TCONS_00066507-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066507-protein
Unique NameTCONS_00066507-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066507-protein ID=TCONS_00066507-protein|Name=TCONS_00066507-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
MSDQEEQHKHKQTIINVDSDEPFAYRCNVCELDFSIIEELLAHVTESHTN
PNGSVSCTDCQETLSNADEYIEHHHSHHGINLKSNSVASVPHTEESQTLV
LRSEXLL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041611XLOC_041611Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066507TCONS_00066507Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 25..48
e-value: 0.79
score: 18.8
coord: 55..77
e-value: 3.8
score: 16.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 27..48
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 57..78
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 25..53
score: 9.245
NoneNo IPR availableGENE3D3.30.160.60coord: 19..95
e-value: 4.0E-7
score: 29.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066507-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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