TCONS_00064135-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064135-protein
Unique NameTCONS_00064135-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length418

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064135-protein ID=TCONS_00064135-protein|Name=TCONS_00064135-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
MADEIQNVMEITKEEEEQKSKNESDENKPKLSRHESLKEFLVMTDEKGDK
ITLEDTGIDDLISKETAELTDNERMFLYEKAMSFRGLGSNNHALLCFLGC
LKGLKPSSKSKFTMLPQCMTHISEIYATAGDYQRAVEFMQGTKLYYETAI
IESGLQVDKYKELSSENYSPLDFDPCLDEAKRANEYERLANSCLEQQKFQ
LALEYCGKATKLRQKAYGDEHPLTIKSLDLFTLIYAEMGKSQYSEAMNKV
GDIVKQYKIESEQAQKKAVQADASSEKDNNETTKKTEDSDDSTAAGDINL
DGTKGDQDKDNDENNIETNDQNEKTDGNKKQQVHFEENPTNQDNTEQHTP
EISLLNEITPKMFFIVFLFSSLSAVFATVSWCIYTDSTICPTRGYFYAKA
KYLYYYYWVTTDPDVNLY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040210XLOC_040210Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064135TCONS_00064135Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR011991WHTH_DNA-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..279
NoneNo IPR availablePFAMPF13424TPR_12coord: 187..242
e-value: 4.8E-8
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..348
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 64..151
e-value: 0.12
score: 11.5
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 73..145
coord: 179..214
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 181..247
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 176..250
e-value: 1.0E-7
score: 31.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064135-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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