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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00066072 ID=TCONS_00066072|Name=TCONS_00066072|organism=Clytia hemisphaerica|type=transcript|length=506bp
ATCAAATTGAAAACTTTAAACCCTAACCAAACCTTGGTTGGAGATGGGGA
TTTCTCAAGACTGAACTTGTATTTACCATACGATACTTTATCATTGATTG
ATGAAATAAGAAGAGAGAGAGCTTCGCGTTTGTGTATCATCACTTACCAT
CCATGTCAATTTATTTCATTACAACAATTGATGAGAACCTTAAAAGAAAT
GGGCGTGGAGGCGGTGTGTAGAGTATACGACCCTTTCAACATACATGGAA
TGTCTTTGACAATGCTACTTAAACATGCTGATGGATGGGATTACACCCGG
TTTCTTCTCCTACTCTCACCCTTTGATCGAGATTTATTCAAAGATTTCCT
CAACAACACTGGCTCTCGTGAGCCTTACAGAATATTTACACCGGATGTCG
CCGCCCTTAATCGAAATTCATTTTACTTGGAAAATAATATGATCCAAGAT
ATTGGAAATGCGCCCAACGACAGTGAAGCAAACTTGTCTTTCCTTTCGGC
TGAATG Run BLAST on NCBI transcript from alignment at scaffold_45:246004..247163+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00066072 ID=TCONS_00066072|Name=TCONS_00066072|organism=Clytia hemisphaerica|type=transcript|length=1160bp|location=Sequence derived from alignment at scaffold_45:246004..247163+ (Clytia hemisphaerica)
ATCAAATTGAAAACTTTAAACCCTAACCAAACCTTGGTAAGTTTAAAAAG
TTTATGAAAATGTTTgtaatgaattttcaaaatattgaatatcttttgaa
aCATTTCCTTTCTTCTTTAGGTTGGAGATGGGGATTTCTCAAGACTGAAC
TTGTATTTACCATACGATACTTTATCATTGATTGATGAAATAAGAAGAGA
GAGAGCTTCGCGTTTGTGTATCATCACTTACCATCCATGTCAATTTATTT
CATTACAACAATTGATGAGAACCTTAAAAGAAATGGGCGTGGAGGCGGTG
TGTAGAGTATACGACCCTTTCAACATACATGGAATGTCTTTGACAATGCT
ACTTAAACATGCTGATGGATGGGATTACACCCGGTTTCTTCTCCTACTCT
CACCCTTTGATCGAGATTTATTCAAAGATTTCCTCAACAACACTGGCTCT
CGTGAGCCTTACAGAATATTTACACCGGATGTCGCCGCCCTTAATCGAAA
TTCATTTTACTTGGAAAATAATATGATCCAAGATATTGGAAATGCGCCCA
ACGACAGTGAAGCAAACTTGTAAGTTATTCAATTAACATAGAAATCAGAT
CATTAAACTATTTAGGGTGTCCTAAAAAGAAGTAATGTGTCAGACCACTT
CTCCTACCATTATGTTAcatatcatttttttcaaacttaagaAAGAACAA
CTTTATCTAATTGATTTAAATAATGATtttatacttttcttttgactaaA
AGTTACAGTCATCTAAAAAGGTCCATAAATGGCGATAAATTGATAAAGAT
GATGTACCATTTTAAAGagtttataacttttgatacagtAGAGATATGAA
AAATCGGAATATATATTTGTAATTATCGAGGTTTAAAGTTTCAGAAAAGT
ACACAATGACATAATTTTATCTTCACCTTTTCCCTCTTCATTTCTCATTT
TCAAGCTTACATCATTCTGCTTAAAGTGTTCTTTCTAACGAGGTATTAAT
TTAAACGATACGGACTGACtgccaatttttttggaatGGGCTTTATATTC
GTTGTGATATTTCGCATGGTTTAAGAAATACTATCAAAGTAAAATACAAT
CTAAAACATAATCAAATTTGTTTTCTCTTTGTATTTTAGGTCTTTCCTTT
CGGCTGAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00066072-exon-scaffold_45-1491911889:246004..246039 | TCONS_00066072-exon-scaffold_45-1491911889:246004..246039 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1510915933:246004..246039 | TCONS_00066072-exon-scaffold_45-1510915933:246004..246039 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1575043694:246004..246039 | TCONS_00066072-exon-scaffold_45-1575043694:246004..246039 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1491911889:246124..246572 | TCONS_00066072-exon-scaffold_45-1491911889:246124..246572 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1510915933:246124..246572 | TCONS_00066072-exon-scaffold_45-1510915933:246124..246572 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1575043694:246124..246572 | TCONS_00066072-exon-scaffold_45-1575043694:246124..246572 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1491911889:247143..247163 | TCONS_00066072-exon-scaffold_45-1491911889:247143..247163 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1510915933:247143..247163 | TCONS_00066072-exon-scaffold_45-1510915933:247143..247163 | Clytia hemisphaerica | exon |
| TCONS_00066072-exon-scaffold_45-1575043694:247143..247163 | TCONS_00066072-exon-scaffold_45-1575043694:247143..247163 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_45 | supercontig | scaffold_45:246004..247163 + |
Blast
The following BLAST results are available for this feature:
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