TCONS_00069458 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069458
Unique NameTCONS_00069458
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1328

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069458 ID=TCONS_00069458|Name=TCONS_00069458|organism=Clytia hemisphaerica|type=transcript|length=1328bp
tttgcgaactttggactttggaaaaaccaaaaagttttaaaaataattct
tcAAAGAGAAAGATACATGCATCGCACTGTCTCAAGAACCAGTAAGAACT
AAAGCTATATAAATAATGTTCAAAAACTCACTTAAAAGGTTGATAACGCA
ACAACCCAGGAAAGTCATTGGTTTCTCAGTCAGAAGTATGAGTGGCGATT
ATCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTTTGCAC
GTGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAATTTTT
CAAAGATATGACAAAATGTTTCACTCATATTGCAGATGATCCACACGCAA
GAGTTGTTGTGTTGTCAGGAAGCGGAAAGCTCTTCACAGCTGGTTTGGAT
GTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCTGATGGAGACGTCGG
TCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGAGATTCAAGATTCGT
TGACAGTGATCGAAAAATGTCCACAGCCCGTCATAGCGGCTGTCCATTCA
GCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCTTGTGATATTCGGAT
GTCCACTGATGATGCTTGGTTTCAAATCAAGGAAGTTGATCTTGCATTGG
CTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGAAGCCAC
AGtttaaTTCGTGAATTAGCGTACACAGCACGTCCAATGTATGCAGATGA
AGCGCAAAGGAACGGATTTGTCGGACGTGTTTTCAAGGACAAGGAAGAGA
TGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCT
ATCGCCGTCCAAACAACCAAATTACAGTTGAACTACGCCCGTGATCATGG
AGTCGATGAAGGTCTGGATTACATTGCATCGTGGAACATGGGGTTGCTTC
AGACACAAGATATGTTGAAAGCGGCACAGGCTACCATGCAAAATGAGACA
GCTTCGTTTGACGATATGCTTCCTCCATCAAAACTATGATCAGAAAAGGA
TAAGAAACTGGGGAAATGGTCGTACAACGCTAATGTTGACTTCTGTTGCA
TTCTCCCTGAATTAGATTTGGAAAATCGTTTTTAAGGAAGGATGGAAACA
AACCGTACATAGATAACGTCTCTcattaaattttactttttctttttgaa
ctCTTCACTGTAAGTCTTTTCCAAAGCACCACTACTCTACTGTCCACATT
TACATTCTTACATGCTtataaatataataataaaatgtttttgaaataat
atatcttttttagttCATGAATTTGATT
Run BLAST on NCBI

protein sequence of TCONS_00069458-protein

>TCONS_00069458-protein ID=TCONS_00069458-protein|Name=TCONS_00069458-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
MFKNSLKRLITQQPRKVIGFSVRSMSGDYQFETLNVVKPAENVLHVEMNR
PNKRNAMNQQFFKDMTKCFTHIADDPHARVVVLSGSGKLFTAGLDVMSFA
SSLMPTPDGDVGRKAFSMRKMIKEIQDSLTVIEKCPQPVIAAVHSACVGG
GVDMICACDIRMSTDDAWFQIKEVDLALAADIGTLQRMPKLMGSHSLIRE
LAYTARPMYADEAQRNGFVGRVFKDKEEMMKSAFRLAKQIASKSPIAVQT
TKLQLNYARDHGVDEGLDYIASWNMGLLQTQDMLKAAQATMQNETASFDD
MLPPSKL
Run BLAST on NCBI

transcript from alignment at scaffold_50:131266..139727-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069458 ID=TCONS_00069458|Name=TCONS_00069458|organism=Clytia hemisphaerica|type=transcript|length=8462bp|location=Sequence derived from alignment at scaffold_50:131266..139727- (Clytia hemisphaerica)
TTTGCGAACTTTGGACTTTGGAAAAACCAAAAAGTTTTAAAAATAATTCT
TCAAAGAGAAAGATACATGCATCGCACTGTCTCAAGAACCAGTAAGAACT
AAAGCTGTAAGTTTGTTCACTTATTTTTCGTTACACTATCGATACAGTTG
ATAACTTTTTGTAATCAATCACTAACCAATAACATCCAATCGATGGATTG
GACATCAAGCCAATTCAAATATTGGGATTCATAATTATATTAATTTATAA
GGGATGGACGTGCCTGGGCTGGGTTGAAGGCCCTCTTAGGGGCACTCGTA
CCTAGTGACTAAACGTAGGGCTGCGTATCAGCCCTTTTAGGGGCGATGGT
AGGGTATCAATGTGAAATTCTATCAGAAGCTTGTATTAAACTTGAAGTAT
ATGGATTTGGAAGTAATTGCAGTCTGTCAGGTGTATTTTCATTTAAGTAA
AGATGACTCATAATTGTTAATAGAAAAATGCGGTAAGATGAAAAAAATTG
GTAAACACAAAACTGAAGAGTCTGCTAAATTACGTGGGTTACATGCGTGT
CGTGGGTTCGTGGGTTCGTGGGTTCGTGGGTCAAAATATCTCGTGGGTCC
GTGGGTTTGTGGGTCCAAAAAAATATCACGTGGGTTGAAATTACTCGTGG
GTTCGTGGGTTTGTGGGTTCGTGGGTTCGTGGGTCCAAAGTTTCTTGTGG
GTTCAAAAATTCTGATAATTTTCCAAAAATAAAAATAAAAATTCATATGG
GTCATCGGGTATTTTTTAGAGTAGTCGAAAACGCTATCTACGACCTATAG
TAAAGCAAAAATTGTAAAAGTTTAAAATTGAAAAAGTTCCTCATTGTTGT
TCGTTCTTCTCACCCTATAATTAACTCAATAGTTTTTATGAGAAGAAAGA
GCGAAATGGAAAATGTCAAGAAACATCTCCAGCTGATCTGATTTTAATAT
CAATATTTCTACCGCTGATCTTAAGAAACGATGTATATATATAGCCCAAT
TAACGTCACTATGAGGAATCTTATATTTATTTCCCTTTAAGGTTTACCAT
GTTCCTCCTACCACACAATTTAAATACAAGATATTTTTAAAAGAATGGTC
TCACATTATAATTATTAAAATAAAAACATTTCCTGGGTATTTATAAAAAT
TCATGTCTATTGGTTATAACATTAACAATTCTTCTTTATCAACTTAGCTG
AAATACGGTCCTTCGGACGGTAAAATTGCGCAAGGGTTTCAAATATCGAA
ACACGCGAATCGCAAAGAAATTGACAAAAGAAATAATTGAATCATTATTA
AGTGTTTTAGGGTTTTAGGGTGGCGTCACAAGGTAAGAAAATTGAAAGTA
TTGTTCTTTTTTGTCGGACCCACGGGAAAATTTGGACCCACAAGCAATTT
TGACCCAAGAACCCACGAACCCACAAGCAATTTCAACCCACGTGATTTTT
TTTGGACCCACAAACCCACGAACCCACGAGATATTTTGACCCACGAACCC
ACGAGACATTTTAACCCACGAACACTCACAAGGGCACGGACCCACGATAC
GCACGTAACCCACGTAATTTAGCAGACTCAAACTGAATTACCATTTAATA
GGTAACACCTTTTAAAAGAAAATTGTTTAGAAAGAAAAAAATTGAAGTGG
CTCCACACACTTTCGGTTTATTCTTATGTAAGCTCACAAAAACAAAATAA
GGCACCTGCTTTTTTCCTTTTCACTCAAATAAATCGCGATTGTTTGTTTT
GATTTTCCTTATTAGGAAATTTAGTATTTCATTCTTGAGTATTTATATGA
TCACGATCATGATTTTTGGAGATGGAGGCTTAAAATTAATTAATTAAATT
CAATAATGTCTGAGATGATTCATTGTACTAGCTACGCACAGAAACCTTTT
GCTTTTTAGTTGAAAGACGAATGTCCGACCCCACTTAAAAATCAATCGGA
CATGTCCGACCACCTAAATATCGTTATTTCGAGCCCTGTTGGTGCCATAA
TAAGTTTGGGTGAAATTGATTGACAAATGATCGACATATATGCTTGACAT
ATATAATCTAAGTCAGAAATGAGAAACTGAGTCTCTGAAAGCCAAAAGAA
ACAATGTAAAGTGAAAGATAGGAAGGGAAAATAGGTTGTCGAGCCCTCTT
AGTATTCAGCGCAATGTTCTTCCTTGATGAGGGCACCCTTTTGGGTCATT
GTTAACTCATTTAAAATGGTGAACAGAGTTGCAGGATGATAAAGGTATGA
TATCAATTCACATCAAACGTTTTAAATTTTTGAACATCCTTATCTTGAAA
AGCAAAATGCTCGTTGCAAAATAGAAAAAGGTGGTTCAATCAGACATATA
TGATGGATATATAATATATGTTAAATATATATAAATGTTTTTATAAGTTT
CGAAAAGAATAGCGATTGAGTGTTCTTCAATTCTTTTTTTGACCATATAA
TAATTAACACAGAATAACATGGTATTCTCGGATGATTTTGGATTAATAAC
CCATCGTTTCATTGAAAACACTTCAAAATAGTCCCCACTACGTTCGGGCT
ATTTTGAAATGTTTTCAATGAACCTCGGGGTTATTAATCCCAAATCACCC
TCTGAAACCATGTTATTACTAGTACAAATAACTCAGTAAAATAAACAAAT
ATAGATTTGTGTCAAATTTTTTTTGAAATATTTTTTGTCATTATTATTAT
TGCTTCAATGCATAGTCTAGGCTATCAGATCCAATTTTTGGTTTTGCTCC
AAATTAGGCGCAACTCTGAAAAATTTGAGCCGGATTTGCTACGTTTTGAG
TTTGGAGCTGCCTTTCAGGGCTGCTAGAGCCCAGTCTACTTTAAATCTTT
CTTAAAAAATTGCTCAAATTTGCTGTCATAAAGCTGCTTAACACATTTCC
TCAAAGAAATTTGGCCCAAAAAAAGTCCTGGGCTGAAAGATGGCTGAAAA
TGGGTTTTGGAGCGTTTTTTTAAGCAGCCATGGAATTTGCGTTTAAGGTA
ACATGGGTTTTTTTGGTTTATTTGAAAGCACTAATTGGGTACTCCAAGAA
AATTAATAAAAACTTATGTGATCTTAGTTGCAGACTTGAAAAAATGCCTC
TTAATTAAAGTTGTAACAAAGAAAACAGCCAAAAAGAGCCAATTAAAGAC
ACAGTCTGCTTATACTTACTATATTTGCTATATCGTCTACGCAAAAACGT
TATTAAAAAAAGATGTGAACGCAATTTTTTTATGAGTGTATGGAAACCAT
GACAAAATGAAATTTCATTCACGCCCTTTTTAACTTTTTTCCCCTTCAAA
ATAGCTGACCTCAATTGGAGAATTAGAGAGCACCCATTGCCAAAACACCC
ACCGCCCCAGTATGATAAATAAATTAGGAGGACGTGTAATCTGCCACATG
GGTGACATCATGCACTCCATCGTGATGCGGCCAATTTCTTCTACTGCATT
TAAAAAAAATGATATCAATAGTTGTTTTGGCAAACGTGACGGTCTTTTGA
ATAACTAATTACTCCACAGTTGTTACCTAGAGACAAGATAATTTATCATG
TTTTTATTGGCAGAGGCCACCATTCATTACTTTCCCTCAGCCAATACAAA
GGGGATAAATTATCTTAGCCCAGGTCCCAGGTAACAGCTATGTTGTGAAA
GACAAATCTTAATTATATTTATATGGCAGTATCATTTAAAAAAATTATGT
TGGATTATTCAAAAGACCTTTGCATCATGCTAAACGACTATTGATTGGTT
ATCAATTAGTCATAACTGGACAAATTCATCCATCGTATCAAGTTGGAGAG
TCTGGATAAAAACTGGCCTCAAATAGACCTTAAGGCAGTAGGTAAACATG
AAATGATAATACCATAAGTTGGCTCAATGTCGACATCTCTCTTCCAATCC
CTACACATTTCTATAGAGAAAGCAATAAATGGGAAGGTCAGAATCACTGA
TATAGAAAAGTCAGAATCACTGATAGAAAAAGATATTTCTTTGCTGAGAA
ATATAGAAAGAAACATAGTTTCCGGTTTAGGAGTGGCGTTCATTTGAGGG
GGCGTTTGATAAATAATCAATAAAGGTCACTTTGATAAAGTGAATGAGAA
GCTTGTTTTGCCTTTTCATTGTCTTTCAGTTAAAATATATCATTTTAGTA
ATGTCAAAATGGGTAAAAATGAGTTTAGAGTATATACTGAAATAGTACAA
TTATATATCGGACGGAGGATCGAGACAAAAATACCATTAGATGCTAGAAA
TTTCCAACATGTTTCGGCCAGGGCCGTTTTCAAGGTAATAGTACAATTAT
TAACTCATATTGAAGTTTTCCTCCATATAATTCCTTGCAGCTACTTGTTT
CAAGTGAACGCCCCTCCTAAAGGGAAGGCGTTTATTCAAAGGGGCGTTTG
TTGAATATTATTTTTTCCTTTAGGGAGGAGCGTTTATTCAAGGGGGCCAT
TTAAAAGGAATACACCAAAAGTCCCAACTAAAGAAATTAAATCCCCACGT
TAATTTGTTTCTCCAACCTCTAAAACCTAAAAATTTCAAAATCCCAGCTG
GAAATTTTCAAACCAAAACACCAAACCCCCCCCACTATTCTAGGGAGGGA
TGCACGCTTTGATGACACCATACAAAGGGTCTATTGGATCACAATCTTTC
AATTGCATTTAAGATTAGTGTTCAGTTGATTCAAAGTTTGATTAGTTTGA
TAAGTTCGATTAACACTGGCTGGTTATATTAGAAGAAAGGTCTATCTATC
TAGTAGTCATTTAGGGCATCACATTGGTCTATTGAACCAAACTCTCCCAT
TCAATACAATCGATAATTATAGCTTGGATTTCTTTACAAGCCAATATTTT
CAATACAAAGCTGCTTTTTTACTTGTTATGCTTAGATATTTATCAAAAAA
TAGAAGTATGAAGAGAAAGTAGCAGTTTTATTTAATTAAAATTACTAAAT
GTAGCTGGGCCTTAAATTTCAAAACAACGGCTGAATAAAGTCTAAACCAA
GCTCTATCCGATCTATCAATCAAAACAAAGTTACCGTGAACCAAAATATT
GCTTGCGAAAACGAAAGTGACATACAGAAAACAGACATACAGACTACGGC
TATTAATATTAAGCAGTTATTGGACAAAGTGGACAAAGTCGAATCCAATA
TTTTTCATATTTGATGAGACTGCGTCCAAATAAATGGTTTATTATTCGTT
CATTGCTAAAATATTTCTCGTTTTCAAACATAATTCCAATTTACATGCTC
GTAAATCTGAAATTTTTTTTAAATATGTGGTCTTTCCTAAGCTTGTTTAC
CTGTTTGATAGCACATCAGATGTCTTGGATCAAGTTTGATAGTCGTTTAG
ACAATAACAACAGTGAATAACTGTTAATTCTTTAAAAGATGGTGTCAGAC
AGCTGTTGCCTAGAAAAAAATCACCTTGTTTGTACTGGCTGAGGATAAGT
TGTTTTTCATTAAAAAATCTAACATTTTAAGTATTCGTCTTCATTTTAGA
TATAAATAATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAACCC
AGGAAAGTCATTGGTTTCTCAGGTTTGATTTTCATCTCTTCTTTATTGTG
TAAAAATAAACTTAATATGTTTAGTTGATGTAATTGGACATTCTACTCAA
TAGATACTGCAATAATTATATGGAAGTTAACACATTTTAATATTTTGGGG
GGATTTAACCAAAAACGGCCAAATCTACCACATGAAACTTGAACCAAATA
TCACTAGTTTTATAATATTAATAGCCCATATTCCCAGGACTTCAAAAGGC
TTCAACAAATTTGTATAAAGGGTCAAATCATGTGTCAATAAAGATTGAAT
GATATCTAACCTCTTTTTCCGCTCTATTCTACAGTCAGAAGTATGAGTGG
CGATTATCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTT
TGCACGTGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAA
TTTTTCAAGTCAGTTTATTGAAATATTTTCTCTATATTGGGAATATTTAA
CGTTTATTGTATTGCTTTCTCCATTAAACTCATTCATTAGATACATTGAC
ATTATAATGCTAGAGCAAATGAACGTCCTGTCGAAGATTTAACCACTATT
CAAATATGTTTTAATAATTTGTTTACTTCAGAGATATGACAAAATGTTTC
ACTCATATTGCAGATGATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAG
CGGAAAGCTCTTCACAGCTGGTAAGTGAGTTTCAAGAGCCCTGGTGGTGG
AGATGCAAATCCAAATTTAACCGCCTCATATTGGTGAATTTTGCTTAGAA
GCTAAGAAAACTAAGCATAAAACTTTTTGATCACTCTTCTTTGCCAAAAA
GAAAAAAAAAACTGAGAAAAGGGCTTATATTATATTTTCTAATTCTAATG
ACCTTGTTGTTTCTCTGAAGATAACTGCCACTAAACAGGGCGGCCCTTGT
TCTTTCGGCTATTTATGGTCCTTGGAATGATTTAGTAGCCAATAAAATGC
TTTCTGCAAAGATTCGATTGTTTTTCCTGTTTTTATGAGAAAAAGTTAAT
TCTTCGACAGTTTTTTTCTGATTCTTTTGTCCTTCACCTCAAACTCTTTT
TAGTCAAATATCATCATTTATATAAAACTGTAGTTAAACTTGAAATAGAC
AGGTTTAGAAAGGTTTAGATACAGTTGTGTCAAGATTAATTTTGATTTTT
GTTTACACATCTGATGGTTTTTCTGTTTCATTTATTCATTTGTTCATTTT
ATATAGGTTTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCT
GATGGAGACGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGA
GATTCAAGATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAG
CGGCTGTCCATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCT
TGTGATATTCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGGTTTT
TATTATAATCTTTTTGTCATTGAATATCTCCCCCTCAAATTTTTTAAAGC
GTAGACGTAGCGTTAAACTGAATATCATCCTTTCTTTTAGGAAGTTGATC
TTGCATTGGCTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATG
GGAAGCCACAGGTACCTGTTGTCTCATCTTTTTTTCAAATACTTGTCAAG
CCCGAAAAAAGTACACAATATGTTCTTAACTGTTAAAATTTTTGATTTTC
TTTTTTTTTCTTCAGTTTAATTCGTGAATTAGCGTACACAGCACGTCCAA
TGTATGCAGATGAAGCGCAAAGGAACGGATTTGTCGGGTATACTCTTTGT
ATCATTACTATAATTCTTCTTTCAACCCTTGGAAAGAGCCTTGGTTTTCT
TTTAATCTTCGTTTGGCCTTCCTTTCTTTAAGACGTGTTTTCAAGGACAA
GGAAGAGATGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTCCA
AATCCCCTATCGCCGTCCAAACAACCAAATTACAGTTGAACTACGCCCGT
GATCATGGAGTCGATGAAGGTCTGGATTACATTGTAAGTATTCATTTCAT
CATTTTCATCACATTTTATGTCTCACGGTGCAATGCTAATATTTGCCCGT
TCAAATAGCGAAAGATTTACATCGACGAGCCTCTATCAATGGAGTAAAGC
GGATGGCTAAAAGCGAATCCTGATTCCTTTCCCAGACAAAATTCGGCCGG
ATTTTAGATGACAGATTTGAATATAGCGCTTTCTTTATTTCCACGTTGTA
CGTTTTTTTGAAATCTGGAAATAAATGTTACTTTCTATTTAGCGTTTGTG
TTAAAACCGCACGGACCGCGCGAGCTAGATGGGAAATAAGTGGTTTTGAA
TTCTACGCAAGATACGTACTCAGTTCTAGCCGTTCTCCAATATCATCCAA
CAGTAACCATGTTTAGGATTTGACTGCCTGTATGTTTTAACTTTTTCCGT
TTCTTACAGGCATCGTGGAACATGGGGTTGCTTCAGACACAAGATATGTT
GAAAGCGGCACAGGCTACCATGCAAAATGAGACAGCTTCGTTTGACGATA
TGCTTCCTCCATCAAAACTATGATCAGAAAAGGATAAGAAACTGGGGAAA
TGGTCGTACAACGCTAATGTTGACTTCTGTTGCATTCTCCCTGAATTAGA
TTTGGAAAATCGTTTTTAAGGAAGGATGGAAACAAACCGTACATAGATAA
CGTCTCTCATTAAATTTTACTTTTTCTTTTTGAACTCTTCACTGTAAGTC
TTTTCCAAAGCACCACTACTCTACTGTCCACATTTACATTCTTACATGCT
TATAAATATAATAATAAAATGTTTTTGAAATAATATATCTTTTTTAGTTC
ATGAATTTGATT

Coding sequence (CDS) from alignment at scaffold_50:131266..139727-

>TCONS_00069458 ID=TCONS_00069458|Name=TCONS_00069458|organism=Clytia hemisphaerica|type=CDS|length=7392bp|location=Sequence derived from alignment at scaffold_50:131266..139727- (Clytia hemisphaerica)
GCATCGTGGAACATGGGGTTGCTTCAGACACAAGATATGTTGAAAGCGGC
ACAGGCTACCATGCAAAATGAGACAGCTTCGTTTGACGATATGCTTCCTC
CATCAAAACTATGAACGTGTTTTCAAGGACAAGGAAGAGATGATGAAGAG
TGCTTTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCTATCGCCGTCC
AAACAACCAAATTACAGTTGAACTACGCCCGTGATCATGGAGTCGATGAA
GGTCTGGATTACATTTTTAATTCGTGAATTAGCGTACACAGCACGTCCAA
TGTATGCAGATGAAGCGCAAAGGAACGGATTTGTCGGGAAGTTGATCTTG
CATTGGCTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGA
AGCCACAGGTTTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTC
CTGATGGAGACGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAA
GAGATTCAAGATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCAT
AGCGGCTGTCCATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTG
CTTGTGATATTCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGAGA
TATGACAAAATGTTTCACTCATATTGCAGATGATCCACACGCAAGAGTTG
TTGTGTTGTCAGGAAGCGGAAAGCTCTTCACAGCTGTCAGAAGTATGAGT
GGCGATTATCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGT
TTTGCACGTGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAAC
AATTTTTCAAATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAAC
CCAGGAAAGTCATTGGTTTCTCAGGCATCGTGGAACATGGGGTTGCTTCA
GACACAAGATATGTTGAAAGCGGCACAGGCTACCATGCAAAATGAGACAG
CTTCGTTTGACGATATGCTTCCTCCATCAAAACTATGAACGTGTTTTCAA
GGACAAGGAAGAGATGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTG
CTTCCAAATCCCCTATCGCCGTCCAAACAACCAAATTACAGTTGAACTAC
GCCCGTGATCATGGAGTCGATGAAGGTCTGGATTACATTTTTAATTCGTG
AATTAGCGTACACAGCACGTCCAATGTATGCAGATGAAGCGCAAAGGAAC
GGATTTGTCGGGAAGTTGATCTTGCATTGGCTGCAGATATCGGTACCTTA
CAGCGCATGCCAAAGCTCATGGGAAGCCACAGGTTTGGATGTGATGAGTT
TTGCCAGTAGCTTGATGCCCACTCCTGATGGAGACGTCGGTCGAAAAGCC
TTTAGCATGCGAAAGATGATTAAAGAGATTCAAGATTCGTTGACAGTGAT
CGAAAAATGTCCACAGCCCGTCATAGCGGCTGTCCATTCAGCTTGTGTGG
GTGGTGGTGTGGATATGATTTGTGCTTGTGATATTCGGATGTCCACTGAT
GATGCTTGGTTTCAAATCAAGAGATATGACAAAATGTTTCACTCATATTG
CAGATGATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAAAGCTC
TTCACAGCTGTCAGAAGTATGAGTGGCGATTATCAATTTGAGACTTTGAA
TGTGGTTAAGCCAGCAGAAAATGTTTTGCACGTGGAGATGAATCGACCCA
ACAAAAGGAACGCCATGAACCAACAATTTTTCAAATGTTCAAAAACTCAC
TTAAAAGGTTGATAACGCAACAACCCAGGAAAGTCATTGGTTTCTCAGGC
ATCGTGGAACATGGGGTTGCTTCAGACACAAGATATGTTGAAAGCGGCAC
AGGCTACCATGCAAAATGAGACAGCTTCGTTTGACGATATGCTTCCTCCA
TCAAAACTATGAACGTGTTTTCAAGGACAAGGAAGAGATGATGAAGAGTG
CTTTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCTATCGCCGTCCAA
ACAACCAAATTACAGTTGAACTACGCCCGTGATCATGGAGTCGATGAAGG
TCTGGATTACATTTTTAATTCGTGAATTAGCGTACACAGCACGTCCAATG
TATGCAGATGAAGCGCAAAGGAACGGATTTGTCGGGAAGTTGATCTTGCA
TTGGCTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGAAG
CCACAGGTTTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCT
GATGGAGACGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGA
GATTCAAGATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAG
CGGCTGTCCATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCT
TGTGATATTCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGAGATA
TGACAAAATGTTTCACTCATATTGCAGATGATCCACACGCAAGAGTTGTT
GTGTTGTCAGGAAGCGGAAAGCTCTTCACAGCTGTCAGAAGTATGAGTGG
CGATTATCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTT
TGCACGTGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAA
TTTTTCAAATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAACCC
AGGAAAGTCATTGGTTTCTCAGGCATCGTGGAACATGGGGTTGCTTCAGA
CACAAGATATGTTGAAAGCGGCACAGGCTACCATGCAAAATGAGACAGCT
TCGTTTGACGATATGCTTCCTCCATCAAAACTATGAACGTGTTTTCAAGG
ACAAGGAAGAGATGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTGCT
TCCAAATCCCCTATCGCCGTCCAAACAACCAAATTACAGTTGAACTACGC
CCGTGATCATGGAGTCGATGAAGGTCTGGATTACATTTTTAATTCGTGAA
TTAGCGTACACAGCACGTCCAATGTATGCAGATGAAGCGCAAAGGAACGG
ATTTGTCGGGAAGTTGATCTTGCATTGGCTGCAGATATCGGTACCTTACA
GCGCATGCCAAAGCTCATGGGAAGCCACAGGTTTGGATGTGATGAGTTTT
GCCAGTAGCTTGATGCCCACTCCTGATGGAGACGTCGGTCGAAAAGCCTT
TAGCATGCGAAAGATGATTAAAGAGATTCAAGATTCGTTGACAGTGATCG
AAAAATGTCCACAGCCCGTCATAGCGGCTGTCCATTCAGCTTGTGTGGGT
GGTGGTGTGGATATGATTTGTGCTTGTGATATTCGGATGTCCACTGATGA
TGCTTGGTTTCAAATCAAGAGATATGACAAAATGTTTCACTCATATTGCA
GATGATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAAAGCTCTT
CACAGCTGTCAGAAGTATGAGTGGCGATTATCAATTTGAGACTTTGAATG
TGGTTAAGCCAGCAGAAAATGTTTTGCACGTGGAGATGAATCGACCCAAC
AAAAGGAACGCCATGAACCAACAATTTTTCAAATGTTCAAAAACTCACTT
AAAAGGTTGATAACGCAACAACCCAGGAAAGTCATTGGTTTCTCAGGCAT
CGTGGAACATGGGGTTGCTTCAGACACAAGATATGTTGAAAGCGGCACAG
GCTACCATGCAAAATGAGACAGCTTCGTTTGACGATATGCTTCCTCCATC
AAAACTATGAACGTGTTTTCAAGGACAAGGAAGAGATGATGAAGAGTGCT
TTTCGTCTGGCCAAACAAATTGCTTCCAAATCCCCTATCGCCGTCCAAAC
AACCAAATTACAGTTGAACTACGCCCGTGATCATGGAGTCGATGAAGGTC
TGGATTACATTTTTAATTCGTGAATTAGCGTACACAGCACGTCCAATGTA
TGCAGATGAAGCGCAAAGGAACGGATTTGTCGGGAAGTTGATCTTGCATT
GGCTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGAAGCC
ACAGGTTTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCTGA
TGGAGACGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGAGA
TTCAAGATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAGCG
GCTGTCCATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCTTG
TGATATTCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGAGATATG
ACAAAATGTTTCACTCATATTGCAGATGATCCACACGCAAGAGTTGTTGT
GTTGTCAGGAAGCGGAAAGCTCTTCACAGCTGTCAGAAGTATGAGTGGCG
ATTATCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTTTG
CACGTGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAATT
TTTCAAATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAACCCAG
GAAAGTCATTGGTTTCTCAGGCATCGTGGAACATGGGGTTGCTTCAGACA
CAAGATATGTTGAAAGCGGCACAGGCTACCATGCAAAATGAGACAGCTTC
GTTTGACGATATGCTTCCTCCATCAAAACTATGAACGTGTTTTCAAGGAC
AAGGAAGAGATGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTC
CAAATCCCCTATCGCCGTCCAAACAACCAAATTACAGTTGAACTACGCCC
GTGATCATGGAGTCGATGAAGGTCTGGATTACATTTTTAATTCGTGAATT
AGCGTACACAGCACGTCCAATGTATGCAGATGAAGCGCAAAGGAACGGAT
TTGTCGGGAAGTTGATCTTGCATTGGCTGCAGATATCGGTACCTTACAGC
GCATGCCAAAGCTCATGGGAAGCCACAGGTTTGGATGTGATGAGTTTTGC
CAGTAGCTTGATGCCCACTCCTGATGGAGACGTCGGTCGAAAAGCCTTTA
GCATGCGAAAGATGATTAAAGAGATTCAAGATTCGTTGACAGTGATCGAA
AAATGTCCACAGCCCGTCATAGCGGCTGTCCATTCAGCTTGTGTGGGTGG
TGGTGTGGATATGATTTGTGCTTGTGATATTCGGATGTCCACTGATGATG
CTTGGTTTCAAATCAAGAGATATGACAAAATGTTTCACTCATATTGCAGA
TGATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAAAGCTCTTCA
CAGCTGTCAGAAGTATGAGTGGCGATTATCAATTTGAGACTTTGAATGTG
GTTAAGCCAGCAGAAAATGTTTTGCACGTGGAGATGAATCGACCCAACAA
AAGGAACGCCATGAACCAACAATTTTTCAAATGTTCAAAAACTCACTTAA
AAGGTTGATAACGCAACAACCCAGGAAAGTCATTGGTTTCTCAGGCATCG
TGGAACATGGGGTTGCTTCAGACACAAGATATGTTGAAAGCGGCACAGGC
TACCATGCAAAATGAGACAGCTTCGTTTGACGATATGCTTCCTCCATCAA
AACTATGAACGTGTTTTCAAGGACAAGGAAGAGATGATGAAGAGTGCTTT
TCGTCTGGCCAAACAAATTGCTTCCAAATCCCCTATCGCCGTCCAAACAA
CCAAATTACAGTTGAACTACGCCCGTGATCATGGAGTCGATGAAGGTCTG
GATTACATTTTTAATTCGTGAATTAGCGTACACAGCACGTCCAATGTATG
CAGATGAAGCGCAAAGGAACGGATTTGTCGGGAAGTTGATCTTGCATTGG
CTGCAGATATCGGTACCTTACAGCGCATGCCAAAGCTCATGGGAAGCCAC
AGGTTTGGATGTGATGAGTTTTGCCAGTAGCTTGATGCCCACTCCTGATG
GAGACGTCGGTCGAAAAGCCTTTAGCATGCGAAAGATGATTAAAGAGATT
CAAGATTCGTTGACAGTGATCGAAAAATGTCCACAGCCCGTCATAGCGGC
TGTCCATTCAGCTTGTGTGGGTGGTGGTGTGGATATGATTTGTGCTTGTG
ATATTCGGATGTCCACTGATGATGCTTGGTTTCAAATCAAGAGATATGAC
AAAATGTTTCACTCATATTGCAGATGATCCACACGCAAGAGTTGTTGTGT
TGTCAGGAAGCGGAAAGCTCTTCACAGCTGTCAGAAGTATGAGTGGCGAT
TATCAATTTGAGACTTTGAATGTGGTTAAGCCAGCAGAAAATGTTTTGCA
CGTGGAGATGAATCGACCCAACAAAAGGAACGCCATGAACCAACAATTTT
TCAAATGTTCAAAAACTCACTTAAAAGGTTGATAACGCAACAACCCAGGA
AAGTCATTGGTTTCTCAGGCATCGTGGAACATGGGGTTGCTTCAGACACA
AGATATGTTGAAAGCGGCACAGGCTACCATGCAAAATGAGACAGCTTCGT
TTGACGATATGCTTCCTCCATCAAAACTATGAACGTGTTTTCAAGGACAA
GGAAGAGATGATGAAGAGTGCTTTTCGTCTGGCCAAACAAATTGCTTCCA
AATCCCCTATCGCCGTCCAAACAACCAAATTACAGTTGAACTACGCCCGT
GATCATGGAGTCGATGAAGGTCTGGATTACATTTTTAATTCGTGAATTAG
CGTACACAGCACGTCCAATGTATGCAGATGAAGCGCAAAGGAACGGATTT
GTCGGGAAGTTGATCTTGCATTGGCTGCAGATATCGGTACCTTACAGCGC
ATGCCAAAGCTCATGGGAAGCCACAGGTTTGGATGTGATGAGTTTTGCCA
GTAGCTTGATGCCCACTCCTGATGGAGACGTCGGTCGAAAAGCCTTTAGC
ATGCGAAAGATGATTAAAGAGATTCAAGATTCGTTGACAGTGATCGAAAA
ATGTCCACAGCCCGTCATAGCGGCTGTCCATTCAGCTTGTGTGGGTGGTG
GTGTGGATATGATTTGTGCTTGTGATATTCGGATGTCCACTGATGATGCT
TGGTTTCAAATCAAGAGATATGACAAAATGTTTCACTCATATTGCAGATG
ATCCACACGCAAGAGTTGTTGTGTTGTCAGGAAGCGGAAAGCTCTTCACA
GCTGTCAGAAGTATGAGTGGCGATTATCAATTTGAGACTTTGAATGTGGT
TAAGCCAGCAGAAAATGTTTTGCACGTGGAGATGAATCGACCCAACAAAA
GGAACGCCATGAACCAACAATTTTTCAAATGTTCAAAAACTCACTTAAAA
GGTTGATAACGCAACAACCCAGGAAAGTCATTGGTTTCTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043290XLOC_043290Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069458-exon-scaffold_50-1575043694:139622..139727TCONS_00069458-exon-scaffold_50-1575043694:139622..139727Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:134156..134228TCONS_00069458-exon-scaffold_50-1575043694:134156..134228Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:133720..133843TCONS_00069458-exon-scaffold_50-1575043694:133720..133843Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:133458..133546TCONS_00069458-exon-scaffold_50-1575043694:133458..133546Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:132683..132921TCONS_00069458-exon-scaffold_50-1575043694:132683..132921Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:132517..132587TCONS_00069458-exon-scaffold_50-1575043694:132517..132587Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:132341..132412TCONS_00069458-exon-scaffold_50-1575043694:132341..132412Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:132095..132245TCONS_00069458-exon-scaffold_50-1575043694:132095..132245Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1575043694:131266..131668TCONS_00069458-exon-scaffold_50-1575043694:131266..131668Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:139622..139727TCONS_00069458-exon-scaffold_50-1510915933:139622..139727Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:134156..134228TCONS_00069458-exon-scaffold_50-1510915933:134156..134228Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:133720..133843TCONS_00069458-exon-scaffold_50-1510915933:133720..133843Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:133458..133546TCONS_00069458-exon-scaffold_50-1510915933:133458..133546Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:132683..132921TCONS_00069458-exon-scaffold_50-1510915933:132683..132921Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:132517..132587TCONS_00069458-exon-scaffold_50-1510915933:132517..132587Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:132341..132412TCONS_00069458-exon-scaffold_50-1510915933:132341..132412Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:132095..132245TCONS_00069458-exon-scaffold_50-1510915933:132095..132245Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1510915933:131266..131668TCONS_00069458-exon-scaffold_50-1510915933:131266..131668Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:139622..139727TCONS_00069458-exon-scaffold_50-1491911889:139622..139727Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:134156..134228TCONS_00069458-exon-scaffold_50-1491911889:134156..134228Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:133720..133843TCONS_00069458-exon-scaffold_50-1491911889:133720..133843Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:133458..133546TCONS_00069458-exon-scaffold_50-1491911889:133458..133546Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:132683..132921TCONS_00069458-exon-scaffold_50-1491911889:132683..132921Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:132517..132587TCONS_00069458-exon-scaffold_50-1491911889:132517..132587Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:132341..132412TCONS_00069458-exon-scaffold_50-1491911889:132341..132412Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:132095..132245TCONS_00069458-exon-scaffold_50-1491911889:132095..132245Clytia hemisphaericaexon
TCONS_00069458-exon-scaffold_50-1491911889:131266..131668TCONS_00069458-exon-scaffold_50-1491911889:131266..131668Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069458-proteinTCONS_00069458-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:131266..139727 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.4077	89.1035	80.3035	71.5755	25.9528	19.0892	38.5197	43.8464	94.8189	92.7277	153.925	119.724	100.685	113.125	100.007	113.679	97.5354	102.459	66.7656	73.9917	67.5309	68.8539	68.3784	69.6681	79.9262	79.1702	114.162	113.114	91.7401	81.7089
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014748Crontonase_C
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
[Close]
BLAST of TCONS_00069458 vs. Swiss-Prot (Human)
Match: ECH1 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 1.075e-107
Identity = 147/267 (55.06%), Postives = 205/267 (76.78%), Query Frame = 2 
Query:  197 DYQFETLNVVKPAENVLHVEMNRPNKRNAMNQQFFKDMTKCFTHIADDPHARVVVLSGSGKLFTAGLDVMSFASSLMPTPDGDVGRKAFSMRKMIKEIQDSLTVIEKCPQPVIAAVHSACVGGGVDMICACDIRMSTDDAWFQIKEVDLALAADIGTLQRMPKLMGSHSLIRELAYTARPMYADEAQRNGFVGRVFKDKEEMMKSAFRLAKQIASKSPIAVQTTKLQLNYARDHGVDEGLDYIASWNMGLLQTQDMLKAAQATMQNE 997
            D+ +E+L V    ++VLHV++NRPNKRNAMN+ F+++M +CF  I+ D   R VV+SG+GK+FTAG+D+M  AS ++     DV R ++ +R +I   Q++  VIE+CP+PVIAAVH  C+GGGVD++ ACDIR    DA+FQ+KEVD+ LAAD+GTLQR+PK++G+ SL+ ELA+TAR M ADEA  +G V RVF DKE M+ +A  LA +I+SKSP+AVQ+TK+ L Y+RDH V E L+Y+ASWNM +LQTQD++K+ QAT +N+
Sbjct:   52 DHSYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTENK 318
The following BLAST results are available for this feature:
BLAST of TCONS_00069458 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECH11.075e-10755.06Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
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