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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062758 ID=TCONS_00062758|Name=TCONS_00062758|organism=Clytia hemisphaerica|type=transcript|length=2373bp ATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGGatatttat CAAAATGGAAGAGAAacctaaaatgaaaacattgggAGACGAGGCACCTT CTAAAGTGACACCAATGTCAGTCCTTGGACAAGATAAAGCATCTACATCA TCTTTAAGGAATCCTGGCATGTCATCAAATCAATCTTTGGTTATGCAACT TCAGCACGCAACACAAATGTCCAATATCACTGGAACTGCAACAACAGCGA CTTCATCATCAACACAACCAGGGGCCACTGATacacaacaacagcaacaa caacagcaaacAAATACTGCCACACCTTTGACAGAGTACACTATGTACCA CCATTTACCATCTACAGTCATGAACCAACAAAATAATACAGATGATGGAG ATGGTGCTGGTTCATACGATGACAGCCCACGTGAAATGAGAGAACAAGAA TTAAGGGAACAAGACCGTTTTCTACCCATCGCCAATGTGGCTCGAATTAT GAAACGTGGTGTCCCTGAGACAGGAAAGATTGCAAAAGATGCCAAGGAGT GTGTTCAAGAATGTGTATCAGAGTTCATCAGTTTCATCACTAGCGAAGCA AGCGAACGATGTCAAcaagaaaaacgaaaaacaatTAATGGAGAAGACAT CTTGTTTGCAATGACAACCCTAGGTTTCGATAATTACGTTGAGCCTTTGA AAGTTTACTTGACCAAATATCGAGAGAGTTTGAAAGGCGAGAAAGTTTTG AACGTTGCGGAATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGG ATTATCGGCTATACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCA TGGTTTCTGCTGATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATT AATCAAGTCAATTCACAGATTCAATTCAACACGTGACAAGAAAAATCTAT GAACATGTAAATTTGGATCAATCACAGAGAAGCTACCAGTTTGGGGATAT TTGCAGTGAAGTTGCCACAAGGGGGTTGTTGTGTTTGATATGGATGGAGG ATGGGATGGTTAACGTGTCAAAGCTTTACAACAAAAGCTAGTTTTAAGCA AGACTCGATTATCATCATAACAACTTTAATGTCTTCAGGCCCAAAAACAA TCTGTTGTGTGTCCAATTGTCAACTTGACGTATGTCGGACATTTTTAGAA GGAAGTTAGTCCACCTAAAATATAGTATAGATCTTTGCGTCGCCTGGCAG AATCGCCCAAGTAACAAATATTTATGCCCCCATAGATATTTCTAGGTTTT TCTCGGACGCTCCGGATTTTTTAAACATCTCAAGATCCATATAGAATACA AATCAAAAGGTTCAAGCTGTCCGCAGTAATTTACATGCCCACCTATTTTG CGTTATTATTTTGCCACGTAAATGTGagcaaatttatttatttttaaact taTTCATCGtttttagatgttttttttttgtaaataatcaAACTACAACG TACCTTACTTTAATAGTTAGAAGTGAAATACAGTTTATCAGTTAAATTCT AAGTGACTAACGTTTCTAACGTCGTTTTGCATAATATTCCACTTCCCGCT CTAAGATTCTCCTGACTTTCCGGGATTTTTCCGCTATTTTACCCACGAGA ACCGACGTGAGATTGGAAAcggttttttaaaaatcttttgttcaCTTTTG AAACTGtctaactttccgaagctcatttttcaactacccagagtcctggt ctttttccgctagaaaagttGAATCTTATGCCAAATGACGGTAATAATAT GATCTGTTATATTTTGTTTGGCTCAATTACTGTACTAGTTCAGGCATTTC ACAACTTTAGAACAATCACAATgatcaaaatttcgaaagaaAGAGAACAA AGCCAAAGGTTTCTTACAgtgtaaaaatatatatattgcaaataatttca aaaaaataactaTTATAATTcaatataattaaaaaaaaaactattttaca TGTTACATTTAGATTTTCTCACAATCGTTGTTTTTGAAATTGGCTAGGtc aactgaaatattttaaagCTTTAGCGGTCTTGTCTAAAATAAAGTCGGTA CGATCTCAACAATTGTAATTTTCGGGTACTACTTTTGTCGGGTTGCACGA AAGCGACGTTTATGTAAGTTTCCATTTGGGATCCCTGTTTAACATCTTCC AAATCCTTGCttcttcaaacaaaagaaaagaggcCTTGTTCTTCCCCTCC AAATTCTTCGTCCTGCAAAACTGTTTGAATACGCATTCGCTGTTCCACTT TTTGATAGAGTTCAAATGATATTTCTTCTTCGGAAAGAAAGCTCAAAATT CCTTTGGCGCCCTGTAAATGGCA Run BLAST on NCBI protein sequence of TCONS_00062758-protein >TCONS_00062758-protein ID=TCONS_00062758-protein|Name=TCONS_00062758-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
INLVDESEWLSRLWIFIKMEEKPKMKTLGDEAPSKVTPMSVLGQDKASTS SLRNPGMSSNQSLVMQLQHATQMSNITGTATTATSSSTQPGATDTQQQQQ QQQTNTATPLTEYTMYHHLPSTVMNQQNNTDDGDGAGSYDDSPREMREQE LREQDRFLPIANVARIMKRGVPETGKIAKDAKECVQECVSEFISFITSEA SERCQQEKRKTINGEDILFAMTTLGFDNYVEPLKVYLTKYRESLKGEKVL NVAEYAHHVDSEEQASGLSAIQYQIAGSNLHPSMVSADGTPYAAYTQAQI NQVNSQIQFNT Run BLAST on NCBI transcript from alignment at scaffold_371:551935..560432- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062758 ID=TCONS_00062758|Name=TCONS_00062758|organism=Clytia hemisphaerica|type=transcript|length=8498bp|location=Sequence derived from alignment at scaffold_371:551935..560432- (Clytia hemisphaerica) ATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGGGTAAATTT
AAATTCTTTTTTATGATTTCTCGGAAATAATAAACAAGCACATGTTAAAC
ACATGTTTACTTCATTGCCTAACCCTGAACAAGTTCACCCCATTAGTTCA
ATCCATCTCTGACATGTCTTTCTCATGACTGATGACCTGCAGAAATCCAA
ACCTCTTCTCCCCAAAACAGCAGAGACTGCTATAAGACTGCTAAGGTCTA
TTCAGGGTGTTCAGCACTTACATACTTTTTCACCCAACGTTAATTTGGTG
GTGGGAAACTGAAACCCAATTTCAAATTGATGGTACAAAATTTTGAAGAA
AAATCAACTCAAGTAGATGTTTTGGGCTATTCCAAAATGATATATATACA
AGAGTATTGGCAAACTTTTTTCACCTGCCCTCCCCCTGAAATTTTGAATG
ACAAATTATCCCGCCTTGAAATCTAGGATATACCATGAAGTCGGGTAACT
TGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAATGACCTGTCTG
GTCCTTAAAATACAAAGTTAAATCTAAAGAAAAATGGTAGAGTAAAGCTG
GAAGCGAAACTGCGTAGTTCTTGTTGTTTTGAAATTTTGCTGCTTTGATT
GGTTAGTCATTTGAGGGCTATGCATCATGTGAACCTCCACTGATGCAAGT
TACCCAACTTCATGGTAGTATCCTGTCAGTCCTGTGGAAGTTGAAATTTT
GTGAAAAAGGGGCTGGAAAACAACTATTGATGTCATTTTATGAAGAGGGC
TCTCTAGAGAGAAAGCCCTGAGAAATTGCTGAGATATCATATTATTTCCA
TGAATTATACACACATAGAAAAATATTGAACCCCCCTCCCCCTTAAAAAA
AAAAAAAGGAAAAAAGTTTTGATTAGTAACTGGGCATAAAATGACCAATC
AGACACGATTGCATATGCATACGAGTGATATAGGTTCACGTTCTGGAAAT
CCAGCTTAAACAATGGCAGGCGAAATTTGAAATAACAGCATTGAAACTCA
ACTTTTAAGAATTTTTTTTGTTGTATTACCATAGGCTGTTCCAGATAATT
TTTCAAGCAGAACAAGTTAACTTTTTTCAAAATGAAAAGATATTTTCACC
CAGCCAAAAATCAGATGACAGAACAGACTAGAAATGTAGATGTTGTTAGA
AAAATGCAATGCCATTTTGTGTATAATAATTTTTAAAAATTCCAATGCCT
CAAGGAGGCCTCCACAAGCGCTTTTCGGGATGACGTGATAGGGACTTTTT
GCAGCGTGATTATGTGATTTAGAAATTTTTTCTTTGTGATTGCGTGATGA
GAGGTCAAAACGTGTGATTTGAAAGATTTTAAGCTGCGTGATACGTGAAT
TGGACTTTTTCAAAGGGATGCATGATTGTCCAATTTTCTTTTGCTGATTT
GCCTGTTTGTGATTGCCTGAGGTTAAATAATTGTGTGATATCGTGATCAG
AGTTACCGCTGGGGAGCCTCCTCAAGCATCAATGATAAAAATACTTAGTA
TGTTCATTCACTAGTTACGATTCTGGGTGTTATTGTGTGATTCTGGAGTT
TATTACTCAACATGACATCCTATGAAAGCTCTATTGGTCAAGCTCTATTG
GTCAAGCTCAGTATTTAGTTTGAAGTACAGTTTTTATGGGAGGGGGTGTT
AAGATAGGCAAAAAATGTCCAGGATTCATTTTATACAAACTATAGGGCCA
AATCAAAAAACAATGAAACTTGTTGAGGAATAATTTTGTCAGTTGACCAA
AAAAATTAAAAAAATTTTGTCATTTTTAAGGCGATTTATGGGATTTACCA
AAGTTTCTTCTTTATAAAAAGTTCTCCAATTTCATTGTTTTGTTTTAAAC
CTCATTAATATTAGATCAATTTTTCAAAGATATTTATCAAAATGGAAGAG
AAACCTAAAATGAAAACATTGGGAGACGAGGCACCTTCTAAAGTGACACC
AATGTCAGTCCTTGGACAAGATAAAGCATCTACATCATCTTTAAGGAATC
CTGGCATGTCATCAAATCAATCTTTGGTTATGCAACTTCAGCACGCAACA
CAAATGTCCAATATCACTGGAACTGCAACAACAGCGACTTGTATGTTTTT
TAATTTTCTTTTTTTTTATCTTACTTGACAACCAAAATTAAAAATTAAAT
TAAATTTAAGTTAAGTTTTCTAACCTATAATTTCAAAATGATATATACAA
TCTATCTCTTTTTACTTTGAATTTCTAAAGAAAGAAATTTGGATAAAACT
CAATTTTGTGCCTGTAATATTTCTCATTTTTGACCAGCATCATCAACACA
ACCAGGGGCCACTGATACACAACAACAGCAACAACAACAGCAAACAAATA
CTGCCACACCTTTGACAGAGTACACTATGTACCACCATTTACCATCTACA
GTCATGAACCAACAAAATAATACAGGTATATATTGCAAAGGTTATACAGA
GCTTTTTTTCCTGTGTTTTGTTAGTTCTTTGGTAAATATTCTGTTTTTTT
TCTATTAGGAGAAATGAAGAAAGTTTTAACTCAGAATGTTTTAGTAATTC
AAAGTTATTCAGCTTATTAATAATTAAGTTTAACAGCTATTCTCACTGTC
AGAGTTTTGGCAGTGATTTATTTACTTTTGATTTTAAAAAGGCTCTTTCT
ATAGTCTATGTTTAAAAAAAATGTTCCAAAATAAGAAGTTTAGACAGATT
TGTCATGTTCAAAAGAGTAATTTTTTTTCCACCTGTAGATGATGGAGATG
GTGCTGGTTCATACGATGACAGCCCACGTGAAATGAGAGAACAAGAATTA
AGGGAACAAGACCGTTTTCTACCCATCGCCAATGTGGCTCGAATTATGAA
ACGTGGTGTCCCTGAGACAGGAAAGGTTTGTTGCTAAAGTAATAACAGTT
ATACAGTATGTTTGGGCATTTCTCTTTTTTTTTGGATTTTAGAAGGGTGT
TTATACAGTACATTTATAAGTTATACAGTATGCTCATTTTACTTTATAAC
CATTCGGGTCGAGGCTTATTAGTTTTTTCAAAACATTGTCAGTTTTGGCT
GATTTTCATTCTCATTTCTATTTTTTCTCTCTGATTGTTGATATTCTTAC
ATTATGGTTGAATGTGTATAAGTTAAAATATTCGTTTTCTTCTTCCCTGT
TTCATTGATCCCATTTTCAAAACAAAATTTTAATGATGAAAATTCTCAGT
AATAATACTTTGTTTATAAACGTTATTCTTATAAAAAAGAGAAAAAAATT
TTTCGGAAAAATAAGCATATCACAAACATAATTTGAGCTTGATTCCAAAA
TTTAGCTAGGCATAACTGAATATGTTTTCCAAAAAAAATATGCTGATAAA
ACGAACATTTCTTTTGGAAAAAGGGCTTTAGTTTAAACTACAATTTGTGA
TTTTTGTTTGTTACTTGTTACTCAACGTCAATAATACAATCATTTTAAAG
AGGTGTCAAATAACTGGGAAGTTTTTCTGAAGTCATTTTATTCACACATA
CTCAGTTTTTCTGACGTCGTTTAGGGGCTACTTAAAAGACTACACAATAA
ACTGACGAACAATATTTGACAATATTGTTTTCGGACCGTAATGTACAAAG
TAAATAACAGGTGCTCTTTTATAAAAAGGAATTTTCTTTCTGTGAATAAT
CCCCCTATATTGAAGGAAAATTGCAAATCAAGCTGACAATGTATTGCGGA
CACCTTTTCAATATATTGCCGGCACTCAGCAGTATATCATCAATATATTG
CCTGACAATATATTGTGTAGTGTATGTAGCCCTTTAGAACAAAGTCCTTT
GACGTTAGTGTCAGGCTTTATAGGTGTAATGTTCAGTCACATTTAAAAAT
TTTATCACCCAATGCTGTCAGTCTGATCAAAAAGCTAACAACTAATCTTC
TTTTCGATACTTTTTAGATTGCAAAAGATGCCAAGGAGTGTGTTCAAGAA
TGTGTATCAGAGTTCATCAGTTTCATCACTAGCGAGTAAGTATCCTTTTC
CTCTTATGTTTGAAAGAGTATAGCATAAATTCATAATAAATAATTTCATA
GTTCGAAAGGGGGCACTACCTCCCCTACCCTAGGGGTTCTATCCCCTTTT
AATATGTGGTGCTACCCCCCCCCCCCCTCAAATTTGGTGTACCGGGTGTG
TCAAAAAAAACGCGCCTATTTTTCGATTTTTGGCGTACAAATTTCTATTG
GACAAAGACAAATGAAATTTTTAGGGAAGATTTAAAATTTTATTTTTTAC
CCTTGGTGGAAATTATACATTTGTATGTTCATTTAAAGTGACTTTATGAT
AATTCCGCTGACTTAGGTCAATTTTTCATTTTCATAGTTAAATTTTCCCT
TATGGAACAAGGTACTAAACTATGCTTCGTTTTTACGCTCTTATTTTGTC
TCGCTACTACTCGCTACGGGCATCATTTTTTCATTTCATAGGTTAAGTTT
TGTTCCAAGGTCAATATTTGATAGATTCTAGCTAGTTCCAACCAAGCCAT
TTTTTAACGTCAATTGCGACGACAAAAAAATACTTTCAAATCGTCAATGG
TGCAGAAATGAACCGATGTTATTACCTTTTGTACATCAAAATCCTTAGGT
TTTCAGTTCAACTGTTTTGCAGAATGTTAAAGAAGCAGAACAGAGCTTGT
ATAATATAAATATGATCGATTAAATAATGGAAATGTAACAAATTGATGAA
AATTTGTTTTGCTAAGAAATGCTTTACATTGCCTTGAACACCTTGAGATG
TTACGATAACACTGCGAAAAGCTTCCCAAAACCCCTTTAATTTGAAAACA
AGATAAGTTTGACATTAAAAATGTTTGGTTTAGTAGGAATATTCCCTTCT
ACATCTAGCTTAAACTTCAATTTCACTTTAAAACGGTTTTTACAGCTGAT
AGGAAAGCTAGAATGTAAAGGTTTGACGTCTTCTTTGACGCCAATTAATT
GCTACTGTAAACAACACAAAAAGTAGTGATCTTGCGAGAATATTCATAAC
TTTAAATTCATTTGAGGTAACTCTGCCAAAATTTTAGAAATGTTTGGAAT
TAGAATGTACAATACTCACAAAAAAATTCAAGCAGTTCAACTAAATAGAA
AAATGTACGTCAAAGATTGTAAAATAGGGGCGTTTTTTTTTGACACACCC
GGTATAACAAAGAAAGAAGATATTGCATTGTAAATAAAAAATCAAACTTC
TAATTTGGGACAATTTGATACAAAAAAGCACCAACGCAGCTCAACCCTCC
TTCTAAATGAACCCCCCCCCTATTTGAAAGCCGGGTACGAACAATGTATT
TCTTTTATGTATAAAAAAGATGGTAGATTACTTCAAAAATTTGGAAAACT
ACAGTCAATTAAGAAGACCTTGTACTATCAAATTACNAGCGATTCCAAAA
AATCGAACAAAATTCCCCCTACTACTTGTACTATCAAATAGAAATCTAGT
GGTGATTCCTGGGAAGATTTTCCAGTACCTTAAAGGAAGAAATTTTGGCG
GGAATTTAATTTGGCGAATGGCCGAAAAAGTTTTTTAGAGGGAATTTAAT
TTGGCGGATGGACGAAAAAACTAAATTTGGCGGGAATTTAATTTGGCGTT
TGCTGAAAAGTTTATTCTTAAACAGCTACAAAAAAATGCAAAAACTCCTT
AAAAGAGCATATTTTCAAAAAATTAAAAAAAAAGAAATTTTGGCGGGAAC
TTAATTTGGCGGATTCTTGCCAAATCCGCCAAATTTTCTTTCCGCCAAAA
TTTCTTCCTTTAAGGTAGATCGGTGCCAAAATAGGCTGCTACATCGGGAA
CAATAATCTTTCAAAGGTCTATTGAGACCCATTATCTACACATTTGGCTA
TGAAATAAATTTTTACAAAAAATAAAAAGATACTAAATCTTCAAAAAGTC
CTCAAAATAATTCCTTAATTTTTTTGACTTTTCACAACCTAGAGCAAGCG
AACGATGTCAACAAGAAAAACGAAAAACAATTAATGGAGAAGACATCTTG
TTTGCAATGACAACCCTAGGTTTCGATAATTACGTTGAGCCTTTGAAAGT
TTACTTGACCAAATATCGAGAGGTTTGTCTTTTTAATTTTTAAAGTTTTT
TTTCATTCCAAAAGACACCAAAATCAGATTCTTACGTTTTACTTCTTATT
TCTACGTTACGTTACTAACTTCACTTATCATCCGGTCTAAAAACATGTTG
TCTAAAGTATTCGTAGCTTTTTACTAAGTTGATGAAATACAAGATTTAAC
TAATATTTCTTTTCTCAAAAAGTGCTATCATTTCAGATTGTGCTATATAC
TCGAATTTACAGTTTCCCTCTTCCTCTGTAAGGTTAGCGAGCTCTCAAAT
TAAGGGTATTCTCAGCAATCTTAGCTAAATTCTTATGTTTTTTTTATGTT
CTTATTTTAAATTTTACCAGAGTTTGAAAGGCGAGAAAGTTTTGAACGTT
GCGGAATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGGATTATC
GGCTATACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCATGGTTT
CTGCTGATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATTAATCAA
GTCAATTCACAGGTAAGAATCCCGGATGATTTGATGTTTCATTTCAACTT
ACTCTTGTGTGCTTANCCCCCCTGCTTATTCCCCCCCCCCCCCCCCCCTA
CAATTAAGCACACAAGAGTAGTATTTCTAACACTCAAGGTTTGAAAATTA
TAAAATAATCCTCTTTTGCCTATGCCATAAAGTTAAAGATAAAAAAACCC
CGATCCATACAAGGAACATACGTGAGTAGATTTAGCCAAACCCAACCTTT
TTCGACAAGCTGAGAATTGCAGGTTGAAGTAATGAAACTGCTGTTGTACT
TTTCAGGAAAATTTTGGAAAAATGAAAGAAACCGTTGATATATTATTTTG
TAACAAAACGTGTACGAAATTCTTATATAAATTTTGTTTCCAGATTCAAT
TCAACACGTGACAAGAAAAATCTATGAACATGTAAATTTGGATCAATCAC
AGAGAAGCTACCAGTTTGGGGATATTTGCAGTGAAGTTGCCACAAGGGGG
TTGTTGTGTTTGATATGGATGGAGGATGGGATGGTTAACGTGTCAAAGCT
TTACAACAAAAGCTAGTTTTAAGCAAGACTCGATTATCATCATAACAACT
TTAATGTCTTCAGGCCCAAAAACAATCTGTTGTGTGTCCAATTGTCAACT
TGACGTATGTCGGACATTTTTAGAAGGAAGTTAGTCCACCTAAAATATAG
TATAGATCTTTGCGTCGCCTGGCAGAATCGCCCAAGTAACAAATATTTAT
GCCCCCATAGATATTTCTAGGTTTTTCTCGGACGCTCCGGATTTTTTAAA
CATCTCAAGATCCATATAGAATACAAATCAAAAGGTTCAAGCTGTCCGCA
GTAATTTACATGCCCACCTATTTTGCGTTATTATTTTGCCACGTAAATGT
GAGCAAATTTATTTATTTTTAAACTTATTCATCGTTTTTAGATGTTTTTT
TTTTGTAAATAATCAAACTACAACGTACCTTACTTTAATAGTTAGAAGTG
AAATACAGTTTATCAGTTAAATTCTAAGTGACTAACGTTTCTAACGTCGT
TTTGCATAATATTCCACTTCCCGCTCTAAGATTCTCCTGACTTTCCGGGA
TTTTTCCGCTATTTTACCCACGAGAACCGACGTGAGATTGGAAACGGTTT
TTTAAAAATCTTTTGTTCACTTTTGAAACTGTCTAACTTTCCGAAGCTCA
TTTTTCAACTACCCAGAGTCCTGGTCTTTTTCCGCTAGAAAAGTTGAATC
TTATGCCAAATGACGGTAATAATATGATCTGTTATATTTTGTTTGGCTCA
ATTACTGTACTAGTTCAGGCATTTCACAACTTTAGAACAATCACAATGAT
CAAAATTTCGAAAGAAAGAGAACAAAGCCAAAGGTTTCTTACAGTGTAAA
AATATATATATTGCAAATAATTTCAAAAAAATAACTATTATAATTCAATA
TAATTAAAAAAAAAACTATTTTACATGTTACATTTAGATTTTCTCACAAT
CGTTGTTTTTGAAATTGGCTAGGTCAACTGAAATATTTTAAAGCTTTAGC
GGTCTTGTCTAAAATAAAGTCGGTACGATCTCAACAATTGTAATTTTCGG
GTACTACTTTTGTCGGGTTGCACGAAAGCGACGTTTATGTAAGTTTCCAT
TTGGGATCCCTGTTTAACATCTTCCAAATCCTTGCTTCTTCAAACAAAAG
AAAAGAGGCCTTGTTCTTCCCCTCCAAATTCTTCGTCCTGCAAAACTGTT
TGAATACGCATTCGCTGTTCCACTTTTTGATAGAGTTCAAATGATATTTC
TTCTTCGGAAAGAAAGCTCAAAATTCCTTTGGCGCCCTGTAAATGGCA Coding sequence (CDS) from alignment at scaffold_371:551935..560432- >TCONS_00062758 ID=TCONS_00062758|Name=TCONS_00062758|organism=Clytia hemisphaerica|type=CDS|length=7488bp|location=Sequence derived from alignment at scaffold_371:551935..560432- (Clytia hemisphaerica) ATTCAATTCAACACGTGAAGTTTGAAAGGCGAGAAAGTTTTGAACGTTGC GGAATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGGATTATCGG CTATACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCATGGTTTCT GCTGATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATTAATCAAGT CAATTCACAGAGCAAGCGAACGATGTCAACAAGAAAAACGAAAAACAATT AATGGAGAAGACATCTTGTTTGCAATGACAACCCTAGGTTTCGATAATTA CGTTGAGCCTTTGAAAGTTTACTTGACCAAATATCGAGAGATTGCAAAAG ATGCCAAGGAGTGTGTTCAAGAATGTGTATCAGAGTTCATCAGTTTCATC ACTAGCGAATGATGGAGATGGTGCTGGTTCATACGATGACAGCCCACGTG AAATGAGAGAACAAGAATTAAGGGAACAAGACCGTTTTCTACCCATCGCC AATGTGGCTCGAATTATGAAACGTGGTGTCCCTGAGACAGGAAAGCATCA TCAACACAACCAGGGGCCACTGATACACAACAACAGCAACAACAACAGCA AACAAATACTGCCACACCTTTGACAGAGTACACTATGTACCACCATTTAC CATCTACAGTCATGAACCAACAAAATAATACAGATATTTATCAAAATGGA AGAGAAACCTAAAATGAAAACATTGGGAGACGAGGCACCTTCTAAAGTGA CACCAATGTCAGTCCTTGGACAAGATAAAGCATCTACATCATCTTTAAGG AATCCTGGCATGTCATCAAATCAATCTTTGGTTATGCAACTTCAGCACGC AACACAAATGTCCAATATCACTGGAACTGCAACAACAGCGACTTATCAAC TTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGGATTCAATTCAACAC GTGAAGTTTGAAAGGCGAGAAAGTTTTGAACGTTGCGGAATATGCTCACC ATGTAGATAGCGAAGAACAAGCCAGTGGATTATCGGCTATACAATATCAA ATCGCTGGTAGCAACCTTCATCCGAGCATGGTTTCTGCTGATGGAACACC GTACGCTGCGTACACTCAAGCTCAAATTAATCAAGTCAATTCACAGAGCA AGCGAACGATGTCAACAAGAAAAACGAAAAACAATTAATGGAGAAGACAT CTTGTTTGCAATGACAACCCTAGGTTTCGATAATTACGTTGAGCCTTTGA AAGTTTACTTGACCAAATATCGAGAGATTGCAAAAGATGCCAAGGAGTGT GTTCAAGAATGTGTATCAGAGTTCATCAGTTTCATCACTAGCGAATGATG GAGATGGTGCTGGTTCATACGATGACAGCCCACGTGAAATGAGAGAACAA GAATTAAGGGAACAAGACCGTTTTCTACCCATCGCCAATGTGGCTCGAAT TATGAAACGTGGTGTCCCTGAGACAGGAAAGCATCATCAACACAACCAGG GGCCACTGATACACAACAACAGCAACAACAACAGCAAACAAATACTGCCA CACCTTTGACAGAGTACACTATGTACCACCATTTACCATCTACAGTCATG AACCAACAAAATAATACAGATATTTATCAAAATGGAAGAGAAACCTAAAA TGAAAACATTGGGAGACGAGGCACCTTCTAAAGTGACACCAATGTCAGTC CTTGGACAAGATAAAGCATCTACATCATCTTTAAGGAATCCTGGCATGTC ATCAAATCAATCTTTGGTTATGCAACTTCAGCACGCAACACAAATGTCCA ATATCACTGGAACTGCAACAACAGCGACTTATCAACTTAGTGGATGAAAG TGAGTGGCTGAGCAGGTTGTGGATTCAATTCAACACGTGAAGTTTGAAAG GCGAGAAAGTTTTGAACGTTGCGGAATATGCTCACCATGTAGATAGCGAA GAACAAGCCAGTGGATTATCGGCTATACAATATCAAATCGCTGGTAGCAA CCTTCATCCGAGCATGGTTTCTGCTGATGGAACACCGTACGCTGCGTACA CTCAAGCTCAAATTAATCAAGTCAATTCACAGAGCAAGCGAACGATGTCA ACAAGAAAAACGAAAAACAATTAATGGAGAAGACATCTTGTTTGCAATGA CAACCCTAGGTTTCGATAATTACGTTGAGCCTTTGAAAGTTTACTTGACC AAATATCGAGAGATTGCAAAAGATGCCAAGGAGTGTGTTCAAGAATGTGT ATCAGAGTTCATCAGTTTCATCACTAGCGAATGATGGAGATGGTGCTGGT TCATACGATGACAGCCCACGTGAAATGAGAGAACAAGAATTAAGGGAACA AGACCGTTTTCTACCCATCGCCAATGTGGCTCGAATTATGAAACGTGGTG TCCCTGAGACAGGAAAGCATCATCAACACAACCAGGGGCCACTGATACAC AACAACAGCAACAACAACAGCAAACAAATACTGCCACACCTTTGACAGAG TACACTATGTACCACCATTTACCATCTACAGTCATGAACCAACAAAATAA TACAGATATTTATCAAAATGGAAGAGAAACCTAAAATGAAAACATTGGGA GACGAGGCACCTTCTAAAGTGACACCAATGTCAGTCCTTGGACAAGATAA AGCATCTACATCATCTTTAAGGAATCCTGGCATGTCATCAAATCAATCTT TGGTTATGCAACTTCAGCACGCAACACAAATGTCCAATATCACTGGAACT GCAACAACAGCGACTTATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCA GGTTGTGGATTCAATTCAACACGTGAAGTTTGAAAGGCGAGAAAGTTTTG AACGTTGCGGAATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGG ATTATCGGCTATACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCA TGGTTTCTGCTGATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATT AATCAAGTCAATTCACAGAGCAAGCGAACGATGTCAACAAGAAAAACGAA AAACAATTAATGGAGAAGACATCTTGTTTGCAATGACAACCCTAGGTTTC GATAATTACGTTGAGCCTTTGAAAGTTTACTTGACCAAATATCGAGAGAT TGCAAAAGATGCCAAGGAGTGTGTTCAAGAATGTGTATCAGAGTTCATCA GTTTCATCACTAGCGAATGATGGAGATGGTGCTGGTTCATACGATGACAG CCCACGTGAAATGAGAGAACAAGAATTAAGGGAACAAGACCGTTTTCTAC CCATCGCCAATGTGGCTCGAATTATGAAACGTGGTGTCCCTGAGACAGGA AAGCATCATCAACACAACCAGGGGCCACTGATACACAACAACAGCAACAA CAACAGCAAACAAATACTGCCACACCTTTGACAGAGTACACTATGTACCA CCATTTACCATCTACAGTCATGAACCAACAAAATAATACAGATATTTATC AAAATGGAAGAGAAACCTAAAATGAAAACATTGGGAGACGAGGCACCTTC TAAAGTGACACCAATGTCAGTCCTTGGACAAGATAAAGCATCTACATCAT CTTTAAGGAATCCTGGCATGTCATCAAATCAATCTTTGGTTATGCAACTT CAGCACGCAACACAAATGTCCAATATCACTGGAACTGCAACAACAGCGAC TTATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGGATTCAA TTCAACACGTGAAGTTTGAAAGGCGAGAAAGTTTTGAACGTTGCGGAATA TGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGGATTATCGGCTATAC AATATCAAATCGCTGGTAGCAACCTTCATCCGAGCATGGTTTCTGCTGAT GGAACACCGTACGCTGCGTACACTCAAGCTCAAATTAATCAAGTCAATTC ACAGAGCAAGCGAACGATGTCAACAAGAAAAACGAAAAACAATTAATGGA GAAGACATCTTGTTTGCAATGACAACCCTAGGTTTCGATAATTACGTTGA GCCTTTGAAAGTTTACTTGACCAAATATCGAGAGATTGCAAAAGATGCCA AGGAGTGTGTTCAAGAATGTGTATCAGAGTTCATCAGTTTCATCACTAGC GAATGATGGAGATGGTGCTGGTTCATACGATGACAGCCCACGTGAAATGA GAGAACAAGAATTAAGGGAACAAGACCGTTTTCTACCCATCGCCAATGTG GCTCGAATTATGAAACGTGGTGTCCCTGAGACAGGAAAGCATCATCAACA CAACCAGGGGCCACTGATACACAACAACAGCAACAACAACAGCAAACAAA TACTGCCACACCTTTGACAGAGTACACTATGTACCACCATTTACCATCTA CAGTCATGAACCAACAAAATAATACAGATATTTATCAAAATGGAAGAGAA ACCTAAAATGAAAACATTGGGAGACGAGGCACCTTCTAAAGTGACACCAA TGTCAGTCCTTGGACAAGATAAAGCATCTACATCATCTTTAAGGAATCCT GGCATGTCATCAAATCAATCTTTGGTTATGCAACTTCAGCACGCAACACA AATGTCCAATATCACTGGAACTGCAACAACAGCGACTTATCAACTTAGTG GATGAAAGTGAGTGGCTGAGCAGGTTGTGGATTCAATTCAACACGTGAAG TTTGAAAGGCGAGAAAGTTTTGAACGTTGCGGAATATGCTCACCATGTAG ATAGCGAAGAACAAGCCAGTGGATTATCGGCTATACAATATCAAATCGCT GGTAGCAACCTTCATCCGAGCATGGTTTCTGCTGATGGAACACCGTACGC TGCGTACACTCAAGCTCAAATTAATCAAGTCAATTCACAGAGCAAGCGAA CGATGTCAACAAGAAAAACGAAAAACAATTAATGGAGAAGACATCTTGTT TGCAATGACAACCCTAGGTTTCGATAATTACGTTGAGCCTTTGAAAGTTT ACTTGACCAAATATCGAGAGATTGCAAAAGATGCCAAGGAGTGTGTTCAA GAATGTGTATCAGAGTTCATCAGTTTCATCACTAGCGAATGATGGAGATG GTGCTGGTTCATACGATGACAGCCCACGTGAAATGAGAGAACAAGAATTA AGGGAACAAGACCGTTTTCTACCCATCGCCAATGTGGCTCGAATTATGAA ACGTGGTGTCCCTGAGACAGGAAAGCATCATCAACACAACCAGGGGCCAC TGATACACAACAACAGCAACAACAACAGCAAACAAATACTGCCACACCTT TGACAGAGTACACTATGTACCACCATTTACCATCTACAGTCATGAACCAA CAAAATAATACAGATATTTATCAAAATGGAAGAGAAACCTAAAATGAAAA CATTGGGAGACGAGGCACCTTCTAAAGTGACACCAATGTCAGTCCTTGGA CAAGATAAAGCATCTACATCATCTTTAAGGAATCCTGGCATGTCATCAAA TCAATCTTTGGTTATGCAACTTCAGCACGCAACACAAATGTCCAATATCA CTGGAACTGCAACAACAGCGACTTATCAACTTAGTGGATGAAAGTGAGTG GCTGAGCAGGTTGTGGATTCAATTCAACACGTGAAGTTTGAAAGGCGAGA AAGTTTTGAACGTTGCGGAATATGCTCACCATGTAGATAGCGAAGAACAA GCCAGTGGATTATCGGCTATACAATATCAAATCGCTGGTAGCAACCTTCA TCCGAGCATGGTTTCTGCTGATGGAACACCGTACGCTGCGTACACTCAAG CTCAAATTAATCAAGTCAATTCACAGAGCAAGCGAACGATGTCAACAAGA AAAACGAAAAACAATTAATGGAGAAGACATCTTGTTTGCAATGACAACCC TAGGTTTCGATAATTACGTTGAGCCTTTGAAAGTTTACTTGACCAAATAT CGAGAGATTGCAAAAGATGCCAAGGAGTGTGTTCAAGAATGTGTATCAGA GTTCATCAGTTTCATCACTAGCGAATGATGGAGATGGTGCTGGTTCATAC GATGACAGCCCACGTGAAATGAGAGAACAAGAATTAAGGGAACAAGACCG TTTTCTACCCATCGCCAATGTGGCTCGAATTATGAAACGTGGTGTCCCTG AGACAGGAAAGCATCATCAACACAACCAGGGGCCACTGATACACAACAAC AGCAACAACAACAGCAAACAAATACTGCCACACCTTTGACAGAGTACACT ATGTACCACCATTTACCATCTACAGTCATGAACCAACAAAATAATACAGA TATTTATCAAAATGGAAGAGAAACCTAAAATGAAAACATTGGGAGACGAG GCACCTTCTAAAGTGACACCAATGTCAGTCCTTGGACAAGATAAAGCATC TACATCATCTTTAAGGAATCCTGGCATGTCATCAAATCAATCTTTGGTTA TGCAACTTCAGCACGCAACACAAATGTCCAATATCACTGGAACTGCAACA ACAGCGACTTATCAACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGT GGATTCAATTCAACACGTGAAGTTTGAAAGGCGAGAAAGTTTTGAACGTT GCGGAATATGCTCACCATGTAGATAGCGAAGAACAAGCCAGTGGATTATC GGCTATACAATATCAAATCGCTGGTAGCAACCTTCATCCGAGCATGGTTT CTGCTGATGGAACACCGTACGCTGCGTACACTCAAGCTCAAATTAATCAA GTCAATTCACAGAGCAAGCGAACGATGTCAACAAGAAAAACGAAAAACAA TTAATGGAGAAGACATCTTGTTTGCAATGACAACCCTAGGTTTCGATAAT TACGTTGAGCCTTTGAAAGTTTACTTGACCAAATATCGAGAGATTGCAAA AGATGCCAAGGAGTGTGTTCAAGAATGTGTATCAGAGTTCATCAGTTTCA TCACTAGCGAATGATGGAGATGGTGCTGGTTCATACGATGACAGCCCACG TGAAATGAGAGAACAAGAATTAAGGGAACAAGACCGTTTTCTACCCATCG CCAATGTGGCTCGAATTATGAAACGTGGTGTCCCTGAGACAGGAAAGCAT CATCAACACAACCAGGGGCCACTGATACACAACAACAGCAACAACAACAG CAAACAAATACTGCCACACCTTTGACAGAGTACACTATGTACCACCATTT ACCATCTACAGTCATGAACCAACAAAATAATACAGATATTTATCAAAATG GAAGAGAAACCTAAAATGAAAACATTGGGAGACGAGGCACCTTCTAAAGT GACACCAATGTCAGTCCTTGGACAAGATAAAGCATCTACATCATCTTTAA GGAATCCTGGCATGTCATCAAATCAATCTTTGGTTATGCAACTTCAGCAC GCAACACAAATGTCCAATATCACTGGAACTGCAACAACAGCGACTTATCA ACTTAGTGGATGAAAGTGAGTGGCTGAGCAGGTTGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00062758-exon-scaffold_371-1575043694:560391..560432 | TCONS_00062758-exon-scaffold_371-1575043694:560391..560432 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:558293..558503 | TCONS_00062758-exon-scaffold_371-1575043694:558293..558503 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:557958..558095 | TCONS_00062758-exon-scaffold_371-1575043694:557958..558095 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:557508..557644 | TCONS_00062758-exon-scaffold_371-1575043694:557508..557644 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:556398..556465 | TCONS_00062758-exon-scaffold_371-1575043694:556398..556465 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:554311..554440 | TCONS_00062758-exon-scaffold_371-1575043694:554311..554440 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:553771..553962 | TCONS_00062758-exon-scaffold_371-1575043694:553771..553962 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1575043694:551935..553389 | TCONS_00062758-exon-scaffold_371-1575043694:551935..553389 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:560391..560432 | TCONS_00062758-exon-scaffold_371-1510915933:560391..560432 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:558293..558503 | TCONS_00062758-exon-scaffold_371-1510915933:558293..558503 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:557958..558095 | TCONS_00062758-exon-scaffold_371-1510915933:557958..558095 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:557508..557644 | TCONS_00062758-exon-scaffold_371-1510915933:557508..557644 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:556398..556465 | TCONS_00062758-exon-scaffold_371-1510915933:556398..556465 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:554311..554440 | TCONS_00062758-exon-scaffold_371-1510915933:554311..554440 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:553771..553962 | TCONS_00062758-exon-scaffold_371-1510915933:553771..553962 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1510915933:551935..553389 | TCONS_00062758-exon-scaffold_371-1510915933:551935..553389 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:560391..560432 | TCONS_00062758-exon-scaffold_371-1491911889:560391..560432 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:558293..558503 | TCONS_00062758-exon-scaffold_371-1491911889:558293..558503 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:557958..558095 | TCONS_00062758-exon-scaffold_371-1491911889:557958..558095 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:557508..557644 | TCONS_00062758-exon-scaffold_371-1491911889:557508..557644 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:556398..556465 | TCONS_00062758-exon-scaffold_371-1491911889:556398..556465 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:554311..554440 | TCONS_00062758-exon-scaffold_371-1491911889:554311..554440 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:553771..553962 | TCONS_00062758-exon-scaffold_371-1491911889:553771..553962 | Clytia hemisphaerica | exon |
TCONS_00062758-exon-scaffold_371-1491911889:551935..553389 | TCONS_00062758-exon-scaffold_371-1491911889:551935..553389 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_371 | supercontig | scaffold_371:551935..560432 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0043565 | sequence-specific DNA binding |
GO:0046982 | protein heterodimerization activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
cellular_component |
GO:0005634 |
nucleus |
molecular_function |
GO:0046982 |
protein heterodimerization activity |
molecular_function |
GO:0043565 |
sequence-specific DNA binding |
Blast
BLAST of TCONS_00062758 vs. Swiss-Prot (Human)
Match: NFYB (Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 3.030e-54 Identity = 102/168 (60.71%), Postives = 123/168 (73.21%), Query Frame = 1
Query: 442 EQELREQDRFLPIANVARIMKRGVPETGKIAKDAKECVQECVSEFISFITSEASERCQQEKRKTINGEDILFAMTTLGFDNYVEPLKVYLTKYRESLKGEKVLNVAEYAHHVDSEEQASGLSAIQYQIAGSNLHPS-MVSADGTP--YAAYTQA--QINQVNSQIQFN 930
++ REQD +LPIANVARIMK +P+TGKIAKDAKECVQECVSEFISFITSEASERC QEKRKTINGEDILFAM+TLGFD+YVEPLK+YL K+RE++KGEK + A A GLS + A +N P+ +++ DG YT + QI+ V QIQF+
Sbjct: 49 KESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTA--------TDGLSEELTEEAFTNQLPAGLITTDGQQQNVMVYTTSYQQISGVQ-QIQFS 207
The following BLAST results are available for this feature:
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