|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067483 ID=TCONS_00067483|Name=TCONS_00067483|organism=Clytia hemisphaerica|type=transcript|length=457bp
TGTGGGAAATTACATTCGATGTCAAATTGATATCGAAACAACCGCTACCA
TGTCCAATTTCTCAGATATCATCAATGTTCATTACCCATCAGTTTTAAAC
CAACCGACATCAAACTTcacaaattatttcattggtGATCCAATTCAAGT
TGGTGGTTGCGCATTTAAGTCCATGTTTCATCAAGGTGTCCAAGGTTACT
GGTTAAAAAATGGTGCCGTGTACACTGAAAACGTAACCTTGGTGTACGAG
ATAGCAACAGATGGACTCCTAGTGTTGAAACTACTTGACCTTATCATTGA
CGAGGCATCTGAAAGTGCTAATTATTCTTGCCAACTTGATGTTATAGTCA
ACGGGGATGGTGGTATCAGAACTGCTCGCTCAAATATAGTGCAAACAACT
GTCTTCAGTAACGGAGTACGATTCTTAACAAAACCTACAATCAAGAGAAC
ATCGAAC Run BLAST on NCBI transcript from alignment at scaffold_47:289378..290299- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067483 ID=TCONS_00067483|Name=TCONS_00067483|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at scaffold_47:289378..290299- (Clytia hemisphaerica)
TGTGGGAAATTACATTCGATGTCAAATTGATATCGAAACAACCGCTACCA
TGTCCAATTTCTCAGATATCATCAATGTTCATTGTAAGTGTAGCTCAGTT
TGAGAAGTTTGTTTGATTAGTAATACTAATTCCTATCTTTTTAATAGCAT
CTAAATTTATTATAAAATTGGCTCATGAAAAATGTAGAAATTCACGCGAT
TGACTTCAATGATCCTACCTTTGACAAATATTTAGTTCCACTTTTTTAGT
GATATTGCATCGACAAGTTATTTATTGCTGAATTTCGTATCTCGGCATAA
TAACAGATTTTCAACATTTCAAAAAATCTCTTCCTTTAGACCCATCAGTT
TTAAACCAACCGACATCAAACTTCACAAATTATTTCATTGGTGATCCAAT
TCAAGTTGGTGGTTGCGCATTTAAGTCCATGTTTCATCAAGGTGTCCAAG
GTTACTGGTTAAAAAATGGTGCCGTGTACACTGAAAACGTAACCTTGGTG
TACGAGATAGCAACAGATGGACTCCTAGTGTTGAAACTACTTGACCTTAT
CATTGACGAGGCATCTGAAAGTGCTAATTATTCTTGCCAACTTGATGTTA
TAGTCAACGGGGATGGTGGTATCAGAACTGCTCGCTCAAATATAGTGCAA
ACAACTGTCTTCAGTAAGTCTATCGCTTTCATGGTTTTTTGTAATTTTAA
CATTTTTACGATGCATAGGCTAATCAATTTCAGCCTAACTTCTCCAAATG
TAATCAGATTCTTAATTCAATTAATCTCAGAACCCCTAAATTCTTACATA
TTGGATAATCCTTGTGCCGAACATGCTTGTCAATGAATCTCCAGTTGATT
AATTCACTCTTAAAACATTTAGGTAACGGAGTACGATTCTTAACAAAACC
TACAATCAAGAGAACATCGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067483-exon-scaffold_47-1575043694:290217..290299 | TCONS_00067483-exon-scaffold_47-1575043694:290217..290299 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1575043694:289637..289960 | TCONS_00067483-exon-scaffold_47-1575043694:289637..289960 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1575043694:289378..289427 | TCONS_00067483-exon-scaffold_47-1575043694:289378..289427 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1510915933:290217..290299 | TCONS_00067483-exon-scaffold_47-1510915933:290217..290299 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1510915933:289637..289960 | TCONS_00067483-exon-scaffold_47-1510915933:289637..289960 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1510915933:289378..289427 | TCONS_00067483-exon-scaffold_47-1510915933:289378..289427 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1491911889:290217..290299 | TCONS_00067483-exon-scaffold_47-1491911889:290217..290299 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1491911889:289637..289960 | TCONS_00067483-exon-scaffold_47-1491911889:289637..289960 | Clytia hemisphaerica | exon |
| TCONS_00067483-exon-scaffold_47-1491911889:289378..289427 | TCONS_00067483-exon-scaffold_47-1491911889:289378..289427 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_47 | supercontig | scaffold_47:289378..290299 - |
Blast
The following BLAST results are available for this feature:
|
