TCONS_00068743 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068743
Unique NameTCONS_00068743
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2236

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068743 ID=TCONS_00068743|Name=TCONS_00068743|organism=Clytia hemisphaerica|type=transcript|length=2236bp
AGCTTTTCAACCTGTTTTGGAATGAAACGaCCGGACTGACCGTTTCAAAA
AAAGTCCGGAGAAAAGAAATGAGTTTCCCGAGGAAAGAACCTTCAAGCGT
TATCGTCACCAAACTCAAGAAACATGCAATGCACatcgaaaattttcttg
GAAAAGGAGCTTGGGGAAATGTATACGCATGTCGTAAAAGTTTTGGAGGG
TCGAAAAAGTACGCGGCCAAGGTGGTGGAATTTGGGAATGACCTCGGTGT
GAAATGGCAAACTGAAAACGAGATTGAGatctTGAAAGAAGTTGGTAACC
ATGGTAATATCGTTGGTTTCCATGGCGTTGTCAGGGACACGAGCAGCATT
GCCATGATCTTGGAGTTTATTCCCGGGGGATCATTTTTGGAAGGCTTACT
AAATTGGCCGGGCTTCAATGAGAATGGCATGAAAATAATTGCCAAACAAT
TATTGGAAGCTCTGAAATTTTGTCACTCAAATCGAATCATTCATAGGGAC
GTTTGTCCTGAAAACATATTATGGTTTAATGTGCCAACCGTTAAAAGACC
TGACGTCACTCCAGTACTGAAGTTGATCGATTTCAATTTATCTCGAAAAG
TTCCGGAAGATTCGACGTTTTTACGAGCGGACGCGCTTGGTAACCCATCT
TATATGGCTCCCGAATGCCTGTCGGATGAACCGATCGCCACCTTCTCTGG
AGATATCTGGAGTGTTGGCGTTCTCATGTTCCTCTTACAGTCTGGTTACC
CACCCTTCTTCAACGATAATTACAATCACCTACTTAAAAACATCCAAGAA
GCCAACTTCGTGTTTCCACAACATCTCTGGAGTCACGTGACCGATGACGG
GAAAGCTATCATTCAAGAAATTCTTCAACAAGAGCCAGAGAATCGACCGA
CAGCCAGTGAATTACTGACGCACCGCTGGTTCCGTACCCGAATCAGTACG
GCAACCCCGATCATAATCAAAACCACACCGATCAACCAAGCAGGCAGATA
CCTCTTTAGAACTCAAAACAACTCATCTACTCTCGAAGAAAAGATATGGG
CTGGTCAGAAAAGATTAAAAGGATTCCTCCGACATCTAAACGAGAAAAAG
ACGAGGGCGAACCATCGGAAATATTCCTTAGTTTTCAAAGAGCGACAGGC
CTTCATTCCGGAATCTCACATGATCACCATACCAACAAGCGCGCTCATCA
ATGAGGTCGATTTCTATCAACAAAAAGTCGCCGCAACCGCTTCCAAAACT
CTCGAAAAATTGAACAATAGTATTGAAAGTCTAGAATTCAAAAGACAAAG
TTTTCATTGGTAGTTTGAGCCCCTTAACGTACAGAAGGATTGTATGTAAT
AAAAACTAAACCCCTGTCGCAGAAAATTACGAATAACTCTGGAATAgctt
tttgagacaggggtgtagacGTATTTAGCCTAGTaaagaaaaacttaatt
ttttagttACATGCTTCTCATAATAATCATTTAATTAGTGGTATGTCGCA
CCCAGTTTTTTAAACCAAAACAGCAAAGTTAATTGTGTGTCTAAGATGAT
TATTTAAAGCTGGGTGTGGCCATGCTATAGGTAATAATTTATAACGGAAA
AATAGTAGAGTAGAAAAAAATACTTATACATTCAAAACGgaaaaaacttt
gtaaatattttcttgtatagagtatattatatatttttaatccCATGTGT
ATATTAGTTGTAACACCGAATTAGTTCTTGAAAATATAATAGTTTATTTT
TTGGGCTCATGTttattttgagcttttttgatTCATGTGTGAAAGGCGAA
AGACTCGTTTTTCTCGCTCTCTTACGCGAGTTACGATTACCATAGCTAAA
GATAACATCTTTTTTGATGAATATTCAAGTTTGTTACGAATTGATTATCT
ATTTTAACTCGCAATTTCTAGTGTGTGACCCTCTCAATATTTTGCTTTCA
TCTTGCGAATAGAGTGACTTGTCTGGACCGCTTTGCAATTTTTTTAGATG
TAAAAGGTTTCGAAAATAGAAAACTCTTTCCCGAGTGTCCGAGATATACC
AAGATGTCCGTTATCCGCGGAGAGCAAGAAAAGAATCGTGTGATAGACTG
AACCATCTTTAAAATtgattgatttcttttttataaataggttTATAATA
AGTGTATTTTGAGTGGATTAATATGATGTTTAAAATATAATCTTTGTAAA
TAACAAAATtccaaacttttattttttgaccCTACC
Run BLAST on NCBI

transcript from alignment at scaffold_49:114622..129990+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068743 ID=TCONS_00068743|Name=TCONS_00068743|organism=Clytia hemisphaerica|type=transcript|length=15369bp|location=Sequence derived from alignment at scaffold_49:114622..129990+ (Clytia hemisphaerica)
AGCTTTTCAACCTGTTTTGGAATGAAACGGTAATGTTTTAATGGATATTT
TGTGAGTGTACTAGTCCAATGAGCCAATGTGAAAGACTGAAGCTCTTTTG
ATGTGGTAATATAACTTCCAAGGAAAACttataaataaatgaaaactctC
CATCATAAATTTCGAGCTAAACATACGAACGTATTGATCGAAAGTTTTGC
GATGCTCTCTTAGAAAATGTTTATACCAGTAGAAAACAGTTTGTTTGTCA
AATAGGCGCTACACCTTTTTATGTTGAAGTAGTAAAGCGTTAAGTATCGA
CAATTTGAATATGGTATGATATTCcgtaacattttgaaaaaactttttcc
gttTTTTTCTTGAAGTCAAATTCCTTCTTGAAGTCAAATACCTTGGAAAT
CTAAACCATGTTACCGACTTTGCCCGTTTAATTCAAGGCTTTTCAAATAA
TTGGGTCTTGTGGTTTAAATGTTATGGTTATATAAGTTGAACATAAATAG
TTACAGATAGATGAACATTTTTAATATCCTTTTATTTTTGTACGAAAAAT
AAGGAAATCGCATCAAGCAATATCAGACGCCGGTAAActaatgtaaaatt
tatgtgatgcaAAACtaatatgaaattgttttggtAGAGTGCGGTTCCAG
ATGATTGCaaaatatttgagtaaataacattcaaaagaaagttttgagaG
CATATAGCAATGCTTAGGTTATCAAGTAACACACGGTAATTTGCAGATGA
CGTTTTCGAATAACGTTTAATACGTTTCAAGTGATATTTAGACAACTGGA
AGTGCTTTTTGCCGTTTCGTTTACTTCTCATTGTTTGTCTTAGGGTTGCC
AGGGTTGAATTTCGTTTGTGGTTTAGAAAGAATCTTTGTTTGATGGAAAT
TGTTTTTGTCTAATTGTTCAATGACAGGTTGTCTGTAAGACTTTTTAAGA
GAAACTTTCGTGCAAAAGTTTTCGTGTACAAACAGTGTGCGTAGAGTACG
GTCCATGACAGGAAACGGATGTGAAAGGAAAGAGGAGGTCTTCTTGTAAC
AATTTTAAAGTCAACGAGAACAAGAATTTCACTTTAGCTCATTGCCTATT
GTTGCTTAAGGAACATCAATTTGGACTAAGGTAACTAACTATATGCTGAA
AAAGGTTTTCGCAAGGAGTATTAGCccagggtccacttaaagcttttttt
atagactagatggcgcgattaagtggccctgtagtatatggtaatatgct
tttgcttaggcggactgtaaaatagtccgccagattttagttgtttctGG
AAGGCAAAAACAAtatgaagcaatatttttatttgagaataagggattgc
aaatctgttattgatgtttgtttctcatttttgattatatatttcgactc
caagtagttttattgttatttagatttttaacattttctctcgAAATGGC
GACCTCACCAAACGCCCTtgtctgatattccgatggtggattggcggtcg
cccacgctaaagctctaaagggagcgggccaatttcccatcggagaggaa
tgatagtcgggctttgatgtgccgcatccccagtcaggttcaacagccct
tgactttaaacctaaaaatatttcggttggacccgctaatccccgaaaac
gaggactgggttaccagacctcctgCTGCAAAATCCTTAACGTGGTCTCG
CGAAATCCCGtgatctaaaccttccagatgttgtaaattttcccgacctt
cagtgCTTTAGCGtatgggatgaaaatttcaccatctggttGCCAGATAG
AAAACGCCCAAGCCTTCTTCACTcggcgtcataaaaaattatcaaaaagc
aaagtgtAGCCAAAAGTAGACTAAAATAGTATGTGAATTTTTCCCGTTGG
CGAATTTACAGtagacgctctctaattcgattttcaagggcaTTTTCATC
TaataagggagcgtattgaatagtagagcgtcaTTTATGCGAGTGTCCTA
TTGACAGTGGCTTTCAATATCATCGAATAATGAAGCGTAGCGAACAGTAG
AACGTCAGTTCAACGAGCATAAAGTGCACTTTTTAACGGCTTCAGTATCA
TATGTGCTCACTTTTTAAGTGAGTAGTAAAATTTTCTAGAAAAAGTCAAT
GCTCATGCACTTTGAACATGTTTATAGCATTGTAGGTATTTCACCATGGA
AGTTCTTTGTTGTACCACGAGACCTGCCCGCCTACTCGAAATCTTAACCA
AATATACTCTTACActcaaatatttgaaaataatgaaatagaaGGCTTAT
TTCTCACAGTGTTTGGATTTCTGATACTCGTATATCGTATGTTAATCGAT
ATTCTATTTGAACTTAATTTCGCAAAGTTTATTAATCCTTGCTGATAGGT
AGTTATGCAAGCAAATAAATATGCCTCTACAGCGAGTTaataagttgatt
ttttttggctgaaGCTCATTTCCGATGGAAACCTGTTGAATATTCAAACA
TAATTTGAATTCATTTAAAATTAGTAGAGCCGGAGTTTTATCGGGTTTCT
ATTTTTTGCTTCGGAAATCTGCAACTGGGTGGAAGGTCTTTCATACTAGG
AAATAGCTGATTTTGCATGTTGGAggatttttcatttgtttttgacAAGC
CATCGTTCTGTTGTCCtgttacttttattttcaaaatgtgatTTCATGCT
GATCCGAATATTTTGAAGCTTTCCTGACTCCACGAGATGATAACATACCA
AgactttgtttttttctccacATGTTTATAAATCTTAAGGAAGtaagaaa
agaaattaattttgatagCACGGTTATGAAATTATTCAGTATCGTCATAT
TTAAAAGGTGTGTTTAAAACAGTTTTGAGGTCAACTTGCATAATAAGTGG
TTCAGACATTTAGTGGAGTATTCAAATACTATAGTAACTTCAGTGGGTGA
ATTTTTATGACCGTCAATGTCTGGTCTAATCTGCAATATTGGGATTATAA
GCGATCATGGtatgtttttcttctttcagttttcagtttttttctcaTTC
TGGGACATGCTGATGCTGACCGCTATTTCTTTCCGCTTGAAACCTTATGA
GATGATTCCATATGGGGTGGTTTATATCTACATAAAATATCGAGATCATC
GACATTTGATCATAAGAATCTCAAATAGTCAAGAATTGTAAGCGTTGAAG
TTAAGCGTAATGTGTCCAGGGTTAAAATGATGTCAGTGTCGGGATGTCGA
GATAAATATTCGTTTTTTCATAGTTACAATAAACCTTTATTTTTGCCGCT
TTAATTTACCATTTTACTTTTCCATATTCAAATAATACTCTCAATTATTT
TTTGTTGCAAAATTTGCTTTTCCCAAAAGCCTTAGTGTGATTATCTCTAA
ATAATTTACTCCGATCTTTTTTTTGCgaaataatttttcctttttgagAG
GAGATTGTTCgttgaaagaaattttgctgTTATGTCTCTCGTCTGGTAAA
CTTTTGCGGTGTGTAGAGTGTAAGCATCTATACCAGTTGAATATATTTTA
ACAAATATGGCAAATCAAGAACTGTGTTTaagttttcgttttttaattCC
ATTCGTAATCTTATCTCATAGGCGAGTTAACTTATCGACGGAATCCATTA
CAAATCAAAACCGCTTATCCTACATAAAGTGATCAAATGTTTTAGTTTCT
ACGCCCATGAAAAGCTCTTTTTGGTGAATAGATTTATATAGTCATTTTTg
ctatttcatatttttgatctcatttctttgaaaagttcgtgaatttttga
aatcctttaaaatttgatatttatattAACACTGCAATTTGTGCATCTGA
GCTTTATAAAGGTCATTTCTTTCTGCAAACGAAATTTTCTACCTTGTACG
TTACCTTTGATCGCATCGTCGAGTGGTATAAAATCGATAGTTGCCTTGTT
TTATGAAATGTATAAGTCACTACTCCCCGAGTCGGGATtgggtaattttc
gcgcctgctgccttccttagatgtggtagccGTTTCTCAGACCCTCTCTC
TGGAAAGAATTCGGTTTAAGCAGGTAATCGGttgacattgaaaaaaattc
atcttAGAAGGCTTCGTCGCAAAAAGCAATTTCTTGAGAAGGACATACAA
ATTAATTATGACTGATTGGATTACATTAAATATGCCCGCTATTTCACTTA
AACGTGCTTATCCTCTTTGTGAACCGAAAATGCCGACTTTCATCCCTAGT
CCTTTTTTAGAACATATCAAAAGCCGGGTAAAAATTGGATTTAAGTCTAT
TTCTAGCTGGGGTTTCAGCCCCAAAGATTGAGTGCTACCCTTATATATAT
AAGGTCATTTTAGGAGGGAAGACACTCTTCCCCGTTTCTGTTTTCCTCTA
ACTAGGCCTATATTGGATTACTTCTACTTCGCATATAAGATAAATAAAAC
GGAGAAATTTAAGATGGTATGAAATATCAAATTCGAACCAGGGTGCTATT
CTCTTTCGGATTCATCACttctcaaaaaaaagtcaattaGGATTTAATAA
GTGGATAGTACGAACTATGGGATaaacaaaaaaggttaagaaatttCTCG
GTGCTATGTTAAAATGCCTGGATGTCAAAGAAAAGGTTTTTGAGGATATT
GAGTCAAGTGGACGCGGACATAAATTTATTGCTTTATTGCAGTGCGGTCT
GTGTTCGTACGGATGAGCGGAACTTTGAGGTATGTGTCACTATATCTGAA
TCACCCACTAATCAATGTTGGCAGCCCGTGTTTTAAAGTTTATATTGTGT
TGCAACAACGATCTGGGAAGAGTTGGACTGAGTATTAACGAACAGGAAAT
TGTGAAATTGAAGAATCGCCTCAATTTGCACACGTCACGTGTGATGGTTT
GACGTGTTCTgcgtttgatgacgtcagcagattCGTTTTTATTTAATAGC
GTATGTTTGGCATAACTAGCCCTAGATTTTAAACTCTCGTTCAGTTTGTT
GTTTTGGATTTCTTCTTCTGGTTTGCATAACTTCAAACCGAAAGAAGAAC
TTATTTTTTCGTTGGGTTTCCCGACTTCTAAGCGGTGTCATTGAGACTAA
TGCGTCGATCTTATAATGAAAACAAGAAATTCAATCGAAATTGAATATGC
ATGTCGATTCCCGTAGTGCGGGCGCGCCATCAATATTTATTTTCCTCCAA
AAACATTTGCTTCTGAAATATGCATGAAGAAATTGAATCCGTTTGAATTG
GGTTTTTGAATAATCGGGGAATGATTGCTCATTCGATACTGAATATCTAT
TGCTCTCTTATCAAATGGCGTTAGAGAAAATCTTGGTGTGAATTTAAGTT
GTATTAGAATGTCACCTCAAAACTGGCTAAGAAAATCACTTCGTGCTAGT
TAGAGAAAACTTTGGTGTGAATTTAAGTTGTATTTGAGTGTCACCTCAAA
ACTGGCTAAGAAAATTACTTCGTgctaatttgaatattttttgatgttac
ttaatctttcttttttattatagaCCGGACTGACCGTTTCAAAAAAAGTC
CGGAGAAAAGAAATGAGTTTCCCGAGGAAAGAACCTTCAAGCGTTATCGT
CACCAAACTCAAGAAACATGCAATGCACatcgaaaattttcttggtAAGA
TTATTTTCTCCTTGACCCTGTCTCGAAGTAATGATTTTGTACAGTTTCTG
TAGTACTATGTATTCGAGTATAGGAGTGATTCGAAAGTTGCGTAAAACAT
CAGAATTTATGAGcaatagattttaaaattttattgcaGTGTTTtgcatt
tttgcaattttaatcTCAAAGAATAGTTTTGAGGATAGGTCACTCATAAT
GACCGTTACTTGCaactattttacaaatctaaaATCCAAACTGGATTAAT
TTTCTTTAAGCCGTGAGATTAGATCGGTTCCCGACTGAATAATGCATAGT
TAACGGCCGATCAGTCTATTCTTTAATTCACAGAAAGTTTTTAGTTAATC
GCCTGAAGGCTCGGCTGACGTCAATAGGATATATATTTAGAAGAGTTTAG
TTTTCAAAACCCATGCATGCCGGTTCACGCAGTGTTTGGAATCCCTGTTA
AGTTCGTTACATTTGAACTTGCTTTAATTAACCCCTCACAGTTACTGATG
GACTTTGAAATTTATACCCACAGATATTATATAACTGCTCTTAGATTTCC
CGTGGAAGTGTATCCAGTTTTGAAGTCGATTAGTCCGGCATGTTGTTTAC
CAATTTATCTTAGGTTTTCGAACCTTTGAATTTCAAAGCATTCGAATCGT
GCTGTTGACgaacaaaattgaaaacaagatgacATAGACTAGTCAGCTCT
AAATTTGGACACGCTTCCTATATACGGATAGCCCTATCCAGTCAAATAGT
TAAGATCAGTGTTTATACTTTATTGGTACTAAAAGCTATGGTGTTTCATG
ATATTGTGTAACTTAAAACAAATGCGTAACATTGAGTTTTgttaagtaaa
aagtaaaaacttagcattataaaattataaaagcTAGGTCATTTGGATTT
TACATTGTTTAACTTTAAGTACATTTGTGTACATTCGCGATTTGCGATAT
TGAATTTTTAGTTCAACCAAATTGTTAAACTAAGGGACTGAAGCATCCAT
ACTAAATCCTTGTTGGTATGGCGCAAATCTACTGGAATAAAAAATCATCT
TTCCACAAATTGCTTTAAAATTTGCTACGCTACTATCGCCTACTTTTTAC
CAAAAAGTCAATTTCCGATTTAAAGATCGTGGTATATGTTAATCTTAAAG
CACTTAGAGACGTGACTTAGCCAATTCTAAATAATTGATTTCAAAGACTC
AAAGGAGAAGGAAAAATTCTGGGATGCTACGGATAAGAGTGAAGGAAAAA
GGGTAATAATCCTGAGGCATTTTGATTTCTTAATCAACAAACAGACGATA
AGCTCTAATTGTAATGGCCTGCTCATTAAGAAGCATGATTATTTTTGTAG
ATTAGCTTCCCGCTGAGATGATTTATCTTAAAGTCTCAAACCTTCGAATG
CGTTCAGCCTATTTCATTTTTGCAAACATCGGGGGCTCATAAACATAGAT
TAAGGTTTTCAAAAGAAAGGGGAGGAGATGTAAGTCTGGGAATTACGTGT
TGCAAAATAAGCGTTGGAcgtttttaaggcttgaaaGCTTAGTAAGAAGC
GTTGAACGTCTCTAGGGGTTCAAAGCTTAATCAAGAAGAGTTGGCCGTCT
TTCGCACCAGTTCTAATGATGGATTAAATATTTTGGCTGTCAGCCGTTGG
CAGATGACCAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTCTGTAGTACTATGTATTCGAGTGTAGGAGTGATTCGAAA
GTTGCGTAAAACATCAGAATTTATGAGcaatagattttaaaattttattg
caGTGTTTtgcatttttgcaattttaatcTCAAAGAATAGTTTTGAGGAT
AGGTCACTCATAATGACCGTTACTTGCaactattttacaaatctaaaATC
CAAACTGGATTAATTTTCTTTAAGCCGTGAGATTAGATCGGTTCCCGACT
GAATAATGCATAGTTAACGGCCGATCAGTCTATTCTTTAATTCACAGAAA
GTTTTTAGTTAATCGCCTGAAGGCTCGGCTGACGTCAATAGGATATATAT
TTAGAAGAGTTTAGTTTTCAAAACCCATGCATGCCGGTTCACGCAGTGTT
TGGAATCCCTGTTAAGTTCGTTACATTTGAACTTGCTTTAATTAACCCCT
CACAGTTACTGATGGACTTTGAAATTTATACCCACAGATATTATATAACT
GCTCTTAGATTTCCCGTGGAAGTGTATCCAGTTTTGAAGTCGATTAGTCC
GGCATGTTGTTTACCAATTTATCTTAGGTTTTCGAACCTTTGAATTTCAA
AGCATTCGAATCGTGCTGTTGACgaacaaaattgaaaacaagatgacATA
GACTAGTCAGCTCTAAATTTGGACACGCTTCCTATATACGGATAGCCCTA
TCCAGTCAAATAGTTAAGATCAGTGTTTATACTTTATTGGTACTAAAAGC
TATGGTGTTTCATGATATTGTGTAACTTAAAACAAATGCGTAACATTGAG
TTTTgttaagtaaaaagtaaaaacttagcattataaaattataaaagcTA
GGTCATTTGGATTTTACATTGTTTAACTTTAAGTACATTTGTGTACATTC
GCGATTTGCGATATTGAATTTTTAGTTCAACCAAATTGTTAAACTAAGGG
ACTGAAGCATCCATACTAAATCCTTGTTGGTATGGCGCAAATCTACTGGA
ATAAAAAATCATCTTTCCACAAATTGCTTTAAAATTTGCTACGCTACTAT
CGCCTACTTTTTACCAAAAAGTCAATTTCCGATTTAAAGATCGTGGTATA
TGTTAATCTTAAAGCACTTAGAGACGTGACTTAGCCAATTCTAAATAATT
GATTTCAAAGACTCAAAGGAGAAGGAAAAATTCTGGGATGCTACGGATAA
GAGTGAAGGAAAAAGGGTAATAATCCTGAGGCATTTTGATTTCTTAATCA
ACAAACAGACGATAAGCTCTAATTGTAATGGCCTGCTCATTAAGAAGCAT
GATTATTTTTGTAGATTAGCTTCCCGCTGAGATGATTTATCTTAAAGTCT
CAAACCTTCGAATGCATTCAGCCTATTTCATTTTTGCAAACATCGGGGGC
TCATAAACATAGATTAAGGTTTTCAAAAGAAAGGGGAGGAGATGAAAGTC
TGGGAATTACGTGTTGCAAAATAAGCGTTGGAcgtttttaaggcttgaaa
GTTCAATTAAGAAGCGTTGGACGTCTCTAGGGGTTCAAAGCTTAATCAAG
AAGAGTTGGCCGTCTTTCGCACCAGTTCTAATGATGGATTAAATCTTTTG
GCTGTCAGCCATTGGCAGATGACCAATAACGTCAGATATTCCTTGGTAAA
CTGTATACGATGACCTCAACAAGGAACCCTAAAATAGACATCAGCACGTA
TTATCCTTTGGAAGTAAAGCTTTAGAATGTCGATGCAgagatttcattga
aaatggaACACTCTCCTGTTGACAACGGCATCAGCAAGTTTATCTGCTCT
GTACTAGAAAATGATTGTTTAGGGAACCTCAATACCAATGACCTCAACAA
GGAACCCTAAAATAGACAGGACAACCCTATTATGTTAAATTTAGCTGTGC
ATCAGACATCCGTAGcatcaattttcttttcacCTTAAAgaagaaatgtt
ttcttttttcgttGCCTTCCCCATTTTTCCAGAGCAGATTTCAGCAACAT
CCAATCTTCTTGCTGCAGAATAGTGACGATAGGTGTACAAAAATTGCTAG
AGGAAAATTCTTTACCCTTGAGGAAAGTTAGAAAATCATCAATTGAAACC
AGAGGGATTACTATCTAGAAATTGAGGCCGacattgattttgttttattt
accATACAGAAAATTATTTGTAGTCAGGGGAAGATCATTGTTTTCACAAA
GTGCTTACGTCACATGTCGACAACCATCTCAGGAAAGTTAGATAAGAGAT
TTGGGAGATGATACCATGCCTAATAAGCCATTAGAATTATGGGATAAGCA
TACTATGGTATGCGGTGTCGAGGTTCCCTAAGCAATCATTTTCTAGTACA
GAGTAGATAAACTTGCCGATGCCGTTGTCAACAGGAGAGTGCtccatttt
caatgaaatctcTGCAtcgacattttaaagctttactTCCAAAGGATAAT
ATGTGGTGATGTCTCCTTTGCCTATCACAAAACTGCGAAACCTTATCATA
ACGGCTGGTTAATACGTCATCAATTAAATGATAAACTTTGATTAAATTAG
GGTTCGATCTTATCCTTGATTCGTCTATACTACTCGTGCTGTGTACCCTC
TTCTTACTTaaagtaaaaattcaaaacttcgaataaattttaaaactttc
taaGACTTATTACAAAACTTTACCACAGTCACAAAAGGATTTGAATTATG
CTTGcaacatcaataaattacaaagatttttctttgaaagaaaatgtcgg
CTGATTATTCATCAAGAAAGTAAACCGTTAGATCCTTATCTAAAGGGATG
CCATCACACAAGATTTGAGGGCTTGATAAGAGAAGAAACAACGATGACTT
GGAAATTCAAATGCAAAGAACTTAACGTGAAGTTTTATGGGGAAACTAAT
CACTTCACGGTAACTCGAGATAAGATTTGACAGGGTTTTAATAAAGTAGA
ACTCCCAGACAACCCAATACTGAGTTCTAGTTTCAAATAGAAGTAACTGT
GCTAACTATGAATATTTCGCTGTTCGGGAAATTGAAATTCACAGCTCCTG
CTGGTTCTTTACGTCATAAGTCGATTTTGCTTTCCAATAAATTCCCTTTG
CTTTCACCCGAGTGTAATGACCTGTATCACATTTTCGGGAGAGTGCAATT
GAGCTATTTCAGAAAAATGTTATACCCCCTTTTTTGAGGAGGTCGTTTTG
GGAAAGGTGACCccttagattttttttcaatttttcggtaCCCCCTTGGC
CAAtcctggatttttacactcaaAAAACTAGACCCATCCGTTAGATATTT
AATTTTCCAGACCACCTTGGGCGTCACATCTCCTCAACTTAGGGGTTACA
GACTATTTATCGGCTAACTTTTATCCACTAAAGATTCTCAGCTCTACAGC
TCTAAATTGCCGCCTTTTCTAAGgttgtttttaaaagaatcgAACACTNA
TTTATCGGCTAACTTTTATCCACTAAAGATTCTCAGCTCTACAGCTCTAA
ATTGCCGCCTTTTTTAAGGTTCTTTTTAAAAGAATCGAACACGAAACACG
AAAGTTACTTATCACTATATTGTAGAGTTAAGTACCGTAAGTTCATTGAG
TCCATTGTCTGAATACCAGCCTAAAAGCGTTGTGAAAGCACCATTGgaag
aaaaaagtaaatttagcTAGCGCTAGTTTCACAGCTTGTAAAAAGTACCC
ACTGTTTAGGTTGGAACCTTCGCtgactttctttcttttttttctttgac
tATTCCCTTGATCTCCTATGGCCGCTAAACTTCACGGTAACGCGATTCTG
TTATTCTGTTAAAAACCTCCATTCATTTCATTCTCAAACGTGTAGAAATG
AAATAGAAAATCTCTGCATGCTGATTGGGGGCCAATAAACAATCGCCATC
AAACTCAGCGgatcaataaaaagaaatcgGGAGGTTGTAAGATGTCAGCT
TAAAAAGACATCAAAAACTtctgaaacttttttcataagaacgtGTTCTA
CTATtcgctaaaatataaaaacaagcTTGGCACAAAATCTGGTAATCGTA
CCAAGATTATTATTTTCAATCCCAACTCTAAATCCCCATATATTTTCTTT
GAACACGTTTTCGGATTAATTCAGCGTCATTTTACTGATGAAAGAATccc
tttttaggtttttatatATTCTTACAATAAATAAGAAATCGTCATCTAGA
TAAAGATCTGTATTGTTATGCGAATGAGAATTAATTTCAGGAAAATAGGT
TGATATAACAGAGAGTAGTTCAGAAGGTTAGCCAGTTATTTAATCGAAGT
TCAGCCTCTCACATCTCAAAGGAacaaagttttatataatttgactgGTA
CTATCTGCGTGAAGAAGATGAGAGAAAatctaaaaggattttcaaatttc
gatCCCATCTTAGGAAAAGGAGCTTGGGGAAATGTATACGCATGTCGTAA
AAGTTTTGGAGGGTCGAAAAAGTACGCGGCCAAGGTGGTGGAATTTGGGA
ATGACCTCGGTGTGAAATGGCAAACTGAAAACGAGATTGAGGTGAGTACA
AAATTAAATAcattgaattttattatttttcctgtttttttctAGATTCA
AAACTCACTATTTGAGCTCGTAGGTTTTGTAAGTGGTTTTAAATCggatt
ccccccccccccaaacccTTGTCCAATTtcgataaaaattatttttttct
tttttttttttaaattaaaaacccCCTATTTGAGCTCGTAGGTTTTGTAA
GTGGTTTTAAATCggattccccccccccccacacacATTGTACAAATTCA
gtcaaaatgatatttttcaattgtaatcaacattttctgtttttgcctac
ggtatgctctctctctctctgaaAGCGGATTAAAATATTGATGATAGTTT
TTTCATGCCTGACCTGAGGTAACTTTAGgttgtttttgattttcttttca
actaAAGGTAAAGAtgtatttttaagttttataaACCGCAAAAGATATTT
TCCATCCCTAAGCCTCGAAACTTATATAAAATGCCAAAAATTTCGAAACG
TTTCTTTTCTTACCTATGTTTTCCCTTTGATACAAATTAttcgtattttt
ctttttcagatctTGAAAGAAGTTGGTAACCATGGTAATATCGTTGGTTT
CCATGGCGTTGTCAGGGACACGAGCAGCATTGCCATGATCTTGGAGTTTA
TTCCCGGGGGATCATTTTTGGAAGGCTTACTAAATTGGCCGGGCTTCAAT
GAGAATGGCATGAAAATAATTGCCAAACAATTATTGGAAGCTCTGAAATT
TTGTCACTCAAATCGAATCATTCATAGGGTATGTACACttctattgtttt
aactttgagTTTGTCCATGCCCGTATCTACCACGCATTGCGTATTATTTT
CGACATGTACTTGCGGTTTTTCATTTCCTATAAGGTTTATATAAGTTaca
tttgatttaattttggtTTGATATCAGCCTCTacaatcaaccaaaattaa
attttgaacaaGACGTCATTTTGTATACTGACTTTAAACATGTGTTTTTT
TTGTGTAGGACGTTTGTCCTGAAAACATATTATGGTTTAATGTGCCAACC
GTTAAAAGACCTGACGTCACTCCAGTACTGAAGTTGATCGATTTCAATTT
ATCTCGAAAAGTTCCGGAAGATTCGACGTTTTTACGAGCGGACGCGCTTG
GTAACCCATCTTATATGGCTCCCGAATGCCTGTCGGATGAACCGATCGCC
ACCTTCTCTGGAGATATCTGGAGTGTTGGCGTTCTCATGTTCCTCTTACA
GGTGAGTGTTGGTTCTTCACATTCTTCTCACGAACCTCTCTACAAAAGAT
AGTCGATTCTCATTCATTAGAATTTGCCATATATTACCGTCAATGTggga
tttcaaaatattgaattcTAATTCCTAACTCCTTTaagagaaaattatta
ttttttataatcGTCTGCTATCTTTTCTCCTTCAGTCTGGTTACCCACCC
TTCTTCAACGATAATTACAATCACCTACTTAAAAACATCCAAGAAGCCAA
CTTCGTGTTTCCACAACATCTCTGGAGTCACGTGACCGATGACGGGAAAG
CTATCATTCAAGAAATTGTaagattttgagaatttttagtTATATATGGG
AAAGACACTTCTTTATCTTCAAACTTTGCACTCATTTTGGAAAGGTTACT
TTGATGTTATAACCAGCGATAAAATCCgcttcagaaaaaaaactttcatt
ttattttcttcaGCTTCAACAAGAGCCAGAGAATCGACCGACAGCCAGTG
AATTACTGACGCACCGCTGGTTCCGTACCCGAATCAGTACGGCAACCCCG
ATCATAATCAAAACCACACCGATCAACCAAGCAGGCAGATACCTCTTTAG
AACTCAAAACAACTCATCTACTCTCGAAGAAAAGATATGGGCTGGTCAGA
AAAGATTAAAAGGATTCCTCCGACATCTAAACGAGAAAAAGACGAGGTAA
TTTATGTCGAATTATGCAATTAAAGAAGTATTAAATCTCATATCTAGTCT
GCATGTTTTTCTCAATCATCATTGGTTTAAAATGCTTGAtatcttaaaaa
ttgaaatttttttatgaaacatCATTCTTTTCTTTCAGGGCGAACCATCG
GAAATATTCCTTAGTTTTCAAAGAGCGACAGGCCTTCATTCCGGAATCTC
ACATGATCACCATACCAACAAGCGCGCTCATCAATGAGGTCGATTTCTAT
CAACAAAAAGTCGCCGCAACCGCTTCCAAAACTCTCGAAAAATTGAACAA
TAGTATTGAAAGTCTAGAATTCAAAAGACAAAGTTTTCATTGGTAGTTTG
AGCCCCTTAACGTACAGAAGGATTGTATGTAATAAAAACTAAACCCCTGT
CGCAGAAAATTACGAATAACTCTGGAATAgctttttgagacaggggtgta
gacGTATTTAGCCTAGTaaagaaaaacttaattttttagttACATGCTTC
TCATAATAATCATTTAATTAGTGGTATGTCGCACCCAGTTTTTTAAACCA
AAACAGCAAAGTTAATTGTGTGTCTAAGATGATTATTTAAAGCTGGGTGT
GGCCATGCTATAGGTAATAATTTATAACGGAAAAATAGTAGAGTAGAAAA
AAATACTTATACATTCAAAACGgaaaaaactttgtaaatattttcttgta
tagagtatattatatatttttaatccCATGTGTATATTAGTTGTAACACC
GAATTAGTTCTTGAAAATATAATAGTTTATTTTTTGGGCTCATGTttatt
ttgagcttttttgatTCATGTGTGAAAGGCGAAAGACTCGTTTTTCTCGC
TCTCTTACGCGAGTTACGATTACCATAGCTAAAGATAACATCTTTTTTGA
TGAATATTCAAGTTTGTTACGAATTGATTATCTATTTTAACTCGCAATTT
CTAGTGTGTGACCCTCTCAATATTTTGCTTTCATCTTGCGAATAGAGTGA
CTTGTCTGGACCGCTTTGCAATTTTTTTAGATGTAAAAGGTTTCGAAAAT
AGAAAACTCTTTCCCGAGTGTCCGAGATATACCAAGATGTCCGTTATCCG
CGGAGAGCAAGAAAAGAATCGTGTGATAGACTGAACCATCTTTAAAATtg
attgatttcttttttataaataggttTATAATAAGTGTATTTTGAGTGGA
TTAATATGATGTTTAAAATATAATCTTTGTAAATAACAAAATtccaaact
tttattttttgaccCTACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042878XLOC_042878Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068743-exon-scaffold_49-1491911889:114622..114650TCONS_00068743-exon-scaffold_49-1491911889:114622..114650Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:114622..114650TCONS_00068743-exon-scaffold_49-1510915933:114622..114650Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:114622..114650TCONS_00068743-exon-scaffold_49-1575043694:114622..114650Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:120145..120265TCONS_00068743-exon-scaffold_49-1491911889:120145..120265Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:120145..120265TCONS_00068743-exon-scaffold_49-1510915933:120145..120265Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:120145..120265TCONS_00068743-exon-scaffold_49-1575043694:120145..120265Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:126635..126762TCONS_00068743-exon-scaffold_49-1491911889:126635..126762Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:126635..126762TCONS_00068743-exon-scaffold_49-1510915933:126635..126762Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:126635..126762TCONS_00068743-exon-scaffold_49-1575043694:126635..126762Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:127331..127549TCONS_00068743-exon-scaffold_49-1491911889:127331..127549Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:127331..127549TCONS_00068743-exon-scaffold_49-1510915933:127331..127549Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:127331..127549TCONS_00068743-exon-scaffold_49-1575043694:127331..127549Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:127780..128022TCONS_00068743-exon-scaffold_49-1491911889:127780..128022Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:127780..128022TCONS_00068743-exon-scaffold_49-1510915933:127780..128022Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:127780..128022TCONS_00068743-exon-scaffold_49-1575043694:127780..128022Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:128207..128338TCONS_00068743-exon-scaffold_49-1491911889:128207..128338Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:128207..128338TCONS_00068743-exon-scaffold_49-1510915933:128207..128338Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:128207..128338TCONS_00068743-exon-scaffold_49-1575043694:128207..128338Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:128485..128717TCONS_00068743-exon-scaffold_49-1491911889:128485..128717Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:128485..128717TCONS_00068743-exon-scaffold_49-1510915933:128485..128717Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:128485..128717TCONS_00068743-exon-scaffold_49-1575043694:128485..128717Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1491911889:128860..129990TCONS_00068743-exon-scaffold_49-1491911889:128860..129990Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1510915933:128860..129990TCONS_00068743-exon-scaffold_49-1510915933:128860..129990Clytia hemisphaericaexon
TCONS_00068743-exon-scaffold_49-1575043694:128860..129990TCONS_00068743-exon-scaffold_49-1575043694:128860..129990Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:114622..129990 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.259333	0.0217404	7.30574e-10	0.047236	3.21472e-05	0.0177796	2.23152	1.57224e-06	0.00196194	0.000598443	1.83787	0.522645	1.22154	3.10079	4.45681	5.74917e-05	4.01101	9.60332	11.1258	0.120261	3.29731	0.711217	4.19179	1.11903	0.0931458	0.62461	4.11705e-06
Blast
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BLAST of TCONS_00068743 vs. Swiss-Prot (Human)
Match: DAPK3 (Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.456e-40
Identity = 86/271 (31.73%), Postives = 143/271 (52.77%), Query Frame = 3 
Query:  147 LGKGAWGNVYACRKSFGGSKKYAAKVVE----FGNDLGV-KWQTENEIEILKEVGNHGNIVGFHGVVRDTSSIAMILEFIPGGSFLEGLLNWPGFNENGMKIIAKQLLEALKFCHSNRIIHRDVCPENILWF--NVPTVKRPDVTPVLKLIDFNLSRKVPEDSTFLRADALGNPSYMAPECLSDEPIATFSGDIWSVGVLMFLLQSGYPPFFNDNYNHLLKNIQEANFVFPQHLWSHVTDDGKAIIQEILQQEPENRPTASELLTHRWFRT 938
            LG G +  V  CR+  G  K+YAAK ++      +  GV + + E E+ IL+E+  H NI+  H +  + + + +ILE + GG   + L       E+      KQ+L+ + + HS RI H D+ PENI+    NVP        P +KLIDF ++ K+   + F   +  G P ++APE ++ EP+     D+WS+GV+ ++L SG  PF  +     L NI   N+ F +  +S+ ++  K  I+ +L ++P+ R T ++ L H W + 
Sbjct:   19 LGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPN-------PRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 277
The following BLAST results are available for this feature:
BLAST of TCONS_00068743 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPK33.456e-4031.73Death-associated protein kinase 3 OS=Homo sapiens ... [more]
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