TCONS_00069458-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00069458-protein
Unique NameTCONS_00069458-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length307

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00069458-protein ID=TCONS_00069458-protein|Name=TCONS_00069458-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
MFKNSLKRLITQQPRKVIGFSVRSMSGDYQFETLNVVKPAENVLHVEMNR
PNKRNAMNQQFFKDMTKCFTHIADDPHARVVVLSGSGKLFTAGLDVMSFA
SSLMPTPDGDVGRKAFSMRKMIKEIQDSLTVIEKCPQPVIAAVHSACVGG
GVDMICACDIRMSTDDAWFQIKEVDLALAADIGTLQRMPKLMGSHSLIRE
LAYTARPMYADEAQRNGFVGRVFKDKEEMMKSAFRLAKQIASKSPIAVQT
TKLQLNYARDHGVDEGLDYIASWNMGLLQTQDMLKAAQATMQNETASFDD
MLPPSKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043290XLOC_043290Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00069458TCONS_00069458Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014748Crontonase_C
IPR001753Crotonase_core_superfam
IPR029045ClpP/crotonase-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.226.10coord: 27..250
e-value: 3.7E-54
score: 182.9
NoneNo IPR availableCDDcd06558crotonase-likecoord: 41..240
e-value: 3.31431E-59
score: 189.309
IPR014748Crontonase, C-terminalGENE3D1.10.12.10coord: 251..301
e-value: 4.5E-11
score: 42.5
IPR001753Crotonase superfamilyPFAMPF00378ECH_1coord: 41..260
e-value: 5.3E-41
score: 140.5
IPR029045ClpP/crotonase-like domainSUPERFAMILY52096ClpP/crotonasecoord: 37..299

Blast
[Close]
BLAST of TCONS_00069458-protein vs. Swiss-Prot (Human)
Match: ECH1 (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2)

HSP 1 Score: 326.25 bits (835), Expect = 1.114e-111
Identity = 147/267 (55.06%), Postives = 205/267 (76.78%), Query Frame = 0 
Query:   28 DYQFETLNVVKPAENVLHVEMNRPNKRNAMNQQFFKDMTKCFTHIADDPHARVVVLSGSGKLFTAGLDVMSFASSLMPTPDGDVGRKAFSMRKMIKEIQDSLTVIEKCPQPVIAAVHSACVGGGVDMICACDIRMSTDDAWFQIKEVDLALAADIGTLQRMPKLMGSHSLIRELAYTARPMYADEAQRNGFVGRVFKDKEEMMKSAFRLAKQIASKSPIAVQTTKLQLNYARDHGVDEGLDYIASWNMGLLQTQDMLKAAQATMQNE 294
            D+ +E+L V    ++VLHV++NRPNKRNAMN+ F+++M +CF  I+ D   R VV+SG+GK+FTAG+D+M  AS ++     DV R ++ +R +I   Q++  VIE+CP+PVIAAVH  C+GGGVD++ ACDIR    DA+FQ+KEVD+ LAAD+GTLQR+PK++G+ SL+ ELA+TAR M ADEA  +G V RVF DKE M+ +A  LA +I+SKSP+AVQ+TK+ L Y+RDH V E L+Y+ASWNM +LQTQD++K+ QAT +N+
Sbjct:   52 DHSYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTENK 318
The following BLAST results are available for this feature:
BLAST of TCONS_00069458-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ECH11.114e-11155.06Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
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