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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069466 ID=TCONS_00069466|Name=TCONS_00069466|organism=Clytia hemisphaerica|type=transcript|length=386bp
TTTTGTCATTATTTGCATGcgcattttatatttttacatgtcggccaact
ttcttttcaaatcgtCAAACGTGGGTACAGAACTTCCACAAAGATTATAT
ACAACATGGACAAACCAAAGTTAGCTCGTGTTATGAAGATTCTTGGAAGA
ACTGGCTCACAAGGTCAATGTACACAGGTACGTGTGGAATTTATCGACGA
TACCAACCGAAGCATCATCCGCAACGTGAAAGGACCAGTCCGTGAAGGAG
ATGTTTTGACTTTGTTGGAATCTGAGAGAGAAGCTAGGCGATTAAGGTAA
CGTCAACCGTGCCGAGCAGTCATGGAAACACGCATATTGTTAGGGAGAAT
AAAATAACTTAAAATTCTTCATTGAAAATTAAAGAC Run BLAST on NCBI protein sequence of TCONS_00069466-protein >TCONS_00069466-protein ID=TCONS_00069466-protein|Name=TCONS_00069466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=99bp
FCHYLHAHFIFLHVGQLSFQIVKRGYRTSTKIIYNMDKPKLARVMKILGR
TGSQGQCTQVRVEFIDDTNRSIIRNVKGPVREGDVLTLLESEREARRLR Run BLAST on NCBI transcript from alignment at scaffold_50:229283..238092- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069466 ID=TCONS_00069466|Name=TCONS_00069466|organism=Clytia hemisphaerica|type=transcript|length=8810bp|location=Sequence derived from alignment at scaffold_50:229283..238092- (Clytia hemisphaerica)
TTTTGTCATTATTTGCATGCGCATTTTATATTTTTACATGTCGGCCAACT
TTCTTTTCAAATCGTCAAACGTGGGTACAGAACTTCCACAAAGATTATAT
ACAACATGGACAAACCAAAGTTAGCTCGTGTAAGTCGCATGTTATCAATA
TTCACTCTTTCAAATTTCATATAACGTAATCAAATTCCTTACAACCAGTT
TTTATGCAACTAAACTCATTTCATAGGAAAATTTTAGCTGGTAGGCAACT
AAGGGATCTTTGACAAAAAACTTTCGAATTTTTTATCGACATTGGGCCGA
TAAGTGGGTGGGGGGGGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCATTCATTGTTAATACATTTTTTAT
TTGAAAGTAATCTCTTCATGGAATAAAAAGATATAGTCAAATCTTGTAGG
GTCATTTTTCAAAATTTTTTTGCCAAATTCAATTTTCGCATTTCGCCATT
TTACCCTACGCAAATGCACGTGGCGCGCTTGTTCGCAGCTTTAAAAGTAC
AGTTTTGAACTAGCTTTGATAAAAAAACTCTTTTATCATTGGCCAGCGCG
CTGCCTTTACCTTCGAAATGTTGCGACTTCATCTCTTCATTTTAAATTTG
TGATTAACAATATCAATGGTATGAAAAAACTCAATGTTGGCACAAATAGA
CAAAAATTCAACGATGACGGGTGGGAAGGCGATGGCGGACAATATTGGAG
GAAATTGTGTTTTCAAAGATGTAAAAGTTACATTTAAAAAATTTTGGCCG
ATAAGAGCAAGGGTGGGGGTGGGGTCTGAAGCTTATTGGCCCAATGCTGA
TAAAAAATTCAAAAGTTTTGTGTCGAAGACCCCTAATACACCTTTCCTGT
TATCCATTTTGTAGTTTCTGGGATGGTGTAAACAAACCTGCTTTTGTCTG
CGTATCCTGCTGGGGTCTCAAATAACTTGTGTGTGTTGTCTGACTTACTG
ATAATTTGCTAACTTTTCGAAATCTGTGTGCGCATTATTTTGTTGCTCTC
CACCGCTTGGTCTCTGGGCAGTCTGGGAAATCCCTCATTGCAGTATACTG
CAATTGTGGTAGTTTTCATTCATGGTTAGCCTACAAAGGCTTGTAATGGC
TACATATAGTGCTGGTCAATAAAGATAAACAAACATCAACTGTAAAAAAT
CGAACGAGAAGATAGCTTTTCTTTATTAAAAGAATCTGATCTACAGCAAA
AATATTTTGTCTGTGCGTTAAAAAGGTATGATCAATCATGTACCAAAATT
GCCTGTTTTCTCCTTCTGTTTCTTGAATATACTGGAATTGCGGTACTGCT
ATTGCAGTAAAAAATTGCTATGTATATACCGCAATTGAGGGATTTCCCTG
ACTGCTGGAGGTACCTGTTTTTGCTTGCGTTTCCTTAGGTTAAGTTAGTT
TGAGCTTTTCTTAAGTTCTATCAATTAAAATCCCTCAAATTTAGGTATGT
TCTTTCTATTCATTATATTAGGGGCCATTGACAAAAGAAAATCCTTATTT
TAGCCTCAGGCTCAGCTTAAACGGTGTACTAATTCCAACTTTTGTTCTTG
CTTTTGAAACTTATGTAAACATTCCGGTATGTTTCTGATGTACTTGACTA
CCGGTTGTCAAACCGGGATAAAACAGGGGTACTGCAATAAAAAGTTATGT
AAGAAAGACCATCATCTCAACGTTCTTAACCAATAACCTTTGATAGAATC
GTTCCCCTAATTGTCTTCCTCTATCTTATGTACTTCAGAAAAACCAAAAA
CATTTCCCTTAAAAGGTTAGCCTTACAAAGCCCTAGCTATTAATATAACC
CCCTGGTTGAATCTTTGTTTTCTTATCCTGTAAATATAACGAACAGCTAT
TCTACAATATTGCTGTCACATGACTTTTTTCTACCGTGTGATGCAAATCG
CACATTTTCATTGGATTGAATTCAGTTGATTTGATTTGATTTTGATTATT
TCTTTTTCTTTTGCCATTATGTAATAAAAATTCTACAATGTTTGGGGAAC
TCAAATATCTAAAAGTTTTTCTATTTTCATGGAAAAATGAGCTTTATAGG
CAATTACTTTGCCAAAGGTTTGACTTTTCTTTGTGAATTTTCATCTTCAA
TCTTTATTTTAATCTTGGTATTTTCTAGAACTATTTGGGAGTAGAGAGCT
TTTTANAAGGTTTGACTTTTCTTTGTGAATTTTCATCTTCAATCTTTATT
TTAATCTTGGTATTTTCTAGAACTATTTGGGAGTAGAGAGCTTTTTACAT
ATCTTAAAAAGGTTTACTAATTCTTTAGATATAGTCAAAAGTTTGACATC
GGTGAAAACTTATTTCTTTGATCGAACATTGACACATGTTTTTTCCAAAT
CATCAGACACATGTGCTCTCACCTAATAATGAGTTCATTTCCCTCCCAAA
CAATTTTGTTGGCACACATTTTCCAAGGCCATATCTGAGAAGTTTGAATT
TCGGGAAAGGTGTATTGTGCAATTGGCGTTGGCCTTCCCTAACCCCTTGC
AGGCAATAGATTGAACATGGTAGTTAAGTCTAGGAATACTACTAAATAAA
GGGACATTGCTTATAATGAGGGACAGTCATTATGATAACAGGTTATGTTT
TATCTTCCACTTTAAAGGCTGTTTTTACCAAAATTTTAGTGATTTCATGA
GGGGCAGCGTCAGTGAGCCAGTTGTTAAAAAGGCATGAGAAATGATGTAA
GAAAGGGAATCCCTAGATTATTGGACACTGTCCCTAAATTCAGGAACTAA
AAAACTCTAAATATCTTATGAAAGGTGCACAAGAGGTTTCTAAATTGGCA
CTTCATTGGAATTGTGTTATTACAGCCATCTTTGTTAAGTTAGAATTCAA
AAAATTAACGCAGTCAAAGGCTCAATCAGCAAATTTGATATACTTTTGTT
TATTAAAAAAGTGCATGTGAAATGTGTAAAGTCTATTCTTGATTCTCAGA
ATTTTTATTTGTTAAAAGCACAGGAAAAAGTAGCTGTAACAAAAATAACT
CTAGCATAAACTCCCTTATTTTTCATGTGAGATATTTGGGGTAGTTTTTT
ATTATTTTCTTTTTCTTTTTTCTTTCCAGGTTATGAAGATTCTTGGAAGA
ACTGGCTCACAAGGTCAATGTACACAGGTAAAAAGTCTATCTATATTTCT
TGCCAGTCTTTTTCTTTCTCGTGGGGATCTACAGTGATACGTTTGAATAC
TCTTGGTTGTGTATAGTTCATTTTAGTAGGCCTGGGTTAATGAAATTTCA
TTAAAATTGTACAAATTTGGAACAAAGTTGACAGTTGGGCAAACCTATAA
TTTCAAAAGCCAAGGCATGAAGGCACAATGAAAGTTAACATTTTTGGTGG
TAGTTTTTAACTGGGGTCCGGTTGTCCGAATCAAGTTTTGATTATTTTGT
GAAACGTGTCATAAAGCCCAGCTAGAATCATTTACAATTCAAATTTCTAA
AGTGCTGATAACTTCTGAACTATTTATGCAATCATTTTCAAATTTTGACA
CATGCCAGGCATTGACAATGTGAATAGCACACCGCTATGCAAACGTCATA
ATTATTACTTTTAACATTTGACCGAAATTCAATCCCACAATCCTTTTCAT
CTTGATTCGTAATGCGTGCAAGTTATTACTTTTGTATCGTCAATAAGTGT
AATTGACTTGCGAAAGCAATTAATGCAAAGGATGATGGGATCAAAACTCG
GACAAACAGTAAATTTGATGTCTATTTTTAGAATCACTATGGTATGCTAT
TGAAAAAATAATTTTAAAAGTTGATGTCATCATTTATGACGTTTACTCAT
CTTTCGCATGGATATTAAAAATTCTTAATGGAAATGCAAACCGGCAATTA
CACGCTTTTTCTTTTATAAGAATAACTTCTATAAGAATATCAGGGTGAGA
TTTCGGGTTTAAAACGATAGGCCTATTGTTTAGAACAATAGAAAAATAAG
AATAATGCTTACCCTCAACCAAAGTACACTATTCTTATAAAAAAAAAGCG
TGTATGTTAAGCAACAATTTTTATCTTTATGAATCTTCAAACAAAATCTG
AATATTTTTATTGGATTGACATTTTTGTTATATTTTGGTGGAAATTTTGC
TTTTTGGATGATGTCATCAATTTCTTTTTCTTTCTGGAATTTTGTGTCAT
GATGAAGAATATCTGTACCAATTTTCATGGCCATAGCTCTTCTTCCCCTG
GGGCTATAAAAATCAAATCAGTTTGGGGTTAATAGGGTTAAGGTACTCTT
CTCTTGTTAAATATTTAAGAGCTGTGGGAAAGGTTGGAAAATCTATTAAA
TGCTGCATTGGTGTCAGTAGTACATACAGTCCTGATAAGCAGGAATCACA
TAGTGCATTGCCTACCAGTCTGGAAACTTCGAAAGTTAAAAGAAAAGTTC
GTTTTTGGATGGTATAGCCTTTTCCTTTAGTCTGACTAATGAGACTGATG
GGTGCTTAATGCAAATTGAGAAGGATGAGGAAAGTGTGCTGTGCCAGTCT
AGATCCTTACACTTATCGTCCTTCTTAATTTGCATTTCAGTGTTGAAGCA
TCTTGTGAATGAAAATGAGTGCCAAGAAGAAGCAGAAAAGTGGATGGTTG
TTATGTGACCAGTGCGATAATAATGTGTTAACAAAGTCAGAACACAAGTG
TGGTGTTGATACTGGATCGTATTTTGATGGAGAAAGACTGGTTGCTTTGG
TTAGAAGCAATGATGCTATAAATGAACCAATGCTTGAATCGCAAAATCAC
TTAGTCTTGATACATCCAACGACCATCAAGTTGTGTTCATTTCAAGTAGC
TGGTTCTATCCTCGTCACAAATGGAGTTCAGAAGACCTTTTGTATTGTAT
GGCCTTCAACCAAAGTCAGTCTGGGTGATGTGGTTATCAGTCCAGTTAAG
CTTCGTTCGATTCAATGTCAGTATAATCAGAGTGTCCTTCTAGGCAGATT
AACTTTACCACCCGTCATTGCTGATTCTGCTCAAATTACGGTACCTGGAA
TTAAGTCAGTAAATTTTGACGAACTCAGAATATCAATCATTGATATCCTG
GACAAGGCTTTGATATGTGCTGGAGATCATCTAGATGTTCTTTTTAACGG
AGTAATCTATAACATTGTAATAGACAACGTTGAAGTGGATGTTTGTCAAC
AACTTTCTTCCTTGCAAATTGACATTGAATCCAAAATTGGTTACGTGTTT
AGTAAAGAGCATACAGTTTTGGAGTTTGGTAAGGGTAGACCAGACTTGGA
AGTTGAAGTACTACCTCTTCAACCTGCAAGACCATTTGGTGGCCTCCACA
AGCAAGAACGTCATTTGAAAGACTTCATTCTTCATTCACTTGATAACAAG
CTTTATAAGGAATACGGTATTTCCTTACCTAAAGGACTCTTAGCTTATGG
TCCAAGTGGTACAGGTAAATCACTTTTAGTGAAATCTTATGTCAAACAAT
TTCCTGGTATATATACAAGGGAAATTAATGGACCTGAACTCACAAGTAAA
TTTTTTGGGGAAACAGAACAAAACCTGAGAGACATATTTACCGATTGTCA
AGAGAACGCACCGTCAATACTTGTTATTGATGAATTTGATACATTGTGCC
CTAAAAGAACTGACAACAGCAATGATTCAGAAAGGCGTATTGTTGCCACA
ATGTGTACCTTAATGGATTCGGTCGACCAATCTATGCCATTTGTTGCCAT
TGCATTAACAAACAAGCTTAATGATATCGATTCTGCATTACGGCGTGCTG
GTAGATTCGAAAAGGAAGTTGAATTTTCAGTTCCTAACACCACAGAAAGA
GCTGACATTCTTGTTAAATTGTTAAATGATACAAAGAATAACTTGACGGA
TGATGATATTTTACAGCTTGCTAGTACCACTCATGGATATGTCGGTGGTG
ATCTGAGTGCTCTTTGCAAGGAAGCTGGCTCTACTTTCATCAAGCGTAAG
AATCGTGATCAATTGTTACCTGATTTGGTGACTAAAGATGATTTTTCCGA
CGCTTTGTGTGTAGTTCGTCCAAGTGCACTCAAGGCAATGACAGTTGATG
TACCAAAGGTCTATTGGAAGGATGTCGGTGGCCAGGATGAAGTGAAGCAA
AAATTGAAAGAAGCTGTAGAATGGCCTCTCAAGCATTCTGCATCATTCAG
TCGTCTCGGTATTAAGCCACCTTCTGGTTTGTTGTTATATGGCCCACCAG
GCTGCTCCAAAACTTTGACAGCTAAAGCCCTAGCCACTGAAAGTGATATT
AATTTTATCTCGATCAAGGGACCAGAACTGTTCAATAAATACCTTGGAGA
ATCGGAACGTGCAGTGAGGGAGCTTTTCCATAAAGCGAGAATGTCAGCAC
CTACTATCGTATTCTTTGATGAAATTGATGCCCTGGGTGTTCAGAGGAAA
GGCAAAGAGAATAATGCAGGAGATAAGGTTCTTGCTCAACTCCTTACAGA
ATTAGACGGCGTGGAATCCTTGACTGGTGTGATCGTAGTCGCTGCCACAA
ACCGACCTGACATTATCGATCCAGCACTGGTCCGACCTGGTCGTATTGAT
CGAATGGTTTACGTACCTTTGCCCAATGACAAAACCCGCCGCGAAATCTT
TCAAATCCAGTTTCGGTCTATGCCTATCACTAGTGAAGTATCTATTGAGA
AACTTGTTCGTTCAACGGAAGGTTACTCTGGCGCAGAGATATGTTCAGCT
TGCCAAGAAGCAGGACTTGTGGCGCTTCGTGAAGATATAAACGCGACGAG
CATTACAGAAAAACATTTTGAAAAAGCCTTAGAACAAGTTAAACCAGGAA
CCACAAAAGAAACTGTTCAATTCTATACAGAATTTTCTTTGACGCATTAG
TTATGAACTGTAGACATGTCGTTCATAATATGACATTTAAACCATTTATG
GAATATTTTAGTTTATCATTCTACTTTTTACTTGATCTTATTTTTAGAAA
ATTGAATCGTATACATCTCAATTGATTGCACTTTTTCCATTCTCATCTAA
CAATTTAACAATTTGATTAAGCCTCTCCAGGCGGTAATTTCTTATTTGTA
TACTGATGGTGAAATAAATACATCAGATCAGATTTAAATATGAAGACAGG
CTCTTCTCTCCAGTTAATTCTCAATTGATCGTCGGAAGGGATGCTCGAAA
ATGGCAGTCGAGAAATATTTTAGGCGAAAAATCATTATTACTCTTGGGTT
CCAAATAAACGGCCCTCCCCGCTTGATAATATTTCGATAATTTTCCAACC
CTTCCCGGACCTTATAAGGACCCCTTGTTTCTTAATTTTTAAGAATATTT
TTAGCTGTCAAATAGAAGGCCCCTTATTTTGATCTAAATAGCCTGATTTT
AGCCTATATTTACCTTATTTTCTGTTTTCAGAAGTACAATTTCCAACCCC
CCCCCCCCCCGGCAATTAGGCCCCACGTTTATTTGGAACCTAACAGAATG
AGCTAAAAACCTATTTTTTAACTTAAAATTGCAAAAAATTCTTGAAACAC
GTCTCCCACTTGCCCTACGTTTTGCCCGGATTGGTATTATGCATTTTACT
CTTAAAATTTTTCAGGTACGTGTGGAATTTATCGACGATACCAACCGAAG
CATCATCCGCAACGTGAAAGGACCAGTCCGTGAAGGAGATGTTTTGACTT
TGTTGGAATCTGAGAGAGAAGCTAGGCGATTAAGGTATAAAAAATCTTCA
ATTCGCTTGTTCATGCGAAGGGGGCAAGTTAAAAAAAAATAATGACGTCA
TCGACTCAAAGTATATTTTCCCTCGCCCACCGCAAACTTGCTCTTCTTTC
TATTTTTTAATTTTTGCTTATCTCGGTTGCCTTGTTTTTCTTTTGAATTT
TTGGCTTTCAGTGCTTTTGGATTTACGATTTACGGTTTCTAATCAGCAAG
TAGGAATAACCTCAGAAAAATTTCGAAAAATGAAAAGCAGGAAAATGAAT
TTAACCTGATTTTCTTTTAGGTAACGTCAACCGTGCCGAGCAGTCATGGA
AACACGCATATTGTTAGGGAGAATAAAATAACTTAAAATTCTTCATTGAA
AATTAAAGAC Coding sequence (CDS) from alignment at scaffold_50:229283..238092- >TCONS_00069466 ID=TCONS_00069466|Name=TCONS_00069466|organism=Clytia hemisphaerica|type=CDS|length=1200bp|location=Sequence derived from alignment at scaffold_50:229283..238092- (Clytia hemisphaerica)
GTAAGTACGTGTGGAATTTATCGACGATACCAACCGAAGCATCATCCGCA
ACGTGAAAGGACCAGTCCGTGAAGGAGATGTTTTGACTTTGTTGGAATCT
GAGAGAGAAGCTAGGCGATTAAGGTTATGAAGATTCTTGGAAGAACTGGC
TCACAAGGTCAATGTACACAGTTTTGTCATTATTTGCATGCGCATTTTAT
ATTTTTACATGTCGGCCAACTTTCTTTTCAAATCGTCAAACGTGGGTACA
GAACTTCCACAAAGATTATATACAACATGGACAAACCAAAGTTAGCTCGT
GTAAGTACGTGTGGAATTTATCGACGATACCAACCGAAGCATCATCCGCA
ACGTGAAAGGACCAGTCCGTGAAGGAGATGTTTTGACTTTGTTGGAATCT
GAGAGAGAAGCTAGGCGATTAAGGTTATGAAGATTCTTGGAAGAACTGGC
TCACAAGGTCAATGTACACAGTTTTGTCATTATTTGCATGCGCATTTTAT
ATTTTTACATGTCGGCCAACTTTCTTTTCAAATCGTCAAACGTGGGTACA
GAACTTCCACAAAGATTATATACAACATGGACAAACCAAAGTTAGCTCGT
GTAAGTACGTGTGGAATTTATCGACGATACCAACCGAAGCATCATCCGCA
ACGTGAAAGGACCAGTCCGTGAAGGAGATGTTTTGACTTTGTTGGAATCT
GAGAGAGAAGCTAGGCGATTAAGGTTATGAAGATTCTTGGAAGAACTGGC
TCACAAGGTCAATGTACACAGTTTTGTCATTATTTGCATGCGCATTTTAT
ATTTTTACATGTCGGCCAACTTTCTTTTCAAATCGTCAAACGTGGGTACA
GAACTTCCACAAAGATTATATACAACATGGACAAACCAAAGTTAGCTCGT
GTAAGTACGTGTGGAATTTATCGACGATACCAACCGAAGCATCATCCGCA
ACGTGAAAGGACCAGTCCGTGAAGGAGATGTTTTGACTTTGTTGGAATCT
GAGAGAGAAGCTAGGCGATTAAGGTTATGAAGATTCTTGGAAGAACTGGC
TCACAAGGTCAATGTACACAGTTTTGTCATTATTTGCATGCGCATTTTAT
ATTTTTACATGTCGGCCAACTTTCTTTTCAAATCGTCAAACGTGGGTACA
GAACTTCCACAAAGATTATATACAACATGGACAAACCAAAGTTAGCTCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069466-exon-scaffold_50-1575043694:237964..238092 | TCONS_00069466-exon-scaffold_50-1575043694:237964..238092 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1575043694:234216..234263 | TCONS_00069466-exon-scaffold_50-1575043694:234216..234263 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1575043694:229659..229777 | TCONS_00069466-exon-scaffold_50-1575043694:229659..229777 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1575043694:229283..229372 | TCONS_00069466-exon-scaffold_50-1575043694:229283..229372 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1510915933:237964..238092 | TCONS_00069466-exon-scaffold_50-1510915933:237964..238092 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1510915933:234216..234263 | TCONS_00069466-exon-scaffold_50-1510915933:234216..234263 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1510915933:229659..229777 | TCONS_00069466-exon-scaffold_50-1510915933:229659..229777 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1510915933:229283..229372 | TCONS_00069466-exon-scaffold_50-1510915933:229283..229372 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1491911889:237964..238092 | TCONS_00069466-exon-scaffold_50-1491911889:237964..238092 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1491911889:234216..234263 | TCONS_00069466-exon-scaffold_50-1491911889:234216..234263 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1491911889:229659..229777 | TCONS_00069466-exon-scaffold_50-1491911889:229659..229777 | Clytia hemisphaerica | exon |
| TCONS_00069466-exon-scaffold_50-1491911889:229283..229372 | TCONS_00069466-exon-scaffold_50-1491911889:229283..229372 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_50 | supercontig | scaffold_50:229283..238092 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
| GO:0005622 | intracellular |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006412 |
translation |
| cellular_component |
GO:0005622 |
intracellular |
| cellular_component |
GO:0005840 |
ribosome |
| molecular_function |
GO:0003735 |
structural constituent of ribosome |
Blast
BLAST of TCONS_00069466 vs. Swiss-Prot (Human)
Match: RS28 (40S ribosomal protein S28 OS=Homo sapiens GN=RPS28 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.658e-25 Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 1
Query: 118 KLARVMKILGRTGSQGQCTQVRVEFIDDTNRSIIRNVKGPVREGDVLT 261
KLARV K+LGRTGSQGQCTQVRVEF+DDT+RSIIRNVKGPVREGDVLT
Sbjct: 10 KLARVTKVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDVLT 57
The following BLAST results are available for this feature:
|
