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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068213 ID=TCONS_00068213|Name=TCONS_00068213|organism=Clytia hemisphaerica|type=transcript|length=1938bp
AGTTCACAAAGGAAGAACTTTTTAGTATTTAAAGAATAGTAGAGAATGTC
TCGCGAAACAGCCTGGTCAAACTGGAATGAGTGGAAGCAttgcaaaaagt
tgtttttctcAAACGATAACAGTGAGATTTCGAAAGCAATAGATTTTGTG
AAAATGTGGAAAGCACGTATTAGAACAGGCTCTATGCCTGTATCTATTGA
TCTTACTTCAATTTTATTTGGTGCTAAAATACAACTTGATGGATCAAATC
TTGAAAATGAGCAGCAAGCTCTATTATGTGGTGCAATGGCTTTAGTTCGA
TTTGTGAATGGTATTACTGATCAATTCCAAACTGGCTTTTATGCTCAACC
TGTTCAAAATATTGCTGATAAAATTGATATTCCAGAATGGATGGTTGAAT
TGCGCCATGAAATTACACATGGTCAGATACCCAGTGTGGATCTTGTACAC
AAAGGTTTGATGTTTTCTTTAAATTGGCTTTTTGATAATTACTGGCAAGA
AACAGCTTACAAAATTGAAGATCAAAACAAGACATTTCAAAAATCTGTCA
TTGAGTTACTCAACCAGTACACAGATTTAGTTTTTGAATCTGTGGCAAAT
ATAAAAGTGGAAGCTTCTTCAGAAactaagaaagaaaagaaaaaagctaa
TAAAAATGAACGAGACCGTGAAATTGTGATTCAAAaccttttgaaaattg
ttaacCATGGTAATTTGTCTGTCTTTGTTGAATATTTATCAAAATGTAAT
AGCTTTGTATTGGAAAACCATAAACAGCTTGAGTTGAGTCTTCCAACATC
AGTAAATATGGAATTGGATGATACTGGATTTCAAGCTATTGATACTTTAG
CAGAACTCTGGAAACcattttttcttccatttcagGAGAGATTCAAACAT
ATAAATGAACTCCTGTTACAAAACCTTAGTGATAATGCTAAGAATTCTGG
GAATCTAATATCTACATTGTTGGCAGTTCACATATTATCATCAAACATTA
CCACTACGAACACTATAATATTTGttgtttctcttttattgaaaaatcct
TCAATTCTCTCGTTTCAAATTCTGTCCAAAATCATATTAAGTGTGGAAGT
CATAAACACAGAGATGAAAGAACTGTTGGAAGTATTTTTAAGTACTTTTG
AATCTActgtttattttttgaataaaaaactccCCGGTGTGATGGTTGAT
AAAACACATGTTTTCACTGATGTTATTAGTAAATTAACTGGAGTTGAAGA
GCCAAAAAAATCCAATCCAAAGAGTGGTAACAAAAAGAAATGGACATGGT
TATCAGATCAAGAATTCCAGGAGTTGCCACCAATAGGCGAATTCAAATCT
GGCAACACCTATCAAAATCTTAATACTCAATCCAGGATTTGTAAAGTCCA
TTACATTGATGATGTAAGCGTTCAACACTTGAAAGCCGAAACAACCAAAA
GCTATTACAATCCTGAAATTGCTGATGTTATTGAAAGTTTATTTGATAAG
AATGGTCATGTCTTTATTTATGATGATGATAGTGATAGTGAATCTTGTCC
AACCGAAGGTTATACTGAAGACGCAGAGATGTCCTGGTTTGCTGATGAGG
AACGTCCTGAACCAAACAAAGTCGATTTTGAGATTGAAGGAGATTCTGCT
GATCAGAAAAATGGCATTCTGAAATCACACAATCTCTATGCTAACACTGT
TGATGTATCAAAGCtcatattattttaaaattcaacaaaagaaatttcat
tttttatataatcacatattattttttcttcactttctgattttttatta
ttctttTTTACAATACTTataattgaaattcaaaaaaaaattattttgtt
actttgtctttccttttttgtttgaagtccatGACACTGTCACTGTACTG
ATGATTGTAAATCTATCGTTTCTACTTTGGTCTGTTTT Run BLAST on NCBI protein sequence of TCONS_00068213-protein >TCONS_00068213-protein ID=TCONS_00068213-protein|Name=TCONS_00068213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=560bp
MSRETAWSNWNEWKHCKKLFFSNDNSEISKAIDFVKMWKARIRTGSMPVS
IDLTSILFGAKIQLDGSNLENEQQALLCGAMALVRFVNGITDQFQTGFYA
QPVQNIADKIDIPEWMVELRHEITHGQIPSVDLVHKGLMFSLNWLFDNYW
QETAYKIEDQNKTFQKSVIELLNQYTDLVFESVANIKVEASSETKKEKKK
ANKNERDREIVIQNLLKIVNHGNLSVFVEYLSKCNSFVLENHKQLELSLP
TSVNMELDDTGFQAIDTLAELWKPFFLPFQERFKHINELLLQNLSDNAKN
SGNLISTLLAVHILSSNITTTNTIIFVVSLLLKNPSILSFQILSKIILSV
EVINTEMKELLEVFLSTFESTVYFLNKKLPGVMVDKTHVFTDVISKLTGV
EEPKKSNPKSGNKKKWTWLSDQEFQELPPIGEFKSGNTYQNLNTQSRICK
VHYIDDVSVQHLKAETTKSYYNPEIADVIESLFDKNGHVFIYDDDSDSES
CPTEGYTEDAEMSWFADEERPEPNKVDFEIEGDSADQKNGILKSHNLYAN
TVDVSKLILF Run BLAST on NCBI transcript from alignment at scaffold_480:79240..88629+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068213 ID=TCONS_00068213|Name=TCONS_00068213|organism=Clytia hemisphaerica|type=transcript|length=9390bp|location=Sequence derived from alignment at scaffold_480:79240..88629+ (Clytia hemisphaerica)
AGTTCACAAAGGAAGAACTTTTTAGGTAAGCGTGCTTTTTCAGCTAGAAT
CACCATCTTTTTCTGCAGACGTCATTAAGTCGAACGACGCTTGTATTACT
CGAGAAATAATTAGCGATTCATTGCATTTTTCAATGTTCAGTACGGTGCT
CCGTTCAGTTCAGTACTGTCTCCAAACAACATCTCACTTCCCTCGCTCTC
AACAATCAGACAGTCTGACAGTTACGTTACAGTCTTGCAGCAGTAGGTAT
TGTATATTCATTTCCAAGCATATTTCTGTATTAATTTGCATTATTTTTAC
ATACATGCTCCTGCCTAGTCAGGAGATCCATGATGTGAGTCCTTCTCtag
gtggggggcgtacgagggttGCCAACACCGAAAAACCGacagatttttct
taaatcaccgtaataccgacaaaattttcctaaaacacCGACACCGACGT
CTTTTAGAGCAAGCTTAagatttttattctttgtacgAATGCTCAATATC
ACGAGCGTAGTAGTGCACTAGTTCAGTTTTTCTTGGAGAAAACTATCGCC
GATTCAAGGGTTTCAAATCTTTAAAGCTCAGCTTTTCAACGACTAGTGGA
TAAACAAATCCAGAATTTTTAGGGAACACTTTGAAGGGTTGGTATTTTTA
CTTTACTGCTTACTTTAGTTgactttgaagaaaaacatttaaNCTTTTCA
ACGACTAGTGGATAAACAAATCCAGAATTTTTAGGGAACACTTTGAAGGG
TTTAAAGTGGTATTTTTACTTTACTGCTTACTTTAGTTgactttgaagaa
aaacatttaaaaagtttttaaaagatctttGCAAAAAACGAAGGAACAAA
AGAGATATCTGAATGTATAAAGTAATGGaggaggaggcgcaaccatggct
TGCGCCGacagaaaaattttcaactttcaactttcaatctGTCTAAAAAC
GCCCCATATTATACCGatttagcaccaaaaataaagccCCTCAAATAAAA
TACATGAGCTGTTGATNCCTCCCGATCCCAAGAAATGGGTTTTCTAATCA
TTCACGGGTCGAAACCCCTGAAGCCTTAGCATGTTTCTCATTACATTGTC
TTTTAAACGCTTTAACCAGAAAGGGTCGCAAACCGATTGAAACAAAGCCA
CGCGGGTAAAAGAAGGCACaagcatggtttgcgccgacagaaaaatattt
caggaaatctcatttggctaaaaacgctctctttttcacaaaactaGTCA
TTTTACTATGCCATCCAGATAAATAGTTCGTTTGATTTAGGCTGAAACTA
AGCTGGTATTGAAAGCCTGCAAAGAGAGCTCTGCAAGGGGAGGACCACAG
GAAGTATTTTATATTGAAAGGCAAATGAGATATGATTCGAGGGCNACGCA
GGCAAAAATCTTTTGTGTGAGAAAGGTCAAACCCACATTGACGCTTTTTC
GCGAGGTCTGAATTGCtgttttaaaaaatgctgacattTTATACATATAg
cacttttttaaaccaatcatcaaaacaaaagaacgcgCGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCGCGCAACGTCATTTCATTGTtcaattaaacaata
gaatgtcctctttctaaaattacattttaacgACCCGAAAGTTTgcaatg
ttttgacttttaagaGATTAATAAGAATTGAAATAAAGTGTCTGTGTTTT
TAATGCAGTAGAGTGAATAATGTTATGCTTTTGCAGAATAAGCAAAGAGC
CTCATgtatgtacagggtgtccctaataaaagtatcgagtttgaacatgc
gattgagtagaaagctttaagtgtgtattcacaaaattgtattttaagct
ctccctcttttttctttgtcagttatacgttgtaactaccttttgtaatg
agcctatgtgatggagaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGacccaaaaaatcaattt
taccgTCACCGCAAGGCATGtccaacaccgaaataccgacactttttact
taaaacaccaaaacaccaacgcaaaaaagggtcaataccgacacaccgac
aaacccgtacgcccccccctcTAGTAGGTACCATACTACTGATGAATCAA
TGGCAGAAAGCTTCAAagcttatttttattttcattctcaGCTCTCAGGC
AGTCAGGGTTTTATTCATTATAAAACAGatagtcccctgcccagttggcg
accagTCTAGTTGGCGACAGTGCGATCGAATGTTTTTGAACCCAAAAAAA
GTCATTCGAAAACAcacctctggagaatttcttttataTACATACAGTAC
TTAATAATTAATCCAGGCGGTGTCAATCGAACTGTTCGATTATTGAACTA
ATCAAACTTAATCGCACCCATTATTGAACTAATCAAACTTAATCGCACCC
TATCGAACGATAGCTGTTCGATTACCGAACCCAATCGAACACCTATTGAA
CCGGGAAAACTTTTATTACTTTCTTTAAAGAAAGTGTCATCTCTATTATT
TTTAATGTATTAATCTTTTCTTATTTTTTCCGGTGGTCCTTGCTTGGAAA
ACATTGGGGAACGCATTTGTTTTGCCACCAATAATGGCGCCAAATGTTTT
GATTCGGAGTGGCAATCAACGAAAAGATTACATCATGAATATCAAGAATA
ATGAGTGAAGCATACGGTGCCTGTGTTTTGATTAAACAAACTCGTAATTT
TCTGAAAGGTAAAAAAAAGTAGAATCAATCCGACACACAATCATCGAACA
TCAATCGAACTTTCATCGAACTCATCAAATATcaatcgaacttcatcgaa
caaagaacactcatcgaactaaatcgaacttatcaagaaattttcgtaaa
gttcgatagctgttcgatcgggttcggtaatcgaactgctatcgttcgat
tttgttcgataaCAAAAATCGGTTCGATAACAAAAATTGGTTCGATAGGG
TTCAGTTTACACCGCCTGGATTAAAGGGATAAAAttttgcggggacttaa
tttcgtggTTGGCAcccggggggcactcgatttcgaaacgacagTATGTg
tcgcgcaaaatctgcttttaaaaatcttacccttagtgcagttcaatatt
aaaaatcgtacccttacagtgcagttcaatatggctgaaaaggaaccctt
tcagtgcattttctcatgatttacccaaccctttagtgcactatattttt
cagctgtaaatctgcgtgaaaaaagaagctttggaaattttctgtttcaa
agaaaaactgcgaaaattattcttgtcagctgtaattatcagacaataga
aacttttcaaacaaacaagaagtaagaaaaacttttctttttatcaatta
ttttgaatttgttttaaaattcgacccttgcagtacaatctcacagaaac
acacccttacagtgcattttggaaTGCTGAaaaagcgcggcacatgacgt
aggccagatcatatgagtgacCCCCCCCCCGAGGGGTGGCACTATTGgat
ggcaatattttcacgattttgtatctttatactgtcaaatcatgcatatt
ggttgttgatatacacattatttgcgctttttttatgcaagtaaccattc
aaaaattatttaaatttgacatattttgagttttaattagaaatatttcg
cggatttttgcggatgacacccaaatccgcgaaatccgttaaatttaatc
cccacgaaagtttatcccattaaagtagtagTTATCTTCCTCCTTGGCCT
ATTTTTGGCGTAATGTGTAAAAAGAAATTCTGGAAACAACAACTACAAGA
GGTCATCTTCAGAGAAGACAATGACCTCTGAAGATGAGTGAAGTGAGTGA
GCATTGAATATACAGTATAGTGTTtaacaacatcaaaaacatTAAGCTTC
TGGTTATTCTTTTTATCATTAAATTAGATGCCCAAGGAAACATTTTTCta
gaaaagttctaaaaaaggGTCCATTCTGCTCCTCTGCCAACCATGAACCT
CCCCTTTGTAGCAATGGCAAAATGAATCAATTTAGGGGTTGCCCCACGCT
CCAGAGAACTCTCATGTTCCTCCACTCTGTTTCAGCTATTTGCATAGCAA
AAACAGCGAGAGGAGAGagtacaaagtaaacaaaaataaaccgTAACAGT
AAATAGATCTTGCATCTTGAGGTTTATAGCACCTTCAGAACAGATTTTTC
GGTTTTATTCCCAGGCAAAACCTCGTTTTTCTCCGTTTTTGTCGATTTTG
GCCTaaatataattaaaattttGTAGTTAATATATATAgtagaggtatat
aattgttataTTCTAATCatacttttttccaaggaatattttaagcCCAA
TTTGAGGGTGGTAACACCAACAGAACAGGTTGTAGGTTTTTTATCCAGGC
AAAAGTGCCGAAATTTGCCCATTTTGGGCATTAAAAAGGCCGGAGAAcgg
tcaaatttcaaaaaaaatctcagATTTGTGTACTTGGATTCCATTtatcc
caggggggggggtcgatagtaaaatctcagacatatatgagtagtaattt
ttacataccaccacccagactcttggaagaggtattttactacccttttt
cggacaatttgtcatggagaccacctattttttggttgattttcggactt
attttacaaaaaaaagctaaaaaatgattatttctgtgacacatttttca
cttagtgcaaaatctaatgttttgcccttagaattgaaatattttttatt
ttgacaaaaaatttagagaattttttgtttgcagcaaacaactttccaac
aacaaattttgttaaattataaaaattttcagattttttagaaaagtcat
gtcatccaaaaaattaaaagaattacaaaaatagctaaaatttgctaatt
ttaccagttttaaactacccaggtagtaaaaatttttcaaaatttaacac
atagataccacccattttagtatttaactaccctgggtagtaaaaagttt
tttcgattttttgtcacaccaccaccgtaaacgtcattatgtctgagatt
ttactaccgaccccccccccctgtttatcCAAAAACTTTAAATTAGCCCA
TTTTGGGCATTAAAAGGCCGGAGAacggtcaaatttaaaaaagaaatctc
aGATTTGTGTACTTGGATTCCATTTATTCAAACAACTGGTTATACATTCC
TTGTTACAAAGAGTTTTGAGTACTTTATCCAATGATCCAACCGTATATGG
ACTGAGCTGCTTTTAAAGCTTGTCTGCTTAGAATATAATCAGATCGAGAT
GTAAAAATCTAATTGTAAAAATATCTTGAGCTAGTAAACTTCTTCCAAAT
GCAATGATTGTCCGCATTGGACATTCAAAAGTTGATATTGGCTTTAACAA
GCCGTATATAATTGTTCTGAATTGTTTGAAAGGTTAAGTTACAATGAAAA
TCATAAGGATGTATAGACCTTATACCGAATAGGTAGAATCTAAAAATCCT
ATATTTATTTGAATAGTTGTTTATTGAACCAATCAAAAGGCGCTATTGTG
TTATCCATCCCTTAAATACTACCTAAATACTCGAATAGGTTTGAAGAATT
TaatgctttttttaaataaatcagACCTTAAGCTGTTGATTTAATTACAA
TGTTATTGGTGTTAATTATTAAGGAATTCTACAAAATATGACTATCTGTT
CAAACAAGCGTTCTTTAAGAAGTtaattggaaaaaagttttgagaaatGA
AATCATCTTGTGAACTTCCAAGTAGTAAAACGTCCCTCCTTTCCAGGGAT
ACAACCCTTTAAATGCTTTCATATTGATCCATTTGTTTGGAAGCTACTTT
TTAGAAATAGGTTATATTTCTTAAACATTGGTATCTTTCAAAAGATTCGC
TATAAACCTGTTCTAATATGACTTGTTTGAATTAAAATTATTCGAATAAT
TCCATATGTCAGCTATCGGTATAGCCTAGTGATTTAAATTTTAACTTAAC
CCTTAAATGATTAAGGCTTCCTAAAAACAATTATCAACTTTTCAATCTTC
AATATGGGTAGGGAATCATTGTATTTGAAAGGAGCTCACTAGCTCAAGAT
AGTTTAAACAAGATTCAAAGCAGGTTGATTTTTGCTTAATGACTAGTTGA
GCAGATAAACTTAAAGCAGCAGTACACGGGGTTACCTCATTGGATAAAGA
TAAAGTACTCAAAACACCCTATGAGGATGAATGTATAACATTAGCCAGTG
TCAAAAAGCCACAGACGAACTAAAAGCTCAGAAATATCCTTGAAATATCC
TCAATAAAAGCTATGTACATTGGGGAGAGGCATTAGCCTAACAGAGCCCC
GATTTCGGACAACCAGTCCATCAACAATCATTGTGTGACTGTCACACATA
TATAATTATGATACTTGTTATCTTTAGTATTTAAAGAATAGTAGAGAATG
TCTCGCGAAACAGCCTGGTCAAACTGGAATGAGTGGAAGCAttgcaaaaa
gttgtttttctcAAACGATAACAGTGAGATTTCGAAAGCAATAGATTTTG
TGAAAATGTGGAAAGCACGTATTAGAACAGGCTCTATGCCTGTATCTATT
GATCTTACTTCAATTTTATTTGGTGCTAAAATACAACTTGATGGATCAAA
TCTTGAAAATGAGCAGCAAGCTCTATTATGTGGTGCAATGGCTTTAGTTC
GATTTGTGAATGGTATTACTGATCAATTCCAAACTGGCTTTTATGCTCAA
CCTGTTCAAAATATTGCTGATAAAATTGATATTCCAGAATGGATGGTTGA
ATTGCGCCATGAAATTACACATGGTCAGATACCCAGTGTGGATCTTGTAC
ACAAAGGTTTGATGTTTTCTTTAAATTGGCTTTTTGATAATTACTGGCAA
GAAACAGCTTACAAAATTGAAGATCAAAACAAGACATTTCAAAAATCTGT
CATTGAGTTACTCAACCAGTACACAGATTTAGTTTTTGAATCTGTGGCAA
ATATAAAAGTGGAAGCTTCTTCAGAAactaagaaagaaaagaaaaaagct
aaTAAAAATGAACGAGACCGTGAAATTGTGATTCAAAaccttttgaaaat
tgttaacCATGGTAATTTGTCTGTCTTTGTTGAATATTTATCAAAATGTA
ATAGCTTTGTATTGGAAAACCATAAACAGCTTGAGTTGAGTCTTCCAACA
TCAGTAAATATGGAATTGGATGATACTGGATTTCAAGCTATTGATACTTT
AGCAGAACTCTGGAAACcattttttcttccatttcagGAGAGATTCAAAC
ATATAAATGAACTCCTGTTACAAAACCTTAGTGATAATGCTAAGAATTCT
GGGAATCTAATATCTACATTGTTGGCAGTTCACATATTATCATCAAACAT
TACCACTACGAACACTATAATATTTGttgtttctcttttattgaaaaatc
ctTCAATTCTCTCGTTTCAAATTCTGTCCAAAATCATATTAAGTGTGGAA
GTCATAAACACAGAGATGAAAGAACTGTTGGAAGTATTTTTAAGTACTTT
TGAATCTActgtttattttttgaataaaaaactccCCGGTGTGATGGTTG
ATAAAACACATGTTTTCACTGATGTTATTAGTAAATTAACTGGAGTTGAA
GAGCCAAAAAAATCCAATCCAAAGAGTGGTAACAAAAAGAAATGGACATG
GTTATCAGATCAAGAATTCCAGGAGTTGCCACCAATAGGCGAATTCAAAT
CTGGCAACACCTATCAAAATCTTAATACTCAATCCAGGATTTGTAAAGTC
CATTACATTGATGATGTAAGCGTTCAACACTTGAAAGCCGAAACAACCAA
AAGCTATTACAATCCTGAAATTGCTGATGTTATTGAAAGTTTATTTGATA
AGAATGGTCATGTCTTTATTTATGATGATGATAGTGATAGTGAATCTTGT
CCAACCGAAGGTTATACTGAAGACGCAGAGATGTCCTGGTTTGCTGATGA
GGAACGTCCTGAACCAAACAAAGTCGATTTTGAGATTGAAGGAGATTCTG
CTGATCAGAAAAATGGCATTCTGAAATCACACAATCTCTATGCTAACACT
GTTGATGTATCAAAGCtcatattattttaaaattcaacaaaagaaatttc
attttttatataatcacatattattttttcttcactttctgattttttat
tattctttTTTACAATACTTataattgaaattcaaaaaaaaattattttg
ttactttgtctttccttttttgtttgaagtccatGACACTGTCACTGTAC
TGATGATTGTAAATCTATCGTTTCTACTTTGGTCTGTTTT Coding sequence (CDS) from alignment at scaffold_480:79240..88629+ >TCONS_00068213 ID=TCONS_00068213|Name=TCONS_00068213|organism=Clytia hemisphaerica|type=CDS|length=1683bp|location=Sequence derived from alignment at scaffold_480:79240..88629+ (Clytia hemisphaerica)
ATGTCTCGCGAAACAGCCTGGTCAAACTGGAATGAGTGGAAGCAttgcaa
aaagttgtttttctcAAACGATAACAGTGAGATTTCGAAAGCAATAGATT
TTGTGAAAATGTGGAAAGCACGTATTAGAACAGGCTCTATGCCTGTATCT
ATTGATCTTACTTCAATTTTATTTGGTGCTAAAATACAACTTGATGGATC
AAATCTTGAAAATGAGCAGCAAGCTCTATTATGTGGTGCAATGGCTTTAG
TTCGATTTGTGAATGGTATTACTGATCAATTCCAAACTGGCTTTTATGCT
CAACCTGTTCAAAATATTGCTGATAAAATTGATATTCCAGAATGGATGGT
TGAATTGCGCCATGAAATTACACATGGTCAGATACCCAGTGTGGATCTTG
TACACAAAGGTTTGATGTTTTCTTTAAATTGGCTTTTTGATAATTACTGG
CAAGAAACAGCTTACAAAATTGAAGATCAAAACAAGACATTTCAAAAATC
TGTCATTGAGTTACTCAACCAGTACACAGATTTAGTTTTTGAATCTGTGG
CAAATATAAAAGTGGAAGCTTCTTCAGAAactaagaaagaaaagaaaaaa
gctaaTAAAAATGAACGAGACCGTGAAATTGTGATTCAAAaccttttgaa
aattgttaacCATGGTAATTTGTCTGTCTTTGTTGAATATTTATCAAAAT
GTAATAGCTTTGTATTGGAAAACCATAAACAGCTTGAGTTGAGTCTTCCA
ACATCAGTAAATATGGAATTGGATGATACTGGATTTCAAGCTATTGATAC
TTTAGCAGAACTCTGGAAACcattttttcttccatttcagGAGAGATTCA
AACATATAAATGAACTCCTGTTACAAAACCTTAGTGATAATGCTAAGAAT
TCTGGGAATCTAATATCTACATTGTTGGCAGTTCACATATTATCATCAAA
CATTACCACTACGAACACTATAATATTTGttgtttctcttttattgaaaa
atcctTCAATTCTCTCGTTTCAAATTCTGTCCAAAATCATATTAAGTGTG
GAAGTCATAAACACAGAGATGAAAGAACTGTTGGAAGTATTTTTAAGTAC
TTTTGAATCTActgtttattttttgaataaaaaactccCCGGTGTGATGG
TTGATAAAACACATGTTTTCACTGATGTTATTAGTAAATTAACTGGAGTT
GAAGAGCCAAAAAAATCCAATCCAAAGAGTGGTAACAAAAAGAAATGGAC
ATGGTTATCAGATCAAGAATTCCAGGAGTTGCCACCAATAGGCGAATTCA
AATCTGGCAACACCTATCAAAATCTTAATACTCAATCCAGGATTTGTAAA
GTCCATTACATTGATGATGTAAGCGTTCAACACTTGAAAGCCGAAACAAC
CAAAAGCTATTACAATCCTGAAATTGCTGATGTTATTGAAAGTTTATTTG
ATAAGAATGGTCATGTCTTTATTTATGATGATGATAGTGATAGTGAATCT
TGTCCAACCGAAGGTTATACTGAAGACGCAGAGATGTCCTGGTTTGCTGA
TGAGGAACGTCCTGAACCAAACAAAGTCGATTTTGAGATTGAAGGAGATT
CTGCTGATCAGAAAAATGGCATTCTGAAATCACACAATCTCTATGCTAAC
ACTGTTGATGTATCAAAGCtcatattattttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068213-exon-scaffold_480-1491911889:79240..79264 | TCONS_00068213-exon-scaffold_480-1491911889:79240..79264 | Clytia hemisphaerica | exon |
| TCONS_00068213-exon-scaffold_480-1510915933:79240..79264 | TCONS_00068213-exon-scaffold_480-1510915933:79240..79264 | Clytia hemisphaerica | exon |
| TCONS_00068213-exon-scaffold_480-1575043694:79240..79264 | TCONS_00068213-exon-scaffold_480-1575043694:79240..79264 | Clytia hemisphaerica | exon |
| TCONS_00068213-exon-scaffold_480-1491911889:86717..88629 | TCONS_00068213-exon-scaffold_480-1491911889:86717..88629 | Clytia hemisphaerica | exon |
| TCONS_00068213-exon-scaffold_480-1510915933:86717..88629 | TCONS_00068213-exon-scaffold_480-1510915933:86717..88629 | Clytia hemisphaerica | exon |
| TCONS_00068213-exon-scaffold_480-1575043694:86717..88629 | TCONS_00068213-exon-scaffold_480-1575043694:86717..88629 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_480 | supercontig | scaffold_480:79240..88629 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007174 | Las1 |
Blast
BLAST of TCONS_00068213 vs. Swiss-Prot (Human)
Match: LAS1L (Ribosomal biogenesis protein LAS1L OS=Homo sapiens GN=LAS1L PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.652e-18 Identity = 48/145 (33.10%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 61 AWSNWNEWKHCKKLFFSNDNSEISKAIDFVKMWKARIRTGSMPVSIDLTSILFGAKIQLDGSNLENEQQALLCGAMALVRFVNGITDQFQTGFYAQPVQNIADKIDIPEWMVELRHEITHGQIPSVDLVHKGLMFSLNWLFDNYW 495
AW + EW F +D+ A++ + +W++R +P+++ T+ L K+ L ++ LL G MALVRFVN I+++ +T F P++ +A +++IP+W+V+LRHE+TH ++P ++ +G F L+WL YW
Sbjct: 44 AWLSRAEWDQVTVYLFCDDHKLQRYALNRITVWRSR-SGNELPLAVASTADLIRCKLLDVTGGLGTDELRLLYG-MALVRFVNLISER-KTKFAKVPLKCLAQEVNIPDWIVDLRHELTHKKMPHINDCRRGCYFVLDWLQKTYW 185
The following BLAST results are available for this feature:
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