TCONS_00063854 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063854
Unique NameTCONS_00063854
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063854 ID=TCONS_00063854|Name=TCONS_00063854|organism=Clytia hemisphaerica|type=transcript|length=1187bp
CCGCCATCCAGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCT
TGATGGCGCgcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCG
ATCGAGAAGGCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAAT
TTCTTCGATCAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCAT
CTTGGGATAGTACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGT
CATTGCTTCAATGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATAC
CACACACGGCTTCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACT
TCAACACATCAGAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAA
TGTTTGGAACACTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGA
TCAGACCATCAAATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTC
ATGAACAAAATGAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTT
GTGGTTGGCACTGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACAT
GGGTGTTGTCGAACAACGACGCGAATcgagtttgaaatttcaaacGAGAT
GCATTAGAGCATTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAA
GGGAGAGTGGCTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAA
GAAGTATGCTTTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATA
TCTATCCTGTAAATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCA
ACGGGAGGATCTGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAA
CGCCAGATTTGATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGAT
TCATCAAGAAGCTCGCCATCGTCTATTTCAGTGGTGCATTCGTCTTGAAT
AGATGCAACTGATGATGCAGAGCTTTGACAATCTTCAAATGTATCGTTAT
CGTAATTTGCTTCTTCAGTTTCCTGATGTTTCTCTCCCTTCAAAGATGGA
ACNttatttttcgttttttagagAGAAAAACGTCACAcgcaaaataactc
ggaaaaataactcgaaaaaataaCTTAAGAATTCCAG
Run BLAST on NCBI

protein sequence of TCONS_00063854-protein

>TCONS_00063854-protein ID=TCONS_00063854-protein|Name=TCONS_00063854-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
RHPESWHVPLIALTCILMAREKILKSKQQKKMAIEKANETCLKNSPTDTI
SSIKFSPATSNFLLAASWDSTLRLYDVTNNLQRHCFNEGGAVLDCCFSDT
THGFCGGLEKAVKCYDFNTSEVQVLGYHTAPIKCLEHCPKTGLLITGSWD
QTIKLWDPREKQCVGTHEQNERVYTMAISGDRVVVGTAGRKVMVWDLRNM
GVVEQRRESSLKFQTRCIRAFPNKQGYVLSSIEGRVAVEYFDPSVEIQKK
KYAFKCHRVKTEGVEYIYPVNAISFHKGYNTFATGGSDGFVNVWDGXEEN
ARFDTVFNVRFDVSD
Run BLAST on NCBI

transcript from alignment at scaffold_404:51073..65638+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063854 ID=TCONS_00063854|Name=TCONS_00063854|organism=Clytia hemisphaerica|type=transcript|length=14566bp|location=Sequence derived from alignment at scaffold_404:51073..65638+ (Clytia hemisphaerica)
CCGCCATCCAGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCT
TGATGGCGCgcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCG
ATCGAGAAGGCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAAT
TTCTTCGATCAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCAT
CTTGGGATAGTGTAAgataattttgaatttgttttaaagccAGTCTGACA
GTTTATTTTTGTTGCTTCGATTGGTGAAATTTCAAGTCAGCAAAATCCTC
TCGGGTagctaatagccgtccccccgctaattaatttttcgtaaattttc
cacccaggacattcttattccaaccccccccttattaaatttgggaaaat
gtttttgaaagttccctcttttgtcctaattctgctacgtctacgaccct
cgacatggcccgagaattctcgggccaaaacttttattggaaatcatgtt
tttaaaaattggcccgagtgtggcccgagtatggcccgagctggcctgAG
AATTCGGGCTGTGTTCGGGCCACGCACaggccacgcacgggccacactcg
ggccaatttttaaaaacatgatttaaacaggggcgtgtaatttcaggact
gaatttttttaacattttctttgagaaaaacttggtttctcttaattaaa
tatatgaatgttgtaaattcatataaatattaaatgtcttatttggtatg
aaaacatatatttataaatatacttagggtggaaatatttgctagtaaac
tggtcctggttttaaactgaagcgtgtccacgggaatCAAATTCTACCCG
AAATactcatttcattattttacatCTGTGCGAAATTATAATTAAATCTC
AGTTCTAGATACCGTATTTCCTCTTTTTAGCGCCGTcctctaatagacct
tttcgcctttccatccgccatattgaattgtatgcaaaaattatggtggc
cgaattgccgtggtgaaattcccttagaaagaNNNNNNNNNNNNNNNNNN
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NNactgaaaaatcacccgcaaaggtaaaaaacaatccttattcggctgac
ggcaaattattctcctgggaatagagccgccaaatgatcaaatcaaaaca
ttgaggaagtgtgacgtcataattactgctttcagtttgtgtgttttgaa
agtttgatgtgtgtactccgtcttcgtggaatttttaaGAGCGCTGCCCT
CTAACATAGAATGCAACCCCCCTGGCTCTTAGGGGGGGCTAGAACCTAAA
GTTCTAGCTGGGGGCTCTTTTTCCTTAAGATCAGGGGGGGCTACTtactc
aggggggggggctatttgTTTAGGTCTGTTGACTGGGGGNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaattaaccaatcgggttagg
tatcggaattcctatgggagttcttttccaagatttgtaaattagctaag
tcggcaaaaaaacttttcctgggggtttgaggaataaacagaactgttat
catttgtattttattcaaccatataatattcaaatttgcgctcaaaaata
cttaaataaataagttaataatattcaatacactatttgtatctctcaga
aaataaacacttacagaacgacatagtttctcatttggaatacccccgtg
tttggaccattctatcgtgggcgaaaaatagggcggaaactaagtagcaa
cCTCaatgcaagattgccgcctcatctttattcgcccgcgcgaaaaCGCG
AGCTGATCATTTTTTCTAGCGCGCTCAatgggaaaaggaaagtgatcgat
attctttgaaggaaaaacgtcagaaacaaacccaaagatcaaaagatgta
ttttgttgttgagaatcgatcatgtgaagatgaaaaaaattctactatgc
gtttttttcggaacgctgaaaaactctaatttcgatcttctttaaggtaa
agaggttgcgagatttgggttagcgaggcaaaaatcgctaaaaaactggt
aaaatcgtaatcctcaaaaatcgaaggtCCAGCCTCACTGTTTGTGTGGA
CATGCAAAATGAAGACCTtgcattgtttgaaattttttccattctaacat
ttttgttttttctgtatTGTGGTGTGTGATATGTGATAAAGTTTGTTTAT
TGAAATGAATGACAAATAAAGAACGCAGCTATTTTCATGACTTTGTggtg
tttacaattttcttaagttAGAATTGTCTTCtactcacttttttcaaaat
aacagtttacttttcttataaaattttattttttatagaagGAAANNNNN
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ATCGCtacccccccctttataaaggggggggtgcGAACTATGGAACTGCc
atcattttttgctttttatttagccatatatttaaatttgcgctcagaaa
taattgaaataaataagttaataatattcaatgtactatttgtatctcac
agaaaataaacacttacaaaataagatagtttatcatttgtaacaccccc
gtatttggaccattctatcgtgggcgcaaaataagGCAGAAACTAAaggt
taaatctctttgacaacaaatttgttttgataaccccaccaagtttatca
atcatactttctgtcataacatgtcacgataactttcactgatagagcac
ccttttaacttttttgttttcatttaaaatgaccggaAACAAAGACAAAT
AGCGAGTGTGTATCTTGCCAcacgagtgacgtcaaacgctccatgcatcg
ttttgccactaatttgttcttctttgttccagacacttgcgtgtgttcca
ctacagatttttttcatattttgatttaaaagcctactcggtgcgaaaga
gaaatcgtgtattttttaatgcaccattcattaactcaaatcaaatgact
ttgaaggTTCGGTAAAATGGCGGCCGAATAttcgtcccatgttttgtcag
atagtcccaagttagagcagttgacggtagtctGCAAAGGAGCACCacga
agcaatcagtagaagagaccacttgtttttgttgcagattatGATATAAA
GTTCTCACAGGGATTTTTTGTCTAAGGGTTGTGTCAACtggtcagcattg
tattgataCAAAGGCAAAGATTAAAAggggtaagactagcctagtttcta
atcctgatataggagtttaagtctagACTGCTTGGTGTTTTTTTAAACAT
TAGTTAGCTAGTTCGGCAGAAGAGTTgagatagaataaaaacaaaccttc
tttcttgcgtttactctttccttcccaagcttttggttgtgtttttcaat
ctttaatcattattttttctttgcaaagTTTACATAGCACGAGAGCCACC
AATGGTTAAAAACTTatgtacatatttttttctttattattcttCAATTT
CAAATAACCTAACCTAACATATGTAGGTTTTGGAATTTACAAGAAATGAA
CCTTTAacagctttatctgaataaatctggttgaccTTCTGTCAGTTTTC
ATtctgtacgttttttatccacatgGTGAACTTGTTTCCCCGTTTTCCCG
atgattaaaaattggaactttcctgTGGGCGCAATTAGTGGTACCGGCTT
AGCGAAATATTTTGCATGAAAATTtacctgtatttcaaaatttcacaata
aatagaactatttacaatttatttttattaacgGTCGTTGAATTGAATCC
ATGTTgtcatatttaatgatgtcataatcaatgccatgcatattttgtca
gcgctgtgcatattttgtcgtgcatattttgtcaacatctttttcattgg
ataaataccactaaaattagcctggatatccaagctcaaaattttagaaa
aaacaaaatttctcaaCATACAAAGCTCTAAATttagggcagcaaaacag
aaattaataaaaagcagacttacaagatctaaaaccatttaaaacatcca
aaggttACCCTAAAGTCCATAAACAAATTTGCATGTATCACAAtaaccaa
ccatgttttcttggaaaatgaacttgtgTCTGCTTGCGTCTGGGTGAATT
GCACCAAATCTGTACCGtagttttgaaaacaagaaaaactgtCTTCAAAT
TGCCATATAATTAGATGTGTTAGGTATTAGAACTTGAGTTTTTGTGGATT
AGGTACTGTGGCAGAAGGTATCAGTCAAGACTAAATCATTTTTTGATACT
TCGATTCCTCTTTGAAATATTAGCAAAAATCTGGCATATATATGCCTGTC
TTTAATCCactcaattttaaatttggctttATAAATTCTTGTCAATTTTA
TGTAAAAGTATTACTCTATAAATGGAAgtatgatttgaaaatttcaattc
aaccAAATTTGAGTCATAACTGAAAAGGTGTGACTGACAGGACacaattt
tgttgttttcaatGTTCTAATGGTCATAATCATACATATGAAAAGCAACT
TCCCAGAGTATTAGCATGCAAAACTCTTTCTTCGCTCCATAATTAccaat
tataaattttgatgttcgcTCAACTTTTAGAAATTTCAACTGGTTTCTGA
AGGCCTTCGAATTTGATCTCGCTCTTGCGCACCAAGTTGTCGGCACAAAT
GTGCCGGAAAATTAGGGCACGAGTGTAGAGGCCAGCTCTGGTTTGAACAG
TCTAGAATCCGCGCTCTACTCTACTAGCCTTTGCTTGGAGTGGAGTTGCA
GGTTTATGTATGGAGAATCTGTATTGGCTTCAGAACTCCCAATGAGCCCT
GAttgtgttggtttcagtcagacgGAGACGTCATTctgttttcagaggaa
tttttcaatatcattacaggaactagcagtaagttttatgttctttgaat
atgttgttagggttttttggaccaatatagtttgatttcctaaagatcac
aaacaagcgaggggtccctttaaaggaagatcgaaattagagtttttcag
cattccaaaaaaaaaaacgcatagcagaaattttttcatcttcacaggat
cgattttcaacaacaaaatacatcttttggtcaacggatttttttctgat
gttCTTCCTTTGAGGAATATCGATACACTTTTGTTTTCCCCTTAAgtgcg
cgagaaaaaaattatgaagatACCAATAATAAAGATTTCCACCtcatttt
gcgcccacgataaaATGGTCCAAATATGGGGGTGTTACAAATGATAAACT
CTtattttgtaagtgtttattttctgagagatacaaatagtatattgaat
gtTATTAACTTATTTAATTAATGTATcccgagtttatcgttctacatctg
caatttgagcttaactaagctcatttgacatcaatcgatacttcgattat
cagctGGATCGAGAGAGAGTGATATACGAGTCAATGTAGAGAGTCTATcg
ccatatttccctaacaccctgcctgcCTTATTTaattaagtatttttgag
cccaaatttaaatatatatggctaaataaaaagcaaatgatggcagttct
gtttttggacctaccccggtggggtggaggtcctataaattaacccatgt
tcgttagttagtgtgttagttacaagcttttctcgagattggctcattag
ttttttctgatttttggcacaaaggtgcatgaccataaaccctcgaatgt
gacggagcccgattttcgaaaNtgatttttggcacaaaggtgcatgacca
taaaccctcaaatgtgacggagcccgatttttgaaaaaacaaatttgggg
gcaaatttgggccaaaaaatggcttaaaaacgggttttttggactttttg
aaaaattggatcattaattttttctgatttttagcatgaaagtagggtac
aatcatagttaaaggatggctcaagcagatctttgcaaaaaaattttttc
aaaaatcgcatttttatctataagaaccacttttaataagaatacatcaa
tgttcttagccatattattattattattatttttataagtttttttttta
tgaaaatgtcacggtggagggtaatgatttgagttttctgtaaacactta
ttatttttttggctgaaaaacgaatctttatctataagaatcactattta
tgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNttttattattattttttctaacaga
agaaaatgtcacggtagagtgcgacggtttgagttttctggaaaccttat
ttattaagctgtgcatttttctgatagtcgtttttataaagaaaagcact
taatagcttttttatttctttttcaaaaatctttttcaatattgttgata
gtttctctcaatagatatgctttcattttctttatttttttgtattttgg
ccagttatgtcttatgtgtttcattgtttcaatgttcactgattagtttg
ataaccaggtaggtccataaaagtatcgcttgttttcCTTAAACCttcgg
gaaaagtttttttaaaacgacttagctattttacaaatctgggaaaagaa
ctcccataggaattctgaTACCTAACctgattggttaattttggaATGGC
TTCAAGAAAGCCATAATGGCAGATcgatttaaaagtttctgatgaggaaa
taatgtgaaatttgttgatgttgatggcttgttgattctgtaaagagaag
agaaaacaggtatagctttttctgaCCAAGGAATATTGAAGGTCCAGCTG
CACtgtaattattcaacaggacatcctgACTAGCAAAAGACCTAtttgca
ttttttatttctaatttatGCCTATTTTTTGCTCATAATTTCAGACAAAA
AACATTCGGGGGTAATTGTAAAAGAATCACAGATTATTTTTATACTAAGA
AATTACGACCATTTCAGTCAGCCAAAGTCTGGAGTCATAGCCTACGTGGG
ATTACGACATTTGGGTAAAGGagcaaaagttgaaaaaaagctggtgtttt
gaagcgcttttGTACTTGAAATTTGAAAGGTTGTCATTGACTGAATAGCG
AAAAAACCATCAGAAAAGCTGGTCACTAAGTTTTTGCGCTGCGAGATTGG
AAGATAGAAGCAAACATCAACAAACACATCCAACATAAATCAAACTGATT
GAACTTTACAACTGGAAGTTCTTGGTTTGATGCTAAAAATTGCTCTGTTG
TCACTGCTGGGAAGCCTACAATTTTTTAGATGTTGCTTattgtaaacatt
tttttataacagTTTGTATACTTCTTTTTAGACGCTCCGTTTGTACGATG
TGACAAATAACCTTCAACGTCATTGCTTCAATGAGGGTGGTGCTGTATTG
GATTGTTGTTTTTCTGATACCACACACGGCTTCTGTGGTGGCCTTGAAAA
AGCTGTCAAATGGTAAGTTCTTTCAATCCTCTGAAGTTTACTGCTAATCG
ACACTCTCAAGCCCATTGTGCAAAAAGATAAAGCTACAatcatccactaa
atatttgagacaaaggggagttcccggtgaaattttgaacaccacaattg
atttttaagcgccttaaactatagttggaaagtagagttttaactctgag
ttttaacatgataCTTAAGActtacttaagaccttaggatctcaggattt
aaaagctcaaatttgctcgaatgaggcttggaatatagcctagaagccac
caaacccctctaaaatcgaaatattcaatagAAGAaggtggaagtgctaa
aatagcaattctcgcccgaactttaaattccgAAAAACGTTAagatacac
taaaatctcaatatatttcgagggtGATTGTAGGAAGCTGATAATAGGTT
GTCctccttttccttaaaaaagttTATGTCTATCTAGGGAACTTTTGTGG
cacttgatttttaaaaatcagttttacTTTCGAAATTGTATATGACTCGT
TCATTTCTTTTGTAGCTACGACTTCAACACATCAGAAGTACAAGTTCTGG
GATATCACACAGCACCTATTAAATGTTTGGAACACTGTCCTAAAACTggt
aaaactttgtttttattcagAAAATAGTCCGCTGAACATCACTGATGTTT
GAAAGTTTAGGGTTTGAGCTAGTTAATTGAGCTGGGTGTTGCTATtatta
tgaaataattttgatgcttgctgtgatttttttataattatcaATTCAAA
TCCCAGCAATTATCTTTTATCAATTAACTTCAATAATTTCcctttgggtt
ttttttttattacggCTACAATTAGTGAGAATGTTTCATTTTAACACCTA
TTTGTGTATAAAAGTGCGACTAACAATGGAAATAACATTTCAACTTTCAA
GTGTTACCGTTTCAGAtggttttttaaacttttgaagtaTTGATAATATG
AAAGTATGATTTATACTTCTCTCTCCTTTTTGGCCCTACTTGCGTCTGGT
tggctcaaaataaaaaagtaaattttttctctcaGGTTTACTAATTACTG
GCAGTTGGGATCAGACCATCAAATTATGGGATCCAAGGGAAAAGCAATGC
GTTGGAACTCATGAACAAAATGAAAGGGTATGTCACGTTCTCTTCTTTAT
TACTACACATAGCAATTTGAAGTATTATAGTTTAACATACAAACTGCACT
TCTCTTTACAACCACATGAAAAGTTTGTAATAAGAAACAttcgtttttca
ctttttttaaacctttattcTTCTAACTATAGGTGTATACCATGGCAATA
TCTGGTGACAGAGTTGTGGTTGGCACTGTAAGCTTGTCTTTTCTTTATTC
TAAAAGTTCGGAAGGGAGATGTTGATGTGTTTAAGGAAATGGGAATACTA
TAACCCGTTGGAATGATTTCCTAAAGCTAGCCAATTTGCATTGCAGCCAT
GTTGTAAATTTAGTTGCAAtgattgtatttttataaaacttcTTAGATAA
GATTGCCATTATTTGTTACGTTATCACCATGATTTCAGAGCGTCTTTAAT
GAAGAACTTTAAAGAACGTTTATACGTCATGGAAAATCAAACTGTGCATA
CATGTTTTCCATCTTCTGTGCTAGAGTAAAACGCTCAGAAGTCTCGAATA
TATGCTACACCATTGAAATTTTGTGCTATTGTTATTTACTATGATTACTT
TATACTCAACTCTGAACTTCTAATCGCCAATTGTCTTTAATACTTTCTGC
ATTTTTTCACTTTCAGGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAA
ACATGGTAAGAGTACTGAACTTTCTATTATACCCTCGAGAGGTAAAAtaa
gcggtgtaaatgcatcgagagcgctatatctacttttcctcgaatacttt
tgatcatgtagcgccgttagacgttaattatacggatatagcttggtcca
gggtgcAGAAAGGTCAATGTGTAAGAGGAAAGTGGTTTTCgagtttttta
tttaattgcaagGTTTTGATCGAAAGCAAGAGACACGGAAAACCTAAATT
TGTtcagaagaaaaatgattaagcattcaaaaagtaaaatatttttgttt
taaaagacCACAATTTACATTTTCGTTTATTGATTAGGGTGTTGTCGAAC
AACGACGCGAATcgagtttgaaatttcaaacGAGATGCATTAGAGCATTC
CCTAATAAACAAGGTAATTGTTTTAATTCATGAAATTCAGACTTTGACAA
AggcattttttccatttttaaattctttaaattcactGTTTGGTGGTATC
AGATTATCATGTCGTTAATAGTAATTACATGAAGCAACTAAGGTTATGTA
AGGGTCTTACAGCTAATTCTTTATGGAGTCAAAATGGCATCACGGCTAGA
AAAAggtatatttttaagaatttttaaagTACGCATGCGCTGTCCTCCTA
TATTGGAATCAATCGCTTTAAGAAGACCAGGCGGTAAATCAGAAACGAGC
CTGGATATATATTGGCTACTTTCAGTTATGTTTTGTCAAAATCCATTGGC
TTGCCATAAACCAATACTCCTTTAGGCGAAAAAAGACGATATATTGCAAA
ACTAATTACTCCATATTTCAGTGGATGCTAGTAAAACCAGCGGGAAATTA
AATATTGCCCATAAATAAGTTTCgttcaaatttttccatttttaaatttt
acagtTTAAAAGACTTCAAAAAATTAGAGCAAGAATTACCCGTTCCCTCA
GCTTTCACACGCTCCTACTTCATTGGGGTTTTTAAAATCTTGGACAAACC
TCAGAAATAGTCGAAAGCCTTGAAATTGGATAAGTATTGCAGTTTAAACT
GGTATCTTATTTTGAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAGTGG
CTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTATGCT
TTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCCTGT
AAATGCCATCAGCTTTCATAAAGGGTATGctttaaattctttttattcAG
CGGAAGAGTTTGCTTCATTATCATCAGTTTGCAAGGGCGGTCTCCGATTT
TAATCTAAGatttaaaaatgaataaaacttCTCAAATTCCGCAGCACCTC
TACAGTAGTGGTTTGTAACTGCACTCTCTAATTTGAGGTTCTTCTATTTG
ATACGTCCCAATCCCGCTAtgcgataatattgaaagtcatcgtcaacaag
aaactctcataaacgacttTCTACTTTCGTTCGTGACTTTTAACCAGTTT
TTCTGTCTTTTAGATACAACACGTTTGCAACGGGAGGATCTGACGGATTT
GTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGATTTGATACTGTCTT
CAACGTCAGATTCGATGTCAGCGACTGATTCATCAAGAAGCTCGCCATCG
TCTATTTCAGTGGTGCATTCGTCTTGAATAGATGCAACTGATGATGCAGA
GCTTTGACAATCTTCAAATGTATCGTTATCGTAATTTGCTTCTTCAGTTT
CCTGATGTTTCTCTCCCTTCAAAGATGGAACNttatttttcgttttttag
agAGAAAAACGTCACAcgcaaaataactcggaaaaataactcgaaaaaat
aaCTTAAGAATTCCAG

Coding sequence (CDS) from alignment at scaffold_404:51073..65638+

>TCONS_00063854 ID=TCONS_00063854|Name=TCONS_00063854|organism=Clytia hemisphaerica|type=CDS|length=8532bp|location=Sequence derived from alignment at scaffold_404:51073..65638+ (Clytia hemisphaerica)
CGCCATCCAGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTT
GATGGCGCgcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCGA
TCGAGAAGGCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAATT
TCTTCGATCAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATC
TTGGGATAGTACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTC
ATTGCTTCAATGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACC
ACACACGGCTTCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTT
CAACACATCAGAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAAT
GTTTGGAACACTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGAT
CAGACCATCAAATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCA
TGAACAAAATGAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTG
TGGTTGGCACTGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATG
GGTGTTGTCGAACAACGACGCGAATcgagtttgaaatttcaaacGAGATG
CATTAGAGCATTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAG
GGAGAGTGGCTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAG
AAGTATGCTTTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATAT
CTATCCTGTAAATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAA
CGGGAGGATCTGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAAC
GCCAGATTTGATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACG
CCATCCAGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGA
TGGCGCgcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCGATC
GAGAAGGCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAATTTC
TTCGATCAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTT
GGGATAGTACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTCAT
TGCTTCAATGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCAC
ACACGGCTTCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCA
ACACATCAGAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAATGT
TTGGAACACTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCA
GACCATCAAATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATG
AACAAAATGAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTG
GTTGGCACTGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGG
TGTTGTCGAACAACGACGCGAATcgagtttgaaatttcaaacGAGATGCA
TTAGAGCATTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGG
AGAGTGGCTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAA
GTATGCTTTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCT
ATCCTGTAAATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAACG
GGAGGATCTGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGC
CAGATTTGATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCC
ATCCAGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATG
GCGCgcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCGATCGA
GAAGGCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAATTTCTT
CGATCAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGG
GATAGTACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTCATTG
CTTCAATGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACAC
ACGGCTTCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAAC
ACATCAGAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAATGTTT
GGAACACTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGA
CCATCAAATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAA
CAAAATGAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGT
TGGCACTGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTG
TTGTCGAACAACGACGCGAATcgagtttgaaatttcaaacGAGATGCATT
AGAGCATTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAG
AGTGGCTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGT
ATGCTTTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTAT
CCTGTAAATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGG
AGGATCTGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCA
GATTTGATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCCAT
CCAGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATGGC
GCgcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCGATCGAGA
AGGCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAATTTCTTCG
ATCAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGGGA
TAGTACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTCATTGCT
TCAATGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACACAC
GGCTTCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAACAC
ATCAGAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAATGTTTGG
AACACTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGACC
ATCAAATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAACA
AAATGAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGTTG
GCACTGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTGTT
GTCGAACAACGACGCGAATcgagtttgaaatttcaaacGAGATGCATTAG
AGCATTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAG
TGGCTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTAT
GCTTTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCC
TGTAAATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGGAG
GATCTGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGA
TTTGATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCCATCC
AGAATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATGGCGC
gcgagaaaattttaaaatcaaaacaacaaaaaaagatgGCGATCGAGAAG
GCAAACGAAACGTGCTTGAAAAATTCACCAACAGATACAATTTCTTCGAT
CAAATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGGGATA
GTACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTCATTGCTTC
AATGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACACACGG
CTTCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAACACAT
CAGAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAATGTTTGGAA
CACTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGACCAT
CAAATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAACAAA
ATGAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGTTGGC
ACTGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTGTTGT
CGAACAACGACGCGAATcgagtttgaaatttcaaacGAGATGCATTAGAG
CATTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAGTG
GCTGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTATGC
TTTCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCCTG
TAAATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGGAGGA
TCTGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGATT
TGATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCCATCCAG
AATCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATGGCGCgc
gagaaaattttaaaatcaaaacaacaaaaaaagatgGCGATCGAGAAGGC
AAACGAAACGTGCTTGAAAAATTCACCAACAGATACAATTTCTTCGATCA
AATTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGGGATAGT
ACGCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTCATTGCTTCAA
TGAGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACACACGGCT
TCTGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAACACATCA
GAAGTACAAGTTCTGGGATATCACACAGCACCTATTAAATGTTTGGAACA
CTGTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGACCATCA
AATTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAACAAAAT
GAAAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGTTGGCAC
TGCTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTGTTGTCG
AACAACGACGCGAATcgagtttgaaatttcaaacGAGATGCATTAGAGCA
TTCCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAGTGGC
TGTTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTATGCTT
TCAAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCCTGTA
AATGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGGAGGATC
TGACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGATTTG
ATACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCCATCCAGAA
TCATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATGGCGCgcga
gaaaattttaaaatcaaaacaacaaaaaaagatgGCGATCGAGAAGGCAA
ACGAAACGTGCTTGAAAAATTCACCAACAGATACAATTTCTTCGATCAAA
TTTAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGGGATAGTAC
GCTCCGTTTGTACGATGTGACAAATAACCTTCAACGTCATTGCTTCAATG
AGGGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACACACGGCTTC
TGTGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAACACATCAGA
AGTACAAGTTCTGGGATATCACACAGCACCTATTAAATGTTTGGAACACT
GTCCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGACCATCAAA
TTATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAACAAAATGA
AAGGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGTTGGCACTG
CTGGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTGTTGTCGAA
CAACGACGCGAATcgagtttgaaatttcaaacGAGATGCATTAGAGCATT
CCCTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAGTGGCTG
TTGAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTATGCTTTC
AAATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCCTGTAAA
TGCCATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGGAGGATCTG
ACGGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGATTTGAT
ACTGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCCATCCAGAATC
ATGGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATGGCGCgcgaga
aaattttaaaatcaaaacaacaaaaaaagatgGCGATCGAGAAGGCAAAC
GAAACGTGCTTGAAAAATTCACCAACAGATACAATTTCTTCGATCAAATT
TAGTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGGGATAGTACGC
TCCGTTTGTACGATGTGACAAATAACCTTCAACGTCATTGCTTCAATGAG
GGTGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACACACGGCTTCTG
TGGTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAACACATCAGAAG
TACAAGTTCTGGGATATCACACAGCACCTATTAAATGTTTGGAACACTGT
CCTAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGACCATCAAATT
ATGGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAACAAAATGAAA
GGGTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGTTGGCACTGCT
GGTCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTGTTGTCGAACA
ACGACGCGAATcgagtttgaaatttcaaacGAGATGCATTAGAGCATTCC
CTAATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAGTGGCTGTT
GAATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTATGCTTTCAA
ATGCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCCTGTAAATG
CCATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGGAGGATCTGAC
GGATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGATTTGATAC
TGTCTTCAACGTCAGATTCGATGTCAGCGACTGACGCCATCCAGAATCAT
GGCATGTTCCGCTTATAGCGCTCACTTGTATCTTGATGGCGCgcgagaaa
attttaaaatcaaaacaacaaaaaaagatgGCGATCGAGAAGGCAAACGA
AACGTGCTTGAAAAATTCACCAACAGATACAATTTCTTCGATCAAATTTA
GTCCTGCTACATCAAACTTCTTACTTGCAGCATCTTGGGATAGTACGCTC
CGTTTGTACGATGTGACAAATAACCTTCAACGTCATTGCTTCAATGAGGG
TGGTGCTGTATTGGATTGTTGTTTTTCTGATACCACACACGGCTTCTGTG
GTGGCCTTGAAAAAGCTGTCAAATGCTACGACTTCAACACATCAGAAGTA
CAAGTTCTGGGATATCACACAGCACCTATTAAATGTTTGGAACACTGTCC
TAAAACTgGTTTACTAATTACTGGCAGTTGGGATCAGACCATCAAATTAT
GGGATCCAAGGGAAAAGCAATGCGTTGGAACTCATGAACAAAATGAAAGG
GTGTATACCATGGCAATATCTGGTGACAGAGTTGTGGTTGGCACTGCTGG
TCGAAAAGTGATGGTTTGGGACTTGAGAAACATGGGTGTTGTCGAACAAC
GACGCGAATcgagtttgaaatttcaaacGAGATGCATTAGAGCATTCCCT
AATAAACAAGGTTATGTGTTGAGTTCAATTGAAGGGAGAGTGGCTGTTGA
ATATTTCGATCCAAGTGTTGAGATTCAGAAGAAGAAGTATGCTTTCAAAT
GCCACCGCGTCAAAACTGAAGGTGTCGAGTATATCTATCCTGTAAATGCC
ATCAGCTTTCATAAAGGATACAACACGTTTGCAACGGGAGGATCTGACGG
ATTTGTTAACGTTTGGGATGGTTTNGAAGAAAACGCCAGATTTGATACTG
TCTTCAACGTCAGATTCGATGTCAGCGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040038XLOC_040038Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063854-exon-scaffold_404-1491911889:51073..51283TCONS_00063854-exon-scaffold_404-1491911889:51073..51283Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:51073..51283TCONS_00063854-exon-scaffold_404-1510915933:51073..51283Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:51073..51283TCONS_00063854-exon-scaffold_404-1575043694:51073..51283Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:61804..61934TCONS_00063854-exon-scaffold_404-1491911889:61804..61934Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:61804..61934TCONS_00063854-exon-scaffold_404-1510915933:61804..61934Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:61804..61934TCONS_00063854-exon-scaffold_404-1575043694:61804..61934Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:62488..62570TCONS_00063854-exon-scaffold_404-1491911889:62488..62570Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:62488..62570TCONS_00063854-exon-scaffold_404-1510915933:62488..62570Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:62488..62570TCONS_00063854-exon-scaffold_404-1575043694:62488..62570Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:63008..63099TCONS_00063854-exon-scaffold_404-1491911889:63008..63099Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:63008..63099TCONS_00063854-exon-scaffold_404-1510915933:63008..63099Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:63008..63099TCONS_00063854-exon-scaffold_404-1575043694:63008..63099Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:63255..63299TCONS_00063854-exon-scaffold_404-1491911889:63255..63299Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:63255..63299TCONS_00063854-exon-scaffold_404-1510915933:63255..63299Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:63255..63299TCONS_00063854-exon-scaffold_404-1575043694:63255..63299Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:63739..63777TCONS_00063854-exon-scaffold_404-1491911889:63739..63777Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:63739..63777TCONS_00063854-exon-scaffold_404-1510915933:63739..63777Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:63739..63777TCONS_00063854-exon-scaffold_404-1575043694:63739..63777Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:64110..64185TCONS_00063854-exon-scaffold_404-1491911889:64110..64185Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:64110..64185TCONS_00063854-exon-scaffold_404-1510915933:64110..64185Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:64110..64185TCONS_00063854-exon-scaffold_404-1575043694:64110..64185Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:64840..64996TCONS_00063854-exon-scaffold_404-1491911889:64840..64996Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:64840..64996TCONS_00063854-exon-scaffold_404-1510915933:64840..64996Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:64840..64996TCONS_00063854-exon-scaffold_404-1575043694:64840..64996Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1491911889:65286..65638TCONS_00063854-exon-scaffold_404-1491911889:65286..65638Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1510915933:65286..65638TCONS_00063854-exon-scaffold_404-1510915933:65286..65638Clytia hemisphaericaexon
TCONS_00063854-exon-scaffold_404-1575043694:65286..65638TCONS_00063854-exon-scaffold_404-1575043694:65286..65638Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063854-proteinTCONS_00063854-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:51073..65638 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.5752	64.3818	97.3426	100.46	52.9793	44.1454	39.4556	42.4393	46.801	48.7313	55.4959	50.7591	42.3168	46.2765	42.639	51.3068	47.873	50.0184	19.4348	17.755	36.5465	34.0784	48.1232	40.8393	54.9942	55.3726	23.1297	18.4206	27.2985	26.5002
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00063854 vs. Swiss-Prot (Human)
Match: BUB3 (Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 1.854e-128
Identity = 170/259 (65.64%), Postives = 207/259 (79.92%), Query Frame = 2 
Query:  110 ANETCLKNSPTDTISSIKFSPATSNFLLAASWDSTLRLYDVTNNLQRHCFNEGGAVLDCCFSDTTHGFCGGLEKAVKCYDFNTSEVQVLGYHTAPIKCLEHCPKTGLLITGSWDQTIKLWDPREKQCVGTHEQNERVYTMAISGDRVVVGTAGRKVMVWDLRNMGVVEQRRESSLKFQTRCIRAFPNKQGYVLSSIEGRVAVEYFDPSVEIQKKKYAFKCHRVKTEGVEYIYPVNAISFHKGYNTFATGGSDGFVNVWD 886
            +NE  L   P D ISS+KFSP TS FLL +SWD+++RLYDV  N  R  +   GAVLDC F D TH + GGL+  +K +D NT +  ++G H API+C+E+CP+  +++TGSWDQT+KLWDPR     GT  Q E+VYT+++SGDR++VGTAGR+V+VWDLRNMG V+QRRESSLK+QTRCIRAFPNKQGYVLSSIEGRVAVEY DPS E+QKKKYAFKCHR+K   +E IYPVNAISFH  +NTFATGGSDGFVN+WD
Sbjct:    4 SNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWD 262
The following BLAST results are available for this feature:
BLAST of TCONS_00063854 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BUB31.854e-12865.64Mitotic checkpoint protein BUB3 OS=Homo sapiens GN... [more]
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