XLOC_042239 (gene) - C. hemisphaerica

Overview
NameXLOC_042239
Unique NameXLOC_042239
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_472:14675..21649+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042239 ID=XLOC_042239|Name=XLOC_042239|organism=Clytia hemisphaerica|type=gene|length=6975bp|location=Sequence derived from alignment at scaffold_472:14675..21649+ (Clytia hemisphaerica)
tttcagcaacaataagaaataatagaattacaaacaaaatcaTAACAATA TGAATAATGAGTGACCGTGGAGTGATTGAAAGTAACGGTACCGACCAGAA ACCACCCATTGCAACATCAGATGAACCATCCAGTCAAAAGAGGAAAACCA AACAAATTAGTCTGAGTGATTATTTCACGAAACGAAGAAAAATGTCAACT ACCAACAACGAGAAAACTGGTGTgggatttttttaaaatttttatttata tactTTAATTTGATTTAATTGCTAATAAGCAAGGAGCAAGAAAGTTTTTG GATGCTTTAAGTAAGAACTTATAAGGTCAGAAACCCCTCCAAATTTCCCT TGTAAATTActtttcaagtttgaaatttttcacttttaaaatgaaataaa ccagccgaggctggaaggtcagccaatagagcttagctagatagctttaa taagtgggctaacaaacagatgtaagagatgtactgaaacagagtagact aaaaatgttgaataatgtacaaaatgtgaaacatttgataacttgattta aaattattcaaaacaagcCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNcatttgtcataattttgcaagtccaa taataggagatgtgatgtcatcatttggttcccgtcatctgaccgccCCT Gatatttacggtcagcaggtagttggagagtcggaaagtttttccgctgc tttgctggatttccactgtcgacctctgcacgctctgtgtttacaagttt tcaaatcgaagtagcgagccgcatgctaatNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNccacggtttctcaatttcttaattcagatcagtccacacgggtacg gattccctttcaacaagatgtatatAGCTGCTTCttgaaaggaaaatatt ttcgacaaactgacccccactttttaaagtagaaatgacgggaaccaaac aattttttgcgattcgccttatcaaacatGTCCAAgcaaaccaagtccaa aaaagcacgattgcatccagtctctatcaaatttagacagtatctgtact tttgtaaactttatcaaattccaataacattataacatcatcaatcccac ctagaggcaaacaagaaaaatatgtttttattgcaaaaactaataaaaag cagcaataaaaagtatcagaaaattcaacataaacaaaaactNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtaga aaaagaatccccttgatgaaaatcatgtgtttgatttgccgagttaaaaa aataaatgacagaaattgaagcttgcaacagatttacactgaaaattttt tttgccgtcttatgatgatggaagaagaaatgaattttacggatttgaat gctcagcttaggctgaccaattagagCCAAATGCAAGAACCCATTTTCAG AGAATTCAAATCATCATAATCTATGATCTTTGGTCCAGAGTCAATTCAGT TCAGATCTCATTCATTATGACTTATGTGGTGGCATACCAAAATTACTTAA AATccttttagtattatactaaaCTACCAAAATGGACTGGTTATCAAAGG GAGATTTGGGAAGGATTAGGGTACTATAATCGACAATATTTGTTGTTTTT GCAAtgcttttcttattttttttccaaaaaaaggcccAAACCATCTGATA ATTCTTTGTTTGGGTAAAATGTCTTCCACTTTAATGTATCTGCTAATTAG ACcttaaaagtttgaatttcGAACTATTACTGAGCTATTGAAGAATATAA AGAATTATTAGTTAATTATTAATTTAAAATGTTCCTCCTTTTCTAGAAAC CGAAGATTCAAGTGATGCATCCAAGCGCGAGATATTGGCATCCGCCGCTG AACGTCGTCTCAACAACCCTATCAAACGTAGTGTATCTCTTCTCGACGAA TCAGAGGCCGAGAAACGTCTTTCGGTTGTTACTAAAGAGACGTCATCCGT TGTTCCTTCAAACCATGAAAATGACGATAACGTTGTAAAAACAAACAGCT CCGAAAATGAAAACTCGTCCTCGAAAGAGGAGGAAGAAGAAACAAAGCAA ACGAAAGTTGAAATCCCGCCCCATTTTAACCGATCGCCATATTGTTATGA CGCCCTACCATCGTTAACGCCCAACTCACATCATACTGTTCTTTTCAAGC CTCACATCATGCAGAACAAAACGCCCCTCCCTTACCCGGACAAATATAAA GACCGCTGGGATAAAGACCACGTTCGCATGCCTTGCTCACCCGAGAATTT ATACCCTACTCGTGATAAGAAAGTTCAAAATAGATGGGAACTAGTCGAGA CAACTTTACTGCAAACGTTTTCTTCTTCTAATGATCTTGAAGAAGCAATC CTTGTTTACAATCATCACTACAAAGATAAGTGGAATTTTCATTCCTGGCA TAGCTATTGTAATATTGTTCTAGATGCTGTTCAAAGGGAGGAACTATTCT CAACGCTACTCCCTGGTATTGTCAATCTAGCTCTTCAGCTGCCTAACGTA GTTACCCAGCCACCCAAACTCCTCAAGCAAGGATGCGATCACACCATGAC ATTCTCACAACATCAAATCGCTTGTTTACTGGCCAACGCCTTCTTTTGCA CTTTCCCGCGTCGCAATTCATTGAAGAGTTCCGAATATTGTAACTATCCG GATATCAATTTCAGCCGGGTATTTCGTGGTATCCATGACGTTGTCAACGA AGTGAAAACTGAAAAACTGAAATGTATTTTGAATTATTTCCGTCGTGTTT TACTTGATATGCCGACAGGTACGGTAACTTTTCACCGGAAAGTTCTTAAC GAGAGCGATTTCCCAGACTGGGAGAACTCGGGCGTTGAATTCGGTGATCT GTATGTAACAAGTGATGGATCCATTGAAGTTGAAGGTGAAGGCTTTTTAC AGGTTGATTTTGCGAATCGAATGATTGGAGGAGGCGTTGTTGGGAACGGT TGTGTTCAAGAAGAAATCCGATTTTTGTTATGTCCGGAAATGATTGTTGC CCGGCTTTTTACGGAAAAGCTTAATGCCAATGAGAGCTTGTTGATTATCG GCGCTGAAAGGTATAACTCTTATTCAGGATACGCGTCCACGTTCAAATTT ACGggaaatttcaatgattttacgGCACGAGACCGTTGGGGTAGACGGTA CTGTGAAATGGTCGCAATAGACGCACATGTTTTTCACTGTTACAAGGATC AGTTCAAAGGACCTAGTTTAAAACGTGAACTTGTGAAAGCGTACTGTGGC TTCCGTCAAAAAGCACAACAAGCTAAAATAGCAGTCGCCACTGGTAATTG GGGTTGCGGTGCTTTTGGAGGGGACGTGTACTTAAAATCGTTGCTACAAC TGATCGCAGCGTCGCAGTCTGGTCGAGATATTGTTTATTTCACATTTCGT GACGAAGGACTTGTCGAAAAATTACGAAACATGCATGAGTACTTACGTAA AAATAAAGTAACCATCGGCAAATTATGGTCGTATTTAGTTAAATACGGGA ACATATTGAAATCGAATACGGAACATGTTCCGTTGTACCCTTATTTGAAA GACTTGCATGAAAAGTATGAGGCAATAACAGACGATGATGCTAGCTCATG TAATGAGGATAACCCACTTGAAATACGAGGTGTTCCGTGTGAAATACCAT CCGATATGTCGCCTCTTTCACCTGATTATGCCGGTGATACACCGTGAGTG AAGATTGGTGTGATGATTTACTTTTATAAAGGGTATTTATGTCAACAAAA ACATGTAAAAGACATTTTTGTTTGTAAGTTAGTGTAATGTATATTATATT TGTATTGTTTAATTGACGAATCGTTTGAAAACCTTCTTTTTCCTCCAGAT AATTTGAGAGAAtgattcattttcaaatttcaatttcatttgcTAATATA AATTTCACTAAGCGTCCTAAGTTAAAGGAGCACAAGAGTATCCAGGCCTA TCGCTCTATTAAACCCCTCATCCTGTATTGAGCAATTATCTGAAGGTTCC TAGTCAATTTCTActgaaagtatttttttattttatacttttCTTCGAcc ctttttttagttttgttgtATATTATAGGTGACTAAAGCTATGAATGGTT TCTAATAGAAAACCTTATTAAACTGTCCTGCTttccatgtttcaaaaaat gaaaaatgctaTGTTTTCCAAGTATATACAACATTATATATTTTGCTAAC AAATCTACTACGAGGTTACAAGATTTTTGGCTACATATAAATgagaatta aaggttttgtttttaaataagagtgatctcgtttgcttactcatcaattt taattcacaagctttttcgcattggattgacacggatgtagAGCCAAAAC TGGCCAGAAAGTggggaaaaaacattttttgcttatatcagcataaaata acaaaaggcagacactgATATGAAATNagggaaaaaaacattttttgctt atatcagcataaaataacaaaaagcatgcactgatatgaaatatgtgtct gatatgaaacgggaacacttatgtcaaaacaaaacctttaagtaccttcg tattttatatatttttacctTTCACGAAATTTAATTCTTAAAATAAACTG ACAGTAATTGAAGGCAGAAAAATATGCCCGATATATAAGAAAATGTTATA ACACTCTTACAATATAAATTGATTTTGCTAATCTCTATGATCTTATATAA AAGATACGAAAATAATCCAAGTCTTAGCACAACAAAGGTTAAcaagtaga aaattttgttgaaaatggcCAGTTTAGTTTTCCTCATTTTAGCTTCTTTT AGCAGATTACCAAATCGTAAGAATTGGTTTGTAAACTCGATTATCCAAAT CAGAGTTATAGCTTCTAGAGTTCCAGATTCACAGTAGAGACAACAGAATA ATGAGCTTAGCGAGACCAAATTCAGGAACATGGTTGCTGCGTTTTGCTTA GTGTTTCGTTGGAAGAAGTAAGATAGAATTTGGAACAAATTGTAAGATGT TTGGAAATAGATGATAGTTTTCTCGCTAACTTGGTCGATAGTACTGATTG TTGTTGATTTCGTTTCGTTGCCAATTTGGTTCAAAGGGATTTCACCGGAT TCGTAAGCAAGGTATTCGATTAATCTACACACTGTGAAACTCTGCATATA ATTGATGAGCTTATGCGTAAATTTAGACTGGATGCCAAAAAGCCAGATTA GACTTCCAAGTATGATTTTGAGCGCAACCCAACATAAAACGCCAAATGAT AAGACTTGTGATAACTCAACCAGTTTTTCATCGTAAAGGAATTTACGTGT CGAGTTTTTGATAAGTTTAAACTGATCAGGCTTGATCAAATCACGTgcgt aaatttccaaaaaattaccAATTTCCATAACGGCTGTAAATAAGATTGAC TTTCGCTGTCTTTacaccaaaaaaataattttaaaactaaCTAGGTCAAA TTTGTATGTACGCTTTATAGTTGTTATTTTTAACTGATGGATTAAAAcct ttctgttttttttagtCGAGAAAGCCTCTATTGAAATTTAGTGGTTTTTG GAGGCTGGTAACTAGCAGTCATTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067630TCONS_00067630Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067630-proteinTCONS_00067630-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_472supercontigscaffold_472:14675..21649 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
51.93 49.72 17.43 12.43 15.24 13.09 12.08 14.75 7.07 9.38 6.47 6.06 3.85 4.02 4.81 5.91 11.69 7.76 3.51 3.92 11.31 11.6 34.06 30.52 9.42 11.6 4.79 4.24 19.6 22.96