TCONS_00065201 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065201
Unique NameTCONS_00065201
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2555

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065201 ID=TCONS_00065201|Name=TCONS_00065201|organism=Clytia hemisphaerica|type=transcript|length=2555bp
ATaggatttagaaaaaaaattatagttgACAATAAATAAATTTGGTGTAC
AGTTTTATGAAAACACTGGCATACAAAAGATTGAAGAGAGACCTAGATCC
TACGTTTTTATTGGTTGAAATGTGGAAATTGAGTTGAATCAACATAAAGA
TAGAAGCGAAACCCTTTGAAATGTTTGGAGTTAAAAGTCGTGAGCAATTC
ACGTTAAAATGGCAACTCAAATTCATTGCTATGATTTGTTTTACTGGTTT
actatttttaatgaaaataacaGTTGGCCAGGTTACAAAATCTATGGCTT
TAGTTGCTGATAGTTTTCACATGATTACCGATTTCGCTGCTCTTACTATT
GGTTATATTGCATTAAAATGTGCGAATTCAAAGACTGGCACAAGTCAAGT
GCTTTTAAGTCGTTTTACGTTTGGTTGGGTCCGAGCTGAGGTCCTTGGTG
GTCTTATCAATACAGTTTTTTTACTAGCCCTTTGTTTTTCTGTTATGGTA
CATTCATTAAAACGGTTTATTACACCGGAACACATATCTAAACCGATTCC
AGTTTTGATAGTTGGTGGTGTGAGTTTATTGGTGAATCTTTTGGGCTTAA
TGATGTTTCGTACCACCCGAGAGAATTGTTTGTCCATTTGTAGTAGTTGT
TTTAAGAGCCATGATAAAACACCTGAAGTTGAAGGCATCTCTTTGATGAA
TGGACAACAAACAGCTAAAGCACGTAAACGCACGTATTCACACTCACGTG
GTCACGAAGTGTCATGGGAACACGAATACCAAACACCACATTCGCTAAAC
ATACGCGGTGTATATCTACACATACTTGAACATTTTCTTATCTCCATCAT
TGTTATTATGTCTGCTCTCCTTATGTTACACTACGAAGGAGAAACATGGA
TTGATTATGTAGATCCTGCTTTCACTCTCCTAGTGGTGGCTACCATTTTG
TACTCCACCGTACCGCTTTTTCGTGAAACTTTGATCCTTTTCATGCAATC
GGTACCGGCTAATATACAAGTAAAAGACATGGAAGAGAGACTGTTGAAAC
ACATACCGGAAATTTTGTCCGTTCATGAACTCCATGTGTGGCAACTTGGA
GGTGATAAGGTTGTAGCATCTGCACATCTCCTCTTCAAACGTCCTGAGGA
TTTCCGAAAAACTGTCAACTCCGTTAAATCGTTTTTCCGCCGTGAAGGAA
TCGCTTGTATGACGTTCCAGCCTGAATTTCTACCTGAAGAAGATGTTGAT
GGAGAACAGGCTGCTGACGCCATGGTGATGTTTAGCCCGGACCGATGTTA
CTTCAAATGTGCAAAGAAAGATTGTCAGACATTGACATGCTGTGATGTTT
CAGATGATAAAGATAGCATCACCAATACTGATTCTTCTCCTTCAAGTTCA
GAATGTACTTTTTCACCAGATAGAACTTCATTGACATTACTTATGTCTTA
AATAGACTTCTAGATAACAACGTTGGAATGACTGCTGTAATTGAAACAAT
GTAGTTGCTATGGGGGGAAGTTCAAGTCTTTTTGTTGGAATACAGTCGAA
ACACATAGTGTTGCATCCGTTCCATCAGTAGATTAGAATTCTTACCTTAT
TTTCCAGAATGTGACGAAAAGATTTCCAAGATATAAGAGATAAGGGAGTG
TTATCAATATTTTGCTCAAAGATTGTTAAAGCACCAAAGCCTGGAGTTTA
AAGTATCGAGATATCGACGTGTGTTATTGCTTAAAAAGTGATTTCCAATA
AAATCACATAAATTTATATTCTTCTatattttaatatataaaatccAGTT
AAAATGGATCGGTTTCTCACTGTGTGTAGTTTTGATATCGTGAAGAACAC
CTGATTTACTCAAAAAAACTTACAGATTATCAAATAAACTCTACACCAAA
CTCACAACcagggggtcatgcagttactaTGTAAAAACACTTTACTGGTG
GAACAAATTACTAAATTCACTAGAAATATAAATTTGGGCCAAGTAATTGG
GGAAAAAGGCTCGTAAAGGCTGgtgcattcaaaattttaattgaaaatta
GTTTTACCGTTAGTAACTGCAAAAGGTATTTATAGGGTGGTATAGAATTG
TTAGCTCCAAAAAAGAACTTACTGCTTATAATGCCTTGTAGTAACTACAT
GACCCCCTGAAACTACGTCTTTTTAAAAGAGTATAGTCTACTTTGATTTA
CGTTATCGTGAAATTatagaattatattttttaCGAAAAATTTTTATACT
GCATCGCAATAATTTACCTAGATCTTTGTAGTGACACAGCGAGTTTTAGT
AGAGGTCAACTAAACTTTAATGGGAAAATTGACTCAAAGGGAGACTAGGg
gaactttttctaaaaaagctaaaatattttttgtagatCATTTATTGAGC
TCCTTGAAGTAGTTAATCTTTCAGTATATTATTTTATGATCATTACACTT
TTTCAGACTTTTGAAtgcctttttctttcaaatgcttGAAATTTAGCTGA
AAATATCCTGAGGCTGACATTGTTTTTTAATTGTCTAGAAACACTTTTCT
TTTTC
Run BLAST on NCBI

protein sequence of TCONS_00065201-protein

>TCONS_00065201-protein ID=TCONS_00065201-protein|Name=TCONS_00065201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MFGVKSREQFTLKWQLKFIAMICFTGLLFLMKITVGQVTKSMALVADSFH
MITDFAALTIGYIALKCANSKTGTSQVLLSRFTFGWVRAEVLGGLINTVF
LLALCFSVMVHSLKRFITPEHISKPIPVLIVGGVSLLVNLLGLMMFRTTR
ENCLSICSSCFKSHDKTPEVEGISLMNGQQTAKARKRTYSHSRGHEVSWE
HEYQTPHSLNIRGVYLHILEHFLISIIVIMSALLMLHYEGETWIDYVDPA
FTLLVVATILYSTVPLFRETLILFMQSVPANIQVKDMEERLLKHIPEILS
VHELHVWQLGGDKVVASAHLLFKRPEDFRKTVNSVKSFFRREGIACMTFQ
PEFLPEEDVDGEQAADAMVMFSPDRCYFKCAKKDCQTLTCCDVSDDKDSI
TNTDSSPSSSECTFSPDRTSLTLLMS
Run BLAST on NCBI

transcript from alignment at scaffold_433:236205..243113-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065201 ID=TCONS_00065201|Name=TCONS_00065201|organism=Clytia hemisphaerica|type=transcript|length=6909bp|location=Sequence derived from alignment at scaffold_433:236205..243113- (Clytia hemisphaerica)
ATAGGATTTAGAAAAAAAATTATAGTTGACAATAAATAAATTTGGTGTAC
AGTTTTATGAAAACACTGGCATACAAAAGATTGAAGAGAGACCTAGATCC
TACGTTTTTATTGGTTGAAATGTGGAAATTGAGTTGAATCAACATAAAGA
TAGAAGCGAAACCCTTTGAAATGTTTGGAGTTAAAAGTCGTGAGCAATTC
ACGTTAAAATGGCAACTCAAATTCATTGCTATGATTTGTTTTACTGGTTT
ACTATTTTTAATGAAAATAACAGTTGGCCAGGTTACAAAATCTATGGCTT
TAGTTNGCTATTTTTAATGAAAATAACCGTTGGCCAGGTTACAAAATCTA
TGGCTTTAGTTGCTGATAGTTTTCACATGATTACCGATTTCGCTGCTCTT
ACTATTGGTTATATTGCATTAAAATGTGCGAATTCAAAGACTGGCACAAG
TCAAGTGCTTTTAAGTCGTTTTACGTTTGGTTGGGTCCGAGCTGAGGTCC
TTGGTGGTCTTATCAATACAGTTTTTTTACTAGCCCTTTGTTTTTCTGTT
ATGGTACATTCATTAAAACGGTTTATTACACCGGAACACATATCTAAACC
GATTCCAGTTTTGATAGTTGGTGGTGTGAGTTTATTGGTGAATCTTTTGG
GCTTAATGATGTTTCGTACCACCCGAGAGAATTGTTTGTCCATTTGTAGT
AGTTGTTTTAAGAGCCATGATAAAACACCTGAAGTTGAAGGCATCTCTTT
GATGAATGGACAACAAACAGCTAAAGGTATATATTCTTCTTGATTCAAAA
TTCTAAGAACCAATCAATCAATGAGCCTTGGTAACTCTTTTTTTTTCGTG
ATTCCCAGCATTTTATAATAAGATCTTTTGAGTTTTGAGCATCGTGTTTT
TATGGGGGAAACTGTTCTTACAAGAAGTGTATTACGGCCCAAGCTTTGAT
TTCTCTTCGTGAAAATATAGTATTTGTTGATCTCAGTTCGTAAAAGCGTA
TTTTTATAATTTTTTCATTTTCTTTAATTGCCGAAATAGATTGTTCTAAC
GCGTTCTGTCAAATTCTCACATTTTAAACTTTTTCTGTTAAGGCCGGTCT
CCACTTGCGCGCGCTGCGATCGCATTGGAAAAAAGGTTACGTCATAAAAA
TGTAGTGCGCGCTCGAAAAAAAAGTTGAACACATTTCAACTTTTTTAAAC
CGTTACGTCAAATTGCACCAATGGAATTGTTTCATTTTTCTTTTGACCAA
TAGCGTGGAAGCTTTGCTCGAAAAAGTGCGATCGCAGAGCGCGCCAGTGG
AGACGGGCATTTACACGTGTAACCACGGATGTTTCTTTTGACAACCACGA
ACTATCGCGTTTTATTGATTTCTAGTTTTTTCATTTTCATCTCTTACAGC
ACGTAAACGCACGTATTCACACTCACGTGGTCACGAAGTGTCATGGGAAC
ACGAATACCAAACACCACATTCGCTAAACATACGCGGTGTATATCTACAC
ATACTTGAACATTTTCTTATCTCCATCATTGTTATTATGTCTGCTCTCCT
TATGTTACACTACGAAGGAGAAACATGGATTGATTATGTAGATCCTGCTT
TCACTCTCCTAGTGGTGGCTACCATTTTGTACTCCACCGTACCGCTTTTT
CGTGAAACTTTGATCCTTTTCATGCAATCGGTACCGGCTAATATACAAGT
AAAAGACATGGAAGAGAGACTGTTGAAACACATACCGGAAATTTTGTCCG
TTCATGAACTCCATGTGTGGCAACTTGGAGGTGATAAGGTTGTAGGTAAG
TTTGACATATTTCAGCTGCCTCTTTGTGATACTTCCATCAACCCTTAGCT
GCGCTTTCTGGTTTTAAGGGGACAGGTAGTGAATTTACAAAGAAATGACC
TCTGAATTCTTTTTCTTTGAGAATGTTAATTCAACGACTTTACACATTTT
GATGTCATTCCTCCCTGGTAAACTCGAGCCCAGTCTTCAAAGGTTGATAG
AACGATTTATACGAATCGGTACATTTTGAGAACATTCTGAATTCTTTCAG
TTTTTGAATTTCATTTTCATTTCTCTCCGTTATTCTTCATTTAGGGAATA
GCTAGATTTTTCCTTATATTTTTAGCCTACAGAATAAAAAGCTTTTGAAG
GCTTTGAGCTAAAAAATTTGTACCAAAACACAATACGGTTCTTTCGGAAA
ATGAGTGGCCCGATTGGTATCATATGTATTTCTAGTATTTCAAATCAAAT
ATTAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTGCTCATCA
ATTTTAATTTACAAGCCTTTTCGCATTGGATTGACACGTATGTGAAGCAA
GATTTGTCAGAAAGAGGAAAATGAAAATATTTTTTGCTTATGTCAGCCAG
GGATATGTTATAGCGGAGCTGGATAACGCAAATTTAAAAAAGCCTTGTTC
TATGTCTGTCCCTGACATTAAAATTTGATATGAAATTTAACTTTTATAAT
TACAAACTCGTGAAATTTGGATTTCCTCTTAGCCAATGATTCTGCTGCTG
CATTTATCGTTCACGATTAAAAACTTTTAATTATCAAGAGGGTCTGTAAA
ACATTGGTGAATGACAATTTTAAAAAATGAAAAACATTGTTTTCGTAAAG
TTATAAGAAGTTTCTTCTCTAAGATTATAAATAGTACTTTTTCATTTGAA
ATACCGCGCTACACCGCGGGTTGCCTCTTTCTAACTGATATTTTCAGATA
GCAAGTCGGTATGTCTGATTATGGAAAAAATTTCAAGTCAATTGAAACAA
TATTTGTCAAAATATTTACATCCGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGATGGATTTCTATTATGAACAGTTTACAATA
GAAAAGACAAAGAAGCAATCCGCTAAGGAATTCTCGTCCTTCATCCAGCT
CCGCTATAACATATCCCTGTGTCAGCATAATATAACAAAAGGCATACACT
GTTCTGATATGAAATATGTGCCTCATAACGGGAACACTTTAAAATCTCTA
CTATAATAATACTTGGGAGGTTTTTATCTTCTCTTCGGTGAGTGCTAGAT
AATTTAATAGAGTTGACTAAAATATTATTTCGTACTTAAGAGTTTCATGG
CGCCTCCGCCTCAGAGTGAATCTCTCAATAATAATGCAACACCTTTCTGT
TTCAGCATCTGCACATCTCCTCTTCAAACGTCCTGAGGATTTCCGAAAAA
CTGTCAACTCCGTTAAATCGTTTTTCCGCCGTGAAGGAATCGCTTGTATG
ACGTTCCAGCCTGAATTTCTACCTGAAGAAGATGTTGATGGAGAACAGGC
TGCTGACGCCATGGTGATGTTTAGCCCGGACCGATGTTACTTCAAATGTG
CAAAGAAAGATTGTCAGACATTGACATGCTGTGATGTTTCAGATGATAAA
GATAGCATCACCAATACTGATTCTTCTCCTTCAAGTTCAGAATGTACTTT
TTCACCAGATAGAACTTCATTGACATTACTTATGTCTTAAATAGACTTCT
AGATAACAACGTTGGAATGACTGCTGTAATTGAAACAATGTAGTTGCTAT
GGGGGGAAGTTCAAGTCTTTTTGTTGGAATACAGTCGAAACACATAGTGT
TGCATCCGTTCCATCAGTAGATTAGAATTCTTACCTTATTTTCCAGAATG
TGACGAAAAGATTTCCAAGATATAAGAGATAAGGGAGTGTTATCAATATT
TTGCTCAAAGATTGTTAAAGCACCAAAGCCTGGAGTTTAAAGTATCGAGA
TATCGACGTGTGTTATTGCTTAAAAAGTGATTTCCAATAAAATCACATAA
ATTTATATTCTTCTATATTTTAATATATAAAATCCAGTTAAAATGGATCG
GTTTCTCACTGTGTGTAGTTTTGATATCGTGAAGAACACCTGATTTACTC
AAAAAAACTTACAGATTATCAAATAAACTCTACACCAAACTCACAACCAG
GGGGTCATGCAGTTACTATGTAAAAACACTTTACTGGTGGAACAAATTAC
TAAATTCACTAGAAATATAAATTTGGGCCAAGTAATTGGGGAAAAAGGCT
CGTAAAGGCTGGTGCATTCAAAATTTTAATTGAAAATTAGTTTTACCGTT
AGTAACTGCAAAAGGTATTTATAGGGTGGTATAGAATTGTTAGCTCCAAA
AAAGAACTTACTGCTTATAATGCCTTGTAGTAACTACATGACCCCCTGAA
ACTACGTCTTTTTAAAAGAGTATAGTCTACTTTGATTTACGTTATCGTGA
AATTATAGAATTATATTTTTTACGAAAAATTTTTATACTGCATCGCAATA
ATTTACCTAGATCTTTGTAGTGACACAGCGAGTTTTAGTAGAGGTCAACT
AAACTTTAATGGGAAAATTGACTCAAAGGGAGACTAGGGGAACTTTTTCT
AAAAAAGCTAAAATATTTTTTGTAGATCATTTATTGAGCTCCTTGAAGTA
GTTAATCTTTCAGTATATTATTTTATGATCATTACACTTTTTCAGACTTT
TGAATGCCTTTTTCTTTCAAATGCTTGAAATTTAGCTGAAAATATCCTGA
GGCTGACATCGTTTTTTAATTGTCTAGAAACACTTTTCTTTTTCCAATAA
AAATTGTATTAGAACAAGAATAAGAACAATTTAAGAACAATGCTAAGTCT
TGAATTGCTAAAGTTTAAGCAAATATCAAAGGTCAAGCTAGTAAAAATAA
GGCATTAAACCTAAATAACATCAGTTAAATACCCTAAAATTAAGCAGGGG
GGGTCAGGGTCCAGGATACCAACCCAGGGCCCAAAAACCTGACTTTTCGA
GATTTGAAAGTAGTAGACACCACCACCCCCTAAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATGCAAAAAGTTATATGCATAAGATACTGCATACAAGGGACGCTAA
ACAGAATCTGTGGATGTTTTTATTCAAAGAACATTCCTCTTATGAATCAC
TTATGTACCACACTTTAGACTCCTGAAAGTGAAAACAAGTTTTTCTCATT
CTAACACAACGTAAATTAAGTTTTTTGAACTAAATTGGCAAAATGTATAA
AGTTCATAAAACAAGTTGATAAACTAGACTAGATAAAAATTTCATTGTAT
TAGGCACGCCTAGAGTCTTTGTAACATTATCCTATATGATGAGCGCCCGG
GGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCACT
GCTTACTCCACCCAAATTTATCACGCCTCTCCTAAACTATTCCCTTTTCT
ATTGATCTTGTGTAGACGATAGGATCTTTGTAGTGACACAGCGAGTTTTA
GTAGAGATCACCTAAACTTTTTTAATGGGAAAATTGACTCAAAGGGAAAC
TAGGGGAACTTTTTCTAAAAAAGCTAAAATATTTTTGTAGATCATTTATT
GAGCTCCTTGAAGTAGTTAATTTTTCAGTATATTATTTTATGATACATTA
CACCTTTTCAGACTTTTGAATGCTTTTTCTTTCAAATGCTTGAAATTTAG
CTGAAAATATCCTGAGGCTAACATTGTTTTTTAATTGTCTAGAAACACTT
TTCTTTTTC

Coding sequence (CDS) from alignment at scaffold_433:236205..243113-

>TCONS_00065201 ID=TCONS_00065201|Name=TCONS_00065201|organism=Clytia hemisphaerica|type=CDS|length=5124bp|location=Sequence derived from alignment at scaffold_433:236205..243113- (Clytia hemisphaerica)
CATCTGCACATCTCCTCTTCAAACGTCCTGAGGATTTCCGAAAAACTGTC
AACTCCGTTAAATCGTTTTTCCGCCGTGAAGGAATCGCTTGTATGACGTT
CCAGCCTGAATTTCTACCTGAAGAAGATGTTGATGGAGAACAGGCTGCTG
ACGCCATGGTGATGTTTAGCCCGGACCGATGTTACTTCAAATGTGCAAAG
AAAGATTGTCAGACATTGACATGCTGTGATGTTTCAGATGATAAAGATAG
CATCACCAATACTGATTCTTCTCCTTCAAGTTCAGAATGTACTTTTTCAC
CAGATAGAACTTCATTGACATTACTTATGTCTTAACACGTAAACGCACGT
ATTCACACTCACGTGGTCACGAAGTGTCATGGGAACACGAATACCAAACA
CCACATTCGCTAAACATACGCGGTGTATATCTACACATACTTGAACATTT
TCTTATCTCCATCATTGTTATTATGTCTGCTCTCCTTATGTTACACTACG
AAGGAGAAACATGGATTGATTATGTAGATCCTGCTTTCACTCTCCTAGTG
GTGGCTACCATTTTGTACTCCACCGTACCGCTTTTTCGTGAAACTTTGAT
CCTTTTCATGCAATCGGTACCGGCTAATATACAAGTAAAAGACATGGAAG
AGAGACTGTTGAAACACATACCGGAAATTTTGTCCGTTCATGAACTCCAT
GTGTGGCAACTTGGAGGTGATAAGGTTGTAGGTTACAAAATCTATGGCTT
TAGTTGCTGATAGTTTTCACATGATTACCGATTTCGCTGCTCTTACTATT
GGTTATATTGCATTAAAATGTGCGAATTCAAAGACTGGCACAAGTCAAGT
GCTTTTAAGTCGTTTTACGTTTGGTTGGGTCCGAGCTGAGGTCCTTGGTG
GTCTTATCAATACAGTTTTTTTACTAGCCCTTTGTTTTTCTGTTATGGTA
CATTCATTAAAACGGTTTATTACACCGGAACACATATCTAAACCGATTCC
AGTTTTGATAGTTGGTGGTGTGAGTTTATTGGTGAATCTTTTGGGCTTAA
TGATGTTTCGTACCACCCGAGAGAATTGTTTGTCCATTTGTAGTAGTTGT
TTTAAGAGCCATGATAAAACACCTGAAGTTGAAGGCATCTCTTTGATGAA
TGGACAACAAACAGCTAAAGATGTTTGGAGTTAAAAGTCGTGAGCAATTC
ACGTTAAAATGGCAACTCAAATTCATTGCTATGATTTGTTTTACTGGTTT
ACTATTTTTAATGAAAATAACAGTTGGCCAGCATCTGCACATCTCCTCTT
CAAACGTCCTGAGGATTTCCGAAAAACTGTCAACTCCGTTAAATCGTTTT
TCCGCCGTGAAGGAATCGCTTGTATGACGTTCCAGCCTGAATTTCTACCT
GAAGAAGATGTTGATGGAGAACAGGCTGCTGACGCCATGGTGATGTTTAG
CCCGGACCGATGTTACTTCAAATGTGCAAAGAAAGATTGTCAGACATTGA
CATGCTGTGATGTTTCAGATGATAAAGATAGCATCACCAATACTGATTCT
TCTCCTTCAAGTTCAGAATGTACTTTTTCACCAGATAGAACTTCATTGAC
ATTACTTATGTCTTAACACGTAAACGCACGTATTCACACTCACGTGGTCA
CGAAGTGTCATGGGAACACGAATACCAAACACCACATTCGCTAAACATAC
GCGGTGTATATCTACACATACTTGAACATTTTCTTATCTCCATCATTGTT
ATTATGTCTGCTCTCCTTATGTTACACTACGAAGGAGAAACATGGATTGA
TTATGTAGATCCTGCTTTCACTCTCCTAGTGGTGGCTACCATTTTGTACT
CCACCGTACCGCTTTTTCGTGAAACTTTGATCCTTTTCATGCAATCGGTA
CCGGCTAATATACAAGTAAAAGACATGGAAGAGAGACTGTTGAAACACAT
ACCGGAAATTTTGTCCGTTCATGAACTCCATGTGTGGCAACTTGGAGGTG
ATAAGGTTGTAGGTTACAAAATCTATGGCTTTAGTTGCTGATAGTTTTCA
CATGATTACCGATTTCGCTGCTCTTACTATTGGTTATATTGCATTAAAAT
GTGCGAATTCAAAGACTGGCACAAGTCAAGTGCTTTTAAGTCGTTTTACG
TTTGGTTGGGTCCGAGCTGAGGTCCTTGGTGGTCTTATCAATACAGTTTT
TTTACTAGCCCTTTGTTTTTCTGTTATGGTACATTCATTAAAACGGTTTA
TTACACCGGAACACATATCTAAACCGATTCCAGTTTTGATAGTTGGTGGT
GTGAGTTTATTGGTGAATCTTTTGGGCTTAATGATGTTTCGTACCACCCG
AGAGAATTGTTTGTCCATTTGTAGTAGTTGTTTTAAGAGCCATGATAAAA
CACCTGAAGTTGAAGGCATCTCTTTGATGAATGGACAACAAACAGCTAAA
GATGTTTGGAGTTAAAAGTCGTGAGCAATTCACGTTAAAATGGCAACTCA
AATTCATTGCTATGATTTGTTTTACTGGTTTACTATTTTTAATGAAAATA
ACAGTTGGCCAGCATCTGCACATCTCCTCTTCAAACGTCCTGAGGATTTC
CGAAAAACTGTCAACTCCGTTAAATCGTTTTTCCGCCGTGAAGGAATCGC
TTGTATGACGTTCCAGCCTGAATTTCTACCTGAAGAAGATGTTGATGGAG
AACAGGCTGCTGACGCCATGGTGATGTTTAGCCCGGACCGATGTTACTTC
AAATGTGCAAAGAAAGATTGTCAGACATTGACATGCTGTGATGTTTCAGA
TGATAAAGATAGCATCACCAATACTGATTCTTCTCCTTCAAGTTCAGAAT
GTACTTTTTCACCAGATAGAACTTCATTGACATTACTTATGTCTTAACAC
GTAAACGCACGTATTCACACTCACGTGGTCACGAAGTGTCATGGGAACAC
GAATACCAAACACCACATTCGCTAAACATACGCGGTGTATATCTACACAT
ACTTGAACATTTTCTTATCTCCATCATTGTTATTATGTCTGCTCTCCTTA
TGTTACACTACGAAGGAGAAACATGGATTGATTATGTAGATCCTGCTTTC
ACTCTCCTAGTGGTGGCTACCATTTTGTACTCCACCGTACCGCTTTTTCG
TGAAACTTTGATCCTTTTCATGCAATCGGTACCGGCTAATATACAAGTAA
AAGACATGGAAGAGAGACTGTTGAAACACATACCGGAAATTTTGTCCGTT
CATGAACTCCATGTGTGGCAACTTGGAGGTGATAAGGTTGTAGGTTACAA
AATCTATGGCTTTAGTTGCTGATAGTTTTCACATGATTACCGATTTCGCT
GCTCTTACTATTGGTTATATTGCATTAAAATGTGCGAATTCAAAGACTGG
CACAAGTCAAGTGCTTTTAAGTCGTTTTACGTTTGGTTGGGTCCGAGCTG
AGGTCCTTGGTGGTCTTATCAATACAGTTTTTTTACTAGCCCTTTGTTTT
TCTGTTATGGTACATTCATTAAAACGGTTTATTACACCGGAACACATATC
TAAACCGATTCCAGTTTTGATAGTTGGTGGTGTGAGTTTATTGGTGAATC
TTTTGGGCTTAATGATGTTTCGTACCACCCGAGAGAATTGTTTGTCCATT
TGTAGTAGTTGTTTTAAGAGCCATGATAAAACACCTGAAGTTGAAGGCAT
CTCTTTGATGAATGGACAACAAACAGCTAAAGATGTTTGGAGTTAAAAGT
CGTGAGCAATTCACGTTAAAATGGCAACTCAAATTCATTGCTATGATTTG
TTTTACTGGTTTACTATTTTTAATGAAAATAACAGTTGGCCAGCATCTGC
ACATCTCCTCTTCAAACGTCCTGAGGATTTCCGAAAAACTGTCAACTCCG
TTAAATCGTTTTTCCGCCGTGAAGGAATCGCTTGTATGACGTTCCAGCCT
GAATTTCTACCTGAAGAAGATGTTGATGGAGAACAGGCTGCTGACGCCAT
GGTGATGTTTAGCCCGGACCGATGTTACTTCAAATGTGCAAAGAAAGATT
GTCAGACATTGACATGCTGTGATGTTTCAGATGATAAAGATAGCATCACC
AATACTGATTCTTCTCCTTCAAGTTCAGAATGTACTTTTTCACCAGATAG
AACTTCATTGACATTACTTATGTCTTAACACGTAAACGCACGTATTCACA
CTCACGTGGTCACGAAGTGTCATGGGAACACGAATACCAAACACCACATT
CGCTAAACATACGCGGTGTATATCTACACATACTTGAACATTTTCTTATC
TCCATCATTGTTATTATGTCTGCTCTCCTTATGTTACACTACGAAGGAGA
AACATGGATTGATTATGTAGATCCTGCTTTCACTCTCCTAGTGGTGGCTA
CCATTTTGTACTCCACCGTACCGCTTTTTCGTGAAACTTTGATCCTTTTC
ATGCAATCGGTACCGGCTAATATACAAGTAAAAGACATGGAAGAGAGACT
GTTGAAACACATACCGGAAATTTTGTCCGTTCATGAACTCCATGTGTGGC
AACTTGGAGGTGATAAGGTTGTAGGTTACAAAATCTATGGCTTTAGTTGC
TGATAGTTTTCACATGATTACCGATTTCGCTGCTCTTACTATTGGTTATA
TTGCATTAAAATGTGCGAATTCAAAGACTGGCACAAGTCAAGTGCTTTTA
AGTCGTTTTACGTTTGGTTGGGTCCGAGCTGAGGTCCTTGGTGGTCTTAT
CAATACAGTTTTTTTACTAGCCCTTTGTTTTTCTGTTATGGTACATTCAT
TAAAACGGTTTATTACACCGGAACACATATCTAAACCGATTCCAGTTTTG
ATAGTTGGTGGTGTGAGTTTATTGGTGAATCTTTTGGGCTTAATGATGTT
TCGTACCACCCGAGAGAATTGTTTGTCCATTTGTAGTAGTTGTTTTAAGA
GCCATGATAAAACACCTGAAGTTGAAGGCATCTCTTTGATGAATGGACAA
CAAACAGCTAAAGATGTTTGGAGTTAAAAGTCGTGAGCAATTCACGTTAA
AATGGCAACTCAAATTCATTGCTATGATTTGTTTTACTGGTTTACTATTT
TTAATGAAAATAACAGTTGGCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040878XLOC_040878Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065201-exon-scaffold_433-1575043694:242833..243113TCONS_00065201-exon-scaffold_433-1575043694:242833..243113Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1575043694:242338..242776TCONS_00065201-exon-scaffold_433-1575043694:242338..242776Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1575043694:241319..241714TCONS_00065201-exon-scaffold_433-1575043694:241319..241714Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1575043694:237607..239008TCONS_00065201-exon-scaffold_433-1575043694:237607..239008Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1575043694:236205..236241TCONS_00065201-exon-scaffold_433-1575043694:236205..236241Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1510915933:242833..243113TCONS_00065201-exon-scaffold_433-1510915933:242833..243113Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1510915933:242338..242776TCONS_00065201-exon-scaffold_433-1510915933:242338..242776Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1510915933:241319..241714TCONS_00065201-exon-scaffold_433-1510915933:241319..241714Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1510915933:237607..239008TCONS_00065201-exon-scaffold_433-1510915933:237607..239008Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1510915933:236205..236241TCONS_00065201-exon-scaffold_433-1510915933:236205..236241Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1491911889:242833..243113TCONS_00065201-exon-scaffold_433-1491911889:242833..243113Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1491911889:242338..242776TCONS_00065201-exon-scaffold_433-1491911889:242338..242776Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1491911889:241319..241714TCONS_00065201-exon-scaffold_433-1491911889:241319..241714Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1491911889:237607..239008TCONS_00065201-exon-scaffold_433-1491911889:237607..239008Clytia hemisphaericaexon
TCONS_00065201-exon-scaffold_433-1491911889:236205..236241TCONS_00065201-exon-scaffold_433-1491911889:236205..236241Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065201-proteinTCONS_00065201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:236205..243113 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.03584	5.41214	2.77387	2.81431	21.8621	14.1816	13.723	14.7071	10.6393	11.9492	8.47266	7.35227	6.77828	6.40273	6.67221	7.67636	10.467	8.2499	7.61989	10.026	8.55354	8.72935	15.7615	17.3241	7.1116	8.92628	21.6471	15.646	20.3937	17.5288
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027470Cation_efflux_CTD
IPR002524Cation_efflux
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008324 cation transmembrane transporter activity
Blast
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BLAST of TCONS_00065201 vs. Swiss-Prot (Human)
Match: ZNT10 (Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 1.118e-38
Identity = 120/424 (28.30%), Postives = 210/424 (49.53%), Query Frame = 3 
Query:  219 KFIAMICFTGLLFLMKITVGQVTKSMALVADSFHMITDFAALTIGYIALKCANSKT-GTSQVLLSRFTFGWVRAEVLGGLINTVFLLALCFSVMVHSLKRFITPEHISKPIPXXXXXXXXXXXXXXXXMMFRTTRENCLSICSSCFK--------------------------------SHDKT-PEVEGISLMNGQQTAKARKR---TYSHSRGHEVSWEHEYQ-------TPHSLNIRGVYLHILEHFLISIIVIMSALL--MLHYEGE---TWIDYVDPAFTLLVVATILYSTVPLFRETLILFMQSVPANIQVKDMEERLLKHIPEILSVHELHVWQLGGDKVVASAHLLFKRPEDFRKTVNSVKSFFRREGIACMTFQPEFLPEEDVDGEQAADAMVMFSPDRCYFKCAKKDCQTLTCC 1343
            + + M+  T   F+ ++  G +  S+AL++DSF+M++D  +L +G  A   A   T G S       T+G+ RAEV+G L N VFL ALCF++ V ++ R   PE I  P  VLIVG + LLVN++GL++F    ++C +  + C +                                + D T P  +    + G    + R++    +++  G   + ++E +          +LNIRGV LH++   L S++V+++A++  +L  + E    W  Y+DP+ T+L+V  IL S  PL +ET  + +Q VP  + ++++  +L   +P I SVHE+H+W+L   K++A+ H+ + +   ++     ++  F   GI  +T Q      E+VD ++  +   +     C   C  K C    CC
Sbjct:   10 RLLFMLVLTVAFFVAELVSGYLGNSIALLSDSFNMLSDLISLCVGLSAGYIARRPTRGFSA------TYGYARAEVVGALSNAVFLTALCFTIFVEAVLRLARPERIDDPELVLIVGVLGLLVNVVGLLIF----QDCAAWFACCLRGRSRRLQQRQQLAEGCVPGAFGGPQGAEDPRRAADPTAPGSDSAVTLRGTSVERKREKGATVFANVAGDSFNTQNEPEDMMKKEKKSEALNIRGVLLHVMGDALGSVVVVITAIIFYVLPLKSEDPCNWQCYIDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGVNMEELMSKL-SAVPGISSVHEVHIWELVSGKIIATLHIKYPKDRGYQDASTKIREIFHHAGIHNVTIQ-----FENVDLKEPLEQKDLLL--LCNSPCISKGCAKQLCC 415
The following BLAST results are available for this feature:
BLAST of TCONS_00065201 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNT101.118e-3828.30Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE... [more]
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