TCONS_00066210 (transcript) - C. hemisphaerica

Overview
NameTCONS_00066210
Unique NameTCONS_00066210
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1904

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00066210 ID=TCONS_00066210|Name=TCONS_00066210|organism=Clytia hemisphaerica|type=transcript|length=1904bp
ttcttagtgaaaaataaaacttataacttacaaaaatacaataacaAAAA
GCAATCATGGTATCGTCGGCTGGTGGATTTgctaatttgaaattaaagaa
aGCGTTGAAGCAAACGACTTTGGACACATTGGGCATCCTTGGTTTTGATC
AACCAACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAA
GATGTTGTAGCCGAAGCTGTTACCGGGAGTGGAAAAACACTGGCTTTCCT
TATTCCAGTGATCGGGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAAC
ACGACATCGGAGCTCTCATTCTATCCCCTACGCGAGAACTTGCTATCCAA
ATCAACAACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTCACCAGTAA
CTTGATTGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACG
AAGAAGGAGGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATG
GTGAAAGATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTT
GGAAATTTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACT
TTCGTGAAGACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGC
ACTAGCCTCTTTTCCGCTACACAAACTACAGAAATCGAATCGTTCATTCG
TGCTGGGCTTCGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAACGTGCTC
AGAATGTAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTT
TGCGAAGCTGACCTCAAACTCCAACGACTTGTCGCACTACTTCGACAACA
TCGTGACGAAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATT
ATTTCACAAAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCT
ATCCACGGACAGAAAGTGAAGCGAGCTGAAGTATtcaataaatttcaaga
taTAAAACATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTG
ACATACCAACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTA
GAGGCGTTTGTCCATCGGTGTGGGCGGACTGCCCGTATGGGAAATATAGG
TAAAGCTTTGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTG
TTAAAATCAATCAGAAAGTTCAAATCGATGAATATGAGGGACAGAATATC
ATTGATGACTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTGCCAA
AGACCGCGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCC
AAAGTTATATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTA
GATATTTGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAAT
GCCAGAGCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGATGGATGTTG
ATACGACACTGATTAAGTATCAGGATAAGGCGAGAGAGAAAGCCCGTCTC
GAGAGGGTTGAAAAGGAGATGGAAGCTGCAAAGGAGAAGGCTATCGAGAA
AGCGAAATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCta
gacaaaaagaaaagaagatgaaaaaaaatgaacgGAAAGAGAAACAGACT
TTGAAAAGGAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGA
TGATTTGATGAAAGAAGGACGtttattgaaaaagttgaagaaaggGAAAA
TCACTGAAAAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCT
GATTCTTAGAGActttttagatgaaatttgtttttttttaatagaattTT
AGCT
Run BLAST on NCBI

protein sequence of TCONS_00066210-protein

>TCONS_00066210-protein ID=TCONS_00066210-protein|Name=TCONS_00066210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=600bp
MVSSAGGFANLKLKKALKQTTLDTLGILGFDQPTPVQATCIPLILSNKDV
VAEAVTGSGKTLAFLIPVIGMLQNREEKLKKHDIGALILSPTRELAIQIN
NVLNPFLEKISFTSNLIVGGKSKEDPVKKFNEEGGHIIVATPGKFAKMVK
DTKTGELFQKGLKALEILILDEADRFFQQANFREDLQNILAFVPKQRRTS
LFSATQTTEIESFIRAGLRNPVQVVVREKRAQNVIKRTPDSLSNFYFVCE
ADLKLQRLVALLRQHRDEKFIIFFNTCACVDYFTKLLAILLKNIPILSIH
GQKVKRAEVFNKFQDIKHGILTCTDVMARGIDIPTVDWVIQYDPPSNVEA
FVHRCGRTARMGNIGKALLLLLPSEVAYIDFVKINQKVQIDEYEGQNIID
DSYSMSHKIRKIAAKDREVYEKGLRAFVSFIQSYIKHQCNIVLQMKELDI
CKLGYGFGLLHLPKMPELKEKDLNGFETMDVDTTLIKYQDKAREKARLER
VEKEMEAAKEKAIEKAKFKASQQTRKSDSWSRQKEKKMKKNERKEKQTLK
RKLKDDGDDDVDDVDDLMKEGRLLKKLKKGKITEKQYQERTNEEELLSDS
Run BLAST on NCBI

transcript from alignment at scaffold_451:61093..63990-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00066210 ID=TCONS_00066210|Name=TCONS_00066210|organism=Clytia hemisphaerica|type=transcript|length=2898bp|location=Sequence derived from alignment at scaffold_451:61093..63990- (Clytia hemisphaerica)
TTCTTAGTGAAAAATAAAACTTATAACTTACAAAAATACAATAACAAAAA GCAATCATGGTATCGTCGGCTGGTGGATTTGCTAATTTGAAATTAAAGAA AGCGTTGAAGCAAACGACTTTGGACACATTGGGCATCCTTGGTTTTGATC AACCAACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAA GATGTTGTAGCCGAAGCTGTTACCGGGAGTGGAAAAACACTGGCTTTCCT TATTCCAGGTTCGTTGCAATCATGGTCGATTGAGATAATAATCTATTGAG AATTAAGCTTATGTCCTCGTTTTTCAAAATTTGGAGTTCGGACGCGAAAG TCGATTTTGGGCTATTTCTTAAATTTAATCGGACATTTAAATTTGGCTTG GGTTTATAGACTTCTAGGTTATATATTTTGAGCCTTATTGAACCATCTTT AAACGTTTGGATCCTCAGATCTTCAAGTCTTAAGTCTCATGTTAAGGTTC GTTACCATGTTTTTTTCTTATAAGCAAGTGTACGCCCCTTGGTTAGGCTC GTGTATGCTTCAAAGTTCTTAAAGCATCCAGGCATAGCTTATGCTTATTA TATGATTATGAATCATGCTTATGATTCACCTCGAGCCAATTTTGTAGAGG AATTTCAGAAATCTTTTAAAAATTTGTTCAGATTTTGGGAGCAGTGGAAT ATAGTTACCCCCTTCGAAAAATGAAAAAACACCCCCTAGAAATTAAATTT TTCTTAGATTACCCTCTGGAAATGTTTGTCCATCCCCCCACTCTTTAGAT ATAAAATGTTCGTCCATCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCCCCCCCCCCCACTCTATAGATATAAAATGTAATGGCA TATCAAAGCTCCGAAGACGCAACTCGATGATAAAGTATCTAATTAACCGT TCACCACAATTTATGTGCGTCATTAATTTTAAATATTTATTTTCCTTTCC AGTGATCGGGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACGACA TCGGAGCTCTCATTCTATCCCCTACGCGAGAACTTGCTATCCAAATCAAC AACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTCACCAGTAACTTGAT TGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAGAAG GAGGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTGAAA GATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGAAAT TTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTCGTG AAGACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACTAGC CTCTTTTCCGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGCTGG GCTTCGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAACGTGCTCAGAATG TAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGCGAA GCTGACCTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCGTGA CGAAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATTTCA CAAAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATCCAC GGACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATATAAA ACATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACATAC CAACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAGGCG TTTGTCCATCGGTGTGGGCGGACTGCCCGTATGGGAAATATAGGTAAAGC TTTGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTAAAA TCAATCAGAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATTGAT GACTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTGCCAAAGACCG CGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAAGTT ATATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGATATT TGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCCAGA GCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGATGGATGTTGATACGA CACTGATTAAGTATCAGGATAAGGCGAGAGAGAAAGCCCGTCTCGAGAGG GTTGAAAAGGAGATGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGCGAA ATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGACAAA AAGAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTGAAA AGGAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGATTT GATGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCACTG AAAAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGATTCT TAGAGACTTTTTAGATGAAATTTGTTTTTTTTTAATAGAATTTTAGCT

Coding sequence (CDS) from alignment at scaffold_451:61093..63990-

>TCONS_00066210 ID=TCONS_00066210|Name=TCONS_00066210|organism=Clytia hemisphaerica|type=CDS|length=3606bp|location=Sequence derived from alignment at scaffold_451:61093..63990- (Clytia hemisphaerica)
TGATCGGGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACGACATC
GGAGCTCTCATTCTATCCCCTACGCGAGAACTTGCTATCCAAATCAACAA
CGTTCTTAACCCATTCCTTGAGAAAATCTCTTTCACCAGTAACTTGATTG
TCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAGAAGGA
GGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTGAAAGA
TACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGAAATTT
TAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTCGTGAA
GACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACTAGCCT
CTTTTCCGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGCTGGGC
TTCGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAACGTGCTCAGAATGTA
ATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGCGAAGC
TGACCTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCGTGACG
AAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATTTCACA
AAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATCCACGG
ACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATATAAAAC
ATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACATACCA
ACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAGGCGTT
TGTCCATCGGTGTGGGCGGACTGCCCGTATGGGAAATATAGGTAAAGCTT
TGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTAAAATC
AATCAGAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATTGATGA
CTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTGCCAAAGACCGCG
AAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAAGTTAT
ATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGATATTTG
CAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCCAGAGC
TGAAGGAGAAAGATTTGAATGGTTTTGAAACGATGGATGTTGATACGACA
CTGATTAAGTATCAGGATAAGGCGAGAGAGAAAGCCCGTCTCGAGAGGGT
TGAAAAGGAGATGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGCGAAAT
TCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGACAAAAA
GAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTGAAAAG
GAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGATTTGA
TGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCACTGAA
AAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGATTCTTA
GATGGTATCGTCGGCTGGTGGATTTGCTAATTTGAAATTAAAGAAAGCGT
TGAAGCAAACGACTTTGGACACATTGGGCATCCTTGGTTTTGATCAACCA
ACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGATGT
TGTAGCCGAAGCTGTTACCGGGAGTGGAAAAACACTGGCTTTCCTTATTC
CAGTGATCGGGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACGAC
ATCGGAGCTCTCATTCTATCCCCTACGCGAGAACTTGCTATCCAAATCAA
CAACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTCACCAGTAACTTGA
TTGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAGAA
GGAGGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTGAA
AGATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGAAA
TTTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTCGT
GAAGACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACTAG
CCTCTTTTCCGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGCTG
GGCTTCGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAACGTGCTCAGAAT
GTAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGCGA
AGCTGACCTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCGTG
ACGAAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATTTC
ACAAAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATCCA
CGGACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATATAA
AACATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACATA
CCAACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAGGC
GTTTGTCCATCGGTGTGGGCGGACTGCCCGTATGGGAAATATAGGTAAAG
CTTTGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTAAA
ATCAATCAGAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATTGA
TGACTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTGCCAAAGACC
GCGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAAGT
TATATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGATAT
TTGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCCAG
AGCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGATGGATGTTGATACG
ACACTGATTAAGTATCAGGATAAGGCGAGAGAGAAAGCCCGTCTCGAGAG
GGTTGAAAAGGAGATGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGCGA
AATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGACAA
AAAGAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTGAA
AAGGAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGATT
TGATGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCACT
GAAAAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGATTC
TTAGATGGTATCGTCGGCTGGTGGATTTGCTAATTTGAAATTAAAGAAAG
CGTTGAAGCAAACGACTTTGGACACATTGGGCATCCTTGGTTTTGATCAA
CCAACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGA
TGTTGTAGCCGAAGCTGTTACCGGGAGTGGAAAAACACTGGCTTTCCTTA
TTCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041433XLOC_041433Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066210-proteinTCONS_00066210-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00066210-exon-scaffold_451-1575043694:63733..63990TCONS_00066210-exon-scaffold_451-1575043694:63733..63990Clytia hemisphaericaexon
TCONS_00066210-exon-scaffold_451-1575043694:61093..62738TCONS_00066210-exon-scaffold_451-1575043694:61093..62738Clytia hemisphaericaexon
TCONS_00066210-exon-scaffold_451-1510915933:63733..63990TCONS_00066210-exon-scaffold_451-1510915933:63733..63990Clytia hemisphaericaexon
TCONS_00066210-exon-scaffold_451-1510915933:61093..62738TCONS_00066210-exon-scaffold_451-1510915933:61093..62738Clytia hemisphaericaexon
TCONS_00066210-exon-scaffold_451-1491911889:63733..63990TCONS_00066210-exon-scaffold_451-1491911889:63733..63990Clytia hemisphaericaexon
TCONS_00066210-exon-scaffold_451-1491911889:61093..62738TCONS_00066210-exon-scaffold_451-1491911889:61093..62738Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:61093..63990 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.1842 16.7981 11.257 8.97287 12.4478 9.83645 13.4549 15.7202 8.20167 9.85323 7.63406 6.31473 5.34545 6.8813 7.22621 6.69619 8.02918 7.31167 4.33874 3.21305 5.3426 5.38954 14.9993 15.6875 8.0901 9.88769 2.55433 2.14408 9.40879 10.6038
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR025313DUF4217
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
Blast
BLAST of TCONS_00066210 vs. Swiss-Prot (Human)
Match: DDX55 (ATP-dependent RNA helicase DDX55 OS=Homo sapiens GN=DDX55 PE=1 SV=3)

HSP 1 Score: 507.294 bits (1305), Expect = 6.436e-172
Identity = 244/473 (51.59%), Postives = 339/473 (71.67%), Query Frame = 3
Query:  138 LGFDQPTPVQATCIPLILSNKDVVAEAVTGSGKTLAFLIPVIGMLQNREEKLKKHDIGALILSPTRELAIQINNVLNPFLEKI-SFTSNLIVGGKSKEDPVKKFNEEGGHIIVATPGKFAKMVKDTKTGELFQKGLKALEILILDEADRFFQQANFREDLQNILAFVPKQRRTSLFSATQTTEIESFIRAGLRNPVQVVVREKR-AQNVIKRTPDSLSNFYFVCEADLKLQRLVALLRQHRDEKFIIFFNTCACVDYFTKLLAILLKNIPILSIHGQ-KVKRAEVFNKFQDIKHGILTCTDVMARGIDIPTVDWVIQYDPPSNVEAFVHRCGRTARMGNIGKALLLLLPSEVAYIDFVKINQKVQIDEYEGQNIIDDSYSMSHKIRKIAAKDREVYEKGLRAFVSFIQSYIKHQCNIVLQMKELDICKLGYGFGLLHLPKMPELKEKDLNGFETMDVDTTLIKYQDKAREKAR 1547
            LGF   TPVQ+  IPL + NKDV AEAVTGSGKTLAF+IP++ +L  REEKLKK  +GA+I++PTRELAIQI+ VL+ F +    F+  L +GG++  + V++F ++GG+IIVATPG+   M +    G      +++L++L+LDEADR      F   +  IL F+PKQRRT LFSATQT E+E+ +RAGLRNPV+V V+EK  A +  ++TP  L N+Y VC+AD K  +LV  LR H+ EK ++FF+TCACV+Y+ K L +L+K + I+ IHG+ K KR ++F +F+ ++ GIL CTDVMARGIDIP V+WV+QYDPPSN  AFVHRCGRTAR+G+ G AL+ LLP E +YI+F+ INQK  + E + Q    ++  +  K++ +A  DR V+EKG++AFVS++Q+Y KH+CN++ ++K+LD   L  GF LL +PKMPEL+ K    F  +DV+T  I ++DK REK R
Sbjct:   27 LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG-FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQR---NTADLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNTDTIPFKDKIREKQR 495          
The following BLAST results are available for this feature:
BLAST of TCONS_00066210 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDX556.436e-17251.59ATP-dependent RNA helicase DDX55 OS=Homo sapiens G... [more]
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