|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067184 ID=TCONS_00067184|Name=TCONS_00067184|organism=Clytia hemisphaerica|type=transcript|length=1985bp
ATTCagtgaacaaaataaaagaaattaatgaaaatgaatATAAACACTAA
ATGACTTTCCACAATGACATGGGCACATCATGGGACATTTCATCaacata
tttattttgttgatccTTTTTATAGCGATGGTTCATTGCAAAGGTGACCA
AGAAAACAGATATATTAACAAAGACATTTTGTCACCTTTTCTATTAAACA
AAGTTGAGACAAGACGAAAGAACCGTTTAAGTCATCAACATTATGAAATT
GTAAATACTGATACAAGAAAGAACTCATCACAACTGGTACAACGTTTTAC
AAAGAAATTAACAAATAATACAGTTTACGGTCACAGAATACTTATTTCAA
ATGGGTACAAAGTGTTATCAGTTTTAGAACCTAAAGAAGATGGTGGTTGC
AGTAAACACCAAACTGCTACAGTCTATGAATCATCGAAACAAAGGGAATG
CTTAGTTGCCATTAATGCTGGATTCTTCAATGAAGACACTGGACAATGTT
TTGGTAACATTATCAGTGATGGTGAACTAATCAATCAGTTTAGAGGACTC
AAAAGCGTAAACTTCGGTATCCGTGACGATGGTAGTATAGTGACTGGGTA
TTTGAAAGAAACAGATTTTAAGGAAATGAGGCATCCACTGTTACAACTAG
TTACAGGTGTGGGCTGGATTTTGAGAAGGGGAGAAAATTATTTATCCACT
AGTAAACAACATGAACAATGTAATTTAGATAacttacaaaatttctttga
agtgaGAACAGCAAGGACCTTTTTAGGGCACGACTCAAAAGGCAATGTAC
ATATTGTGCAGGTCGAAGGCAAAACTGGTTTGTATGGGATAAGTCTATAT
GAGTCAGTGGAACTTCTGAAGTCATTTAATTTGGTGAATGTAATTAATTT
GAATGGTGCTGGATCGTCTACACTGGTGATTAACGATACTGTTGTCAATT
ATCCTGGTAACACTTgTTACAACGATGAAGGCCGATCAAATCTATGCGAT
ACGAAAGTCAGTACTATCCTCTGTGTACACAAACCAGATTCCTGTATCCC
TGGACAGTCTTGTTCAGGAAGAGGAACCTGTTTCAAAGGAAAGTGTAAAT
GTCACAATGACTGGTCTGGCAAAGATTGCGAATTCAATGgaaaaatgcTG
GAGAAGTGTTGTTGGCGTAATTATAACATAGTAATCTTCATGAGTGCGTT
GATAGGAGCCAGTGTGGTAATCAACGTTGTCTTATGTGATCTTTTCATGT
TATACCGATTCCGTTCGAAGGATATGACACAACCGAGGAGAAGACCCAAA
GACAGATTGAGGACGTACTTGAAGGAAACTTCAATCATTTCTGATGACGA
ATCTACTGATATTTTAACTTCAGCTGAAAATTTACTGGCTACCACTTCTT
CTCTCTAGATTTTCTTCATTAAAACACTTCTTATTATACTGAGTCTaaat
ggtgataaaagagatttaagtttaaaaaaagaaaacttcattCGGAAAAG
GGGCTCAAGAAGGTTTTACTGTGTTTTTCTCTATATTTTACCTAGGAAAG
TGTCTGATTTTCTCATTATCTAAAGATATTTGGTGTCAGGTGAAAGGACT
CCTTTAATAATCAGGCTAAAGTCAATTCCTTTAGCCATTTTCTTCACTTA
ATTTTGTCGTCTCTGTGATTGTATTCTGCTCTCTGTACTATTCAAATCAG
TGATGACTGACAATGTTAATTAAccagaaatttttaattttaacaacact
atagattttattttttaatttgaacaatttaaaaacaactaccttaaggg
aagaaatttttgcgagtagaaattttcgcggaatttagtCTCGCAAATGA
GCcaggggggtcatgcagttactaTGTGAACACTATGACACTTAGTACGT
TGTGGTTTaacaactaaaaaaaattaaaacagttACTCCAAAGTGGAGTA
AGTGCacattttttcccttttttgaaaaatttccc Run BLAST on NCBI protein sequence of TCONS_00067184-protein >TCONS_00067184-protein ID=TCONS_00067184-protein|Name=TCONS_00067184-protein|organism=Clytia hemisphaerica|type=polypeptide|length=442bp
MGHFINIFILLILFIAMVHCKGDQENRYINKDILSPFLLNKVETRRKNRL
SHQHYEIVNTDTRKNSSQLVQRFTKKLTNNTVYGHRILISNGYKVLSVLE
PKEDGGCSKHQTATVYESSKQRECLVAINAGFFNEDTGQCFGNIISDGEL
INQFRGLKSVNFGIRDDGSIVTGYLKETDFKEMRHPLLQLVTGVGWILRR
GENYLSTSKQHEQCNLDNLQNFFEVRTARTFLGHDSKGNVHIVQVEGKTG
LYGISLYESVELLKSFNLVNVINLNGAGSSTLVINDTVVNYPGNTCYNDE
GRSNLCDTKVSTILCVHKPDSCIPGQSCSGRGTCFKGKCKCHNDWSGKDC
EFNGKMLEKCCWRNYNIVIFMSALIGASVVINVVLCDLFMLYRFRSKDMT
QPRRRPKDRLRTYLKETSIISDDESTDILTSAENLLATTSSL Run BLAST on NCBI transcript from alignment at scaffold_466:206916..211673+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067184 ID=TCONS_00067184|Name=TCONS_00067184|organism=Clytia hemisphaerica|type=transcript|length=4758bp|location=Sequence derived from alignment at scaffold_466:206916..211673+ (Clytia hemisphaerica)
ATTCagtgaacaaaataaaagaaattaatgaaaatgaatATAAACACTAA
ATGACTTTCCACAATGACATGGGCACATCATGGGACATTTCATCaacata
tttattttgttgatccTTTTTATAGCGATGGTTCATTGCAAAGGTGACCA
AGAAAACAGATATATTAACAAAGACATTTTGTCACCTTTTCTATTAAACA
AAGTTGAGACAAGACGAAAGAACCGTTTAAGTCATCAACATTATGAAATT
GTAAATACTGATACAAGAAAGAACTCATCACAACTGGTACAACGTTTTAC
AAAGAAATTAACAAATAATACAGTTTACGGTCACAGAATACTTATTTCAA
ATGGGTACAAAGTGTTATCAGTTTTAGAACCTAAAGAAGATGGTGGTTGC
AGTAAACACCAAACTGCTACAGTCTATGAATCATCGAAACAAAGGGAATG
CTTAGTTGCCATTAATGCTGGATTCTTCAATGAAGACACTGGACAATGTT
TTGGTAACATTATCAGTGATGGTGAACTAATCAATCAGTTTAGAGGACTC
AAAAGCGTAAACTTCGGTATCCGTGACGATGGTAGTATAGTGACTGGGTA
TTTGAAAGAAACAGATTTTAAGGAAATGAGGCATCCACTGTTACAACTAG
TTACAGGTGTGGGCTGGATTTTGAGAAGGGGAGAAAATTATTTATCCACT
AGTAAACAACATGAACAATGTAATTTAGATAacttacaaaatttctttga
agtgaGAACAGCAAGGACCTTTTTAGGGCACGACTCAAAAGGCAATGTAC
ATATTGTGCAGGTCGAAGGCAAAACTGGTTTGTATGGGTAAATATGAAtt
acttttttgaatttattactTGTTTCTAATATAAcatttattaaaaattt
cacAAGTCTCTAATATACATCTTTGACAAGATAATGCTAAAATTCATAAT
TCATAAAATGTAATTTGAAAATGATCCTTTCTTTTTGATATAGCACATAT
CTTTTTGAACTTTTATTTCGAATTCATATgttattactttattttttcca
gGATAAGTCTATATGAGTCAGTGGAACTTCTGAAGTCATTTAATTTGGTG
AATGTAATTAATTTGAATGGTGCTGGATCGTCTACACTGGTGATTAACGA
TACTGTTGTCAATTATCCTGGTAACACTTggtataaaaaaagttataaag
aaTCCTCACTCTAATTAAAAATTCGAATGAAGAATATCTGTCAAATATAT
ACTTTGCTATTTCAAGCAGTAATTGAACCAACTAAGGTTCGACAGagtat
aagaaaaacaaatggaTTTCGTTAATATCTTTATCTAACTTTCTATTTTA
TTGTATGTAAAACTTCAATGAACTTGACCACTGTCCTGCACTATCAcgct
tcaatttttcaatatagTTACAACGATGAAGGCCGATCAAATCTATGCGA
TACGAAAGTCAGTACTATCCTCTGTGTACACAAACCAGATTCCTGTATCC
CTGGACAGTCTTGTTCAGGAAGAGGAACCTGTTTCAAAGGAAAGTGTAAA
TGTCACAATGACTGGTCTGGCAAAGATTGCGAATTCAATGGTAGGTTGGA
AACTAACTGAGATTAcattcaaaaatgagttttacGACTTTTTGGGGTGT
CTCAGGACAATTTTAACCGTGTCTatttttgtagatttatatttttcgaa
aaattaaagtttttgatCATAAATATGATACCAAAGGACTACTTAAAAGG
TAGTCGATTCGGGCAGTatctaaattttaattttgtcaaatttattttca
ggaaaaatgcTGGAGAAGTGTTGTTGGTGAGTATTTAATTGTTCCGAAAA
CTCTCAAAGCTAGAATAAGAATACGTTGCGCTAgtagtgaaaaaagtttg
tttgtgTTGTCAAACTTTACTTACATTAGGCTACTCATTCTCTGCTCTAA
TCTGCTCAACGATCATTTCAGCTCAAGAAAAAATTGTGAGAACTTAGTAC
GTGATATTATGGTGTAAAAGGCCAGATGGGAAATTAATTTATCCCATTAG
CTGGGGGAGGTTTTGTTTNAATACTGATACAAGAAAGAACTCATCACAAC
TGGTACAACGTTTTACAAAGAAATTAACAAATAATACAGTTTACGGTCAC
AGAATACTTATTTCAAATGGGTACAAAGTGTTATCAGTTTTAGAACCTAA
AGAAGATGGTGGTTGCAGTAAACACCAAACTGCTACAGTCTATGAATCAT
CGAAACAAAGGGAATGCTTAGTTGCCATTAATGCTGGATTCTTCAATGAA
GACACTGGACAATGTTTTGGTAACATTATCAGTGATGGTGAACTAATCAA
TCAGTTTAGAGGACTCAAAAGCGTAAACTTCGGTATCCGTGACGATGGTA
GTATAGTGACTGGGTATTTGAAAGAAACAGATTTTAAGGAAATGAGGCAT
CCACTGTTACAACTAGTTACAGGTGTGGGCTGGATTTTGAGAAGGGGAGA
AAATTATTTATCCACTAGTAAACAACATGAACAATGTAATTTAGATAact
tacaaaatttctttgaagtgaGAACAGCAAGGACCTTTTTAGGGCACGAC
TCAAAAGGCAATGTACATATTGTGCAGGTCGAAGGCAAAACTGGTTTGTA
TGGGTAAATATGAAttacttttttgaatttattactTGTTTCTAATATAA
catttattaaaaatttcacAAGTCTCTAATATACATCTTTGACAAGATAA
TGCTAAAATTCATAATTCATAAAATGTAATTTGAAAATGATCCTTTCTTT
TTGATATAGCACATATCTTTTTGAACTTTTATTTCGAATTCATATgttat
tactttattttttccagGATAAGTCTATATGAGTCAGTGGAACTTCTGAA
GTCATTTAATTTGGTGAATGTAATTAATTTGAATGGTGCTGGATCGTCTA
CACTGGTGATTAACGATACTGTTGTCAATTATCCTGGTAACACTTggtat
aaaaaaagttataaagaaTCCTCACTCTAATTAAAAATTCGAATGAAGAA
TATCTGTCAAATATATACTTTCCTATTTCAAGCAGTAATTGAACCAACTA
AGGTTCGACAGagtataagaaaaacaaatggaTTTCGTTAATATCTCTAT
CTAACTTTCTATTTTATTGTATGTAAAACTTCAATGAACTTGACCACTGT
CCTGCACTATCAcgcttcaatttttcaatatagTTACAACGATGAAGGCC
GATCAAATCTATGCGATACGAAAGTCAGTACTATCCTCTGTGTACACAAA
CCAGATTCCTGTATCCCTGGACAGTCTTGTTCAGGAAGAGGAACCTGTTT
CAAAGGAAAGTGTAAATGTCACAATGACTGGTCTGGCAAAGATTGCGAAT
TCAATGGTAGGTTGGAAACTAACTGAGATTAcattcaaaaatgagtttta
cGACTTTTTGGGGTGTCTCAGTACAATTTTAACCGTGTCTatttttgtag
atttatatttttcgaaaaattaaagtttttgatCATAAATATGATACCAA
AGGACTACTTAAAAGGTAGTCGATTCGGGCAGTatctaaattttaatttt
gtcaaatttattttcaggaaaaatgcTGGAGAAGTGTTGTTGGTGAGTAT
TTAATTGTTCCGAAAACTCTCAAAGCTAGAATAAGAATACGTTGCGCTAg
tagtgaaaaaagtttgtttgtgTTGTCAAACTTTACTTACATTAGGCTAC
TCATTCTCTGCTCTAATCTGCTCAACGATCATTTCAGCTCAAGAAAAAAT
TGTGAGAACTTAGTACGTGATATTATGGTGTAAAAGGCCAGATGGGAAAT
TAATTTATCCCATTAGCTGGGGGAGGTTTtgtttgaatattgaatatcct
cattttgatgcttgaaaaATGTTCTCTTTCTTTTTAGGCGTAATTATAAC
ATAGTAATCTTCATGAGTGCGTTGATAGGAGCCAGTGTGGTAATCAACGT
TGTCTTATGTGATCTTTTCATGTTATACCGATTCCGTTCGAAGGATATGA
CACAACCGAGGAGAAGACCCAAAGACAGATTGAGGACGTACTTGAAGGAA
ACTTCAATCATTTCTGATGACGAATCTACTGATATTTTAACTTCAGCTGA
AAATTTACTGGCTACCACTTCTTCTCTCTAGATTTTCTTCATTAAAACAC
TTCTTATTATACTGAGTCTaaatggtgataaaagagatttaagtttaaaa
aaagaaaacttcattCGGAAAAGGGGCTCAAGAAGGTTTTACTGTGTTTT
TCTCTATATTTTACCTAGGAAAGTGTCTGATTTTCTCATTATCTAAAGAT
ATTTGGTGTCAGGTGAAAGGACTCCTTTAATAATCAGGCTAAAGTCAATT
CCTTTAGCCATTTTCTTCACTTAATTTTGTCGTCTCTGTGATTGTATTCT
GCTCTCTGTACTATTCAAATCAGTGATGACTGACAATGTTAATTAAccag
aaatttttaattttaacaacactatagattttattttttaatttgaacaa
tttaaaaacaactaccttaagggaagaaatttttgcgagtagaaattttc
gcggaatttagtCTCGCAAATGAGCcaggggggtcatgcagttactaTGT
GAACACTATGACACTTAGTACGTTGTGGTTTaacaactaaaaaaaattaa
aacagttACTCCAAAGTGGAGTAAGTGCacattttttcccttttttgaaa
aatttccc Coding sequence (CDS) from alignment at scaffold_466:206916..211673+ >TCONS_00067184 ID=TCONS_00067184|Name=TCONS_00067184|organism=Clytia hemisphaerica|type=CDS|length=7974bp|location=Sequence derived from alignment at scaffold_466:206916..211673+ (Clytia hemisphaerica)
ATGGGACATTTCATCaacatatttattttgttgatccTTTTTATAGCGAT
GGTTCATTGCAAAGGTGACCAAGAAAACAGATATATTAACAAAGACATTT
TGTCACCTTTTCTATTAAACAAAGTTGAGACAAGACGAAAGAACCGTTTA
AGTCATCAACATTATGAAATTGTAAATACTGATACAAGAAAGAACTCATC
ACAACTGGTACAACGTTTTACAAAGAAATTAACAAATAATACAGTTTACG
GTCACAGAATACTTATTTCAAATGGGTACAAAGTGTTATCAGTTTTAGAA
CCTAAAGAAGATGGTGGTTGCAGTAAACACCAAACTGCTACAGTCTATGA
ATCATCGAAACAAAGGGAATGCTTAGTTGCCATTAATGCTGGATTCTTCA
ATGAAGACACTGGACAATGTTTTGGTAACATTATCAGTGATGGTGAACTA
ATCAATCAGTTTAGAGGACTCAAAAGCGTAAACTTCGGTATCCGTGACGA
TGGTAGTATAGTGACTGGGTATTTGAAAGAAACAGATTTTAAGGAAATGA
GGCATCCACTGTTACAACTAGTTACAGGTGTGGGCTGGATTTTGAGAAGG
GGAGAAAATTATTTATCCACTAGTAAACAACATGAACAATGTAATTTAGA
TAacttacaaaatttctttgaagtgaGAACAGCAAGGACCTTTTTAGGGC
ACGACTCAAAAGGCAATGTACATATTGTGCAGGTCGAAGGCAAAACTGGT
TTGTATGGGATAAGTCTATATGAGTCAGTGGAACTTCTGAAGTCATTTAA
TTTGGTGAATGTAATTAATTTGAATGGTGCTGGATCGTCTACACTGGTGA
TTAACGATACTGTTGTCAATTATCCTGGTAACACTTgTTACAACGATGAA
GGCCGATCAAATCTATGCGATACGAAAGTCAGTACTATCCTCTGTGTACA
CAAACCAGATTCCTGTATCCCTGGACAGTCTTGTTCAGGAAGAGGAACCT
GTTTCAAAGGAAAGTGTAAATGTCACAATGACTGGTCTGGCAAAGATTGC
GAATTCAATGgaaaaatgcTGGAGAAGTGTTGTTGGCGTAATTATAACAT
AGTAATCTTCATGAGTGCGTTGATAGGAGCCAGTGTGGTAATCAACGTTG
TCTTATGTGATCTTTTCATGTTATACCGATTCCGTTCGAAGGATATGACA
CAACCGAGGAGAAGACCCAAAGACAGATTGAGGACGTACTTGAAGGAAAC
TTCAATCATTTCTGATGACGAATCTACTGATATTTTAACTTCAGCTGAAA
ATTTACTGGCTACCACTTCTTCTCTCTAGATGGGACATTTCATCaacata
tttattttgttgatccTTTTTATAGCGATGGTTCATTGCAAAGGTGACCA
AGAAAACAGATATATTAACAAAGACATTTTGTCACCTTTTCTATTAAACA
AAGTTGAGACAAGACGAAAGAACCGTTTAAGTCATCAACATTATGAAATT
GTAAATACTGATACAAGAAAGAACTCATCACAACTGGTACAACGTTTTAC
AAAGAAATTAACAAATAATACAGTTTACGGTCACAGAATACTTATTTCAA
ATGGGTACAAAGTGTTATCAGTTTTAGAACCTAAAGAAGATGGTGGTTGC
AGTAAACACCAAACTGCTACAGTCTATGAATCATCGAAACAAAGGGAATG
CTTAGTTGCCATTAATGCTGGATTCTTCAATGAAGACACTGGACAATGTT
TTGGTAACATTATCAGTGATGGTGAACTAATCAATCAGTTTAGAGGACTC
AAAAGCGTAAACTTCGGTATCCGTGACGATGGTAGTATAGTGACTGGGTA
TTTGAAAGAAACAGATTTTAAGGAAATGAGGCATCCACTGTTACAACTAG
TTACAGGTGTGGGCTGGATTTTGAGAAGGGGAGAAAATTATTTATCCACT
AGTAAACAACATGAACAATGTAATTTAGATAacttacaaaatttctttga
agtgaGAACAGCAAGGACCTTTTTAGGGCACGACTCAAAAGGCAATGTAC
ATATTGTGCAGGTCGAAGGCAAAACTGGTTTGTATGGGATAAGTCTATAT
GAGTCAGTGGAACTTCTGAAGTCATTTAATTTGGTGAATGTAATTAATTT
GAATGGTGCTGGATCGTCTACACTGGTGATTAACGATACTGTTGTCAATT
ATCCTGGTAACACTTgTTACAACGATGAAGGCCGATCAAATCTATGCGAT
ACGAAAGTCAGTACTATCCTCTGTGTACACAAACCAGATTCCTGTATCCC
TGGACAGTCTTGTTCAGGAAGAGGAACCTGTTTCAAAGGAAAGTGTAAAT
GTCACAATGACTGGTCTGGCAAAGATTGCGAATTCAATGgaaaaatgcTG
GAGAAGTGTTGTTGGCGTAATTATAACATAGTAATCTTCATGAGTGCGTT
GATAGGAGCCAGTGTGGTAATCAACGTTGTCTTATGTGATCTTTTCATGT
TATACCGATTCCGTTCGAAGGATATGACACAACCGAGGAGAAGACCCAAA
GACAGATTGAGGACGTACTTGAAGGAAACTTCAATCATTTCTGATGACGA
ATCTACTGATATTTTAACTTCAGCTGAAAATTTACTGGCTACCACTTCTT
CTCTCTAGATGGGACATTTCATCaacatatttattttgttgatccTTTTT
ATAGCGATGGTTCATTGCAAAGGTGACCAAGAAAACAGATATATTAACAA
AGACATTTTGTCACCTTTTCTATTAAACAAAGTTGAGACAAGACGAAAGA
ACCGTTTAAGTCATCAACATTATGAAATTGTAAATACTGATACAAGAAAG
AACTCATCACAACTGGTACAACGTTTTACAAAGAAATTAACAAATAATAC
AGTTTACGGTCACAGAATACTTATTTCAAATGGGTACAAAGTGTTATCAG
TTTTAGAACCTAAAGAAGATGGTGGTTGCAGTAAACACCAAACTGCTACA
GTCTATGAATCATCGAAACAAAGGGAATGCTTAGTTGCCATTAATGCTGG
ATTCTTCAATGAAGACACTGGACAATGTTTTGGTAACATTATCAGTGATG
GTGAACTAATCAATCAGTTTAGAGGACTCAAAAGCGTAAACTTCGGTATC
CGTGACGATGGTAGTATAGTGACTGGGTATTTGAAAGAAACAGATTTTAA
GGAAATGAGGCATCCACTGTTACAACTAGTTACAGGTGTGGGCTGGATTT
TGAGAAGGGGAGAAAATTATTTATCCACTAGTAAACAACATGAACAATGT
AATTTAGATAacttacaaaatttctttgaagtgaGAACAGCAAGGACCTT
TTTAGGGCACGACTCAAAAGGCAATGTACATATTGTGCAGGTCGAAGGCA
AAACTGGTTTGTATGGGATAAGTCTATATGAGTCAGTGGAACTTCTGAAG
TCATTTAATTTGGTGAATGTAATTAATTTGAATGGTGCTGGATCGTCTAC
ACTGGTGATTAACGATACTGTTGTCAATTATCCTGGTAACACTTgTTACA
ACGATGAAGGCCGATCAAATCTATGCGATACGAAAGTCAGTACTATCCTC
TGTGTACACAAACCAGATTCCTGTATCCCTGGACAGTCTTGTTCAGGAAG
AGGAACCTGTTTCAAAGGAAAGTGTAAATGTCACAATGACTGGTCTGGCA
AAGATTGCGAATTCAATGgaaaaatgcTGGAGAAGTGTTGTTGGCGTAAT
TATAACATAGTAATCTTCATGAGTGCGTTGATAGGAGCCAGTGTGGTAAT
CAACGTTGTCTTATGTGATCTTTTCATGTTATACCGATTCCGTTCGAAGG
ATATGACACAACCGAGGAGAAGACCCAAAGACAGATTGAGGACGTACTTG
AAGGAAACTTCAATCATTTCTGATGACGAATCTACTGATATTTTAACTTC
AGCTGAAAATTTACTGGCTACCACTTCTTCTCTCTAGATGGGACATTTCA
TCaacatatttattttgttgatccTTTTTATAGCGATGGTTCATTGCAAA
GGTGACCAAGAAAACAGATATATTAACAAAGACATTTTGTCACCTTTTCT
ATTAAACAAAGTTGAGACAAGACGAAAGAACCGTTTAAGTCATCAACATT
ATGAAATTGTAAATACTGATACAAGAAAGAACTCATCACAACTGGTACAA
CGTTTTACAAAGAAATTAACAAATAATACAGTTTACGGTCACAGAATACT
TATTTCAAATGGGTACAAAGTGTTATCAGTTTTAGAACCTAAAGAAGATG
GTGGTTGCAGTAAACACCAAACTGCTACAGTCTATGAATCATCGAAACAA
AGGGAATGCTTAGTTGCCATTAATGCTGGATTCTTCAATGAAGACACTGG
ACAATGTTTTGGTAACATTATCAGTGATGGTGAACTAATCAATCAGTTTA
GAGGACTCAAAAGCGTAAACTTCGGTATCCGTGACGATGGTAGTATAGTG
ACTGGGTATTTGAAAGAAACAGATTTTAAGGAAATGAGGCATCCACTGTT
ACAACTAGTTACAGGTGTGGGCTGGATTTTGAGAAGGGGAGAAAATTATT
TATCCACTAGTAAACAACATGAACAATGTAATTTAGATAacttacaaaat
ttctttgaagtgaGAACAGCAAGGACCTTTTTAGGGCACGACTCAAAAGG
CAATGTACATATTGTGCAGGTCGAAGGCAAAACTGGTTTGTATGGGATAA
GTCTATATGAGTCAGTGGAACTTCTGAAGTCATTTAATTTGGTGAATGTA
ATTAATTTGAATGGTGCTGGATCGTCTACACTGGTGATTAACGATACTGT
TGTCAATTATCCTGGTAACACTTgTTACAACGATGAAGGCCGATCAAATC
TATGCGATACGAAAGTCAGTACTATCCTCTGTGTACACAAACCAGATTCC
TGTATCCCTGGACAGTCTTGTTCAGGAAGAGGAACCTGTTTCAAAGGAAA
GTGTAAATGTCACAATGACTGGTCTGGCAAAGATTGCGAATTCAATGgaa
aaatgcTGGAGAAGTGTTGTTGGCGTAATTATAACATAGTAATCTTCATG
AGTGCGTTGATAGGAGCCAGTGTGGTAATCAACGTTGTCTTATGTGATCT
TTTCATGTTATACCGATTCCGTTCGAAGGATATGACACAACCGAGGAGAA
GACCCAAAGACAGATTGAGGACGTACTTGAAGGAAACTTCAATCATTTCT
GATGACGAATCTACTGATATTTTAACTTCAGCTGAAAATTTACTGGCTAC
CACTTCTTCTCTCTAGATGGGACATTTCATCaacatatttattttgttga
tccTTTTTATAGCGATGGTTCATTGCAAAGGTGACCAAGAAAACAGATAT
ATTAACAAAGACATTTTGTCACCTTTTCTATTAAACAAAGTTGAGACAAG
ACGAAAGAACCGTTTAAGTCATCAACATTATGAAATTGTAAATACTGATA
CAAGAAAGAACTCATCACAACTGGTACAACGTTTTACAAAGAAATTAACA
AATAATACAGTTTACGGTCACAGAATACTTATTTCAAATGGGTACAAAGT
GTTATCAGTTTTAGAACCTAAAGAAGATGGTGGTTGCAGTAAACACCAAA
CTGCTACAGTCTATGAATCATCGAAACAAAGGGAATGCTTAGTTGCCATT
AATGCTGGATTCTTCAATGAAGACACTGGACAATGTTTTGGTAACATTAT
CAGTGATGGTGAACTAATCAATCAGTTTAGAGGACTCAAAAGCGTAAACT
TCGGTATCCGTGACGATGGTAGTATAGTGACTGGGTATTTGAAAGAAACA
GATTTTAAGGAAATGAGGCATCCACTGTTACAACTAGTTACAGGTGTGGG
CTGGATTTTGAGAAGGGGAGAAAATTATTTATCCACTAGTAAACAACATG
AACAATGTAATTTAGATAacttacaaaatttctttgaagtgaGAACAGCA
AGGACCTTTTTAGGGCACGACTCAAAAGGCAATGTACATATTGTGCAGGT
CGAAGGCAAAACTGGTTTGTATGGGATAAGTCTATATGAGTCAGTGGAAC
TTCTGAAGTCATTTAATTTGGTGAATGTAATTAATTTGAATGGTGCTGGA
TCGTCTACACTGGTGATTAACGATACTGTTGTCAATTATCCTGGTAACAC
TTgTTACAACGATGAAGGCCGATCAAATCTATGCGATACGAAAGTCAGTA
CTATCCTCTGTGTACACAAACCAGATTCCTGTATCCCTGGACAGTCTTGT
TCAGGAAGAGGAACCTGTTTCAAAGGAAAGTGTAAATGTCACAATGACTG
GTCTGGCAAAGATTGCGAATTCAATGgaaaaatgcTGGAGAAGTGTTGTT
GGCGTAATTATAACATAGTAATCTTCATGAGTGCGTTGATAGGAGCCAGT
GTGGTAATCAACGTTGTCTTATGTGATCTTTTCATGTTATACCGATTCCG
TTCGAAGGATATGACACAACCGAGGAGAAGACCCAAAGACAGATTGAGGA
CGTACTTGAAGGAAACTTCAATCATTTCTGATGACGAATCTACTGATATT
TTAACTTCAGCTGAAAATTTACTGGCTACCACTTCTTCTCTCTAGATGGG
ACATTTCATCaacatatttattttgttgatccTTTTTATAGCGATGGTTC
ATTGCAAAGGTGACCAAGAAAACAGATATATTAACAAAGACATTTTGTCA
CCTTTTCTATTAAACAAAGTTGAGACAAGACGAAAGAACCGTTTAAGTCA
TCAACATTATGAAATTGTAAATACTGATACAAGAAAGAACTCATCACAAC
TGGTACAACGTTTTACAAAGAAATTAACAAATAATACAGTTTACGGTCAC
AGAATACTTATTTCAAATGGGTACAAAGTGTTATCAGTTTTAGAACCTAA
AGAAGATGGTGGTTGCAGTAAACACCAAACTGCTACAGTCTATGAATCAT
CGAAACAAAGGGAATGCTTAGTTGCCATTAATGCTGGATTCTTCAATGAA
GACACTGGACAATGTTTTGGTAACATTATCAGTGATGGTGAACTAATCAA
TCAGTTTAGAGGACTCAAAAGCGTAAACTTCGGTATCCGTGACGATGGTA
GTATAGTGACTGGGTATTTGAAAGAAACAGATTTTAAGGAAATGAGGCAT
CCACTGTTACAACTAGTTACAGGTGTGGGCTGGATTTTGAGAAGGGGAGA
AAATTATTTATCCACTAGTAAACAACATGAACAATGTAATTTAGATAact
tacaaaatttctttgaagtgaGAACAGCAAGGACCTTTTTAGGGCACGAC
TCAAAAGGCAATGTACATATTGTGCAGGTCGAAGGCAAAACTGGTTTGTA
TGGGATAAGTCTATATGAGTCAGTGGAACTTCTGAAGTCATTTAATTTGG
TGAATGTAATTAATTTGAATGGTGCTGGATCGTCTACACTGGTGATTAAC
GATACTGTTGTCAATTATCCTGGTAACACTTgTTACAACGATGAAGGCCG
ATCAAATCTATGCGATACGAAAGTCAGTACTATCCTCTGTGTACACAAAC
CAGATTCCTGTATCCCTGGACAGTCTTGTTCAGGAAGAGGAACCTGTTTC
AAAGGAAAGTGTAAATGTCACAATGACTGGTCTGGCAAAGATTGCGAATT
CAATGgaaaaatgcTGGAGAAGTGTTGTTGGCGTAATTATAACATAGTAA
TCTTCATGAGTGCGTTGATAGGAGCCAGTGTGGTAATCAACGTTGTCTTA
TGTGATCTTTTCATGTTATACCGATTCCGTTCGAAGGATATGACACAACC
GAGGAGAAGACCCAAAGACAGATTGAGGACGTACTTGAAGGAAACTTCAA
TCATTTCTGATGACGAATCTACTGATATTTTAACTTCAGCTGAAAATTTA
CTGGCTACCACTTCTTCTCTCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067184-exon-scaffold_466-1491911889:206916..207752 | TCONS_00067184-exon-scaffold_466-1491911889:206916..207752 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1510915933:206916..207752 | TCONS_00067184-exon-scaffold_466-1510915933:206916..207752 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1575043694:206916..207752 | TCONS_00067184-exon-scaffold_466-1575043694:206916..207752 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1491911889:207967..208095 | TCONS_00067184-exon-scaffold_466-1491911889:207967..208095 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1510915933:207967..208095 | TCONS_00067184-exon-scaffold_466-1510915933:207967..208095 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1575043694:207967..208095 | TCONS_00067184-exon-scaffold_466-1575043694:207967..208095 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1491911889:208333..208346 | TCONS_00067184-exon-scaffold_466-1491911889:208333..208346 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1510915933:208333..208346 | TCONS_00067184-exon-scaffold_466-1510915933:208333..208346 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1575043694:208333..208346 | TCONS_00067184-exon-scaffold_466-1575043694:208333..208346 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1491911889:210163..210321 | TCONS_00067184-exon-scaffold_466-1491911889:210163..210321 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1510915933:210163..210321 | TCONS_00067184-exon-scaffold_466-1510915933:210163..210321 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1575043694:210163..210321 | TCONS_00067184-exon-scaffold_466-1575043694:210163..210321 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1491911889:210533..210557 | TCONS_00067184-exon-scaffold_466-1491911889:210533..210557 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1510915933:210533..210557 | TCONS_00067184-exon-scaffold_466-1510915933:210533..210557 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1575043694:210533..210557 | TCONS_00067184-exon-scaffold_466-1575043694:210533..210557 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1491911889:210853..211673 | TCONS_00067184-exon-scaffold_466-1491911889:210853..211673 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1510915933:210853..211673 | TCONS_00067184-exon-scaffold_466-1510915933:210853..211673 | Clytia hemisphaerica | exon |
| TCONS_00067184-exon-scaffold_466-1575043694:210853..211673 | TCONS_00067184-exon-scaffold_466-1575043694:210853..211673 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:206916..211673 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00067184 vs. Swiss-Prot (Human)
Match: NAGPA (N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGPA PE=1 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 5.225e-61 Identity = 111/287 (38.68%), Postives = 168/287 (58.54%), Query Frame = 2
Query: 287 VQRFTKKLTNNTVYGHRILISNGYKVLSVLEPKEDGGCSKHQTATVYESSKQRECLVAINAGFFNEDTGQCFGNIISDGELINQFRGLKSVNFGIRDDGSIVTGYLKETDFKEMRHPLLQLVTGVGWILRRGENYLSTSKQHEQCN----LDNLQNFFEVRTARTFLGHDSKGNVHIVQVEGKTGLYGISLYESVELLKSFNLVNVINLNGAGSSTLVINDTVVNYPGNTCYNDEGRSNLCDTKVSTILCVHKPDSCIPGQSCSGRGTCFKGKCKCHND-WSGKDCE 1132
V+ F + V GH + SVLEP GGC+ + ATV E+++ +C VA N GFF ++G+C GN++SD ++ GL++ FGIR DG++VTGYL E + + +P +QL++GV W++R G Y++ S Q +C+ + F V +ART +GHD KG + + +G+T GI+L+E E L ++VN INL+G GS+T V+N T+ +YP + C ++ R C +VST++CVH+P C P C G GTC G C+C W G C+
Sbjct: 78 VRTFVSHFRDRAVAGHLTRAVEPLRTFSVLEPGGPGGCAARRRATVEETARAADCRVAQNGGFFRMNSGECLGNVVSDERRVSSSGGLQNAQFGIRRDGTLVTGYLSEEEVLDTENPFVQLLSGVVWLIRNGSIYINES-QATECDETQETGSFSKFVNVISARTAIGHDRKGQLVLFHADGQTEQRGINLWEMAEFLLKQDVVNAINLDGGGSATFVLNGTLASYPSDHCQDNMWR---CPRQVSTVVCVHEP-RCQP-PDCHGHGTCVDGHCQCTGHFWRGPGCD 358
The following BLAST results are available for this feature:
|
