|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066507 ID=TCONS_00066507|Name=TCONS_00066507|organism=Clytia hemisphaerica|type=transcript|length=991bp
CGATTCGGCATGAAACGTGCGTGTTCGAGAAAGAAAGGTTCGATTGAGCT
TCGATAATTTTTTGATCTAAAGGTTATTTACGTTGTATCTGTTGGTATAA
ACTACATTGTTCTCTTATCTAAAGATTTTCCAAGATGTCTGACCAGGAGG
AgcaacataaacataaacaaaccATTATAAATGTTGACTCCGACGAACCT
TTTGCGTATCGATGTAATGTCTGCGAGCTCGATTTTTCCATAATCGAAGA
GTTACTCGCTCATGTTACAGAATCTCACACGAATCCAAATGGCTCTGTCT
CCTGTACAGATTGCCAAGAAACACTTAGTAATGCTGATGagtACATAGAA
CATCACCATAGCCATCATGGAATTAATTTGAAATCCAACTCAGTTGCTTC
TGTGCCACATACTGAAGAGTCACAAACCTTAGTTCTCAGATCAGAATNCC
TATTATAATGTAAATAtaaactttacttttctttttactttaaaGAGTCA
CAAACCTTGGTTACTCAGATCAGAATCACCCACGCAAACTCATCAAAGAC
TCAAGACTATTTTGATCCATGGAGGTACGGTACAAATAATGCTTCGACGC
ACAaTAAAACTATAAATTCTTGAGAAAACGACAATTAGAAATTACCGCTG
GAGAAAATACTTATTGCACCCTTCATAATCGACACTAACATGCCTTCTGC
TAAATGGATGAGAAAAAAACTTCGAGAGACGATCCCGTCCAGTGCTAAAC
AACAATCTTGTAAATGTTTCGAATTATGGAGGACGTATTTCCTTCAGGGT
ACGGACAAAGATCGGTGGAATGATCAGAACGGAGCCATTGAAAAATACCA
AATGTTGATTGAAGATTTGAAATCTACGTTAGAAACAAGTTTTTCTTGTA
CTGGAGAAAATGTGCGcttaaaacaaaatcaaaaggatACCGTAAAAAAC
ATCATTCGTTGTTTAACATATCGTATCGATGCCATAAGGGT Run BLAST on NCBI protein sequence of TCONS_00066507-protein >TCONS_00066507-protein ID=TCONS_00066507-protein|Name=TCONS_00066507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MSDQEEQHKHKQTIINVDSDEPFAYRCNVCELDFSIIEELLAHVTESHTN
PNGSVSCTDCQETLSNADEYIEHHHSHHGINLKSNSVASVPHTEESQTLV
LRSEXLL Run BLAST on NCBI transcript from alignment at scaffold_456:405549..422496+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066507 ID=TCONS_00066507|Name=TCONS_00066507|organism=Clytia hemisphaerica|type=transcript|length=16948bp|location=Sequence derived from alignment at scaffold_456:405549..422496+ (Clytia hemisphaerica)
CGATTCGGCATGAAACGTGCGTGTTCGAGAAAGAAAGGTTCGATTGAGCT
TCGATAATTTTTTGATCTAAAGGTTATTTACGTTGTATCTGTTGGTATAA
ACTACATTGTTCTCTTATCTAAAGATTTTCCAAGATGTCTGACCAGGAGG
AgcaacataaacataaacaaaccATTATAAATGTTGACTCCGACGAACCT
TTTGCGTATCGATGTAATGTCTGCGAGCTCGATTTTTCCATAATCGAAGA
GTTACTCGCTCATGTTACAGAATCTCACACGAATCCAAATGGCTCTGTCT
CCTGTACAGATTGCCAAGAAACACTTAGTAATGCTGATGGTAAGTTGTTT
TCGTTTTTAAATCTCTCATCGCtgattttgaattcatttttaaaactgTC
TTTTCTATTTAGGAGGATGAGCTTTGGGAAACTTTTGTCACAAAAAAGGC
AAGTTTTTGtggttttgtgacatttttcaaaCCAATGAATACAAAAAATT
AGCCTATATCTTTTTAACAGGGTGGGATTGATCTTTCTTGAAGAATTatc
gtaacttggtctaatattgacatccctcatctaattccgacactcttttt
atcagctgaaattaattgaaaactgtttttctttacttaccgtcaactgc
tctaaacttgggacttgttgatatctggcctgtattttcacttactgtta
aatctctttgacaacaaatttgttttgataactccaccaagtttatcaat
catacttcttcgttcctcttagagtgcacagacagttcagacattcgcgt
gtgttccactacagacttttttcatatttcaatttaaaagcctactcggt
gcgaaagagaaattgtgtattttttattaCGCCGtttattaactcaaatc
aaatatgactttggaggttcggtgaaatagaccttttttcaaagaggacg
tcctgttgaataattatgtagtccagccataaaacaatgatagagccatg
cattattactgtatcatgcatattgtaatatgcataattattacaatatg
catgatacagtaataatacatggttttatcattgtttttctgctggatta
cataattattcaacagggtgtggcctcattgaaaaaaaggtctatggtgg
ccgaattaccgtcccatgttttgtcagatagtcccaagtcagttagtcac
actagcgtcccgccaaaatgtgtatcaaagattaatgctgcgaaagcgct
atatcgtttacttgactctcaaggaTAAAAATGTggcgcaaaacttctaa
agggattcatgaaaaaataacccggcgctttttaatgaaattaacatttt
caaaaactttgagaaattgcctaaaaNaccatagatgaaaaaatttgagc
caagccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagat
ctacgggggaggcggaacccacctagatccgcgcaccaccggataggctg
tttcccggaattttgccggacctcaaataaTGACCCATTCACAtatgcgg
aattgtttttactttagcgtataaaccaggccttaaaaaacaaagcgctg
tctcgggaattgaatgacaaattttggttggttgattttggctgctgcac
gttttattttgttccaaactttcaagttttataattgttttgcgaacttg
attcaggtaactctcatccttgttgtgcaaatacatcctgtagatgactg
atgttgttttttctgaaagctaaatttcctagtgtgactaactgcaagtt
agagcagttgacggtattatAGTGGTGGTCGGTCAGAGAGGAatatatac
cgtgaagtcgggtaacttgcatcagtgaaggctaacatgcatagccctca
aatgaatgacctgtctggtccttaaaatacaaagttaaattaaaacaaaa
atgttaaaatagagctgcgagcgaagctgcgtagtttatttgttttgaaa
ttttgctgctttgattggtcctgattggtcagtcatttgagggctataca
tgttagcctccactgatgtaagttactcttaggtgccaaataaacgcccc
ccccTGCTTGTTAATTTTTCAAAAAATTTTCAAACCCCCGGACGTTATTA
GGACCCCCCCCCCCGTTtattaatttttaagaatattttcagctgtcaaa
gagaaggacccttattttgctctaaatagcctgattttagacTATATTTA
CCGTATTTTgggaagtacaatttccaatccccctgcaattaggtcccccc
catttattaaaatctcgaaaattttccaacaccGTTTATTTGAACCCCCC
CATTtatttatttggcacctaagagtaccctTCAACTTCACGGTAATcct
tttcaatcagtgattcaaactttcatattattcctgtctctaaagaaggg
tgtgagaattagacaagggatgtcgatattagaccaattTACGATACATG
ATGGTGTTAGCTCATTCAGTTAGTCAAACGCACTAGGAAATCAAGGTTGA
AGAGATAACAACATCCGTCATCTACAGgatatattttatttgaaacaact
agggtgagagttacctgaatcaagttgaagatcccaagacaattacCGTC
AACTGTTCTAAcctgggacgattggtcgaaacatgggcctgtttgatatc
tggtctttattttcacttactgttaaatctctttgacaacaaatttgttt
tgataactccaagTTTATcatatcaatcatacttcttcagagtgcacaga
cactcgcgtgtgttccactacagatttttttcacatttcgatttaaaagc
ctactcggtgcgaaagagaaattgtgtattttttaatacgctgttcatta
agtcaaatcaactgactttggaggttctgtgaaatggtggccgaattgcc
gtcccatgatttgtcagatagtcccaagttagagcagttgacggtaagta
aaaattgaaagcttgaaacaaaacataatGACCAATTACTAATGTGCTGT
ATgttattcaattcccaagataGCGCCTCCCCTTGATTGCTCactaaact
aaaaataattccgcacatgtaaatgggtccgTGGATGAgctccggcaaaa
tttccgggaagtaCCCTATCCGAAGATGGGATGATGTAGTTAATACACTA
AAGTTTCATTTCCAAACTTTGCTTTAATAATTTTCGCCTGAAATAAAAAT
CTAGgtcatttttaacaaaaatgttACATTGTTAGCAATctttggcaaaa
cctaaaaatcaaatatctttCAACTCTAGTGCTTTTGGACCTGTATTACC
TTTTTAGCACAAAAATCTATTATAGAAGCTATTTCAGAAGCAGCCATCGC
TCcaatttccccaaaatatctgtttccctttttcaaggagagagcttttt
ttgaaaaatggggaaacagatctaaagaccttttccttaaaactatctgt
ttcccggctccagctgatgacgtcatcaggagatgacataataaattggg
aaaccaGGCAGAACCaggggaaacagatatctgttttcaaaaagatgata
ttcattggaaacagattgaactttccgggggtaaaacaGATATCTAGCGC
TGTGATCCTTGTCCTTAGGGCAAGGCCTATGCCCTATGCTTAGGGTAGGC
TCATTCTTCTTCTATCACAAAAAGCAaaggaaacagatgaaaatttccaa
gagagggaaacagatatcctattCATTATAAGTTtgggagaacagatcaa
aattttaattttgaaaattgtggaaacagatcaaGTTTTCCAGGAAGACT
ATTAtgcctgggaaacagatgtttaaaaaaagatcctCACTGCATGATTT
CGCTTTTTTGAAAGTCATAGAGCTTGCcttttttatgaacatgtcccTCA
AGACTGAGGCCTGGAATAAGAGCCATTTTTGGTTATGTAATTTTTAAGCT
CCTAGGTTTTTTCATTTGATTCTCACAGGCCATAACACATGTCTCAAAGT
CTGATGCGTCGGTGCAAACTATTTTGTCGTGGCCATTCTTGCACAGAAAC
CAGACTCATTGGACATAATAGTATACGCAAAACaatgatataaaaatata
aacacaGACATAAATAGAAATTCTACAACAAAGGTTCCTAGCCTCCAGAC
ATAATTAATTGAACCAATCAAACTTTGTTGTCCAattaatgttcgattaa
gttcggtTGTCGAACTTTAATTAAATACtcatatatttttcaaaatataa
agtttgattaattttgattaaagaaatcgaacttaatcgaacttttaaaa
gacctttaaggtatgtgtacaccctTTATGACACATTCTCTtgaagtata
tattttctgaaagcccttAAAATTTCGTAAGGGATGGTGTTAAAATCTTA
TTTAGTATACTGAGTAAGAGTAACAGACCAAATTTTGACCTAGTTACATT
CAAAAGGGATGAATCCACCCATAGCTTTGAGCTATCGAGATTATCAATTG
TCAAAAATGTCCGTGCTCGCTTCGATcgttatttttaatttcgcctagcg
aaagtattacgatagcctttcgcggcggcggcggtgtaataaaaaaatta
gaaaacgaaagtactcgatacggtggacaaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
aagaatcaaatcaataactcttgatagactgtgatataccttttggtaat
taattcttacaaagtaaataagggatggcgcacaatatgatcatatttat
ttttctaataagcatatactttataagaatgaaatTAATAACTCTCGATA
AAAGGTGATATAgtcttcggtaattagttcttacgaaGTAATCAAGGGTT
GGCGCgcaatatgaacatatttacattatcggggaaaacttcgtcgggga
aaaatattcgtcatttGCTGGTAGTTGCTAAACGCCTTAAGGCCGGggta
aattttcgtcggggaaaaatattcgtcatttggccaaaatttcgtcactt
ttccccgacgaagttttccctgataaggtttttttttcaataagaatcaa
attaataactctttatagatggtgatatgcccttcagttattagttctta
agaattaaacaaccattgttcGTAAATTGATCTTATCTTTTTAgcgattt
tgagcctcgttgttcatataaaattgtttcatcaaggctcgatgtaaagt
agacttcagattagcttgatcatctctacttcttgttttttcccatgcag
tttaaactttaggcgaaattttcgacttcaagtcgtcttgttttttaatg
tttactTTTCATAGGCGAAAGGGggtgccaaaatcaaaatcttctaaaat
tgcctccccagtttgcctgaattttagtcgacccacGACGCTACTGCTTT
GATGGATACGTCTATATGATGGTAAACGAGTCTGAAATATGTTAGGGGGA
ATCAAATAATAATAGCCGCATTTTTGggcctaccccggtggaggtcctat
aaataaacctgtgtttgttcgtccgttcgtccgtccgttcgttcgtctgt
taccacttttctcaggattgaatcataggaatcttttgatttttggtata
aaggtgcaaaatggtggtggccaaaatgtgacggagcccgatcttcgaaa
aaaaatttttgggcaaattagggccaaaaaacggctaaaaaacgggtttt
ttgtactttgtgaaaaattggatcattaattttttctgaatttttgcatg
aaattaGGGTACCATCCTAGGTAAAAGATGATTttagcagatttttgcaa
aaaaattttgttggctcaaaaaacgcatgtttatctataagaatcactat
taataagcatacatcaatgttcttattcaaattactcaatttttttatga
gatagatgttttttttgcccacgagggcttacttttgaaaaatatgtgtg
tttaaaCATGCAATTttagttgcttggcgtgtttttatagaaaaactggc
caaattagatattttttataagcacattatcaattacttaggtattagct
tttctcgagattagctctttcattttttatgattttttgcacaaagatgc
ataaactataaacccttgaatgtgtcggagcccgattttcgggaaaacaa
attttggtcaaatttgagccaaaaaacggctaaaaaacaggttttttgga
ctttgtgaaaaattcgatcattaattttttctaattttttgcatgaaagt
agggtaccatcataggtaaaagatggttcaagcagatttttgcaaaaaca
ttttgttggctcaaaaaaacgCANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacgcatgtttatcta
taagaatcactattaataagcatacatcaatgttcttagtcgaattactc
aatttttttatgagatagatgtttttttgctcatgagggctgaATATTTA
GAcacgaaattttggttgcttggcgtgtttttatagaaaaactggctaaa
ttcgatatttttttataagcacattatcaattacttaggtattagctttt
ctcgagattggctctatCATTCTAtatgatttttgcacaaagatgcataa
ttataaaccctcgaatgtgacggaccctgatatttgaaaaaaaatgtttt
tgggtaaatttgggccaaaaaacggctaaaaagggtttttggactttgtg
aaatattggatcattgtttttttctgaatttttgcatgaaagtaagtAAA
AGAtcgctcaagcagatttttgtaaaaaaagaattttttaactcaataaa
cgcatgtttatctataagaatcactattaataaggatacatcaatgttct
tagccaaattactcaattttttgacgagatAGATGTATTtcttgctcacg
aagtcttgaatatgaaagaatatttcaagggcatgaaattttggtttcta
aacgtttttttataagaaacaaacgactaatNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNggtccataaaagtatcacttgtttttcaccgttcaacatataTGGCG
ATGATCAGAGTTCAAAAAAATCACACAATGAATAATGATGATTATCTTGA
CAATTATGATATTTGATCGAAAGTCTTCTACAGACTTTGTAGGAACTTTT
TAAAAGATCTAAAAAATTGTCTTAGGGATTTTGGGAAATTATGGGAAATG
TTTCTCAACTTTGAGCTGTtaaaattaaactttaaaattctctaaacaca
aaaacatgtattttgGTGGTTTTTAGTAATCTGAATCCCTGTATTGGCAT
AGCACCATGAATGGATAATTCACTgataatgttttcttttttcttttaga
gtACATAGAACATCACCATAGCCATCATGGAATTAATTTGAAATCCAACT
CAGTTGCTTCTGTGCCACATACTGAAGGTAAGTGGATGATAATAAGGAAA
TTAAATATGATGTAATTGTGGTTCATGATCAACAAGTCACATGCAAGCTt
taattactctcgggtacctaatagccgcccccccccgctaattaattttt
cgaaaattttccacctaggacattcttattccagcccccctacccccgct
tattaatttttgggaaaatgtttttgaaagttccctcttttgtcctaatt
cagctgtatcagcctccttttcaaaagttttccacctaGGACANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAAAAATGACAA
TCGACAGGACGAGATTTTACAATACTTGAAGCGCGTTGATGATAAACTAG
ATCTCATTATAAAACATTTCAATGTTCCATTCCATCCGTCTTCGCATGAG
AATACAAACTACAATCTACGTAATGGGCGTTCCTCTATCACTTCAAACGG
GCGCCCCTCGATGGCTTCAACCTCACCAGTGGCCAATCATTCTATACCAT
TCCCAAGAATCAATTTCCAAACAACTAAACCTTCCAGTTCTTCACGAAGT
AACTCGTCCTCTTTTTACACAACTTCTGATAATACAACCACCATACATGG
TGAAAATGGACCGCAAGAAATTACTCAATATGTTATCTCAGATGAACTTT
TAGAGTCAACTTTCTTATCGAGTCGGAATCGAGGAAATTTTGCGAAAAAG
CTTGTCTACGCTGCTTTCCCACTTGAAGAACGACTTGGTCGTAATTGTTA
TGGGCGTAAAGGTGGCTCTTTAAGCGGTCCCAAGGAGCCGCTAGAAGTAG
CCAAACTTGATGCAGTCCGGGAAGCTGTGTTCCGAAAGTTTCCTGTTCCG
GCGTCCGAGGAAGATGCTGTTTGGAAGAAAGATTGTGTCATCGCTATTGA
TTCTGCGTTAAGAGCAGAAATACGACAGCGTCTTCAACAAGATGCGAAAT
GTGACGACGGAGATGACAATTTcgttaaatttttaaaacattgatATCCT
ATGATTCACTATTGTACTCGTGCGGTTTTTAATAAGTTTGTTTGTCCCAG
GGAATATGGATGGAAAAGGAGACGCGATTCATTTATTAATATTACTACAA
CTCACACTTAATATTTTTATTGGGTGACTGGTTGATGATTTATATCAGTG
CagtaactccaaacaaaaataGAAACAGTTGTTATTTAGTATCCTTGATA
CATTTGACTTACTTACTTTAGGCGTGTAAACTCTTATGAAGGGgttttta
ctttaaattatGTGCATCGTAAgagtttttcaactttttttataacttCT
GCTCGTAAAGGTTTTCACGTCTaaagaaatgttttaaatttaaaCTATCT
TACTGTAAATATTCCTTTTTTACTCGCATATTCATATTCATgtttctttt
gataaaatttcacCCAATCTTTTGAAATTGATTTAATAATCTGTTATACT
GGTACTGCTATTTTTTGAATTAGTAGATTAGTTCGGGTTATATTAATTTA
ATATTAGAAATTTTCGCGACCAGAAACTTTCGAAAGAAATCAATATGTAT
TGCTGATTATTATATTCtcgcaaagaaaaaaaatctcgcGAATGGCCCAA
CTCGCGAAATGTTCTGGCCGCGAAAATTTCTAACATTAAATTAGCATATA
AGTAAGTAAAAAGCGGGTGTGTAACGTTTTCTGAAATTAACACGCTGGTT
TTACAGTTTCTATCCAAcgttcttgaaaatttttgttttctctcATAATA
AGAAATCGGATTGACGtccataagaacatccaaatttgaagccttcggat
gttcttgactttttgagttttaagcctaaaaatgttcttaacatgttctt
atttacgccattttttttgagtatttttgtcgattttcttaagaaatcag
ttgttttagagtccacgcacgttcttaacattttggccatggaagccttt
atgttctcatatagtttgttcttttaaaaaaacgtgtatttgcgatttat
tattttttcacctTTAGATATGAACTCATAATTTAAACACGAGGTCCTCT
TACTACACCGTAGTGTATCGCTTGTACATTGAGATCAAGGTAAGTCATTT
AGTTTTAACCAGCGCTGCAAATCCTTTTATGAGTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNttagcctgagcagttccttaacaattccttattt
tttggaccattttcagcctcgagttccttataaacgtgttccttataaaa
aaaaaaacgtgtattatgtACTATCGGGTACCTAATACCCgggggtttgg
aaaaaatctcaaaacttgataaaaataaaaatgtcctggctggaaaattt
ttgaaaagaaggctaatacagcagaattaggacaaaagagggaactttca
aaaacattttcccaaaaattaataagggttggaataagaatgtcctgggt
ggaaaattttcaaaaaattaattagcgggagaagggacggctattaagta
cccgagagtaggccAGGCTTGGATAAGTAAGAAACTGTTGATAAACTGTC
ATATAAATCTTTATTGGTTAAGATTCCTGACATGAAAATGTTCGTAAATT
ACTATtcctttgaaatgttttttttttcctatcATAATGTAAATAtaaac
tttacttttctttttactttaaaGAGTCACAAACCTTAGTTCTCAGATCA
GAATNCCTATTATAATGTAAATAtaaactttacttttctttttactttaa
aGAGTCACAAACCTTGGTTACTCAGATCAGAATCACCCACGCAAACTCAT
CAAAGACTCAAGACTATTTTGATCCATGGAGGTACGGTACAAATAATGCT
TCGACGCACAGTATGAAATCTTTTTTAAGAACCAATTTACTTTTGTTGAG
GCCCAgctgttcttctttttttgacacTTTAAACCTCTATTTGTTCTTAT
CCTTTTTTCATTTCTTAGGTAAAATGGGGTTATTTTTATAGGCTTTAAAC
TCGACAATCTTTGCTTTGGCCCTCAATTTACTTGAAAGTCAGCAATTCTA
GGATCAGTactattcttaaattgttctattttttgacgattttgagcCTC
TATGAAATTACTAGCCGGCCCGGCGTCGTTCGAGACGACTCTTTACCATG
ATAATTAAGCTTGCTTCGCTCGCTGCTATTTTTGAGACATTAAAGGGGGT
CCGCATCGaatgtattttttacttttatgagAAATAGGTAACTGTTTCtt
gtattttctaaggaaaaggAACAAAAATACTTTCTTTATTTAAAACATTC
TaatgtatttcccaaggaaataAATGTAGAGAAAATTTCTTACATATTTG
AGGGAAAATTaactaaaaacaaatttgttatattttcaaGAAAGGAATCA
AAGGAAAATcacccaaaataattttcttgaatttggcAAGGAAAAAATCC
TAAAGCAAATTCTTGTACTTTCTAAGGAAAATCGGCCAATACAATTAGac
aatttttatataataattacTGAAGTAATTTTTTCGCTACTTTTACCaag
ttgatttttcaagaaaaatcgcTCTCTGTCTCGAAAAAAGATAAAGAATA
ACTATTTTGAAAGCTcattgaatagaccttttcataaattacgtcacgaa
catcacttacctcgttttgaagttattgccatggtgattaactcccagcg
gattctattaaaactactttctattcataaataaatcatttaatgtctca
tgggacataatcaccatggtaactgtttgaatacgaggcaagtgatgttc
gtgacgtaatttatgaaaaggcctatcgAAACTACCATTTTTAATCTATT
TACAAGGAAAGAAATTTGATCGCAAACTAAGAACAAGCTCGGAACAATCT
CAGTGTAACAGATGGCATAATTGCATTGTCTGTAGATCCTTTAAGTAAAT
AAAGAATACGTATAACAACATGATAAGAACGTTGGAAGTCTAAAAGTTTC
AAttgcacgcttttttttataagaatggtgtaaatccatttcataaTAGA
tagtcttaacttttttgggaaaataatcctaaaatattcttacaacattc
ttaggttaggatcctaattgacaatttataatttaaaatggtctaaaaat
ggcTTTCTTAGCTTAAGTAGCAAAATTCtatatgatggtgatattcttag
catattcttaattttttggccaatttcatcatgcacattcttataaagtg
tattcttataaataaaaaaagcgtgtaaaagtcgacaagaaaccaaaatt
taaaattgcatGGTTCTAACAAAAAAGCGTGTGTTTGCATTGGAATTCAC
ACTTGGAATTCATTTAGTAAAACGATATACAAAACCTACGCTTGGTTGAC
AGTTTATTACTACTGTTTCATTTCAATTCTTATTGATAGAGAAAACGGTC
ACCATAGTTACTCAATacgaataaaaaaacaacacattttaaataaatta
tcatagtgaaataatttttattgaaTTCCCTAATGGGTCGAGAAAACCAT
TTTGAACTGTAGCGCTGTGTTTGAGGTTACCCCTAGTAACCAATAAACAT
TATCACATATATTTATTTTCCTATGATTGTGATGAGACCTTTCAAGGNGT
AAATATTAtcacatttatttattttcctaTGATTGTGATGAGACCTTTCA
AGGAAAAAATCAGTATATAGAACATTGTCTATAACTAGTTTCAGGAGCGG
CTGACGCAGACAgtaaaataaagagaaaaattcatctTTGGCGCaaggtt
tttaatatttttcaaaaaaatactttcGCTACCCACTCCATTAGCTTTTC
TCTTAGATTTTTGGAGAGTTTATTTTTGTGTGTGGTGAATATCTCTAGAT
GAAATGTTACGTTTCAATAGGCTATATTGATGTGATTTATTCCGGTGGAT
GATTGGCTGAATGCCCTGTGGTTTTTTActgtttgttttgatgaattttg
TCGGTACTTTTACTTAggaataaaataatttataaacaTTGTTTTTGGGA
CAACAAACTAATGTAAATTGGGATTTGCGAGTCGGTTATTGGTTGAGTTT
CTCTTCAGGTACGGTTGAGCAatcatgaaattaaaatgataaACTTCATT
ATAGGAGGAGAAAATCGAAATATCTTTTCTGTTAAGTTTTTCTATCGTGG
CTTGAGTTTGCACACCGGATATGGTTTTATACTTTGTATTATGCTTTCGG
TGCGACACATTTTATGACGGTTTTATCCAAGGTTGCTATGCTGTATGTAT
ATTTGTTCGTTCGTGTTCTTTGATGAACTGTGCGACTTcctaaaactttt
gttttgatttctcaTTTTGTTGTTGTAGCTTTTGGCTGGTTATAAAGTGT
CTGCTTACAGAGAAATCAAGATGGTACATGTTCATTTTGCGTTCCCAAAG
TGCATCATTTTTCGTTTATGAATGTTAATCCAATTTGAGTGAGATGATTG
TATTTTcaagtattatttttttattactttttagaTAAAACTATAAATTC
TTGAGAAAACGACAATTAGAAATTACCGCTGGAGAAAATACTTATTGCAC
CCTTCATAATCGACACTAACATGCCTTCTGCTAAATGGATGAGAAAAAAA
CTTCGAGAGACGATCCCGTCCAGTGCTAAACAACAATCTTGTAAATGTTT
CGAATTATGGAGGACGTATTTCCTTCAGGGTACGGACAAAGATCGGTGGA
ATGATCAGAACGGAGCCATTGAAAAATACCAAATGTAAGCCATGCATATC
TCTGTTTATTCTATTTCAATCTTTGCTACCTTCCTACAGTAAgactttac
acgtttttttattagagcaTCAAacgtttttgaagcctttcggatgttct
taacttttctagttttatgcctaaaaatgtttttaacatgttcttatttt
caccattttatgagtatttttatccattttcctaagaaatcgggtgtatg
ttttagagtccgcaaagccttaaaatgttctgaacttgttcttaatattt
tggccatcgaagccttagttcttatatagtttgttcttataaaaaaatgt
gtaccccTTCAGAGCAGGGAACATTTGGACTCGCAATTTTCTTTAACTAA
ATTGTAACTTTTAACTTTAGCTAATTATATTTTCATCAGGTTGATTGAAG
ATTTGAAATCTACGTTAGAAACAAGTTTTTCTTGTACTGGAGAAAATGTG
CGcttaaaacaaaatcaaaaggtaactttcttgattttttgaagaacGAC
AATTTTTATCGATTCGAGGCTCTCCGGCCCTCCCCAGTCTTTTAGAATGC
ACAACgataattatttaaaaatcgTCTTCCAAAATATCCTaatcaatttt
tcagtttttaacaattgctgatttttttatttattttttcaggatACCGT
AAAAAACATCATTCGTTGTTTAACATATCGTATCGATGCCATAAGGGT Coding sequence (CDS) from alignment at scaffold_456:405549..422496+ >TCONS_00066507 ID=TCONS_00066507|Name=TCONS_00066507|organism=Clytia hemisphaerica|type=CDS|length=972bp|location=Sequence derived from alignment at scaffold_456:405549..422496+ (Clytia hemisphaerica)
ATGTCTGACCAGGAGGAgcaacataaacataaacaaaccATTATAAATGT
TGACTCCGACGAACCTTTTGCGTATCGATGTAATGTCTGCGAGCTCGATT
TTTCCATAATCGAAGAGTTACTCGCTCATGTTACAGAATCTCACACGAAT
CCAAATGGCTCTGTCTCCTGTACAGATTGCCAAGAAACACTTAGTAATGC
TGATGagtACATAGAACATCACCATAGCCATCATGGAATTAATTTGAAAT
CCAACTCAGTTGCTTCTGTGCCACATACTGAAGAGTCACAAACCTTAGTT
CTCAGATCAGAATNCCTATTATAAATGTCTGACCAGGAGGAgcaacataa
acataaacaaaccATTATAAATGTTGACTCCGACGAACCTTTTGCGTATC
GATGTAATGTCTGCGAGCTCGATTTTTCCATAATCGAAGAGTTACTCGCT
CATGTTACAGAATCTCACACGAATCCAAATGGCTCTGTCTCCTGTACAGA
TTGCCAAGAAACACTTAGTAATGCTGATGagtACATAGAACATCACCATA
GCCATCATGGAATTAATTTGAAATCCAACTCAGTTGCTTCTGTGCCACAT
ACTGAAGAGTCACAAACCTTAGTTCTCAGATCAGAATNCCTATTATAAAT
GTCTGACCAGGAGGAgcaacataaacataaacaaaccATTATAAATGTTG
ACTCCGACGAACCTTTTGCGTATCGATGTAATGTCTGCGAGCTCGATTTT
TCCATAATCGAAGAGTTACTCGCTCATGTTACAGAATCTCACACGAATCC
AAATGGCTCTGTCTCCTGTACAGATTGCCAAGAAACACTTAGTAATGCTG
ATGagtACATAGAACATCACCATAGCCATCATGGAATTAATTTGAAATCC
AACTCAGTTGCTTCTGTGCCACATACTGAAGAGTCACAAACCTTAGTTCT
CAGATCAGAATNCCTATTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066507-exon-scaffold_456-1491911889:405549..405887 | TCONS_00066507-exon-scaffold_456-1491911889:405549..405887 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1510915933:405549..405887 | TCONS_00066507-exon-scaffold_456-1510915933:405549..405887 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1575043694:405549..405887 | TCONS_00066507-exon-scaffold_456-1575043694:405549..405887 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1491911889:414898..414975 | TCONS_00066507-exon-scaffold_456-1491911889:414898..414975 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1510915933:414898..414975 | TCONS_00066507-exon-scaffold_456-1510915933:414898..414975 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1575043694:414898..414975 | TCONS_00066507-exon-scaffold_456-1575043694:414898..414975 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1491911889:418673..418858 | TCONS_00066507-exon-scaffold_456-1491911889:418673..418858 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1510915933:418673..418858 | TCONS_00066507-exon-scaffold_456-1510915933:418673..418858 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1575043694:418673..418858 | TCONS_00066507-exon-scaffold_456-1575043694:418673..418858 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1491911889:421533..421782 | TCONS_00066507-exon-scaffold_456-1491911889:421533..421782 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1510915933:421533..421782 | TCONS_00066507-exon-scaffold_456-1510915933:421533..421782 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1575043694:421533..421782 | TCONS_00066507-exon-scaffold_456-1575043694:421533..421782 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1491911889:422188..422269 | TCONS_00066507-exon-scaffold_456-1491911889:422188..422269 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1510915933:422188..422269 | TCONS_00066507-exon-scaffold_456-1510915933:422188..422269 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1575043694:422188..422269 | TCONS_00066507-exon-scaffold_456-1575043694:422188..422269 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1491911889:422441..422496 | TCONS_00066507-exon-scaffold_456-1491911889:422441..422496 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1510915933:422441..422496 | TCONS_00066507-exon-scaffold_456-1510915933:422441..422496 | Clytia hemisphaerica | exon |
| TCONS_00066507-exon-scaffold_456-1575043694:422441..422496 | TCONS_00066507-exon-scaffold_456-1575043694:422441..422496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_456 | supercontig | scaffold_456:405549..422496 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
The following BLAST results are available for this feature:
|
