|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067676 ID=TCONS_00067676|Name=TCONS_00067676|organism=Clytia hemisphaerica|type=transcript|length=962bp CACTGCCTTTTGGTGCTTTTGGGGTCGAATTCTTGCTAACAGACTTTTCA ATAGGACAAACAAGTTTAATCACCCAAAGTTGATCAGCAAGATTGAGCAA TTAAAAAGAAGAGTGTAAGAAAGAAAAACTCCATTTGTGATCGTTGCACA GCAAAAGAAGGTTACGtgagaaaaagtttcttaattttcaaatttgtttt ctaCTTTTGAtcagattcttgttgtaaaatcgaaatttaacaTTGTGCGA TTAAGAAGCTTATGTCTGTCCGCTAAAACACATAAGAGTAGGCTGTATTC CATGTCTTGCTTCTAGTCTGTTTCTTAGCCAGCAAAccgtcatcaaattt tatgatcCAGAGCCAAAAGCTATCAACCATTCGTTTGCAAAACATCCCTC ATGAAAAAGAACGCGTAATTAAAGATTCAAACCATTCAAAGAGAGAGGTG AACcatttgactttaaacatatAGGAGGACCTCCCAAAGCATTTTGTTGA ATTAACAAGGCACAGATTATCAATACCTGAAAATAAACCAATCACTATTT CTATCGCTGCCAGTATGTTGACGAAATCAGTCCTAGAATAGTTAGAAAAG CTGAACAAAATCCTCAAAGTCGATCATTTGTGGCCTTTTGTGGTGTTTAC TTTCCATCCAGTGTATCATTAGGATTAAAAAAAGGAGTTCAAAGTCAATG CAAAGCTGCTATGAAGAATGTAACTTGCAGAGCTGACAGTTTACCACTCA TTTGGTTGTCTTACAATGAGATTTCAAGTTCCGTAGAATGCAATGAGAGG GGTCAAGACCGTTCAAAAGCAAATTATCAGGTTTTACAATTATTTATTTC AACTTCTTGGGAAATACCTTTcaacaacttttttctttctttttttttga catcGAAAATTGGATCTTGAAGAATTTTGTTTACGAGAGAATATAGAAAG GGGTTTGGGGNN Run BLAST on NCBI transcript from alignment at scaffold_472:420320..421281+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067676 ID=TCONS_00067676|Name=TCONS_00067676|organism=Clytia hemisphaerica|type=transcript|length=962bp|location=Sequence derived from alignment at scaffold_472:420320..421281+ (Clytia hemisphaerica) CACTGCCTTTTGGTGCTTTTGGGGTCGAATTCTTGCTAACAGACTTTTCA
ATAGGACAAACAAGTTTAATCACCCAAAGTTGATCAGCAAGATTGAGCAA
TTAAAAAGAAGAGTGTAAGAAAGAAAAACTCCATTTGTGATCGTTGCACA
GCAAAAGAAGGTTACGtgagaaaaagtttcttaattttcaaatttgtttt
ctaCTTTTGAtcagattcttgttgtaaaatcgaaatttaacaTTGTGCGA
TTAAGAAGCTTATGTCTGTCCGCTAAAACACATAAGAGTAGGCTGTATTC
CATGTCTTGCTTCTAGTCTGTTTCTTAGCCAGCAAAccgtcatcaaattt
tatgatcCAGAGCCAAAAGCTATCAACCATTCGTTTGCAAAACATCCCTC
ATGAAAAAGAACGCGTAATTAAAGATTCAAACCATTCAAAGAGAGAGGTG
AACcatttgactttaaacatatAGGAGGACCTCCCAAAGCATTTTGTTGA
ATTAACAAGGCACAGATTATCAATACCTGAAAATAAACCAATCACTATTT
CTATCGCTGCCAGTATGTTGACGAAATCAGTCCTAGAATAGTTAGAAAAG
CTGAACAAAATCCTCAAAGTCGATCATTTGTGGCCTTTTGTGGTGTTTAC
TTTCCATCCAGTGTATCATTAGGATTAAAAAAAGGAGTTCAAAGTCAATG
CAAAGCTGCTATGAAGAATGTAACTTGCAGAGCTGACAGTTTACCACTCA
TTTGGTTGTCTTACAATGAGATTTCAAGTTCCGTAGAATGCAATGAGAGG
GGTCAAGACCGTTCAAAAGCAAATTATCAGGTTTTACAATTATTTATTTC
AACTTCTTGGGAAATACCTTTcaacaacttttttctttctttttttttga
catcGAAAATTGGATCTTGAAGAATTTTGTTTACGAGAGAATATAGAAAG
GGGTTTGGGGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00067676-exon-scaffold_472-1491911889:420320..421281 | TCONS_00067676-exon-scaffold_472-1491911889:420320..421281 | Clytia hemisphaerica | exon |
TCONS_00067676-exon-scaffold_472-1510915933:420320..421281 | TCONS_00067676-exon-scaffold_472-1510915933:420320..421281 | Clytia hemisphaerica | exon |
TCONS_00067676-exon-scaffold_472-1575043694:420320..421281 | TCONS_00067676-exon-scaffold_472-1575043694:420320..421281 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_472 | supercontig | scaffold_472:420320..421281 + |
Blast
The following BLAST results are available for this feature:
|