TCONS_00063854-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063854-protein
Unique NameTCONS_00063854-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063854-protein ID=TCONS_00063854-protein|Name=TCONS_00063854-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
RHPESWHVPLIALTCILMAREKILKSKQQKKMAIEKANETCLKNSPTDTI
SSIKFSPATSNFLLAASWDSTLRLYDVTNNLQRHCFNEGGAVLDCCFSDT
THGFCGGLEKAVKCYDFNTSEVQVLGYHTAPIKCLEHCPKTGLLITGSWD
QTIKLWDPREKQCVGTHEQNERVYTMAISGDRVVVGTAGRKVMVWDLRNM
GVVEQRRESSLKFQTRCIRAFPNKQGYVLSSIEGRVAVEYFDPSVEIQKK
KYAFKCHRVKTEGVEYIYPVNAISFHKGYNTFATGGSDGFVNVWDGXEEN
ARFDTVFNVRFDVSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040038XLOC_040038Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063854TCONS_00063854Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 282..296
score: 34.27
coord: 144..158
score: 43.42
coord: 63..77
score: 33.24
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 247..295
e-value: 0.0024
score: 27.1
coord: 118..157
e-value: 1.5E-6
score: 37.7
coord: 78..116
e-value: 9.5
score: 10.8
coord: 38..76
e-value: 0.0017
score: 27.6
coord: 160..196
e-value: 1.1
score: 16.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 254..295
e-value: 0.0048
score: 17.6
coord: 50..76
e-value: 0.16
score: 12.8
coord: 123..157
e-value: 6.5E-5
score: 23.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 43..79
score: 8.604
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 270..295
score: 9.773
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 125..166
score: 12.346
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 21..305
e-value: 1.6E-56
score: 191.2
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 125..205
score: 12.473
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 44..296

Blast
[Close]
BLAST of TCONS_00063854-protein vs. Swiss-Prot (Human)
Match: BUB3 (Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 1.554e-131
Identity = 170/259 (65.64%), Postives = 207/259 (79.92%), Query Frame = 0 
Query:   37 ANETCLKNSPTDTISSIKFSPATSNFLLAASWDSTLRLYDVTNNLQRHCFNEGGAVLDCCFSDTTHGFCGGLEKAVKCYDFNTSEVQVLGYHTAPIKCLEHCPKTGLLITGSWDQTIKLWDPREKQCVGTHEQNERVYTMAISGDRVVVGTAGRKVMVWDLRNMGVVEQRRESSLKFQTRCIRAFPNKQGYVLSSIEGRVAVEYFDPSVEIQKKKYAFKCHRVKTEGVEYIYPVNAISFHKGYNTFATGGSDGFVNVWD 295
            +NE  L   P D ISS+KFSP TS FLL +SWD+++RLYDV  N  R  +   GAVLDC F D TH + GGL+  +K +D NT +  ++G H API+C+E+CP+  +++TGSWDQT+KLWDPR     GT  Q E+VYT+++SGDR++VGTAGR+V+VWDLRNMG V+QRRESSLK+QTRCIRAFPNKQGYVLSSIEGRVAVEY DPS E+QKKKYAFKCHR+K   +E IYPVNAISFH  +NTFATGGSDGFVN+WD
Sbjct:    4 SNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAISFHNIHNTFATGGSDGFVNIWD 262
The following BLAST results are available for this feature:
BLAST of TCONS_00063854-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BUB31.554e-13165.64Mitotic checkpoint protein BUB3 OS=Homo sapiens GN... [more]
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