TCONS_00067630 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00067630
Unique Name	TCONS_00067630
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3998

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_472:14675..21649+
coding sequence from alignment at scaffold_472:14675..21649+

transcript sequence

>TCONS_00067630 ID=TCONS_00067630|Name=TCONS_00067630|organism=Clytia hemisphaerica|type=transcript|length=3998bp
tttcagcaacaataagaaataatagaattacaaacaaaatcaTAACAATA
TGAATAATGAGTGACCGTGGAGTGATTGAAAGTAACGGTACCGACCAGAA
ACCACCCATTGCAACATCAGATGAACCATCCAGTCAAAAGAGGAAAACCA
AACAAATTAGTCTGAGTGATTATTTCACGAAACGAAGAAAAATGTCAACT
ACCAACAACGAGAAAACTGAAACCGAAGATTCAAGTGATGCATCCAAGCG
CGAGATATTGGCATCCGCCGCTGAACGTCGTCTCAACAACCCTATCAAAC
GTAGTGTATCTCTTCTCGACGAATCAGAGGCCGAGAAACGTCTTTCGGTT
GTTACTAAAGAGACGTCATCCGTTGTTCCTTCAAACCATGAAAATGACGA
TAACGTTGTAAAAACAAACAGCTCCGAAAATGAAAACTCGTCCTCGAAAG
AGGAGGAAGAAGAAACAAAGCAAACGAAAGTTGAAATCCCGCCCCATTTT
AACCGATCGCCATATTGTTATGACGCCCTACCATCGTTAACGCCCAACTC
ACATCATACTGTTCTTTTCAAGCCTCACATCATGCAGAACAAAACGCCCC
TCCCTTACCCGGACAAATATAAAGACCGCTGGGATAAAGACCACGTTCGC
ATGCCTTGCTCACCCGAGAATTTATACCCTACTCGTGATAAGAAAGTTCA
AAATAGATGGGAACTAGTCGAGACAACTTTACTGCAAACGTTTTCTTCTT
CTAATGATCTTGAAGAAGCAATCCTTGTTTACAATCATCACTACAAAGAT
AAGTGGAATTTTCATTCCTGGCATAGCTATTGTAATATTGTTCTAGATGC
TGTTCAAAGGGAGGAACTATTCTCAACGCTACTCCCTGGTATTGTCAATC
TAGCTCTTCAGCTGCCTAACGTAGTTACCCAGCCACCCAAACTCCTCAAG
CAAGGATGCGATCACACCATGACATTCTCACAACATCAAATCGCTTGTTT
ACTGGCCAACGCCTTCTTTTGCACTTTCCCGCGTCGCAATTCATTGAAGA
GTTCCGAATATTGTAACTATCCGGATATCAATTTCAGCCGGGTATTTCGT
GGTATCCATGACGTTGTCAACGAAGTGAAAACTGAAAAACTGAAATGTAT
TTTGAATTATTTCCGTCGTGTTTTACTTGATATGCCGACAGGTACGGTAA
CTTTTCACCGGAAAGTTCTTAACGAGAGCGATTTCCCAGACTGGGAGAAC
TCGGGCGTTGAATTCGGTGATCTGTATGTAACAAGTGATGGATCCATTGA
AGTTGAAGGTGAAGGCTTTTTACAGGTTGATTTTGCGAATCGAATGATTG
GAGGAGGCGTTGTTGGGAACGGTTGTGTTCAAGAAGAAATCCGATTTTTG
TTATGTCCGGAAATGATTGTTGCCCGGCTTTTTACGGAAAAGCTTAATGC
CAATGAGAGCTTGTTGATTATCGGCGCTGAAAGGTATAACTCTTATTCAG
GATACGCGTCCACGTTCAAATTTACGggaaatttcaatgattttacgGCA
CGAGACCGTTGGGGTAGACGGTACTGTGAAATGGTCGCAATAGACGCACA
TGTTTTTCACTGTTACAAGGATCAGTTCAAAGGACCTAGTTTAAAACGTG
AACTTGTGAAAGCGTACTGTGGCTTCCGTCAAAAAGCACAACAAGCTAAA
ATAGCAGTCGCCACTGGTAATTGGGGTTGCGGTGCTTTTGGAGGGGACGT
GTACTTAAAATCGTTGCTACAACTGATCGCAGCGTCGCAGTCTGGTCGAG
ATATTGTTTATTTCACATTTCGTGACGAAGGACTTGTCGAAAAATTACGA
AACATGCATGAGTACTTACGTAAAAATAAAGTAACCATCGGCAAATTATG
GTCGTATTTAGTTAAATACGGGAACATATTGAAATCGAATACGGAACATG
TTCCGTTGTACCCTTATTTGAAAGACTTGCATGAAAAGTATGAGGCAATA
ACAGACGATGATGCTAGCTCATGTAATGAGGATAACCCACTTGAAATACG
AGGTGTTCCGTGTGAAATACCATCCGATATGTCGCCTCTTTCACCTGATT
ATGCCGGTGATACACCGTGAGTGAAGATTGGTGTGATGATTTACTTTTAT
AAAGGGTATTTATGTCAACAAAAACATGTAAAAGACATTTTTGTTTGTAA
GTTAGTGTAATGTATATTATATTTGTATTGTTTAATTGACGAATCGTTTG
AAAACCTTCTTTTTCCTCCAGATAATTTGAGAGAAtgattcattttcaaa
tttcaatttcatttgcTAATATAAATTTCACTAAGCGTCCTAAGTTAAAG
GAGCACAAGAGTATCCAGGCCTATCGCTCTATTAAACCCCTCATCCTGTA
TTGAGCAATTATCTGAAGGTTCCTAGTCAATTTCTActgaaagtattttt
ttattttatacttttCTTCGAccctttttttagttttgttgtATATTATA
GGTGACTAAAGCTATGAATGGTTTCTAATAGAAAACCTTATTAAACTGTC
CTGCTttccatgtttcaaaaaatgaaaaatgctaTGTTTTCCAAGTATAT
ACAACATTATATATTTTGCTAACAAATCTACTACGAGGTTACAAGATTTT
TGGCTACATATAAATgagaattaaaggttttgtttttaaataagagtgat
ctcgtttgcttactcatcaattttaattcacaagctttttcgcattggat
tgacacggatgtagAGCCAAAACTGGCCAGAAAGTggggaaaaaacattt
tttgcttatatcagcataaaataacaaaaggcagacactgATATGAAATN
agggaaaaaaacattttttgcttatatcagcataaaataacaaaaagcat
gcactgatatgaaatatgtgtctgatatgaaacgggaacacttatgtcaa
aacaaaacctttaagtaccttcgtattttatatatttttacctTTCACGA
AATTTAATTCTTAAAATAAACTGACAGTAATTGAAGGCAGAAAAATATGC
CCGATATATAAGAAAATGTTATAACACTCTTACAATATAAATTGATTTTG
CTAATCTCTATGATCTTATATAAAAGATACGAAAATAATCCAAGTCTTAG
CACAACAAAGGTTAAcaagtagaaaattttgttgaaaatggcCAGTTTAG
TTTTCCTCATTTTAGCTTCTTTTAGCAGATTACCAAATCGTAAGAATTGG
TTTGTAAACTCGATTATCCAAATCAGAGTTATAGCTTCTAGAGTTCCAGA
TTCACAGTAGAGACAACAGAATAATGAGCTTAGCGAGACCAAATTCAGGA
ACATGGTTGCTGCGTTTTGCTTAGTGTTTCGTTGGAAGAAGTAAGATAGA
ATTTGGAACAAATTGTAAGATGTTTGGAAATAGATGATAGTTTTCTCGCT
AACTTGGTCGATAGTACTGATTGTTGTTGATTTCGTTTCGTTGCCAATTT
GGTTCAAAGGGATTTCACCGGATTCGTAAGCAAGGTATTCGATTAATCTA
CACACTGTGAAACTCTGCATATAATTGATGAGCTTATGCGTAAATTTAGA
CTGGATGCCAAAAAGCCAGATTAGACTTCCAAGTATGATTTTGAGCGCAA
CCCAACATAAAACGCCAAATGATAAGACTTGTGATAACTCAACCAGTTTT
TCATCGTAAAGGAATTTACGTGTCGAGTTTTTGATAAGTTTAAACTGATC
AGGCTTGATCAAATCACGTgcgtaaatttccaaaaaattaccAATTTCCA
TAACGGCTGTAAATAAGATTGACTTTCGCTGTCTTTacaccaaaaaaata
attttaaaactaaCTAGGTCAAATTTGTATGTACGCTTTATAGTTGTTAT
TTTTAACTGATGGATTAAAAcctttctgttttttttagtCGAGAAAGCCT
CTATTGAAATTTAGTGGTTTTTGGAGGCTGGTAACTAGCAGTCATTGA

Run BLAST on NCBI

protein sequence of TCONS_00067630-protein

>TCONS_00067630-protein ID=TCONS_00067630-protein|Name=TCONS_00067630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=687bp
MSDRGVIESNGTDQKPPIATSDEPSSQKRKTKQISLSDYFTKRRKMSTTN
NEKTETEDSSDASKREILASAAERRLNNPIKRSVSLLDESEAEKRLSVVT
KETSSVVPSNHENDDNVVKTNSSENENSSSKEEEEETKQTKVEIPPHFNR
SPYCYDALPSLTPNSHHTVLFKPHIMQNKTPLPYPDKYKDRWDKDHVRMP
CSPENLYPTRDKKVQNRWELVETTLLQTFSSSNDLEEAILVYNHHYKDKW
NFHSWHSYCNIVLDAVQREELFSTLLPGIVNLALQLPNVVTQPPKLLKQG
CDHTMTFSQHQIACLLANAFFCTFPRRNSLKSSEYCNYPDINFSRVFRGI
HDVVNEVKTEKLKCILNYFRRVLLDMPTGTVTFHRKVLNESDFPDWENSG
VEFGDLYVTSDGSIEVEGEGFLQVDFANRMIGGGVVGNGCVQEEIRFLLC
PEMIVARLFTEKLNANESLLIIGAERYNSYSGYASTFKFTGNFNDFTARD
RWGRRYCEMVAIDAHVFHCYKDQFKGPSLKRELVKAYCGFRQKAQQAKIA
VATGNWGCGAFGGDVYLKSLLQLIAASQSGRDIVYFTFRDEGLVEKLRNM
HEYLRKNKVTIGKLWSYLVKYGNILKSNTEHVPLYPYLKDLHEKYEAITD
DDASSCNEDNPLEIRGVPCEIPSDMSPLSPDYAGDTP

Run BLAST on NCBI

transcript from alignment at scaffold_472:14675..21649+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00067630 ID=TCONS_00067630|Name=TCONS_00067630|organism=Clytia hemisphaerica|type=transcript|length=6975bp|location=Sequence derived from alignment at scaffold_472:14675..21649+ (Clytia hemisphaerica)
tttcagcaacaataagaaataatagaattacaaacaaaatcaTAACAATA
TGAATAATGAGTGACCGTGGAGTGATTGAAAGTAACGGTACCGACCAGAA
ACCACCCATTGCAACATCAGATGAACCATCCAGTCAAAAGAGGAAAACCA
AACAAATTAGTCTGAGTGATTATTTCACGAAACGAAGAAAAATGTCAACT
ACCAACAACGAGAAAACTGGTGTgggatttttttaaaatttttatttata
tactTTAATTTGATTTAATTGCTAATAAGCAAGGAGCAAGAAAGTTTTTG
GATGCTTTAAGTAAGAACTTATAAGGTCAGAAACCCCTCCAAATTTCCCT
TGTAAATTActtttcaagtttgaaatttttcacttttaaaatgaaataaa
ccagccgaggctggaaggtcagccaatagagcttagctagatagctttaa
taagtgggctaacaaacagatgtaagagatgtactgaaacagagtagact
aaaaatgttgaataatgtacaaaatgtgaaacatttgataacttgattta
aaattattcaaaacaagcCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNcatttgtcataattttgcaagtccaa
taataggagatgtgatgtcatcatttggttcccgtcatctgaccgccCCT
Gatatttacggtcagcaggtagttggagagtcggaaagtttttccgctgc
tttgctggatttccactgtcgacctctgcacgctctgtgtttacaagttt
tcaaatcgaagtagcgagccgcatgctaatNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNccacggtttctcaatttcttaattcagatcagtccacacgggtacg
gattccctttcaacaagatgtatatAGCTGCTTCttgaaaggaaaatatt
ttcgacaaactgacccccactttttaaagtagaaatgacgggaaccaaac
aattttttgcgattcgccttatcaaacatGTCCAAgcaaaccaagtccaa
aaaagcacgattgcatccagtctctatcaaatttagacagtatctgtact
tttgtaaactttatcaaattccaataacattataacatcatcaatcccac
ctagaggcaaacaagaaaaatatgtttttattgcaaaaactaataaaaag
cagcaataaaaagtatcagaaaattcaacataaacaaaaactNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtaga
aaaagaatccccttgatgaaaatcatgtgtttgatttgccgagttaaaaa
aataaatgacagaaattgaagcttgcaacagatttacactgaaaattttt
tttgccgtcttatgatgatggaagaagaaatgaattttacggatttgaat
gctcagcttaggctgaccaattagagCCAAATGCAAGAACCCATTTTCAG
AGAATTCAAATCATCATAATCTATGATCTTTGGTCCAGAGTCAATTCAGT
TCAGATCTCATTCATTATGACTTATGTGGTGGCATACCAAAATTACTTAA
AATccttttagtattatactaaaCTACCAAAATGGACTGGTTATCAAAGG
GAGATTTGGGAAGGATTAGGGTACTATAATCGACAATATTTGTTGTTTTT
GCAAtgcttttcttattttttttccaaaaaaaggcccAAACCATCTGATA
ATTCTTTGTTTGGGTAAAATGTCTTCCACTTTAATGTATCTGCTAATTAG
ACcttaaaagtttgaatttcGAACTATTACTGAGCTATTGAAGAATATAA
AGAATTATTAGTTAATTATTAATTTAAAATGTTCCTCCTTTTCTAGAAAC
CGAAGATTCAAGTGATGCATCCAAGCGCGAGATATTGGCATCCGCCGCTG
AACGTCGTCTCAACAACCCTATCAAACGTAGTGTATCTCTTCTCGACGAA
TCAGAGGCCGAGAAACGTCTTTCGGTTGTTACTAAAGAGACGTCATCCGT
TGTTCCTTCAAACCATGAAAATGACGATAACGTTGTAAAAACAAACAGCT
CCGAAAATGAAAACTCGTCCTCGAAAGAGGAGGAAGAAGAAACAAAGCAA
ACGAAAGTTGAAATCCCGCCCCATTTTAACCGATCGCCATATTGTTATGA
CGCCCTACCATCGTTAACGCCCAACTCACATCATACTGTTCTTTTCAAGC
CTCACATCATGCAGAACAAAACGCCCCTCCCTTACCCGGACAAATATAAA
GACCGCTGGGATAAAGACCACGTTCGCATGCCTTGCTCACCCGAGAATTT
ATACCCTACTCGTGATAAGAAAGTTCAAAATAGATGGGAACTAGTCGAGA
CAACTTTACTGCAAACGTTTTCTTCTTCTAATGATCTTGAAGAAGCAATC
CTTGTTTACAATCATCACTACAAAGATAAGTGGAATTTTCATTCCTGGCA
TAGCTATTGTAATATTGTTCTAGATGCTGTTCAAAGGGAGGAACTATTCT
CAACGCTACTCCCTGGTATTGTCAATCTAGCTCTTCAGCTGCCTAACGTA
GTTACCCAGCCACCCAAACTCCTCAAGCAAGGATGCGATCACACCATGAC
ATTCTCACAACATCAAATCGCTTGTTTACTGGCCAACGCCTTCTTTTGCA
CTTTCCCGCGTCGCAATTCATTGAAGAGTTCCGAATATTGTAACTATCCG
GATATCAATTTCAGCCGGGTATTTCGTGGTATCCATGACGTTGTCAACGA
AGTGAAAACTGAAAAACTGAAATGTATTTTGAATTATTTCCGTCGTGTTT
TACTTGATATGCCGACAGGTACGGTAACTTTTCACCGGAAAGTTCTTAAC
GAGAGCGATTTCCCAGACTGGGAGAACTCGGGCGTTGAATTCGGTGATCT
GTATGTAACAAGTGATGGATCCATTGAAGTTGAAGGTGAAGGCTTTTTAC
AGGTTGATTTTGCGAATCGAATGATTGGAGGAGGCGTTGTTGGGAACGGT
TGTGTTCAAGAAGAAATCCGATTTTTGTTATGTCCGGAAATGATTGTTGC
CCGGCTTTTTACGGAAAAGCTTAATGCCAATGAGAGCTTGTTGATTATCG
GCGCTGAAAGGTATAACTCTTATTCAGGATACGCGTCCACGTTCAAATTT
ACGggaaatttcaatgattttacgGCACGAGACCGTTGGGGTAGACGGTA
CTGTGAAATGGTCGCAATAGACGCACATGTTTTTCACTGTTACAAGGATC
AGTTCAAAGGACCTAGTTTAAAACGTGAACTTGTGAAAGCGTACTGTGGC
TTCCGTCAAAAAGCACAACAAGCTAAAATAGCAGTCGCCACTGGTAATTG
GGGTTGCGGTGCTTTTGGAGGGGACGTGTACTTAAAATCGTTGCTACAAC
TGATCGCAGCGTCGCAGTCTGGTCGAGATATTGTTTATTTCACATTTCGT
GACGAAGGACTTGTCGAAAAATTACGAAACATGCATGAGTACTTACGTAA
AAATAAAGTAACCATCGGCAAATTATGGTCGTATTTAGTTAAATACGGGA
ACATATTGAAATCGAATACGGAACATGTTCCGTTGTACCCTTATTTGAAA
GACTTGCATGAAAAGTATGAGGCAATAACAGACGATGATGCTAGCTCATG
TAATGAGGATAACCCACTTGAAATACGAGGTGTTCCGTGTGAAATACCAT
CCGATATGTCGCCTCTTTCACCTGATTATGCCGGTGATACACCGTGAGTG
AAGATTGGTGTGATGATTTACTTTTATAAAGGGTATTTATGTCAACAAAA
ACATGTAAAAGACATTTTTGTTTGTAAGTTAGTGTAATGTATATTATATT
TGTATTGTTTAATTGACGAATCGTTTGAAAACCTTCTTTTTCCTCCAGAT
AATTTGAGAGAAtgattcattttcaaatttcaatttcatttgcTAATATA
AATTTCACTAAGCGTCCTAAGTTAAAGGAGCACAAGAGTATCCAGGCCTA
TCGCTCTATTAAACCCCTCATCCTGTATTGAGCAATTATCTGAAGGTTCC
TAGTCAATTTCTActgaaagtatttttttattttatacttttCTTCGAcc
ctttttttagttttgttgtATATTATAGGTGACTAAAGCTATGAATGGTT
TCTAATAGAAAACCTTATTAAACTGTCCTGCTttccatgtttcaaaaaat
gaaaaatgctaTGTTTTCCAAGTATATACAACATTATATATTTTGCTAAC
AAATCTACTACGAGGTTACAAGATTTTTGGCTACATATAAATgagaatta
aaggttttgtttttaaataagagtgatctcgtttgcttactcatcaattt
taattcacaagctttttcgcattggattgacacggatgtagAGCCAAAAC
TGGCCAGAAAGTggggaaaaaacattttttgcttatatcagcataaaata
acaaaaggcagacactgATATGAAATNagggaaaaaaacattttttgctt
atatcagcataaaataacaaaaagcatgcactgatatgaaatatgtgtct
gatatgaaacgggaacacttatgtcaaaacaaaacctttaagtaccttcg
tattttatatatttttacctTTCACGAAATTTAATTCTTAAAATAAACTG
ACAGTAATTGAAGGCAGAAAAATATGCCCGATATATAAGAAAATGTTATA
ACACTCTTACAATATAAATTGATTTTGCTAATCTCTATGATCTTATATAA
AAGATACGAAAATAATCCAAGTCTTAGCACAACAAAGGTTAAcaagtaga
aaattttgttgaaaatggcCAGTTTAGTTTTCCTCATTTTAGCTTCTTTT
AGCAGATTACCAAATCGTAAGAATTGGTTTGTAAACTCGATTATCCAAAT
CAGAGTTATAGCTTCTAGAGTTCCAGATTCACAGTAGAGACAACAGAATA
ATGAGCTTAGCGAGACCAAATTCAGGAACATGGTTGCTGCGTTTTGCTTA
GTGTTTCGTTGGAAGAAGTAAGATAGAATTTGGAACAAATTGTAAGATGT
TTGGAAATAGATGATAGTTTTCTCGCTAACTTGGTCGATAGTACTGATTG
TTGTTGATTTCGTTTCGTTGCCAATTTGGTTCAAAGGGATTTCACCGGAT
TCGTAAGCAAGGTATTCGATTAATCTACACACTGTGAAACTCTGCATATA
ATTGATGAGCTTATGCGTAAATTTAGACTGGATGCCAAAAAGCCAGATTA
GACTTCCAAGTATGATTTTGAGCGCAACCCAACATAAAACGCCAAATGAT
AAGACTTGTGATAACTCAACCAGTTTTTCATCGTAAAGGAATTTACGTGT
CGAGTTTTTGATAAGTTTAAACTGATCAGGCTTGATCAAATCACGTgcgt
aaatttccaaaaaattaccAATTTCCATAACGGCTGTAAATAAGATTGAC
TTTCGCTGTCTTTacaccaaaaaaataattttaaaactaaCTAGGTCAAA
TTTGTATGTACGCTTTATAGTTGTTATTTTTAACTGATGGATTAAAAcct
ttctgttttttttagtCGAGAAAGCCTCTATTGAAATTTAGTGGTTTTTG
GAGGCTGGTAACTAGCAGTCATTGA

Coding sequence (CDS) from alignment at scaffold_472:14675..21649+

>TCONS_00067630 ID=TCONS_00067630|Name=TCONS_00067630|organism=Clytia hemisphaerica|type=CDS|length=4128bp|location=Sequence derived from alignment at scaffold_472:14675..21649+ (Clytia hemisphaerica)
ATGAGTGACCGTGGAGTGATTGAAAGTAACGGTACCGACCAGAAACCACC
CATTGCAACATCAGATGAACCATCCAGTCAAAAGAGGAAAACCAAACAAA
TTAGTCTGAGTGATTATTTCACGAAACGAAGAAAAATGTCAACTACCAAC
AACGAGAAAACTGAAACCGAAGATTCAAGTGATGCATCCAAGCGCGAGAT
ATTGGCATCCGCCGCTGAACGTCGTCTCAACAACCCTATCAAACGTAGTG
TATCTCTTCTCGACGAATCAGAGGCCGAGAAACGTCTTTCGGTTGTTACT
AAAGAGACGTCATCCGTTGTTCCTTCAAACCATGAAAATGACGATAACGT
TGTAAAAACAAACAGCTCCGAAAATGAAAACTCGTCCTCGAAAGAGGAGG
AAGAAGAAACAAAGCAAACGAAAGTTGAAATCCCGCCCCATTTTAACCGA
TCGCCATATTGTTATGACGCCCTACCATCGTTAACGCCCAACTCACATCA
TACTGTTCTTTTCAAGCCTCACATCATGCAGAACAAAACGCCCCTCCCTT
ACCCGGACAAATATAAAGACCGCTGGGATAAAGACCACGTTCGCATGCCT
TGCTCACCCGAGAATTTATACCCTACTCGTGATAAGAAAGTTCAAAATAG
ATGGGAACTAGTCGAGACAACTTTACTGCAAACGTTTTCTTCTTCTAATG
ATCTTGAAGAAGCAATCCTTGTTTACAATCATCACTACAAAGATAAGTGG
AATTTTCATTCCTGGCATAGCTATTGTAATATTGTTCTAGATGCTGTTCA
AAGGGAGGAACTATTCTCAACGCTACTCCCTGGTATTGTCAATCTAGCTC
TTCAGCTGCCTAACGTAGTTACCCAGCCACCCAAACTCCTCAAGCAAGGA
TGCGATCACACCATGACATTCTCACAACATCAAATCGCTTGTTTACTGGC
CAACGCCTTCTTTTGCACTTTCCCGCGTCGCAATTCATTGAAGAGTTCCG
AATATTGTAACTATCCGGATATCAATTTCAGCCGGGTATTTCGTGGTATC
CATGACGTTGTCAACGAAGTGAAAACTGAAAAACTGAAATGTATTTTGAA
TTATTTCCGTCGTGTTTTACTTGATATGCCGACAGGTACGGTAACTTTTC
ACCGGAAAGTTCTTAACGAGAGCGATTTCCCAGACTGGGAGAACTCGGGC
GTTGAATTCGGTGATCTGTATGTAACAAGTGATGGATCCATTGAAGTTGA
AGGTGAAGGCTTTTTACAGGTTGATTTTGCGAATCGAATGATTGGAGGAG
GCGTTGTTGGGAACGGTTGTGTTCAAGAAGAAATCCGATTTTTGTTATGT
CCGGAAATGATTGTTGCCCGGCTTTTTACGGAAAAGCTTAATGCCAATGA
GAGCTTGTTGATTATCGGCGCTGAAAGGTATAACTCTTATTCAGGATACG
CGTCCACGTTCAAATTTACGggaaatttcaatgattttacgGCACGAGAC
CGTTGGGGTAGACGGTACTGTGAAATGGTCGCAATAGACGCACATGTTTT
TCACTGTTACAAGGATCAGTTCAAAGGACCTAGTTTAAAACGTGAACTTG
TGAAAGCGTACTGTGGCTTCCGTCAAAAAGCACAACAAGCTAAAATAGCA
GTCGCCACTGGTAATTGGGGTTGCGGTGCTTTTGGAGGGGACGTGTACTT
AAAATCGTTGCTACAACTGATCGCAGCGTCGCAGTCTGGTCGAGATATTG
TTTATTTCACATTTCGTGACGAAGGACTTGTCGAAAAATTACGAAACATG
CATGAGTACTTACGTAAAAATAAAGTAACCATCGGCAAATTATGGTCGTA
TTTAGTTAAATACGGGAACATATTGAAATCGAATACGGAACATGTTCCGT
TGTACCCTTATTTGAAAGACTTGCATGAAAAGTATGAGGCAATAACAGAC
GATGATGCTAGCTCATGTAATGAGGATAACCCACTTGAAATACGAGGTGT
TCCGTGTGAAATACCATCCGATATGTCGCCTCTTTCACCTGATTATGCCG
GTGATACACCGTGAATGAGTGACCGTGGAGTGATTGAAAGTAACGGTACC
GACCAGAAACCACCCATTGCAACATCAGATGAACCATCCAGTCAAAAGAG
GAAAACCAAACAAATTAGTCTGAGTGATTATTTCACGAAACGAAGAAAAA
TGTCAACTACCAACAACGAGAAAACTGAAACCGAAGATTCAAGTGATGCA
TCCAAGCGCGAGATATTGGCATCCGCCGCTGAACGTCGTCTCAACAACCC
TATCAAACGTAGTGTATCTCTTCTCGACGAATCAGAGGCCGAGAAACGTC
TTTCGGTTGTTACTAAAGAGACGTCATCCGTTGTTCCTTCAAACCATGAA
AATGACGATAACGTTGTAAAAACAAACAGCTCCGAAAATGAAAACTCGTC
CTCGAAAGAGGAGGAAGAAGAAACAAAGCAAACGAAAGTTGAAATCCCGC
CCCATTTTAACCGATCGCCATATTGTTATGACGCCCTACCATCGTTAACG
CCCAACTCACATCATACTGTTCTTTTCAAGCCTCACATCATGCAGAACAA
AACGCCCCTCCCTTACCCGGACAAATATAAAGACCGCTGGGATAAAGACC
ACGTTCGCATGCCTTGCTCACCCGAGAATTTATACCCTACTCGTGATAAG
AAAGTTCAAAATAGATGGGAACTAGTCGAGACAACTTTACTGCAAACGTT
TTCTTCTTCTAATGATCTTGAAGAAGCAATCCTTGTTTACAATCATCACT
ACAAAGATAAGTGGAATTTTCATTCCTGGCATAGCTATTGTAATATTGTT
CTAGATGCTGTTCAAAGGGAGGAACTATTCTCAACGCTACTCCCTGGTAT
TGTCAATCTAGCTCTTCAGCTGCCTAACGTAGTTACCCAGCCACCCAAAC
TCCTCAAGCAAGGATGCGATCACACCATGACATTCTCACAACATCAAATC
GCTTGTTTACTGGCCAACGCCTTCTTTTGCACTTTCCCGCGTCGCAATTC
ATTGAAGAGTTCCGAATATTGTAACTATCCGGATATCAATTTCAGCCGGG
TATTTCGTGGTATCCATGACGTTGTCAACGAAGTGAAAACTGAAAAACTG
AAATGTATTTTGAATTATTTCCGTCGTGTTTTACTTGATATGCCGACAGG
TACGGTAACTTTTCACCGGAAAGTTCTTAACGAGAGCGATTTCCCAGACT
GGGAGAACTCGGGCGTTGAATTCGGTGATCTGTATGTAACAAGTGATGGA
TCCATTGAAGTTGAAGGTGAAGGCTTTTTACAGGTTGATTTTGCGAATCG
AATGATTGGAGGAGGCGTTGTTGGGAACGGTTGTGTTCAAGAAGAAATCC
GATTTTTGTTATGTCCGGAAATGATTGTTGCCCGGCTTTTTACGGAAAAG
CTTAATGCCAATGAGAGCTTGTTGATTATCGGCGCTGAAAGGTATAACTC
TTATTCAGGATACGCGTCCACGTTCAAATTTACGggaaatttcaatgatt
ttacgGCACGAGACCGTTGGGGTAGACGGTACTGTGAAATGGTCGCAATA
GACGCACATGTTTTTCACTGTTACAAGGATCAGTTCAAAGGACCTAGTTT
AAAACGTGAACTTGTGAAAGCGTACTGTGGCTTCCGTCAAAAAGCACAAC
AAGCTAAAATAGCAGTCGCCACTGGTAATTGGGGTTGCGGTGCTTTTGGA
GGGGACGTGTACTTAAAATCGTTGCTACAACTGATCGCAGCGTCGCAGTC
TGGTCGAGATATTGTTTATTTCACATTTCGTGACGAAGGACTTGTCGAAA
AATTACGAAACATGCATGAGTACTTACGTAAAAATAAAGTAACCATCGGC
AAATTATGGTCGTATTTAGTTAAATACGGGAACATATTGAAATCGAATAC
GGAACATGTTCCGTTGTACCCTTATTTGAAAGACTTGCATGAAAAGTATG
AGGCAATAACAGACGATGATGCTAGCTCATGTAATGAGGATAACCCACTT
GAAATACGAGGTGTTCCGTGTGAAATACCATCCGATATGTCGCCTCTTTC
ACCTGATTATGCCGGTGATACACCGTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_042239	XLOC_042239	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00067630-protein	TCONS_00067630-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00067630-exon-scaffold_472-1491911889:14675..14893	TCONS_00067630-exon-scaffold_472-1491911889:14675..14893	Clytia hemisphaerica	exon
TCONS_00067630-exon-scaffold_472-1510915933:14675..14893	TCONS_00067630-exon-scaffold_472-1510915933:14675..14893	Clytia hemisphaerica	exon
TCONS_00067630-exon-scaffold_472-1575043694:14675..14893	TCONS_00067630-exon-scaffold_472-1575043694:14675..14893	Clytia hemisphaerica	exon
TCONS_00067630-exon-scaffold_472-1491911889:17871..21649	TCONS_00067630-exon-scaffold_472-1491911889:17871..21649	Clytia hemisphaerica	exon
TCONS_00067630-exon-scaffold_472-1510915933:17871..21649	TCONS_00067630-exon-scaffold_472-1510915933:17871..21649	Clytia hemisphaerica	exon
TCONS_00067630-exon-scaffold_472-1575043694:17871..21649	TCONS_00067630-exon-scaffold_472-1575043694:17871..21649	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_472	supercontig	scaffold_472:14675..21649 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
51.9254	49.7213	17.4281	12.4271	15.2355	13.0857	12.084	14.7517	7.06649	9.37974	6.47386	6.05814	3.84993	4.01781	4.80828	5.90829	11.6915	7.76166	3.50525	3.91807	11.313	11.603	34.0604	30.5202	9.42313	11.6009	4.79313	4.23772	19.5986	22.9648

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR007724	Poly_GlycHdrlase

Vocabulary: **Molecular Function**
Term	Definition
GO:0004649	poly(ADP-ribose) glycohydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004649	poly(ADP-ribose) glycohydrolase activity

Blast

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BLAST of TCONS_00067630 vs. Swiss-Prot (Human)
Match: PARG (Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1)

HSP 1 Score: 467.618 bits (1202), Expect = 2.988e-144
Identity = 243/520 (46.73%), Postives = 335/520 (64.42%), Query Frame = 3

Query:  486 IPPHFN--------------RSPYCYDALPSLTPNSHHTVLFKPHIMQ-NKTPLPYPDKYKDRWDKDHVRMPCSPENLYPTRD----KKVQNRWELVETTLLQTFSSSNDLEEAILVYNHHYKDKWNFHSWHSYCNIVLDAVQREELFSTLLPGIVNLALQLPNVVTQPPKLLKQGCDHTMTFSQHQIACLLANAFFCTFPRRNSLKSSEYCNYPDINFSRVFRGIHDVVNEVKTEKLKCILNYFRRVLLDMPTGTVTFHRKVLNESDFPDWENSGVEFGDLYVTSDGSIEVEGEGFLQVDFANRMIGGGVVGNGCVQEEIRFLLCPEMIVARLFTEKLNANESLLIIGAERYNSYSGYASTFKFTGNFNDFTARDRWGRRYCEMVAIDAHVFHCYKDQFKGPSLKRELVKAYCGFRQKAQQAK--IAVATGNWGCGAFGGDVYLKSLLQLIAASQSGRDIVYFTFRDEGLVEKLRNMHEYLRKNKVTIGKLWSYLVKYGNILKSNTE----HVPLYPYL 1970
            +PPH +              R P C   LP L P+++HTV  +  +++  + P P+P  YKD WD  HV+MPCS +NLYP  D    +   +RWEL++T LL  F+   +L++AIL YN  Y  KW+F +   + + VL+  + + L+ ++LP +V +AL LPN+ TQP  LLKQ  +H++T SQ QIA LLANAFFCTFPRRN+   SEY +YPDINF+R+F G     +  K EKLK +  YFRRV    PTG VTF R+ L   DFP+WE        L+VT +G+IE  G+G LQVDFANR +GGGV   G VQEEIRFL+ PE+I++RLFTE L+ NE L+I G E+Y+ Y+GYA T++++ +  D + RD W RR  E+VAIDA  F  Y DQF    ++REL KAYCGF +    ++   AVATGNWGCGAFGGD  LK+L+Q++AA+ + RD+VYFTF D  L+  + +MH +L + K+T+G ++  L++Y N    N       + LYP++
Sbjct:  443 VPPHLSPDKKWLGTPIEEMRRMPRCGIRLPLLRPSANHTVTIRVDLLRAGEVPKPFPTHYKDLWDNKHVKMPCSEQNLYPVEDENGERTAGSRWELIQTALLNKFTRPQNLKDAILKYNVAYSKKWDFTALIDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKMKSEYSSYPDINFNRLFEG----RSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFPEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANRFVGGGVTSAGLVQEEIRFLINPELIISRLFTEVLDHNECLIITGTEQYSEYTGYAETYRWSRSHEDGSERDDWQRRCTEIVAIDALHFRRYLDQFVPEKMRRELNKAYCGFLRPGVSSENLSAVATGNWGCGAFGGDARLKALIQILAAAAAERDVVYFTFGDSELMRDIYSMHIFLTERKLTVGDVYKLLLRYYNEECRNCSTPGPDIKLYPFI 956

The following BLAST results are available for this feature:

BLAST of TCONS_00067630 vs. Swiss-Prot (Human)

BLAST of TCONS_00067630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PARG	2.988e-144	46.73	Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN...	[more]

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TCONS_00067630 (transcript) - C. hemisphaerica