TCONS_00064135 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064135
Unique NameTCONS_00064135
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3836

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064135 ID=TCONS_00064135|Name=TCONS_00064135|organism=Clytia hemisphaerica|type=transcript|length=3836bp
ttttgcacatagTACCAAAAGTGTTCCGCATCCTTGCGAGACATGTACAC
GCAAATTAATCAACCTTTTGTCACGCTGCGCGCCGtcatttaaattcatt
ttttagagTAATATAACACAAATTTAAAATGGCTGATGAAATTCAGAATG
TTATGGAAATTaccaaagaagaagaagagcaaaaaagcaaaaatgaaagt
gatgaaAATAAACCAAAGCTTTCACGTCATGAGAGTTTGAAAGAATTTCT
TGTAATGACGGATGAAAAAGGAGATAAAATAACTTTGGAGGATACTGGAA
TCGATGatttgatttccaaagaaacAGCTGAACTAACAGATAATGAACGA
ATGTTTCTATATGAAAAAGCAATGTCTTTTCGTGGCCTGGGAAGTAACAA
TCATGCTTTATTATGCTTTCTTGGTTGCCTGAAAGGCTTGAAACCATCCT
CAAAATCGAAATTTACAATGTTACCTCAATGTATGACTCATATTTCCGAG
ATTTACGCAACAGCTGGTGACTACCAAAGAGCTGTTGAATTTATGCAAGG
AACAAAACTTTATTATGAGACTGCTATTATTGAATCTGGTCTGCAAGTAG
ATAAATATAAAGAATTGTCCAGTGAGAATTATTCTCCTTTGGACTTTGAC
CCTTGTTTAGATGAAGCAAAGAGAGCAAATGAGTATGAACGTTTAGCAAA
CTCATGTTTAGagcaacaaaaatttcaactAGCTTTAGAATATTGTGGTA
AAGCGACTAAATTAAGACAGAAGGCTTATGGAGATGAACATCCGTTGACA
ATCAAGAGTTTAGATTTGTTTACCTTGATCTATGCTGAAATGGGGAAAAG
TCAATATTCCGAAGCAATGAATAAGGTTGGAGATATTGTGAAACAGTATA
AGATTGAATCGGAACAAGCTCAAAAGAAAGCTGTCCAGGCTGATGCCTCA
AGTGAGAAGGATAATAATGAAACAACAAAGAAAACTGAAGACAGtgATGA
TTCTACTGCTGCTGGGGACATTAATCTAGATGGAACGAAAGGAGATCAAG
ATAAGGACAATGACGAAAATAACATCGAAACTaatgatcaaaatgaaaaa
acagatggcaataaaaaacaacaagtaCATTTTGAAGAAAACCCAACTAA
CCAGGACAACACAGAGCAACATACCCCTGAAATTAGTTTGTTAAACGAAA
TCACAcctaaaatgtttttcataGTTTTCCTCTTTTCATCTTTATCGGCT
GTCTTCGCAACAGTGTCATGGTGTATTTATACTGATTCTACGATATGCCC
GACTCGAGGTTACTTTTATGCTAAAGCGAAGTACCTGTATTACTATTACT
GGGTGACTACGGACCCTGATGTTAATTTATATTGATCGTGGTGTAGGACG
GTCATAAATACATGTCTTTAGTTTTTGAAACCTTTAGATGTTATTGACTT
TTGGGACTATTTTTTGGGAATATTTCCGATTTTCTATAAAATTGATTGTT
TCAGagtccaaaaatgtttttaaaacattttcttggtattttggccatcg
aagtcttatgttcttttatagtttgtttttagtttgttcttagttttttc
ttacaagGGAAACTTGTAATGAGATTTCTCCAGGGAGATTTGCATCAGTA
TCGAGTAACCCGCACCctgtcaatcaaataaataCCCTACCAATCTATTT
TTAGTCAGACCAACTTATATCTAAGTAAGAATGTGTTAAAGAACTGTTTA
CTCTGTAAAAAGGAATACATGAATCTTTTTTTACCTCCGTAAGTCCCAGG
TACGgccgcaaaaacaccaaattagaaaaaacagtctctcgtagggtacc
tttttggtgGAATTTGAGaaactttgagaaaattttggaatttcagtcct
tTCACGgtcactttttccaaaaaacgaGTCCCCAtagggtccattttttg
aaCTTTAGCGGGACACCCTCGTCTGTCAGCAAGGGTAGCCTCCCTCCCAC
GGCTGTCATTTATACCAGGATCCTGACATTAAACAAGCTAGAGATTTTGA
AACGAAGGTCAAGGATATCGAGGTGTTCAAGTGCTTTTAAGCCACATTAA
AGGATTAATACGGCCAGGGCCTTATTAAAAGTGCGGGCGGGTTAGCTCAT
GTACGgggcaaaaaaaattcccaCGAGAATCTCATTCTTATCGTATAGTG
TTGAAAGTTAAAGGTGTCGATTTTTACGATTTTATGatttaaatatttat
taaaatttaatttattttattcgTAATGATAATTTTTAATATTAATTGAT
TTTAGCAGTCAGGTATAAATGGGTGTTacttttcaaaatatgtttcaatt
ttcaaacttcaataCATATGCACAAGAGCAGAACGAAGTAATTCACCCCT
CGCTGAATATACAGAATTTATTTCTTCTCGTCTCGATTATTTCgtgcaat
tttgaaaaaaagcgaaataatatttttttcatcccATTTAGTTGAGAAAT
CCTAGCTTACTTTATTTTTGCTGTTGACAATATTTATTATTAACGTCTGA
TATACGAGGGTCAGAAATTTGGCTACCTATTTGGGTACTAGAAAAATGGG
GAATCAGCGCGGAAAATATTGTAATTTGCACACACGAgggaattttagat
ttagaaatccagaaaatatcaataaatatACTCCAGGTACcaaaattgac
ttaaaataATGGAGTTCTTAAACTGGAATTAACGGGGGATTCACCCTGTT
CGCCCTGGGTTGACTCGGATCCATGATGCTTTGCggctttgaaaattaaa
acaattaaaacgCTGAGTCTGACGAAGAATGTCAAGTTTTCGTGTTTTTC
AATATCTTATGCTATTTTATATTGGTGGAAAATATTATCATATAAATTTA
AGGCTTGGgagacacgagaagttttttctgcgttggtgcaatgcaagatg
ctccatcccaccaacctgaaacgctttctcgtgtctttgggtatttccct
cactttttgtcccatgaaacaaaaaaaagaaaccataagaccgcactttt
ttcttgtgttggtgggatggagcatgttgatttgaaaaaaaaacttctca
tgTCACCGAGCCTTTAGACCGCATTCCTCTCTCTCTCTATATCACCTCAG
GATCTGTTAATGCACGTTTACCTTGACTTTTTATTTCCCTCTAACGATTT
AGCAGCGTAAAGTCAGGCCGTGACAACGATTTTTTCGGCTTTCCATTCCG
GTCTGTAAGTTTTTTTAGGTAGCGAATTGGGTAACCAACGTTTTCAACTG
ACCCGATATACGATGtgtagatttttttaaattgttttatttatgGAAAT
TTGATTTAGGAAACTTTTTATAAGGAAAATCTCTCTTTAAAGCATCTTTG
atattttcgaaatatttttactatagtttgatttttttttcaattaatta
gCCATTCGATGAgtaatgatattttgaaaattaaattaaacaAGATTTAA
ACATATTTCTTATGGTATCGCCTCAATTAATTGAGCCCGGAAACTATGTA
ATGCAACTTTTTTCGCGAGTCTgcgttttaaaatatttttttgggaaCGA
GCATGAAATCAGACGAATACGAGGATATTTCCAAAACTTCACGTGGATTT
ATTTTCATGATTCAACAATCTCATGCGATTTTACGAAAAGGGATTGAATT
CAATTGCTAAAAAGGCATCTTTTAATCTAATCTTACACAAGCGCTCATAT
TGAAACCAAcactttcttcattttcatttgtttgtgtgtaaaccacgcgg
gtcacacgttctggatgggaaataaatacccctttc
Run BLAST on NCBI

protein sequence of TCONS_00064135-protein

>TCONS_00064135-protein ID=TCONS_00064135-protein|Name=TCONS_00064135-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
MADEIQNVMEITKEEEEQKSKNESDENKPKLSRHESLKEFLVMTDEKGDK
ITLEDTGIDDLISKETAELTDNERMFLYEKAMSFRGLGSNNHALLCFLGC
LKGLKPSSKSKFTMLPQCMTHISEIYATAGDYQRAVEFMQGTKLYYETAI
IESGLQVDKYKELSSENYSPLDFDPCLDEAKRANEYERLANSCLEQQKFQ
LALEYCGKATKLRQKAYGDEHPLTIKSLDLFTLIYAEMGKSQYSEAMNKV
GDIVKQYKIESEQAQKKAVQADASSEKDNNETTKKTEDSDDSTAAGDINL
DGTKGDQDKDNDENNIETNDQNEKTDGNKKQQVHFEENPTNQDNTEQHTP
EISLLNEITPKMFFIVFLFSSLSAVFATVSWCIYTDSTICPTRGYFYAKA
KYLYYYYWVTTDPDVNLY
Run BLAST on NCBI

transcript from alignment at scaffold_409:85827..91426+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064135 ID=TCONS_00064135|Name=TCONS_00064135|organism=Clytia hemisphaerica|type=transcript|length=5600bp|location=Sequence derived from alignment at scaffold_409:85827..91426+ (Clytia hemisphaerica)
ttttgcacatagTACCAAAAGTGTTCCGCATCCTTGCGAGACATGTACAC GCAAATTAATCAACCTTTTGTCACGCTGCGCGCCGtcatttaaattcatt ttttagagTAATATAACACAAATTTAAAATGGCTGATGAAATTCAGAATG TTATGGAAATTaccaaagaagaagaagagcaaaaaagcaaaaatgaaagt gatgaaAATAAACCAAAGCTTTCACGTCATGAGAGTTTGAAAGAATTTCT TGTAATGACGGATGAAAAAGGAGATAAAATAACTTTGGAGGATACTGGAA TCGATGatttgatttccaaagaaacAGCTGAACTAACAGATAATGAACGA ATGTTTCTATATGAAAAAGCAATGTCTTTTCGTGGCCTGGGAAGTAACAA TCATGCTTTATTATGCTTTCTTGGTTGCCTGAAAGGCTTGAAACCATCCT CAAAATCGAAATTTACAATGTTACCTCAATGTATGACTCATATTTCCGAG ATTTACGCAACAGCTGGTGACTACCAAAGAGCTGTTGAATTTATGCAAGG AACAAAACTTTATTATGAGACTGCTATTATTGAATCTGGTCTGCAAGTAG ATAAATATAAAGAATTGTCCAGTGAGAATTATTCTCCTTTGGACTTTGAC CCTTGTTTAGATGAAGCAAAGAGAGCAAATGAGTATGAACGTTTAGCAAA CTCATGTTTAGagcaacaaaaatttcaactAGCTTTAGAATATTGTGGTA AAGCGACTAAATTAAGACAGAAGGCTTATGGAGATGAACATCCGTTGACA ATCAAGAGTTTAGATTTGTTTACCTTGATCTATGCTGAAATGGGGAAAAG TCAATATTCCGAAGCAATGAATAAGGTTGGAGATATTGTGAAACAGTATA AGATTGAATCGGAACAAGCTCAAAAGAAAGCTGTCCAGGTATGAAACTTT GTTTGTctataaaattgtattttttatacaatacaccttttcgaccgtag ccgccaattgccgcgcgggaaTTTTTTTGGCCGTTTCACAACCCTAAAAC ACCAccttcgcacctaaagacaatagaaaaaagtgtcaaaaaaggattag gtcaagtttagggtggtaaattaaataataaagtggcaggcacctgaccg cgcgactacggttgGTTGAATAATTGAATCTGCTACATGTTTCAATATCT TACCactttctgtttattttgtttgtGCAAATTATATGGTATCAAAGCAA AAACTACCcaaaaaatctaattcgaaatcATTGTATCTTATTGACTGGTA AATTGTTAtgaagataaatattttttaatttttcacattttctaAACAGG CTGATGCCTCAAGTGAGAAGGATAATAATGAAACAACAAAGAAAACTGAA GACAGGTAAGCCTAGCCTGGTTAAGcaagccagtttttacaaggtCAAGA TACGACTGAAGCAATATAGCATTATCGgcgctttaatgatttttatgatg tacgaaattttaaatttgccctcagtcacaacttaccatcagcaGATTtt accaagtgactgaatcaatctggattagatttctaggctaaggAAGCCCA GGGGTACTGAAGCAAGTATAGTGCACCTGTGAGCGACAAGGGTAGTTTTT AACCTTCTCAAGTCTGAAGTGATATTTCCCACTTTTGAGTTCTTTAAAGG GTATTatacaaaaacaatgaaaattatgaatCTCTTAAATCTTTcggaaa ttttctttcaaatttagtttttgtgtATCTGCAAATTGAGAACATTAACT TAAAAATCCTATTAACTGGTTTCAGTATATTCTTTTCTAGCAACCAAGTT GCTAAGACTCGAGTCCtgaaatttgtcatttttttcattttctcataaag taaaagctttttaaataaTCTAAGACAAACGATAGCCCTTCACCCAATAA AGTATAAATATGGTaataatatcaggggtggtccGAGCAGATTTTTCGGA AAATGAACTAGAGTGCTAAGCAACCCTGACCCGAAAAGTAGAGttgctta aaaaaaaagtgtacataTATCTTGTAAATCTGGAAAGGTCTGTATTGGCT TTTGTTTTAGCTCATCTTGATAATTGTTGTAAATTTCAGGTGTCTATTTT TGACACGATATTTTACGATGTCATAATGCTGTGATTattacgagaataaa ataaagtaataaaatctTAACACACCATCGAATTTCTGAAAGTTGGAGTT TTTAATTTCGGAAATAAATATCGGATTTTGATGAAGGCTTGGGGAcatga gaagtttttttcgcgtttgtgcaatgcaacatgctccgtCCCaacaacct gaaacgctttctcgtttctccaccccatttttcttatcagcgtgtctttt gggtatttccctcactttttgtcccatgaaacaaaaaaagaaaccacttt tttcttgtgtgggtgggatggagcatgctgcattgcaccaacgcgaaaaa gacttctcgtgtccccaagccttaagacAATTCTTCtgaatattttattt tacaattttagtgATGATTCTACTGCTGCTGGGGACATTAATCTAGATGG AACGAAAGGAGATCAAGATAAGGACAATGACGAAAATAACATCGAAACTa atgatcaaaatgaaaaaacagatggcaataaaaaacaacaagtaCATNac ttctcgtgtccccaagcttTAAGACAATTCTTCtgaatattttattttac aattttagtgATGATTCTACTGCTGCTGGGGACATTAATCTAGATGGAAC GAAAGGAGATCAAGATAAGGACAATGACGAAAATAACATCGAAACTaatg atcaaaatgaaaaaacagatggcaataaaaaacaacaagtaCATTTTGAA GAAAACCCAACTAACCAGGACAACACAGAGCAACATACCCCTGAAATTAG TTTGTTAAACGAAATCACAcctaaaatgtttttcataGTTTTCCTCTTTT CATCTTTATCGGCTGTCTTCGCAACAGTGTCATGGTGTATTTATACTGAT TCTACGATATGCCCGACTCGAGGTTACTTTTATGCTAAAGCGAAGTACCT GTATTACTATTACTGGGTGACTACGGACCCTGATGTTAATTTATATTGAT CGTGGTGTAGGACGGTCATAAATACATGTCTTTAGTTTTTGAAACCTTTA GATGTTATTGACTTTTGGGACTATTTTTTGGGAATATTTCCGATTTTCTA TAAAATTGATTGTTTCAGagtccaaaaatgtttttaaaacattttcttgg tattttggccatcgaagtcttatgttcttttatagtttgtttttagtttg ttcttagttttttcttacaagGGAAACTTGTAATGAGATTTCTCCAGGGA GATTTGCATCAGTATCGAGTAACCCGCACCctgtcaatcaaataaataCC CTACCAATCTATTTTTAGTCAGACCAACTTATATCTAAGTAAGAATGTGT TAAAGAACTGTTTACTCTGTAAAAAGGAATACATGAATCTTTTTTTACCT CCGTAAGTCCCAGGTACGgccgcaaaaacaccaaattagaaaaaacagtc tctcgtagggtacctttttggtgGAATTTGAGaaactttgagaaaatttt ggaatttcagtccttTCACGgtcactttttccaaaaaacgaGTCCCCAta gggtccattttttgaaCTTTAGCGGGACACCCTCGTCTGTCAGCAAGGGT AGCCTCCCTCCCACGGCTGTCATTTATACCAGGATCCTGACATTAAACAA GCTAGAGATTTTGAAACGAAGGTCAAGGATATCGAGGTGTTCAAGTGCTT TTAAGCCACATTAAAGGATTAATACGGCCAGGGCCTTATTAAAAGTGCGG GCGGGTTAGCTCATGTACGgggcaaaaaaaattcccaCGAGAATCTCATT CTTATCGTATAGTGTTGAAAGTTAAAGGTGTCGATTTTTACGATTTTATG atttaaatatttattaaaatttaatttattttattcgTAATGATAATTTT TAATATTAATTGATTTTAGCAGTCAGGTATAAATGGGTGTTacttttcaa aatatgtttcaattttcaaacttcaataCATATGCACAAGAGCAGAACGA AGTAATTCACCCCTCGCTGAATATACAGAATTTATTTCTTCTCGTCTCGA TTATTTCgtgcaattttgaaaaaaagcgaaataatatttttttcatcccA TTTAGTTGAGAAATCCTAGCTTACTTTATTTTTGCTGTTGACAATATTTA TTATTAACGTCTGATATACGAGGGTCAGAAATTTGGCTACCTATTTGGGT ACTAGAAAAATGGGGAATCAGCGCGGAAAATATTGTAATTTGCACACACG AgggaattttagatttagaaatccagaaaatatcaataaatatACTCCAG GTACcaaaattgacttaaaataATGGAGTTCTTAAACTGGAATTAACGGG GGATTCACCCTGTTCGCCCTGGGTTGACTCGGATCCATGATGCTTTGCgg ctttgaaaattaaaacaattaaaacgCTGAGTCTGACGAAGAATGTCAAG TTTTCGTGTTTTTCAATATCTTATGCTATTTTATATTGGTGGAAAATATT ATCATATAAATTTAAGGCTTGGgagacacgagaagttttttctgcgttgg tgcaatgcaagatgctccatcccaccaacctgaaacgctttctcgtgtct ttgggtatttccctcactttttgtcccatgaaacaaaaaaaagaaaccat aagaccgcacttttttcttgtgttggtgggatggagcatgttgatttgaa aaaaaaacttctcatgTCACCGAGCCTTTAGACCGCATTCCTCTCTCTCT CTATATCACCTCAGGATCTGTTAATGCACGTTTACCTTGACTTTTTATTT CCCTCTAACGATTTAGCAGCGTAAAGTCAGGCCGTGACAACGATTTTTTC GGCTTTCCATTCCGGTCTGTAAGTTTTTTTAGGTAGCGAATTGGGTAACC AACGTTTTCAACTGACCCGATATACGATGtgtagatttttttaaattgtt ttatttatgGAAATTTGATTTAGGAAACTTTTTATAAGGAAAATCTCTCT TTAAAGCATCTTTGatattttcgaaatatttttactatagtttgattttt ttttcaattaattagCCATTCGATGAgtaatgatattttgaaaattaaat taaacaAGATTTAAACATATTTCTTATGGTATCGCCTCAATTAATTGAGC CCGGAAACTATGTAATGCAACTTTTTTCGCGAGTCTgcgttttaaaatat ttttttgggaaCGAGCATGAAATCAGACGAATACGAGGATATTTCCAAAA CTTCACGTGGATTTATTTTCATGATTCAACAATCTCATGCGATTTTACGA AAAGGGATTGAATTCAATTGCTAAAAAGGCATCTTTTAATCTAATCTTAC ACAAGCGCTCATATTGAAACCAAcactttcttcattttcatttgtttgtg tgtaaaccacgcgggtcacacgttctggatgggaaataaatacccctttc

Coding sequence (CDS) from alignment at scaffold_409:85827..91426+

>TCONS_00064135 ID=TCONS_00064135|Name=TCONS_00064135|organism=Clytia hemisphaerica|type=CDS|length=3771bp|location=Sequence derived from alignment at scaffold_409:85827..91426+ (Clytia hemisphaerica)
ATGGCTGATGAAATTCAGAATGTTATGGAAATTaccaaagaagaagaaga
gcaaaaaagcaaaaatgaaagtgatgaaAATAAACCAAAGCTTTCACGTC
ATGAGAGTTTGAAAGAATTTCTTGTAATGACGGATGAAAAAGGAGATAAA
ATAACTTTGGAGGATACTGGAATCGATGatttgatttccaaagaaacAGC
TGAACTAACAGATAATGAACGAATGTTTCTATATGAAAAAGCAATGTCTT
TTCGTGGCCTGGGAAGTAACAATCATGCTTTATTATGCTTTCTTGGTTGC
CTGAAAGGCTTGAAACCATCCTCAAAATCGAAATTTACAATGTTACCTCA
ATGTATGACTCATATTTCCGAGATTTACGCAACAGCTGGTGACTACCAAA
GAGCTGTTGAATTTATGCAAGGAACAAAACTTTATTATGAGACTGCTATT
ATTGAATCTGGTCTGCAAGTAGATAAATATAAAGAATTGTCCAGTGAGAA
TTATTCTCCTTTGGACTTTGACCCTTGTTTAGATGAAGCAAAGAGAGCAA
ATGAGTATGAACGTTTAGCAAACTCATGTTTAGagcaacaaaaatttcaa
ctAGCTTTAGAATATTGTGGTAAAGCGACTAAATTAAGACAGAAGGCTTA
TGGAGATGAACATCCGTTGACAATCAAGAGTTTAGATTTGTTTACCTTGA
TCTATGCTGAAATGGGGAAAAGTCAATATTCCGAAGCAATGAATAAGGTT
GGAGATATTGTGAAACAGTATAAGATTGAATCGGAACAAGCTCAAAAGAA
AGCTGTCCAGGCTGATGCCTCAAGTGAGAAGGATAATAATGAAACAACAA
AGAAAACTGAAGACAGtgATGATTCTACTGCTGCTGGGGACATTAATCTA
GATGGAACGAAAGGAGATCAAGATAAGGACAATGACGAAAATAACATCGA
AACTaatgatcaaaatgaaaaaacagatggcaataaaaaacaacaagtaC
ATTTTGAAGAAAACCCAACTAACCAGGACAACACAGAGCAACATACCCCT
GAAATTAGTTTGTTAAACGAAATCACAcctaaaatgtttttcataGTTTT
CCTCTTTTCATCTTTATCGGCTGTCTTCGCAACAGTGTCATGGTGTATTT
ATACTGATTCTACGATATGCCCGACTCGAGGTTACTTTTATGCTAAAGCG
AAGTACCTGTATTACTATTACTGGGTGACTACGGACCCTGATGTTAATTT
ATATTGAATGGCTGATGAAATTCAGAATGTTATGGAAATTaccaaagaag
aagaagagcaaaaaagcaaaaatgaaagtgatgaaAATAAACCAAAGCTT
TCACGTCATGAGAGTTTGAAAGAATTTCTTGTAATGACGGATGAAAAAGG
AGATAAAATAACTTTGGAGGATACTGGAATCGATGatttgatttccaaag
aaacAGCTGAACTAACAGATAATGAACGAATGTTTCTATATGAAAAAGCA
ATGTCTTTTCGTGGCCTGGGAAGTAACAATCATGCTTTATTATGCTTTCT
TGGTTGCCTGAAAGGCTTGAAACCATCCTCAAAATCGAAATTTACAATGT
TACCTCAATGTATGACTCATATTTCCGAGATTTACGCAACAGCTGGTGAC
TACCAAAGAGCTGTTGAATTTATGCAAGGAACAAAACTTTATTATGAGAC
TGCTATTATTGAATCTGGTCTGCAAGTAGATAAATATAAAGAATTGTCCA
GTGAGAATTATTCTCCTTTGGACTTTGACCCTTGTTTAGATGAAGCAAAG
AGAGCAAATGAGTATGAACGTTTAGCAAACTCATGTTTAGagcaacaaaa
atttcaactAGCTTTAGAATATTGTGGTAAAGCGACTAAATTAAGACAGA
AGGCTTATGGAGATGAACATCCGTTGACAATCAAGAGTTTAGATTTGTTT
ACCTTGATCTATGCTGAAATGGGGAAAAGTCAATATTCCGAAGCAATGAA
TAAGGTTGGAGATATTGTGAAACAGTATAAGATTGAATCGGAACAAGCTC
AAAAGAAAGCTGTCCAGGCTGATGCCTCAAGTGAGAAGGATAATAATGAA
ACAACAAAGAAAACTGAAGACAGtgATGATTCTACTGCTGCTGGGGACAT
TAATCTAGATGGAACGAAAGGAGATCAAGATAAGGACAATGACGAAAATA
ACATCGAAACTaatgatcaaaatgaaaaaacagatggcaataaaaaacaa
caagtaCATTTTGAAGAAAACCCAACTAACCAGGACAACACAGAGCAACA
TACCCCTGAAATTAGTTTGTTAAACGAAATCACAcctaaaatgtttttca
taGTTTTCCTCTTTTCATCTTTATCGGCTGTCTTCGCAACAGTGTCATGG
TGTATTTATACTGATTCTACGATATGCCCGACTCGAGGTTACTTTTATGC
TAAAGCGAAGTACCTGTATTACTATTACTGGGTGACTACGGACCCTGATG
TTAATTTATATTGAATGGCTGATGAAATTCAGAATGTTATGGAAATTacc
aaagaagaagaagagcaaaaaagcaaaaatgaaagtgatgaaAATAAACC
AAAGCTTTCACGTCATGAGAGTTTGAAAGAATTTCTTGTAATGACGGATG
AAAAAGGAGATAAAATAACTTTGGAGGATACTGGAATCGATGatttgatt
tccaaagaaacAGCTGAACTAACAGATAATGAACGAATGTTTCTATATGA
AAAAGCAATGTCTTTTCGTGGCCTGGGAAGTAACAATCATGCTTTATTAT
GCTTTCTTGGTTGCCTGAAAGGCTTGAAACCATCCTCAAAATCGAAATTT
ACAATGTTACCTCAATGTATGACTCATATTTCCGAGATTTACGCAACAGC
TGGTGACTACCAAAGAGCTGTTGAATTTATGCAAGGAACAAAACTTTATT
ATGAGACTGCTATTATTGAATCTGGTCTGCAAGTAGATAAATATAAAGAA
TTGTCCAGTGAGAATTATTCTCCTTTGGACTTTGACCCTTGTTTAGATGA
AGCAAAGAGAGCAAATGAGTATGAACGTTTAGCAAACTCATGTTTAGagc
aacaaaaatttcaactAGCTTTAGAATATTGTGGTAAAGCGACTAAATTA
AGACAGAAGGCTTATGGAGATGAACATCCGTTGACAATCAAGAGTTTAGA
TTTGTTTACCTTGATCTATGCTGAAATGGGGAAAAGTCAATATTCCGAAG
CAATGAATAAGGTTGGAGATATTGTGAAACAGTATAAGATTGAATCGGAA
CAAGCTCAAAAGAAAGCTGTCCAGGCTGATGCCTCAAGTGAGAAGGATAA
TAATGAAACAACAAAGAAAACTGAAGACAGtgATGATTCTACTGCTGCTG
GGGACATTAATCTAGATGGAACGAAAGGAGATCAAGATAAGGACAATGAC
GAAAATAACATCGAAACTaatgatcaaaatgaaaaaacagatggcaataa
aaaacaacaagtaCATTTTGAAGAAAACCCAACTAACCAGGACAACACAG
AGCAACATACCCCTGAAATTAGTTTGTTAAACGAAATCACAcctaaaatg
tttttcataGTTTTCCTCTTTTCATCTTTATCGGCTGTCTTCGCAACAGT
GTCATGGTGTATTTATACTGATTCTACGATATGCCCGACTCGAGGTTACT
TTTATGCTAAAGCGAAGTACCTGTATTACTATTACTGGGTGACTACGGAC
CCTGATGTTAATTTATATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040210XLOC_040210Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064135-proteinTCONS_00064135-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064135-exon-scaffold_409-1491911889:85827..86764TCONS_00064135-exon-scaffold_409-1491911889:85827..86764Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1510915933:85827..86764TCONS_00064135-exon-scaffold_409-1510915933:85827..86764Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1575043694:85827..86764TCONS_00064135-exon-scaffold_409-1575043694:85827..86764Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1491911889:87176..87231TCONS_00064135-exon-scaffold_409-1491911889:87176..87231Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1510915933:87176..87231TCONS_00064135-exon-scaffold_409-1510915933:87176..87231Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1575043694:87176..87231TCONS_00064135-exon-scaffold_409-1575043694:87176..87231Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1491911889:88585..91426TCONS_00064135-exon-scaffold_409-1491911889:88585..91426Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1510915933:88585..91426TCONS_00064135-exon-scaffold_409-1510915933:88585..91426Clytia hemisphaericaexon
TCONS_00064135-exon-scaffold_409-1575043694:88585..91426TCONS_00064135-exon-scaffold_409-1575043694:88585..91426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_409supercontigscaffold_409:85827..91426 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.274932 0.306333 0.148365 0.188601 7.11367 5.44736 4.42138 4.69218 1.93 1.91182 1.04985 1.20224 0.853593 0.940059 0.408527 0.455158 0.501024 0.49317 0.79207 0.89163 0.645829 0.573998 0.510455 0.723879 1.06819 1.81696 0.636983 0.403243 0.290694 0.340638
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064135 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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