctcttgtTAGCGCAAAC
CATGGTCACTGTAAACATTTGGCTTTTActtctaattctttatttcgACA
GTTGAAAGACTAGGTAGCCGGAGTTAAAATGTGGTATATATCGTTCTCGA
GAGGGAGATAGGAATTTTACTGTGGAAATAATTCGCCGGCTGCCAAAAgc
caataaattttatttgccgtcctctatttttctttcgcCTAGTaccactc
tgaaaaaaaaaccaaaacctgTTGAGAGCCATGTCAACTGAGTatcaaaa
aaaccttgaaatatGCCAAATCCTTTgccaaaaaccttgaaaaaccactt
aaaaatgaccaaaaaaaccttgaaaaccttgaaaatcctgaaaaaaaatt
tgtagacACCCTGCAGCAATCTTGATTTATTTTACCACTAACAGAAAAAG
CTCCCACCCCCTCCCTAGTACGAAAAGGGTGGACAGAATTCTCTCCTTTT
GAGATATGAATATATACATTCAACTTCCCAGCaagaagaatttaaaaaaa
cattttaacgaCCTCCATTCAGACTCACAAAGCCTAGTTGCAACACAGAT
ATAAAATATTGACTAgctctttcaaaaaaattgactagctctttcaaaaa
aattgtcaaaaaatttgaaattcattaaCATTGAGTCAAATAGAAGACTT
TTTGCTAAACAGGATACTGCATTTTTAGTGCTTCTCGTGTCATATATCGA
GGCGCATATTTCCAGGGGTTTTCTGCTATCAGTTAATGATAGTAGAAACT
CCATCTTAAATTTAGTTTTGAAACTCCTTgataaaaaatatcttttttga
aaaagttttgtaaTCTTGCAAACACTAGGTATTTCTCGTTTGCTCTATTT
GAGTTGTTTTGCTTGATGATTTTTTAACATTTGAGTAGTCTTGTTATATT
TTCTTAGGTAAAAATGTCTTGAGTATACAATATTCTTTCTTAACAAAAGC
AAAACTCTCACCACAAGGGGTCTATCATGCACCCACAGTTAGTGCATTTA
GTAGATTAGATGAATTGTGAAACCTTTTGTTTTTGTCTTCTAACTGAACC
TGAAGGGCTTTGTAAACAAGATTGTTTGGATAtcctgtttaaaatttttc
atttctgaTTTCCTCTTTAGGTGCTGCATATTGTCAATTTCTTGATATGC
TGTTTGAAAGTGAGTCaagtttttattggattttatGATTTGACTGGTTA
TGGATGCATTGTGTTCTGCAGGTTTTTAATGTCCCCTATCTGGGTCCCGA
ATCCCCCATTTGTATTTCTCTTCTCCCTGACCCACCCTTTTCTTCGATTC
CCACACTTGAAGAACTGTCAAGAACAATAAATTTACATCCTCTTTTATAA
CTTAGCAATCGAGTAATATTTCCCTGCAGCAAACATACAAATATATAAAC
ATTTCTGCACTCAGCTGCACTTCACATAAGATGTTTTTGAAATCTCCATT
GGGCTTAGCCCTCCCCATCGAGATAGAAATATTCAATTACCCCTCCTAGA
CAGAAGAGGATCCCATGGCTTTCCTAGTCATATCTATTAATTTCCTTTTC
AGACTGTGTACCAATGAAGAAAGTCAAAGTTCAGGCTAAGTTAGAACATG
AGTACATTGTCAATTGGAAACTGCTACAAAATGGCTTCAAAAAGGTTGGC
GTAGATAAGGTAAGTGGTGGAATGTTTACTTTGAAGCTTATTTCTCTACA
GAGTTTAGGGGTtgacaaatttgattttgatggaCATACAATTGTTGCAC
TTTTACCAATCCTTCTTTTTGGGTATATTTTGATGAGgtagtattatttt
ttgttatcaGGTTTTCTCCTATAATTATTCCACCGTTTTTATCGTGTTAT
TTCCGTTTCCCATAGGTTACCTCATCTTGTTTTGACTTTTCGTTTAGACT
ATACCAGTAGATAAATTGATCAAAGCACGATTCCAAGACAATTTCGAATT
TTGTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTACGCTGGACAAGAGT
ACGACGCATTGGCCATCCGTGGAGGTCTCCAACCCATTGCTGACGGAAAG
AAACCTGCTGCAGCTGGCTCAAGAAGTATGGCAGCTCCCTCAAAGTCAAG
GGCCGCTCCACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCTGTATCAA
AAGCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAATGGACACT
GTAACTGCCGAAGTAAGTTGTACTTGGTTGACTGCCAACAGAAAGAAACT
CTCTATAGTAGGGggggaatttgtaaaatcgctcgacttttttagtcaaa
gcacttatACATTATTGGAAAGGTAAGATGTAGGGGAATCAAAATAACAT
AGGTTCCAATTTTTTTTCGTACACTTTGGTGTGTTTTTCAGATAAATATG
ACGGTCTCAGGCAAAAGTCATAGGGTCAAAATTTAATGAAAATTTTAGCT
TCAGAAAAGAGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAATAGT
GTGTTTTTTTTTCAACCAGAAATAGCTTTTTTGTCCACTTTTTGCACTTT
TTGAAGCTCAATGTCTCGAGTTAGGTAGAGAAATCATATATACTCGCAAT
ATATCTCTAATCTTAATTTTTTAAGAGCTTTCCAAAAATATACAACATGT
TTCTCTTTTCTCAAGCTCAAAGCAAGACACCAAAGTGTCTGAAAAAAATT
GGCACCTTTTATATGTCATTTTGATTCCCCTACCCCTTAGACTTCCAAAA
ATGTATAACAAGTGCTTTGACTAAAAAAGTCGAGTGACCTCCAAAAATCG
AACAAATTCCCCCCTACTACTATGTTATTTGGGTAAACTGGATCGAAACA
AAGCAAAGTTTTCTGTCATCATTCTTCAGAAATGTCAAAAAGAATTTAAG
TCGATTACGACAAAAACGAAACTGTTCTGTTTGAAGTATAAAAGTAACGT
GAATATCGATATTCAGTTTTTTCATTACTTTCTAGCTCTCAGAAATGAAG
ACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTCGGCAAATT
ACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGGAACACCCC
TTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgaggtatttttttct
tttgataaattGAAGGAATTGACTCCCCCGTCTTCATTGTCATGNAGAAA
TGGACACTGTAACTGCCGAAGTAAGTTGTACTTGGTTGACTGCCAACAGA
AAGAAACTCTCTATAGTAGGGggggaatttgtaaaatcgctcgacttttt
tagtcaaagcacttatACATTATTGGAAAGGTAAGatgtaggggaatcaa
aataacataggttccaattttttttcgtacactttggtgtgtttttcaga
taaatatgacggtctcaggcaaaagtcatagggtcaaaatttaatgaaaa
ttttagcttcagaaaagagagacctgttgtatatttttggaaagctctca
aaaatagtgtgtttttttttcaaccagaaatagcttttttgtccactttt
tgcactttttgaagctcaatgtCTCGAGTTAGGTAGAGAAATCAtatata
ctcgcaatatatctctaatcttaattttttaagagctttccaaaaatata
caacatgtTTCTCTTTTCTCAAGCTCAAAGCAAGACACCaaagtgtctga
aaaaaattggcaccttttatatgtcattttgattcccctaccccttagac
ttccaaaaatgtataacaagtgctttgactaaaaaagtcgagtgACCTCC
AAAAATCGAACAAATTCCCCCCTACTACTATGTTATTTGGGTAAACTGGA
TCGAAACAAAGCAAAGTTTTCTGTCATCATTCTTCAGAAATGTCAAAAAG
AATTTAAGTCGATTACGACAAAAACGAAACTGTTCTGTTTGAAGTATAAA
AGTAACGTGAATATCGATATTCAGTTTTTTCATTACTTTCTAGCTCTCAG
AAATGAAGACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTC
GGCAAATTACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGG
AACACCCCTTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgaggtat
ttttttcttttgataaattGAAGGAATTGACTCCCCCGTCTTCATTGTCA
TGTTACTTTTGATTgacttttctttcatttcgcggaAATTAAAGTAGCGC
TGTGTCAATTATTCGAATCGACTATTTTGATCGTAAAGCACGTGCACACT
CAGGAAAATGGTTTTTTAAAGCACGATAATGAAGGAATTAGATAATCACG
TATCCGTTTCCATTTGTCGGACGTTTTGTTGTCCTCTCATGCTATCGTCT
CATATCCGATtaataaaccttactccataactcgaagttTCCTTGATTCG
AGCAGTTTTGTGTTCCTCGTGGGTGCCCGAGTTATGGAAACTCGACTGAG
AAAGATAAAGgtcttagaaaaaaataaatgcgAAGTTTATTATATCGGCC
GTTCAAATTTAGTAACCTCACTAGTTTTGTAGCTAGATGGACTCGAACGT
TACAAAAGTCAGCGTAGTTTAGAATGCAATTTCCCTTCGTCAAATACTTC
TTTGAACATTTTAGGATGGTTTCGCACCACCGGAAGAAGAAGAAGGGGCA
GAATATATCGATGGAGGTGAACCTGAAGAATTCTAAATCGCATCCCTCGT
TCGTACACATCACACACAAAAAAGTTGATCCGAATATTATTTTATTGGTT
TTCTAAAAGATTCCGGGTTCAACTAATTGTTGTTGACGTTAAAAGACATT
TTGAAAACGTTCTGTCTTGGGGACTGTTGTTCAACATGCATTAGTTGAAC
TGTGTGTGTGTTTCAAAGAAATGTACATATGTTGTTTTACTGTTATGGTG
ACTTACATCAAACATTCATTCTGTTGAAGTATATGCATccaagaaaaaaa
tgacaaaagaatttACGCCGGGATATACCGATACAAAATAAAGTATAAAG
CAAGAATAAATTAATTTAAAGGAAATGAACTTTTTAAAGCAATATGACTA
TTATAGACCACTTTTTAggctcattttcaaatttctccgCCAACCTTTTC
CTGTCTTGTGTATTCATTTCTATAGACAATTACTGGGATAGATCTCCATA
CCACAACAGACACACTAGCTACACTTTTGTTTTAGTGAAAGTAAAATAGC
TCCTAAGGACGTTAGAATTTTCTAATCACGTtacatttgtttttgttttt
atagttAGCCATATTTTACCTTATTGATAATTTCTTAGGTcttttttgaa
acaaatttcTGTATAATTATGTTGATAGCAGaatatttaaaattgaaaac
acGAAAAAATTGTGCATGTCtgagaagttctttttcaaaccGAG Coding sequence (CDS) from alignment at scaffold_507:131262..141755+ >TCONS_00069759 ID=TCONS_00069759|Name=TCONS_00069759|organism=Clytia hemisphaerica|type=CDS|length=4842bp|location=Sequence derived from alignment at scaffold_507:131262..141755+ (Clytia hemisphaerica)
ATGGCTGTCAACGTTTTCAACACTGGCGCAACATCTGACAATCTCAGTCG
ACATGAAATGCTAACTTGGATCAATGACAGTTTACaatcaaattttacaa
aaatagaaCAAATGGCTTCAgGTGCTGCATATTGTCAATTTCTTGATATG
CTGTTTGAAAACTGTGTACCAATGAAGAAAGTCAAAGTTCAGGCTAAGTT
AGAACATGAGTACATTGTCAATTGGAAACTGCTACAAAATGGCTTCAAAA
AGGTTGGCGTAGATAAGACTATACCAGTAGATAAATTGATCAAAGCACGA
TTCCAAGACAATTTCGAATTTTGTCAGTGGTTCAAGAAGTTTTTCGATGC
AAACTACGCTGGACAAGAGTACGACGCATTGGCCATCCGTGGAGGTCTCC
AACCCATTGCTGACGGAAAGAAACCTGCTGCAGCTGGCTCAAGAAGTATG
GCAGCTCCCTCAAAGTCAAGGGCCGCTCCACCCAAACGAACAGCCGCCCC
TAAAGCAGCCCCTGTATCAAAAGCACCAAGTAGTAAAGGGTCAGGTGTTA
GCCAACAAGAAATGGACACTGTAACTGCCGAACTCTCAGAAATGAAGACT
AGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTCGGCAAATTACG
TGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGGAACACCCCTTA
GTGAAAAAGTACTGGCCATCTTATACGCAACTgagGATGGTTTCGCACCA
CCGGAAGAAGAAGAAGGGGCAGAATATATCGATGGAGGTGAACCTGAAGA
ATTCTAAATGGCTGTCAACGTTTTCAACACTGGCGCAACATCTGACAATC
TCAGTCGACATGAAATGCTAACTTGGATCAATGACAGTTTACaatcaaat
tttacaaaaatagaaCAAATGGCTTCAgGTGCTGCATATTGTCAATTTCT
TGATATGCTGTTTGAAAACTGTGTACCAATGAAGAAAGTCAAAGTTCAGG
CTAAGTTAGAACATGAGTACATTGTCAATTGGAAACTGCTACAAAATGGC
TTCAAAAAGGTTGGCGTAGATAAGACTATACCAGTAGATAAATTGATCAA
AGCACGATTCCAAGACAATTTCGAATTTTGTCAGTGGTTCAAGAAGTTTT
TCGATGCAAACTACGCTGGACAAGAGTACGACGCATTGGCCATCCGTGGA
GGTCTCCAACCCATTGCTGACGGAAAGAAACCTGCTGCAGCTGGCTCAAG
AAGTATGGCAGCTCCCTCAAAGTCAAGGGCCGCTCCACCCAAACGAACAG
CCGCCCCTAAAGCAGCCCCTGTATCAAAAGCACCAAGTAGTAAAGGGTCA
GGTGTTAGCCAACAAGAAATGGACACTGTAACTGCCGAACTCTCAGAAAT
GAAGACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTATTTCGGCA
AATTACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGTGGGAACA
CCCCTTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgagGATGGTTT
CGCACCACCGGAAGAAGAAGAAGGGGCAGAATATATCGATGGAGGTGAAC
CTGAAGAATTCTAAATGGCTGTCAACGTTTTCAACACTGGCGCAACATCT
GACAATCTCAGTCGACATGAAATGCTAACTTGGATCAATGACAGTTTACa
atcaaattttacaaaaatagaaCAAATGGCTTCAgGTGCTGCATATTGTC
AATTTCTTGATATGCTGTTTGAAAACTGTGTACCAATGAAGAAAGTCAAA
GTTCAGGCTAAGTTAGAACATGAGTACATTGTCAATTGGAAACTGCTACA
AAATGGCTTCAAAAAGGTTGGCGTAGATAAGACTATACCAGTAGATAAAT
TGATCAAAGCACGATTCCAAGACAATTTCGAATTTTGTCAGTGGTTCAAG
AAGTTTTTCGATGCAAACTACGCTGGACAAGAGTACGACGCATTGGCCAT
CCGTGGAGGTCTCCAACCCATTGCTGACGGAAAGAAACCTGCTGCAGCTG
GCTCAAGAAGTATGGCAGCTCCCTCAAAGTCAAGGGCCGCTCCACCCAAA
CGAACAGCCGCCCCTAAAGCAGCCCCTGTATCAAAAGCACCAAGTAGTAA
AGGGTCAGGTGTTAGCCAACAAGAAATGGACACTGTAACTGCCGAACTCT
CAGAAATGAAGACTAGCGTGGACGGATTGGAAAAAGAGCGAGATTTTTAT
TTCGGCAAATTACGTGATATCGAAGTATTGTGTCAAGAAGAAGGAGCAGT
GGGAACACCCCTTAGTGAAAAAGTACTGGCCATCTTATACGCAACTgagG
ATGGTTTCGCACCACCGGAAGAAGAAGAAGGGGCAGAATATATCGATGGA
GGTGAACCTGAAGAATTCTAAATGGCTGTCAACGTTTTCAACACTGGCGC
AACATCTGACAATCTCAGTCGACATGAAATGCTAACTTGGATCAATGACA
GTTTACaatcaaattttacaaaaatagaaCAAATGGCTTCAgGTGCTGCA
TATTGTCAATTTCTTGATATGCTGTTTGAAAACTGTGTACCAATGAAGAA
AGTCAAAGTTCAGGCTAAGTTAGAACATGAGTACATTGTCAATTGGAAAC
TGCTACAAAATGGCTTCAAAAAGGTTGGCGTAGATAAGACTATACCAGTA
GATAAATTGATCAAAGCACGATTCCAAGACAATTTCGAATTTTGTCAGTG
GTTCAAGAAGTTTTTCGATGCAAACTACGCTGGACAAGAGTACGACGCAT
TGGCCATCCGTGGAGGTCTCCAACCCATTGCTGACGGAAAGAAACCTGCT
GCAGCTGGCTCAAGAAGTATGGCAGCTCCCTCAAAGTCAAGGGCCGCTCC
ACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCTGTATCAAAAGCACCAA
GTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAATGGACACTGTAACTGCC
GAACTCTCAGAAATGAAGACTAGCGTGGACGGATTGGAAAAAGAGCGAGA
TTTTTATTTCGGCAAATTACGTGATATCGAAGTATTGTGTCAAGAAGAAG
GAGCAGTGGGAACACCCCTTAGTGAAAAAGTACTGGCCATCTTATACGCA
ACTgagGATGGTTTCGCACCACCGGAAGAAGAAGAAGGGGCAGAATATAT
CGATGGAGGTGAACCTGAAGAATTCTAAATGGCTGTCAACGTTTTCAACA
CTGGCGCAACATCTGACAATCTCAGTCGACATGAAATGCTAACTTGGATC
AATGACAGTTTACaatcaaattttacaaaaatagaaCAAATGGCTTCAgG
TGCTGCATATTGTCAATTTCTTGATATGCTGTTTGAAAACTGTGTACCAA
TGAAGAAAGTCAAAGTTCAGGCTAAGTTAGAACATGAGTACATTGTCAAT
TGGAAACTGCTACAAAATGGCTTCAAAAAGGTTGGCGTAGATAAGACTAT
ACCAGTAGATAAATTGATCAAAGCACGATTCCAAGACAATTTCGAATTTT
GTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTACGCTGGACAAGAGTAC
GACGCATTGGCCATCCGTGGAGGTCTCCAACCCATTGCTGACGGAAAGAA
ACCTGCTGCAGCTGGCTCAAGAAGTATGGCAGCTCCCTCAAAGTCAAGGG
CCGCTCCACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCTGTATCAAAA
GCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAATGGACACTGT
AACTGCCGAACTCTCAGAAATGAAGACTAGCGTGGACGGATTGGAAAAAG
AGCGAGATTTTTATTTCGGCAAATTACGTGATATCGAAGTATTGTGTCAA
GAAGAAGGAGCAGTGGGAACACCCCTTAGTGAAAAAGTACTGGCCATCTT
ATACGCAACTgagGATGGTTTCGCACCACCGGAAGAAGAAGAAGGGGCAG
AATATATCGATGGAGGTGAACCTGAAGAATTCTAAATGGCTGTCAACGTT
TTCAACACTGGCGCAACATCTGACAATCTCAGTCGACATGAAATGCTAAC
TTGGATCAATGACAGTTTACaatcaaattttacaaaaatagaaCAAATGG
CTTCAgGTGCTGCATATTGTCAATTTCTTGATATGCTGTTTGAAAACTGT
GTACCAATGAAGAAAGTCAAAGTTCAGGCTAAGTTAGAACATGAGTACAT
TGTCAATTGGAAACTGCTACAAAATGGCTTCAAAAAGGTTGGCGTAGATA
AGACTATACCAGTAGATAAATTGATCAAAGCACGATTCCAAGACAATTTC
GAATTTTGTCAGTGGTTCAAGAAGTTTTTCGATGCAAACTACGCTGGACA
AGAGTACGACGCATTGGCCATCCGTGGAGGTCTCCAACCCATTGCTGACG
GAAAGAAACCTGCTGCAGCTGGCTCAAGAAGTATGGCAGCTCCCTCAAAG
TCAAGGGCCGCTCCACCCAAACGAACAGCCGCCCCTAAAGCAGCCCCTGT
ATCAAAAGCACCAAGTAGTAAAGGGTCAGGTGTTAGCCAACAAGAAATGG
ACACTGTAACTGCCGAACTCTCAGAAATGAAGACTAGCGTGGACGGATTG
GAAAAAGAGCGAGATTTTTATTTCGGCAAATTACGTGATATCGAAGTATT
GTGTCAAGAAGAAGGAGCAGTGGGAACACCCCTTAGTGAAAAAGTACTGG
CCATCTTATACGCAACTgagGATGGTTTCGCACCACCGGAAGAAGAAGAA
GGGGCAGAATATATCGATGGAGGTGAACCTGAAGAATTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069759-exon-scaffold_507-1491911889:131262..131476 | TCONS_00069759-exon-scaffold_507-1491911889:131262..131476 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1510915933:131262..131476 | TCONS_00069759-exon-scaffold_507-1510915933:131262..131476 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1575043694:131262..131476 | TCONS_00069759-exon-scaffold_507-1575043694:131262..131476 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1491911889:137432..137470 | TCONS_00069759-exon-scaffold_507-1491911889:137432..137470 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1510915933:137432..137470 | TCONS_00069759-exon-scaffold_507-1510915933:137432..137470 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1575043694:137432..137470 | TCONS_00069759-exon-scaffold_507-1575043694:137432..137470 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1491911889:137864..137970 | TCONS_00069759-exon-scaffold_507-1491911889:137864..137970 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1510915933:137864..137970 | TCONS_00069759-exon-scaffold_507-1510915933:137864..137970 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1575043694:137864..137970 | TCONS_00069759-exon-scaffold_507-1575043694:137864..137970 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1491911889:138209..138523 | TCONS_00069759-exon-scaffold_507-1491911889:138209..138523 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1510915933:138209..138523 | TCONS_00069759-exon-scaffold_507-1510915933:138209..138523 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1575043694:138209..138523 | TCONS_00069759-exon-scaffold_507-1575043694:138209..138523 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1491911889:140305..140457 | TCONS_00069759-exon-scaffold_507-1491911889:140305..140457 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1510915933:140305..140457 | TCONS_00069759-exon-scaffold_507-1510915933:140305..140457 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1575043694:140305..140457 | TCONS_00069759-exon-scaffold_507-1575043694:140305..140457 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1491911889:140976..141755 | TCONS_00069759-exon-scaffold_507-1491911889:140976..141755 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1510915933:140976..141755 | TCONS_00069759-exon-scaffold_507-1510915933:140976..141755 | Clytia hemisphaerica | exon |
| TCONS_00069759-exon-scaffold_507-1575043694:140976..141755 | TCONS_00069759-exon-scaffold_507-1575043694:140976..141755 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_507 | supercontig | scaffold_507:131262..141755 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008017 | microtubule binding |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008017 |
microtubule binding |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00069759 vs. Swiss-Prot (Human)
Match: MARE1 (Microtubule-associated protein RP/EB family member 1 OS=Homo sapiens GN=MAPRE1 PE=1 SV=3) HSP 1 Score: 247.669 bits (631), Expect = 3.473e-77 Identity = 133/249 (53.41%), Postives = 165/249 (66.27%), Query Frame = 2
Query: 95 MAVNVFNTGATSDNLSRHEMLTWINDSLQSNFTKIEQMASGAAYCQFLDMLFENCVPMKKVKVQAKLEHEYIVNWKLLQNGFKKVGVDKTIPVDKLIKARFQDNFEFCQWFKKFFDANYAGQEYDALAIRGGLQ-PIADGKKPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQEMDTVTAELSE----MKTSVDGLEKERDFYFGKLRDIEVLCQEEGAVGTPLSEKVLAILYAT 826
MAVNV++T TSDNLSRH+ML WIN+SLQ N TKIEQ+ SGAAYCQF+DMLF + +KKVK QAKLEHEYI N+K+LQ GFK++GVDK IPVDKL+K +FQDNFEF QWFKKFFDANY G++YD +A R G + +A A S S A + AA P D AEL + +K +V+ LEKERDFYFGKLR+IE++CQE P+ ++++ ILYAT
Sbjct: 1 MAVNVYSTSVTSDNLSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPVAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYAT 249
The following BLAST results are available for this feature:
|
