TCONS_00068746 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068746
Unique NameTCONS_00068746
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2277

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068746 ID=TCONS_00068746|Name=TCONS_00068746|organism=Clytia hemisphaerica|type=transcript|length=2277bp
GGAGATTGTTCgttgaaagaaattttgctgTTATGTCTCTCGTCTGGTAA
ACTTTTGCGGTGTGTAGAGTaCCGGACTGACCGTTTCAAAAAAAGTCCGG
AGAAAAGAAATGAGTTTCCCGAGGAAAGAACCTTCAAGCGTTATCGTCAC
CAAACTCAAGAAACATGCAATGCACatcgaaaattttcttgGAAAAGGAG
CTTGGGGAAATGTATACGCATGTCGTAAAAGTTTTGGAGGGTCGAAAAAG
TACGCGGCCAAGGTGGTGGAATTTGGGAATGACCTCGGTGTGAAATGGCA
AACTGAAAACGAGATTGAGatctTGAAAGAAGTTGGTAACCATGGTAATA
TCGTTGGTTTCCATGGCGTTGTCAGGGACACGAGCAGCATTGCCATGATC
TTGGAGTTTATTCCCGGGGGATCATTTTTGGAAGGCTTACTAAATTGGCC
GGGCTTCAATGAGAATGGCATGAAAATAATTGCCAAACAATTATTGGAAG
CTCTGAAATTTTGTCACTCAAATCGAATCATTCATAGGGACGTTTGTCCT
GAAAACATATTATGGTTTAATGTGCCAACCGTTAAAAGACCTGACGTCAC
TCCAGTACTGAAGTTGATCGATTTCAATTTATCTCGAAAAGTTCCGGAAG
ATTCGACGTTTTTACGAGCGGACGCGCTTGGTAACCCATCTTATATGGCT
CCCGAATGCCTGTCGGATGAACCGATCGCCACCTTCTCTGGAGATATCTG
GAGTGTTGGCGTTCTCATGTTCCTCTTACAGTCTGGTTACCCACCCTTCT
TCAACGATAATTACAATCACCTACTTAAAAACATCCAAGAAGCCAACTTC
GTGTTTCCACAACATCTCTGGAGTCACGTGACCGATGACGGGAAAGCTAT
CATTCAAGAAATTCTTCAACAAGAGCCAGAGAATCGACCGACAGCCAGTG
AATTACTGACGCACCGCTGGTTCCGTACCCGAATCAGTACGGCAACCCCG
ATCATAATCAAAACCACACCGATCAACCAAGCAGGCAGATACCTCTTTAG
AACTCAAAACAACTCATCTACTCTCGAAGAAAAGATATGGGCTGGTCAGA
AAAGATTAAAAGGATTCCTCCGACATCTAAACGAGAAAAAGACGAGGGCG
AACCATCGGAAATATTCCTTAGTTTTCAAAGAGCGACAGGCCTTCATTCC
GGAATCTCACATGATCACCATACCAACAAGCGCGCTCATCAATGAGGTCG
ATTTCTATCAACAAAAAGTCGCCGCAACCGCTTCCAAAACTCTCGAAAAA
TTGAACAATAGTATTGAAAGTCTAGAATTCAAAAGACAAAGTTTTCATTG
GTAGTTTGAGCCCCTTAACGTACAGAAGGATTGTATGTAATAAAAACTAA
ACCCCTGTCGCAGAAAATTACGAATAACTCTGGAATAgctttttgagaca
ggggtgtagacGTATTTAGCCTAGTaaagaaaaacttaattttttagttA
CATGCTTCTCATAATAATCATTTAATTAGTGGTATGTCGCACCCAGTTTT
TTAAACCAAAACAGCAAAGTTAATTGTGTGTCTAAGATGATTATTTAAAG
CTGGGTGTGGCCATGCTATAGGTAATAATTTATAACGGAAAAATAGTAGA
GTAGAAAAAAATACTTATACATTCAAAACGgaaaaaactttgtaaatatt
ttcttgtatagagtatattatatatttttaatccCATGTGTATATTAGTT
GTAACACCGAATTAGTTCTTGAAAATATAATAGTTTATTTTTTGGGCTCA
TGTttattttgagcttttttgatTCATGTGTGAAAGGCGAAAGACTCGTT
TTTCTCGCTCTCTTACGCGAGTTACGATTACCATAGCTAAAGATAACATC
TTTTTTGATGAATATTCAAGTTTGTTACGAATTGATTATCTATTTTAACT
CGCAATTTCTAGTGTGTGACCCTCTCAATATTTTGCTTTCATCTTGCGAA
TAGAGTGACTTGTCTGGACCGCTTTGCAATTTTTTTAGATGTAAAAGGTT
TCGAAAATAGAAAACTCTTTCCCGAGTGTCCGAGATATACCAAGATGTCC
GTTATCCGCGGAGAGCAAGAAAAGAATCGTGTGATAGACTGAACCATCTT
TAAAATtgattgatttcttttttataaataggttTATAATAAGTGTATTT
TGAGTGGATTAATATGATGTTTAAAATATAATCTTTGTAAATAACAAAAT
tccaaacttttattttttgaccCTACC
Run BLAST on NCBI

transcript from alignment at scaffold_49:118071..129990+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068746 ID=TCONS_00068746|Name=TCONS_00068746|organism=Clytia hemisphaerica|type=transcript|length=11920bp|location=Sequence derived from alignment at scaffold_49:118071..129990+ (Clytia hemisphaerica)
GGAGATTGTTCgttgaaagaaattttgctgTTATGTCTCTCGTCTGGTAA
ACTTTTGCGGTGTGTAGAGTGTAAGCATCTATACCAGTTGAATATATTTT
AACAAATATGGCAAATCAAGAACTGTGTTTaagttttcgttttttaattC
CATTCGTAATCTTATCTCATAGGCGAGTTAACTTATCGACGGAATCCATT
ACAAATCAAAACCGCTTATCCTACATAAAGTGATCAAATGTTTTAGTTTC
TACGCCCATGAAAAGCTCTTTTTGGTGAATAGATTTATATAGTCATTTTT
gctatttcatatttttgatctcatttctttgaaaagttcgtgaatttttg
aaatcctttaaaatttgatatttatattAACACTGCAATTTGTGCATCTG
AGCTTTATAAAGGTCATTTCTTTCTGCAAACGAAATTTTCTACCTTGTAC
GTTACCTTTGATCGCATCGTCGAGTGGTATAAAATCGATAGTTGCCTTGT
TTTATGAAATGTATAAGTCACTACTCCCCGAGTCGGGATtgggtaatttt
cgcgcctgctgccttccttagatgtggtagccGTTTCTCAGACCCTCTCT
CTGGAAAGAATTCGGTTTAAGCAGGTAATCGGttgacattgaaaaaaatt
catcttAGAAGGCTTCGTCGCAAAAAGCAATTTCTTGAGAAGGACATACA
AATTAATTATGACTGATTGGATTACATTAAATATGCCCGCTATTTCACTT
AAACGTGCTTATCCTCTTTGTGAACCGAAAATGCCGACTTTCATCCCTAG
TCCTTTTTTAGAACATATCAAAAGCCGGGTAAAAATTGGATTTAAGTCTA
TTTCTAGCTGGGGTTTCAGCCCCAAAGATTGAGTGCTACCCTTATATATA
TAAGGTCATTTTAGGAGGGAAGACACTCTTCCCCGTTTCTGTTTTCCTCT
AACTAGGCCTATATTGGATTACTTCTACTTCGCATATAAGATAAATAAAA
CGGAGAAATTTAAGATGGTATGAAATATCAAATTCGAACCAGGGTGCTAT
TCTCTTTCGGATTCATCACttctcaaaaaaaagtcaattaGGATTTAATA
AGTGGATAGTACGAACTATGGGATaaacaaaaaaggttaagaaatttCTC
GGTGCTATGTTAAAATGCCTGGATGTCAAAGAAAAGGTTTTTGAGGATAT
TGAGTCAAGTGGACGCGGACATAAATTTATTGCTTTATTGCAGTGCGGTC
TGTGTTCGTACGGATGAGCGGAACTTTGAGGTATGTGTCACTATATCTGA
ATCACCCACTAATCAATGTTGGCAGCCCGTGTTTTAAAGTTTATATTGTG
TTGCAACAACGATCTGGGAAGAGTTGGACTGAGTATTAACGAACAGGAAA
TTGTGAAATTGAAGAATCGCCTCAATTTGCACACGTCACGTGTGATGGTT
TGACGTGTTCTgcgtttgatgacgtcagcagattCGTTTTTATTTAATAG
CGTATGTTTGGCATAACTAGCCCTAGATTTTAAACTCTCGTTCAGTTTGT
TGTTTTGGATTTCTTCTTCTGGTTTGCATAACTTCAAACCGAAAGAAGAA
CTTATTTTTTCGTTGGGTTTCCCGACTTCTAAGCGGTGTCATTGAGACTA
ATGCGTCGATCTTATAATGAAAACAAGAAATTCAATCGAAATTGAATATG
CATGTCGATTCCCGTAGTGCGGGCGCGCCATCAATATTTATTTTCCTCCA
AAAACATTTGCTTCTGAAATATGCATGAAGAAATTGAATCCGTTTGAATT
GGGTTTTTGAATAATCGGGGAATGATTGCTCATTCGATACTGAATATCTA
TTGCTCTCTTATCAAATGGCGTTAGAGAAAATCTTGGTGTGAATTTAAGT
TGTATTAGAATGTCACCTCAAAACTGGCTAAGAAAATCACTTCGTGCTAG
TTAGAGAAAACTTTGGTGTGAATTTAAGTTGTATTTGAGTGTCACCTCAA
AACTGGCTAAGAAAATTACTTCGTgctaatttgaatattttttgatgtta
cttaatctttcttttttattatagaCCGGACTGACCGTTTCAAAAAAAGT
CCGGAGAAAAGAAATGAGTTTCCCGAGGAAAGAACCTTCAAGCGTTATCG
TCACCAAACTCAAGAAACATGCAATGCACatcgaaaattttcttggtAAG
ATTATTTTCTCCTTGACCCTGTCTCGAAGTAATGATTTTGTACAGTTTCT
GTAGTACTATGTATTCGAGTATAGGAGTGATTCGAAAGTTGCGTAAAACA
TCAGAATTTATGAGcaatagattttaaaattttattgcaGTGTTTtgcat
ttttgcaattttaatcTCAAAGAATAGTTTTGAGGATAGGTCACTCATAA
TGACCGTTACTTGCaactattttacaaatctaaaATCCAAACTGGATTAA
TTTTCTTTAAGCCGTGAGATTAGATCGGTTCCCGACTGAATAATGCATAG
TTAACGGCCGATCAGTCTATTCTTTAATTCACAGAAAGTTTTTAGTTAAT
CGCCTGAAGGCTCGGCTGACGTCAATAGGATATATATTTAGAAGAGTTTA
GTTTTCAAAACCCATGCATGCCGGTTCACGCAGTGTTTGGAATCCCTGTT
AAGTTCGTTACATTTGAACTTGCTTTAATTAACCCCTCACAGTTACTGAT
GGACTTTGAAATTTATACCCACAGATATTATATAACTGCTCTTAGATTTC
CCGTGGAAGTGTATCCAGTTTTGAAGTCGATTAGTCCGGCATGTTGTTTA
CCAATTTATCTTAGGTTTTCGAACCTTTGAATTTCAAAGCATTCGAATCG
TGCTGTTGACgaacaaaattgaaaacaagatgacATAGACTAGTCAGCTC
TAAATTTGGACACGCTTCCTATATACGGATAGCCCTATCCAGTCAAATAG
TTAAGATCAGTGTTTATACTTTATTGGTACTAAAAGCTATGGTGTTTCAT
GATATTGTGTAACTTAAAACAAATGCGTAACATTGAGTTTTgttaagtaa
aaagtaaaaacttagcattataaaattataaaagcTAGGTCATTTGGATT
TTACATTGTTTAACTTTAAGTACATTTGTGTACATTCGCGATTTGCGATA
TTGAATTTTTAGTTCAACCAAATTGTTAAACTAAGGGACTGAAGCATCCA
TACTAAATCCTTGTTGGTATGGCGCAAATCTACTGGAATAAAAAATCATC
TTTCCACAAATTGCTTTAAAATTTGCTACGCTACTATCGCCTACTTTTTA
CCAAAAAGTCAATTTCCGATTTAAAGATCGTGGTATATGTTAATCTTAAA
GCACTTAGAGACGTGACTTAGCCAATTCTAAATAATTGATTTCAAAGACT
CAAAGGAGAAGGAAAAATTCTGGGATGCTACGGATAAGAGTGAAGGAAAA
AGGGTAATAATCCTGAGGCATTTTGATTTCTTAATCAACAAACAGACGAT
AAGCTCTAATTGTAATGGCCTGCTCATTAAGAAGCATGATTATTTTTGTA
GATTAGCTTCCCGCTGAGATGATTTATCTTAAAGTCTCAAACCTTCGAAT
GCGTTCAGCCTATTTCATTTTTGCAAACATCGGGGGCTCATAAACATAGA
TTAAGGTTTTCAAAAGAAAGGGGAGGAGATGTAAGTCTGGGAATTACGTG
TTGCAAAATAAGCGTTGGAcgtttttaaggcttgaaaGCTTAGTAAGAAG
CGTTGAACGTCTCTAGGGGTTCAAAGCTTAATCAAGAAGAGTTGGCCGTC
TTTCGCACCAGTTCTAATGATGGATTAAATATTTTGGCTGTCAGCCGTTG
GCAGATGACCAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTCTGTAGTACTATGTATTCGAGTGTAGGAGTGATTCGAA
AGTTGCGTAAAACATCAGAATTTATGAGcaatagattttaaaattttatt
gcaGTGTTTtgcatttttgcaattttaatcTCAAAGAATAGTTTTGAGGA
TAGGTCACTCATAATGACCGTTACTTGCaactattttacaaatctaaaAT
CCAAACTGGATTAATTTTCTTTAAGCCGTGAGATTAGATCGGTTCCCGAC
TGAATAATGCATAGTTAACGGCCGATCAGTCTATTCTTTAATTCACAGAA
AGTTTTTAGTTAATCGCCTGAAGGCTCGGCTGACGTCAATAGGATATATA
TTTAGAAGAGTTTAGTTTTCAAAACCCATGCATGCCGGTTCACGCAGTGT
TTGGAATCCCTGTTAAGTTCGTTACATTTGAACTTGCTTTAATTAACCCC
TCACAGTTACTGATGGACTTTGAAATTTATACCCACAGATATTATATAAC
TGCTCTTAGATTTCCCGTGGAAGTGTATCCAGTTTTGAAGTCGATTAGTC
CGGCATGTTGTTTACCAATTTATCTTAGGTTTTCGAACCTTTGAATTTCA
AAGCATTCGAATCGTGCTGTTGACgaacaaaattgaaaacaagatgacAT
AGACTAGTCAGCTCTAAATTTGGACACGCTTCCTATATACGGATAGCCCT
ATCCAGTCAAATAGTTAAGATCAGTGTTTATACTTTATTGGTACTAAAAG
CTATGGTGTTTCATGATATTGTGTAACTTAAAACAAATGCGTAACATTGA
GTTTTgttaagtaaaaagtaaaaacttagcattataaaattataaaagcT
AGGTCATTTGGATTTTACATTGTTTAACTTTAAGTACATTTGTGTACATT
CGCGATTTGCGATATTGAATTTTTAGTTCAACCAAATTGTTAAACTAAGG
GACTGAAGCATCCATACTAAATCCTTGTTGGTATGGCGCAAATCTACTGG
AATAAAAAATCATCTTTCCACAAATTGCTTTAAAATTTGCTACGCTACTA
TCGCCTACTTTTTACCAAAAAGTCAATTTCCGATTTAAAGATCGTGGTAT
ATGTTAATCTTAAAGCACTTAGAGACGTGACTTAGCCAATTCTAAATAAT
TGATTTCAAAGACTCAAAGGAGAAGGAAAAATTCTGGGATGCTACGGATA
AGAGTGAAGGAAAAAGGGTAATAATCCTGAGGCATTTTGATTTCTTAATC
AACAAACAGACGATAAGCTCTAATTGTAATGGCCTGCTCATTAAGAAGCA
TGATTATTTTTGTAGATTAGCTTCCCGCTGAGATGATTTATCTTAAAGTC
TCAAACCTTCGAATGCATTCAGCCTATTTCATTTTTGCAAACATCGGGGG
CTCATAAACATAGATTAAGGTTTTCAAAAGAAAGGGGAGGAGATGAAAGT
CTGGGAATTACGTGTTGCAAAATAAGCGTTGGAcgtttttaaggcttgaa
aGTTCAATTAAGAAGCGTTGGACGTCTCTAGGGGTTCAAAGCTTAATCAA
GAAGAGTTGGCCGTCTTTCGCACCAGTTCTAATGATGGATTAAATCTTTT
GGCTGTCAGCCATTGGCAGATGACCAATAACGTCAGATATTCCTTGGTAA
ACTGTATACGATGACCTCAACAAGGAACCCTAAAATAGACATCAGCACGT
ATTATCCTTTGGAAGTAAAGCTTTAGAATGTCGATGCAgagatttcattg
aaaatggaACACTCTCCTGTTGACAACGGCATCAGCAAGTTTATCTGCTC
TGTACTAGAAAATGATTGTTTAGGGAACCTCAATACCAATGACCTCAACA
AGGAACCCTAAAATAGACAGGACAACCCTATTATGTTAAATTTAGCTGTG
CATCAGACATCCGTAGcatcaattttcttttcacCTTAAAgaagaaatgt
tttcttttttcgttGCCTTCCCCATTTTTCCAGAGCAGATTTCAGCAACA
TCCAATCTTCTTGCTGCAGAATAGTGACGATAGGTGTACAAAAATTGCTA
GAGGAAAATTCTTTACCCTTGAGGAAAGTTAGAAAATCATCAATTGAAAC
CAGAGGGATTACTATCTAGAAATTGAGGCCGacattgattttgttttatt
taccATACAGAAAATTATTTGTAGTCAGGGGAAGATCATTGTTTTCACAA
AGTGCTTACGTCACATGTCGACAACCATCTCAGGAAAGTTAGATAAGAGA
TTTGGGAGATGATACCATGCCTAATAAGCCATTAGAATTATGGGATAAGC
ATACTATGGTATGCGGTGTCGAGGTTCCCTAAGCAATCATTTTCTAGTAC
AGAGTAGATAAACTTGCCGATGCCGTTGTCAACAGGAGAGTGCtccattt
tcaatgaaatctcTGCAtcgacattttaaagctttactTCCAAAGGATAA
TATGTGGTGATGTCTCCTTTGCCTATCACAAAACTGCGAAACCTTATCAT
AACGGCTGGTTAATACGTCATCAATTAAATGATAAACTTTGATTAAATTA
GGGTTCGATCTTATCCTTGATTCGTCTATACTACTCGTGCTGTGTACCCT
CTTCTTACTTaaagtaaaaattcaaaacttcgaataaattttaaaacttt
ctaaGACTTATTACAAAACTTTACCACAGTCACAAAAGGATTTGAATTAT
GCTTGcaacatcaataaattacaaagatttttctttgaaagaaaatgtcg
gCTGATTATTCATCAAGAAAGTAAACCGTTAGATCCTTATCTAAAGGGAT
GCCATCACACAAGATTTGAGGGCTTGATAAGAGAAGAAACAACGATGACT
TGGAAATTCAAATGCAAAGAACTTAACGTGAAGTTTTATGGGGAAACTAA
TCACTTCACGGTAACTCGAGATAAGATTTGACAGGGTTTTAATAAAGTAG
AACTCCCAGACAACCCAATACTGAGTTCTAGTTTCAAATAGAAGTAACTG
TGCTAACTATGAATATTTCGCTGTTCGGGAAATTGAAATTCACAGCTCCT
GCTGGTTCTTTACGTCATAAGTCGATTTTGCTTTCCAATAAATTCCCTTT
GCTTTCACCCGAGTGTAATGACCTGTATCACATTTTCGGGAGAGTGCAAT
TGAGCTATTTCAGAAAAATGTTATACCCCCTTTTTTGAGGAGGTCGTTTT
GGGAAAGGTGACCccttagattttttttcaatttttcggtaCCCCCTTGG
CCAAtcctggatttttacactcaaAAAACTAGACCCATCCGTTAGATATT
TAATTTTCCAGACCACCTTGGGCGTCACATCTCCTCAACTTAGGGGTTAC
AGACTATTTATCGGCTAACTTTTATCCACTAAAGATTCTCAGCTCTACAG
CTCTAAATTGCCGCCTTTTCTAAGgttgtttttaaaagaatcgAACACTN
ATTTATCGGCTAACTTTTATCCACTAAAGATTCTCAGCTCTACAGCTCTA
AATTGCCGCCTTTTTTAAGGTTCTTTTTAAAAGAATCGAACACGAAACAC
GAAAGTTACTTATCACTATATTGTAGAGTTAAGTACCGTAAGTTCATTGA
GTCCATTGTCTGAATACCAGCCTAAAAGCGTTGTGAAAGCACCATTGgaa
gaaaaaagtaaatttagcTAGCGCTAGTTTCACAGCTTGTAAAAAGTACC
CACTGTTTAGGTTGGAACCTTCGCtgactttctttcttttttttctttga
ctATTCCCTTGATCTCCTATGGCCGCTAAACTTCACGGTAACGCGATTCT
GTTATTCTGTTAAAAACCTCCATTCATTTCATTCTCAAACGTGTAGAAAT
GAAATAGAAAATCTCTGCATGCTGATTGGGGGCCAATAAACAATCGCCAT
CAAACTCAGCGgatcaataaaaagaaatcgGGAGGTTGTAAGATGTCAGC
TTAAAAAGACATCAAAAACTtctgaaacttttttcataagaacgtGTTCT
ACTATtcgctaaaatataaaaacaagcTTGGCACAAAATCTGGTAATCGT
ACCAAGATTATTATTTTCAATCCCAACTCTAAATCCCCATATATTTTCTT
TGAACACGTTTTCGGATTAATTCAGCGTCATTTTACTGATGAAAGAATcc
ctttttaggtttttatatATTCTTACAATAAATAAGAAATCGTCATCTAG
ATAAAGATCTGTATTGTTATGCGAATGAGAATTAATTTCAGGAAAATAGG
TTGATATAACAGAGAGTAGTTCAGAAGGTTAGCCAGTTATTTAATCGAAG
TTCAGCCTCTCACATCTCAAAGGAacaaagttttatataatttgactgGT
ACTATCTGCGTGAAGAAGATGAGAGAAAatctaaaaggattttcaaattt
cgatCCCATCTTAGGAAAAGGAGCTTGGGGAAATGTATACGCATGTCGTA
AAAGTTTTGGAGGGTCGAAAAAGTACGCGGCCAAGGTGGTGGAATTTGGG
AATGACCTCGGTGTGAAATGGCAAACTGAAAACGAGATTGAGGTGAGTAC
AAAATTAAATAcattgaattttattatttttcctgtttttttctAGATTC
AAAACTCACTATTTGAGCTCGTAGGTTTTGTAAGTGGTTTTAAATCggat
tccccccccccccaaacccTTGTCCAATTtcgataaaaattatttttttc
ttttttttttttaaattaaaaacccCCTATTTGAGCTCGTAGGTTTTGTA
AGTGGTTTTAAATCggattccccccccccccacacacATTGTACAAATTC
Agtcaaaatgatatttttcaattgtaatcaacattttctgtttttgccta
cggtatgctctctctctctctgaaAGCGGATTAAAATATTGATGATAGTT
TTTTCATGCCTGACCTGAGGTAACTTTAGgttgtttttgattttcttttc
aactaAAGGTAAAGAtgtatttttaagttttataaACCGCAAAAGATATT
TTCCATCCCTAAGCCTCGAAACTTATATAAAATGCCAAAAATTTCGAAAC
GTTTCTTTTCTTACCTATGTTTTCCCTTTGATACAAATTAttcgtatttt
tctttttcagatctTGAAAGAAGTTGGTAACCATGGTAATATCGTTGGTT
TCCATGGCGTTGTCAGGGACACGAGCAGCATTGCCATGATCTTGGAGTTT
ATTCCCGGGGGATCATTTTTGGAAGGCTTACTAAATTGGCCGGGCTTCAA
TGAGAATGGCATGAAAATAATTGCCAAACAATTATTGGAAGCTCTGAAAT
TTTGTCACTCAAATCGAATCATTCATAGGGTATGTACACttctattgttt
taactttgagTTTGTCCATGCCCGTATCTACCACGCATTGCGTATTATTT
TCGACATGTACTTGCGGTTTTTCATTTCCTATAAGGTTTATATAAGTTac
atttgatttaattttggtTTGATATCAGCCTCTacaatcaaccaaaatta
aattttgaacaaGACGTCATTTTGTATACTGACTTTAAACATGTGTTTTT
TTTGTGTAGGACGTTTGTCCTGAAAACATATTATGGTTTAATGTGCCAAC
CGTTAAAAGACCTGACGTCACTCCAGTACTGAAGTTGATCGATTTCAATT
TATCTCGAAAAGTTCCGGAAGATTCGACGTTTTTACGAGCGGACGCGCTT
GGTAACCCATCTTATATGGCTCCCGAATGCCTGTCGGATGAACCGATCGC
CACCTTCTCTGGAGATATCTGGAGTGTTGGCGTTCTCATGTTCCTCTTAC
AGGTGAGTGTTGGTTCTTCACATTCTTCTCACGAACCTCTCTACAAAAGA
TAGTCGATTCTCATTCATTAGAATTTGCCATATATTACCGTCAATGTggg
atttcaaaatattgaattcTAATTCCTAACTCCTTTaagagaaaattatt
attttttataatcGTCTGCTATCTTTTCTCCTTCAGTCTGGTTACCCACC
CTTCTTCAACGATAATTACAATCACCTACTTAAAAACATCCAAGAAGCCA
ACTTCGTGTTTCCACAACATCTCTGGAGTCACGTGACCGATGACGGGAAA
GCTATCATTCAAGAAATTGTaagattttgagaatttttagtTATATATGG
GAAAGACACTTCTTTATCTTCAAACTTTGCACTCATTTTGGAAAGGTTAC
TTTGATGTTATAACCAGCGATAAAATCCgcttcagaaaaaaaactttcat
tttattttcttcaGCTTCAACAAGAGCCAGAGAATCGACCGACAGCCAGT
GAATTACTGACGCACCGCTGGTTCCGTACCCGAATCAGTACGGCAACCCC
GATCATAATCAAAACCACACCGATCAACCAAGCAGGCAGATACCTCTTTA
GAACTCAAAACAACTCATCTACTCTCGAAGAAAAGATATGGGCTGGTCAG
AAAAGATTAAAAGGATTCCTCCGACATCTAAACGAGAAAAAGACGAGGTA
ATTTATGTCGAATTATGCAATTAAAGAAGTATTAAATCTCATATCTAGTC
TGCATGTTTTTCTCAATCATCATTGGTTTAAAATGCTTGAtatcttaaaa
attgaaatttttttatgaaacatCATTCTTTTCTTTCAGGGCGAACCATC
GGAAATATTCCTTAGTTTTCAAAGAGCGACAGGCCTTCATTCCGGAATCT
CACATGATCACCATACCAACAAGCGCGCTCATCAATGAGGTCGATTTCTA
TCAACAAAAAGTCGCCGCAACCGCTTCCAAAACTCTCGAAAAATTGAACA
ATAGTATTGAAAGTCTAGAATTCAAAAGACAAAGTTTTCATTGGTAGTTT
GAGCCCCTTAACGTACAGAAGGATTGTATGTAATAAAAACTAAACCCCTG
TCGCAGAAAATTACGAATAACTCTGGAATAgctttttgagacaggggtgt
agacGTATTTAGCCTAGTaaagaaaaacttaattttttagttACATGCTT
CTCATAATAATCATTTAATTAGTGGTATGTCGCACCCAGTTTTTTAAACC
AAAACAGCAAAGTTAATTGTGTGTCTAAGATGATTATTTAAAGCTGGGTG
TGGCCATGCTATAGGTAATAATTTATAACGGAAAAATAGTAGAGTAGAAA
AAAATACTTATACATTCAAAACGgaaaaaactttgtaaatattttcttgt
atagagtatattatatatttttaatccCATGTGTATATTAGTTGTAACAC
CGAATTAGTTCTTGAAAATATAATAGTTTATTTTTTGGGCTCATGTttat
tttgagcttttttgatTCATGTGTGAAAGGCGAAAGACTCGTTTTTCTCG
CTCTCTTACGCGAGTTACGATTACCATAGCTAAAGATAACATCTTTTTTG
ATGAATATTCAAGTTTGTTACGAATTGATTATCTATTTTAACTCGCAATT
TCTAGTGTGTGACCCTCTCAATATTTTGCTTTCATCTTGCGAATAGAGTG
ACTTGTCTGGACCGCTTTGCAATTTTTTTAGATGTAAAAGGTTTCGAAAA
TAGAAAACTCTTTCCCGAGTGTCCGAGATATACCAAGATGTCCGTTATCC
GCGGAGAGCAAGAAAAGAATCGTGTGATAGACTGAACCATCTTTAAAATt
gattgatttcttttttataaataggttTATAATAAGTGTATTTTGAGTGG
ATTAATATGATGTTTAAAATATAATCTTTGTAAATAACAAAATtccaaac
ttttattttttgaccCTACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042878XLOC_042878Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068746-exon-scaffold_49-1491911889:118071..118140TCONS_00068746-exon-scaffold_49-1491911889:118071..118140Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:118071..118140TCONS_00068746-exon-scaffold_49-1510915933:118071..118140Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:118071..118140TCONS_00068746-exon-scaffold_49-1575043694:118071..118140Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:120145..120265TCONS_00068746-exon-scaffold_49-1491911889:120145..120265Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:120145..120265TCONS_00068746-exon-scaffold_49-1510915933:120145..120265Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:120145..120265TCONS_00068746-exon-scaffold_49-1575043694:120145..120265Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:126635..126762TCONS_00068746-exon-scaffold_49-1491911889:126635..126762Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:126635..126762TCONS_00068746-exon-scaffold_49-1510915933:126635..126762Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:126635..126762TCONS_00068746-exon-scaffold_49-1575043694:126635..126762Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:127331..127549TCONS_00068746-exon-scaffold_49-1491911889:127331..127549Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:127331..127549TCONS_00068746-exon-scaffold_49-1510915933:127331..127549Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:127331..127549TCONS_00068746-exon-scaffold_49-1575043694:127331..127549Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:127780..128022TCONS_00068746-exon-scaffold_49-1491911889:127780..128022Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:127780..128022TCONS_00068746-exon-scaffold_49-1510915933:127780..128022Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:127780..128022TCONS_00068746-exon-scaffold_49-1575043694:127780..128022Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:128207..128338TCONS_00068746-exon-scaffold_49-1491911889:128207..128338Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:128207..128338TCONS_00068746-exon-scaffold_49-1510915933:128207..128338Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:128207..128338TCONS_00068746-exon-scaffold_49-1575043694:128207..128338Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:128485..128717TCONS_00068746-exon-scaffold_49-1491911889:128485..128717Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:128485..128717TCONS_00068746-exon-scaffold_49-1510915933:128485..128717Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:128485..128717TCONS_00068746-exon-scaffold_49-1575043694:128485..128717Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1491911889:128860..129990TCONS_00068746-exon-scaffold_49-1491911889:128860..129990Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1510915933:128860..129990TCONS_00068746-exon-scaffold_49-1510915933:128860..129990Clytia hemisphaericaexon
TCONS_00068746-exon-scaffold_49-1575043694:128860..129990TCONS_00068746-exon-scaffold_49-1575043694:128860..129990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:118071..129990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.55842	0.000416773	22.0367	10.089	8.34034	7.89014	7.24357	19.634	0.00160805	1.05765	5.6147e-09	1.28054e-06	0.000171212	2.76167e-09	2.45067	0.50574	0.112687	3.18571	0.0250284	0.512546	10.3673	11.2215	0.494744	1.07379	0	0.000418742
Blast
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BLAST of TCONS_00068746 vs. Swiss-Prot (Human)
Match: DAPK3 (Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.264e-40
Identity = 86/271 (31.73%), Postives = 143/271 (52.77%), Query Frame = 2 
Query:  188 LGKGAWGNVYACRKSFGGSKKYAAKVVE----FGNDLGV-KWQTENEIEILKEVGNHGNIVGFHGVVRDTSSIAMILEFIPGGSFLEGLLNWPGFNENGMKIIAKQLLEALKFCHSNRIIHRDVCPENILWF--NVPTVKRPDVTPVLKLIDFNLSRKVPEDSTFLRADALGNPSYMAPECLSDEPIATFSGDIWSVGVLMFLLQSGYPPFFNDNYNHLLKNIQEANFVFPQHLWSHVTDDGKAIIQEILQQEPENRPTASELLTHRWFRT 979
            LG G +  V  CR+  G  K+YAAK ++      +  GV + + E E+ IL+E+  H NI+  H +  + + + +ILE + GG   + L       E+      KQ+L+ + + HS RI H D+ PENI+    NVP        P +KLIDF ++ K+   + F   +  G P ++APE ++ EP+     D+WS+GV+ ++L SG  PF  +     L NI   N+ F +  +S+ ++  K  I+ +L ++P+ R T ++ L H W + 
Sbjct:   19 LGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN-------PRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 277
The following BLAST results are available for this feature:
BLAST of TCONS_00068746 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPK34.264e-4031.73Death-associated protein kinase 3 OS=Homo sapiens ... [more]
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