XLOC_040878 (gene) - C. hemisphaerica

Overview
NameXLOC_040878
Unique NameXLOC_040878
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_433:236205..243113-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040878 ID=XLOC_040878|Name=XLOC_040878|organism=Clytia hemisphaerica|type=gene|length=6909bp|location=Sequence derived from alignment at scaffold_433:236205..243113- (Clytia hemisphaerica)
ATAGGATTTAGAAAAAAAATTATAGTTGACAATAAATAAATTTGGTGTAC AGTTTTATGAAAACACTGGCATACAAAAGATTGAAGAGAGACCTAGATCC TACGTTTTTATTGGTTGAAATGTGGAAATTGAGTTGAATCAACATAAAGA TAGAAGCGAAACCCTTTGAAATGTTTGGAGTTAAAAGTCGTGAGCAATTC ACGTTAAAATGGCAACTCAAATTCATTGCTATGATTTGTTTTACTGGTTT ACTATTTTTAATGAAAATAACAGTTGGCCAGGTTACAAAATCTATGGCTT TAGTTNGCTATTTTTAATGAAAATAACCGTTGGCCAGGTTACAAAATCTA TGGCTTTAGTTGCTGATAGTTTTCACATGATTACCGATTTCGCTGCTCTT ACTATTGGTTATATTGCATTAAAATGTGCGAATTCAAAGACTGGCACAAG TCAAGTGCTTTTAAGTCGTTTTACGTTTGGTTGGGTCCGAGCTGAGGTCC TTGGTGGTCTTATCAATACAGTTTTTTTACTAGCCCTTTGTTTTTCTGTT ATGGTACATTCATTAAAACGGTTTATTACACCGGAACACATATCTAAACC GATTCCAGTTTTGATAGTTGGTGGTGTGAGTTTATTGGTGAATCTTTTGG GCTTAATGATGTTTCGTACCACCCGAGAGAATTGTTTGTCCATTTGTAGT AGTTGTTTTAAGAGCCATGATAAAACACCTGAAGTTGAAGGCATCTCTTT GATGAATGGACAACAAACAGCTAAAGGTATATATTCTTCTTGATTCAAAA TTCTAAGAACCAATCAATCAATGAGCCTTGGTAACTCTTTTTTTTTCGTG ATTCCCAGCATTTTATAATAAGATCTTTTGAGTTTTGAGCATCGTGTTTT TATGGGGGAAACTGTTCTTACAAGAAGTGTATTACGGCCCAAGCTTTGAT TTCTCTTCGTGAAAATATAGTATTTGTTGATCTCAGTTCGTAAAAGCGTA TTTTTATAATTTTTTCATTTTCTTTAATTGCCGAAATAGATTGTTCTAAC GCGTTCTGTCAAATTCTCACATTTTAAACTTTTTCTGTTAAGGCCGGTCT CCACTTGCGCGCGCTGCGATCGCATTGGAAAAAAGGTTACGTCATAAAAA TGTAGTGCGCGCTCGAAAAAAAAGTTGAACACATTTCAACTTTTTTAAAC CGTTACGTCAAATTGCACCAATGGAATTGTTTCATTTTTCTTTTGACCAA TAGCGTGGAAGCTTTGCTCGAAAAAGTGCGATCGCAGAGCGCGCCAGTGG AGACGGGCATTTACACGTGTAACCACGGATGTTTCTTTTGACAACCACGA ACTATCGCGTTTTATTGATTTCTAGTTTTTTCATTTTCATCTCTTACAGC ACGTAAACGCACGTATTCACACTCACGTGGTCACGAAGTGTCATGGGAAC ACGAATACCAAACACCACATTCGCTAAACATACGCGGTGTATATCTACAC ATACTTGAACATTTTCTTATCTCCATCATTGTTATTATGTCTGCTCTCCT TATGTTACACTACGAAGGAGAAACATGGATTGATTATGTAGATCCTGCTT TCACTCTCCTAGTGGTGGCTACCATTTTGTACTCCACCGTACCGCTTTTT CGTGAAACTTTGATCCTTTTCATGCAATCGGTACCGGCTAATATACAAGT AAAAGACATGGAAGAGAGACTGTTGAAACACATACCGGAAATTTTGTCCG TTCATGAACTCCATGTGTGGCAACTTGGAGGTGATAAGGTTGTAGGTAAG TTTGACATATTTCAGCTGCCTCTTTGTGATACTTCCATCAACCCTTAGCT GCGCTTTCTGGTTTTAAGGGGACAGGTAGTGAATTTACAAAGAAATGACC TCTGAATTCTTTTTCTTTGAGAATGTTAATTCAACGACTTTACACATTTT GATGTCATTCCTCCCTGGTAAACTCGAGCCCAGTCTTCAAAGGTTGATAG AACGATTTATACGAATCGGTACATTTTGAGAACATTCTGAATTCTTTCAG TTTTTGAATTTCATTTTCATTTCTCTCCGTTATTCTTCATTTAGGGAATA GCTAGATTTTTCCTTATATTTTTAGCCTACAGAATAAAAAGCTTTTGAAG GCTTTGAGCTAAAAAATTTGTACCAAAACACAATACGGTTCTTTCGGAAA ATGAGTGGCCCGATTGGTATCATATGTATTTCTAGTATTTCAAATCAAAT ATTAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTGCTCATCA ATTTTAATTTACAAGCCTTTTCGCATTGGATTGACACGTATGTGAAGCAA GATTTGTCAGAAAGAGGAAAATGAAAATATTTTTTGCTTATGTCAGCCAG GGATATGTTATAGCGGAGCTGGATAACGCAAATTTAAAAAAGCCTTGTTC TATGTCTGTCCCTGACATTAAAATTTGATATGAAATTTAACTTTTATAAT TACAAACTCGTGAAATTTGGATTTCCTCTTAGCCAATGATTCTGCTGCTG CATTTATCGTTCACGATTAAAAACTTTTAATTATCAAGAGGGTCTGTAAA ACATTGGTGAATGACAATTTTAAAAAATGAAAAACATTGTTTTCGTAAAG TTATAAGAAGTTTCTTCTCTAAGATTATAAATAGTACTTTTTCATTTGAA ATACCGCGCTACACCGCGGGTTGCCTCTTTCTAACTGATATTTTCAGATA GCAAGTCGGTATGTCTGATTATGGAAAAAATTTCAAGTCAATTGAAACAA TATTTGTCAAAATATTTACATCCGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNGATGGATTTCTATTATGAACAGTTTACAATA GAAAAGACAAAGAAGCAATCCGCTAAGGAATTCTCGTCCTTCATCCAGCT CCGCTATAACATATCCCTGTGTCAGCATAATATAACAAAAGGCATACACT GTTCTGATATGAAATATGTGCCTCATAACGGGAACACTTTAAAATCTCTA CTATAATAATACTTGGGAGGTTTTTATCTTCTCTTCGGTGAGTGCTAGAT AATTTAATAGAGTTGACTAAAATATTATTTCGTACTTAAGAGTTTCATGG CGCCTCCGCCTCAGAGTGAATCTCTCAATAATAATGCAACACCTTTCTGT TTCAGCATCTGCACATCTCCTCTTCAAACGTCCTGAGGATTTCCGAAAAA CTGTCAACTCCGTTAAATCGTTTTTCCGCCGTGAAGGAATCGCTTGTATG ACGTTCCAGCCTGAATTTCTACCTGAAGAAGATGTTGATGGAGAACAGGC TGCTGACGCCATGGTGATGTTTAGCCCGGACCGATGTTACTTCAAATGTG CAAAGAAAGATTGTCAGACATTGACATGCTGTGATGTTTCAGATGATAAA GATAGCATCACCAATACTGATTCTTCTCCTTCAAGTTCAGAATGTACTTT TTCACCAGATAGAACTTCATTGACATTACTTATGTCTTAAATAGACTTCT AGATAACAACGTTGGAATGACTGCTGTAATTGAAACAATGTAGTTGCTAT GGGGGGAAGTTCAAGTCTTTTTGTTGGAATACAGTCGAAACACATAGTGT TGCATCCGTTCCATCAGTAGATTAGAATTCTTACCTTATTTTCCAGAATG TGACGAAAAGATTTCCAAGATATAAGAGATAAGGGAGTGTTATCAATATT TTGCTCAAAGATTGTTAAAGCACCAAAGCCTGGAGTTTAAAGTATCGAGA TATCGACGTGTGTTATTGCTTAAAAAGTGATTTCCAATAAAATCACATAA ATTTATATTCTTCTATATTTTAATATATAAAATCCAGTTAAAATGGATCG GTTTCTCACTGTGTGTAGTTTTGATATCGTGAAGAACACCTGATTTACTC AAAAAAACTTACAGATTATCAAATAAACTCTACACCAAACTCACAACCAG GGGGTCATGCAGTTACTATGTAAAAACACTTTACTGGTGGAACAAATTAC TAAATTCACTAGAAATATAAATTTGGGCCAAGTAATTGGGGAAAAAGGCT CGTAAAGGCTGGTGCATTCAAAATTTTAATTGAAAATTAGTTTTACCGTT AGTAACTGCAAAAGGTATTTATAGGGTGGTATAGAATTGTTAGCTCCAAA AAAGAACTTACTGCTTATAATGCCTTGTAGTAACTACATGACCCCCTGAA ACTACGTCTTTTTAAAAGAGTATAGTCTACTTTGATTTACGTTATCGTGA AATTATAGAATTATATTTTTTACGAAAAATTTTTATACTGCATCGCAATA ATTTACCTAGATCTTTGTAGTGACACAGCGAGTTTTAGTAGAGGTCAACT AAACTTTAATGGGAAAATTGACTCAAAGGGAGACTAGGGGAACTTTTTCT AAAAAAGCTAAAATATTTTTTGTAGATCATTTATTGAGCTCCTTGAAGTA GTTAATCTTTCAGTATATTATTTTATGATCATTACACTTTTTCAGACTTT TGAATGCCTTTTTCTTTCAAATGCTTGAAATTTAGCTGAAAATATCCTGA GGCTGACATCGTTTTTTAATTGTCTAGAAACACTTTTCTTTTTCCAATAA AAATTGTATTAGAACAAGAATAAGAACAATTTAAGAACAATGCTAAGTCT TGAATTGCTAAAGTTTAAGCAAATATCAAAGGTCAAGCTAGTAAAAATAA GGCATTAAACCTAAATAACATCAGTTAAATACCCTAAAATTAAGCAGGGG GGGTCAGGGTCCAGGATACCAACCCAGGGCCCAAAAACCTGACTTTTCGA GATTTGAAAGTAGTAGACACCACCACCCCCTAAANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNATGCAAAAAGTTATATGCATAAGATACTGCATACAAGGGACGCTAA ACAGAATCTGTGGATGTTTTTATTCAAAGAACATTCCTCTTATGAATCAC TTATGTACCACACTTTAGACTCCTGAAAGTGAAAACAAGTTTTTCTCATT CTAACACAACGTAAATTAAGTTTTTTGAACTAAATTGGCAAAATGTATAA AGTTCATAAAACAAGTTGATAAACTAGACTAGATAAAAATTTCATTGTAT TAGGCACGCCTAGAGTCTTTGTAACATTATCCTATATGATGAGCGCCCGG GGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCACT GCTTACTCCACCCAAATTTATCACGCCTCTCCTAAACTATTCCCTTTTCT ATTGATCTTGTGTAGACGATAGGATCTTTGTAGTGACACAGCGAGTTTTA GTAGAGATCACCTAAACTTTTTTAATGGGAAAATTGACTCAAAGGGAAAC TAGGGGAACTTTTTCTAAAAAAGCTAAAATATTTTTGTAGATCATTTATT GAGCTCCTTGAAGTAGTTAATTTTTCAGTATATTATTTTATGATACATTA CACCTTTTCAGACTTTTGAATGCTTTTTCTTTCAAATGCTTGAAATTTAG CTGAAAATATCCTGAGGCTAACATTGTTTTTTAATTGTCTAGAAACACTT TTCTTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065202TCONS_00065202Clytia hemisphaericatranscript
TCONS_00065201TCONS_00065201Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065201-proteinTCONS_00065201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:236205..243113 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.04 5.41 2.77 3.13 25.28 16.58 16.69 19.12 12.09 14.01 8.76 7.35 7.16 7.76 6.67 8.02 10.47 8.47 7.92 10.34 8.83 8.73 15.76 17.92 7.72 9.2 23.22 16.47 21.96 18.8