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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067676 ID=TCONS_00067676|Name=TCONS_00067676|organism=Clytia hemisphaerica|type=transcript|length=962bp
CACTGCCTTTTGGTGCTTTTGGGGTCGAATTCTTGCTAACAGACTTTTCA
ATAGGACAAACAAGTTTAATCACCCAAAGTTGATCAGCAAGATTGAGCAA
TTAAAAAGAAGAGTGTAAGAAAGAAAAACTCCATTTGTGATCGTTGCACA
GCAAAAGAAGGTTACGtgagaaaaagtttcttaattttcaaatttgtttt
ctaCTTTTGAtcagattcttgttgtaaaatcgaaatttaacaTTGTGCGA
TTAAGAAGCTTATGTCTGTCCGCTAAAACACATAAGAGTAGGCTGTATTC
CATGTCTTGCTTCTAGTCTGTTTCTTAGCCAGCAAAccgtcatcaaattt
tatgatcCAGAGCCAAAAGCTATCAACCATTCGTTTGCAAAACATCCCTC
ATGAAAAAGAACGCGTAATTAAAGATTCAAACCATTCAAAGAGAGAGGTG
AACcatttgactttaaacatatAGGAGGACCTCCCAAAGCATTTTGTTGA
ATTAACAAGGCACAGATTATCAATACCTGAAAATAAACCAATCACTATTT
CTATCGCTGCCAGTATGTTGACGAAATCAGTCCTAGAATAGTTAGAAAAG
CTGAACAAAATCCTCAAAGTCGATCATTTGTGGCCTTTTGTGGTGTTTAC
TTTCCATCCAGTGTATCATTAGGATTAAAAAAAGGAGTTCAAAGTCAATG
CAAAGCTGCTATGAAGAATGTAACTTGCAGAGCTGACAGTTTACCACTCA
TTTGGTTGTCTTACAATGAGATTTCAAGTTCCGTAGAATGCAATGAGAGG
GGTCAAGACCGTTCAAAAGCAAATTATCAGGTTTTACAATTATTTATTTC
AACTTCTTGGGAAATACCTTTcaacaacttttttctttctttttttttga
catcGAAAATTGGATCTTGAAGAATTTTGTTTACGAGAGAATATAGAAAG
GGGTTTGGGGNN Run BLAST on NCBI transcript from alignment at scaffold_472:420320..421281+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067676 ID=TCONS_00067676|Name=TCONS_00067676|organism=Clytia hemisphaerica|type=transcript|length=962bp|location=Sequence derived from alignment at scaffold_472:420320..421281+ (Clytia hemisphaerica)
CACTGCCTTTTGGTGCTTTTGGGGTCGAATTCTTGCTAACAGACTTTTCA
ATAGGACAAACAAGTTTAATCACCCAAAGTTGATCAGCAAGATTGAGCAA
TTAAAAAGAAGAGTGTAAGAAAGAAAAACTCCATTTGTGATCGTTGCACA
GCAAAAGAAGGTTACGtgagaaaaagtttcttaattttcaaatttgtttt
ctaCTTTTGAtcagattcttgttgtaaaatcgaaatttaacaTTGTGCGA
TTAAGAAGCTTATGTCTGTCCGCTAAAACACATAAGAGTAGGCTGTATTC
CATGTCTTGCTTCTAGTCTGTTTCTTAGCCAGCAAAccgtcatcaaattt
tatgatcCAGAGCCAAAAGCTATCAACCATTCGTTTGCAAAACATCCCTC
ATGAAAAAGAACGCGTAATTAAAGATTCAAACCATTCAAAGAGAGAGGTG
AACcatttgactttaaacatatAGGAGGACCTCCCAAAGCATTTTGTTGA
ATTAACAAGGCACAGATTATCAATACCTGAAAATAAACCAATCACTATTT
CTATCGCTGCCAGTATGTTGACGAAATCAGTCCTAGAATAGTTAGAAAAG
CTGAACAAAATCCTCAAAGTCGATCATTTGTGGCCTTTTGTGGTGTTTAC
TTTCCATCCAGTGTATCATTAGGATTAAAAAAAGGAGTTCAAAGTCAATG
CAAAGCTGCTATGAAGAATGTAACTTGCAGAGCTGACAGTTTACCACTCA
TTTGGTTGTCTTACAATGAGATTTCAAGTTCCGTAGAATGCAATGAGAGG
GGTCAAGACCGTTCAAAAGCAAATTATCAGGTTTTACAATTATTTATTTC
AACTTCTTGGGAAATACCTTTcaacaacttttttctttctttttttttga
catcGAAAATTGGATCTTGAAGAATTTTGTTTACGAGAGAATATAGAAAG
GGGTTTGGGGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067676-exon-scaffold_472-1491911889:420320..421281 | TCONS_00067676-exon-scaffold_472-1491911889:420320..421281 | Clytia hemisphaerica | exon |
| TCONS_00067676-exon-scaffold_472-1510915933:420320..421281 | TCONS_00067676-exon-scaffold_472-1510915933:420320..421281 | Clytia hemisphaerica | exon |
| TCONS_00067676-exon-scaffold_472-1575043694:420320..421281 | TCONS_00067676-exon-scaffold_472-1575043694:420320..421281 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:420320..421281 + |
Blast
The following BLAST results are available for this feature:
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