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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062684 ID=TCONS_00062684|Name=TCONS_00062684|organism=Clytia hemisphaerica|type=transcript|length=1110bp
ATGTGATTGTTTGCGTTCTATACAGGGAACttttaaacaaatattttgcc
aaattcCTGTTTCGTCTTGCAAGGGAATTTTCTGTCTAAAGTCAAATGGA
TTTTCCCTGTCTAAATCCCTACTCTATATAAAGTGAATCTCGTACTGCTT
GGCTTTGTCAGTCATCTTCTACAGGAAACTTAATACGGTGTTGAACACAA
ATATTCCAAAACATCTTGCTTAAGATGGCTGACTTCTTAGTCTATTTATT
AAATGGGATTCTTTCACAATCTGGCTCAGCTAAAATCGAGAGCTGGAAAG
AAACAAGCTTATTTTGTAAATCAATCATACTGGAGGTTCAGTGTGTTCGT
GGAAAATTGGTCAAGTGTTTACTGCCATTTGCTAAATTCGTGCTACCATG
GCCTCTTgtgtttttagcaatttttgcacCCAGAGTTTGTTCCTCTGACA
CAAGTTCTGATAAGGAGGTGAGcgaagaaaagaagagaaagtGTCATTTT
CTAGACGAACCcatcagaaaaaaatcgtgccaGTCCACATCACAGGAACT
CCAAATTTGTCGACCTTCGAGTGATGGTTTCAACCTGCTGAGTTTTGACT
TTGAGAATGACGAAGTGCTCTTTGAAGAAATAGCTTTAAAGCTTTGCCAA
ATTGGTGATGACATGATGGAGAAATACAATGCGAAAAGTTGGTACCAGTT
TTGGTGATCGAATTAATCTTTTTAGATGCAAGTATAGTTAGAGTTTTTGT
ATATAGTTTATTTAGAGGAAGAGgtatattttaaaagtttattttatcGA
ACTAGCTAAATTTGAAATAtgaattttatcaattttgtaacatatttgaa
ttatttttgtccTATGATACTCcatgaattttattttgcaaCTCTCTGTT
TGTCTTAtggatttataaaaaaataaagggAAACATTTTTGCTTTCAAGC
TTTTGATTTCTATGAAATTACACATTTTAAATTGTGTTTTTAGGTCTTTT
TTAGGATCTGCACCAATCGAAGtaacgaaagtgccaaatgattttcaaat
tttgaaatttaaaatgaagtaaaaattttcaaatttcaaaatttgaaaaa
tgaaaaatgg Run BLAST on NCBI transcript from alignment at scaffold_371:422811..424129+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062684 ID=TCONS_00062684|Name=TCONS_00062684|organism=Clytia hemisphaerica|type=transcript|length=1319bp|location=Sequence derived from alignment at scaffold_371:422811..424129+ (Clytia hemisphaerica)
ATGTGATTGTTTGCGTTCTATACAGGGAACttttaaacaaatattttgcc
aaattcCTGTTTCGTCTTGCAAGGGAATTTTCTGTCTAAAGTCAAATGGA
TTTTCCCTGTCTAAATCCCTACTCTATATAAAGTGAATCTCGTACTGCTT
GGCTTTGTCAGTCATCTTCTACAGGAAACTTAATACGGTGTTGAACACAA
ATATTCCAAAACATCTTGCTTAAGATGGCTGACTTCTTAGTCTATTTATT
AAATGGGATTCTTTCACAATCTGGCTCAGCTAAAATCGAGAGCTGGAAAG
AAACAAGCTTATTTTGTAAGTTAAtcatttttaaatagtttttatgCTTT
TTTTTGGAGACTCTCAGTGCACTCTGTAAAAATATGATAGGCTAGCCAAA
GGCGgacattgatttcaaagcccgaGCTTCAAACTCGCGAAATCCTTAGC
CTTTATGGCATGGTACTTTTCCGGTCATATGATAAGTTCATGGTCAAGTA
ATATATTCATTTCTTTGTCTTCAGGTAAATCAATCATACTGGAGGTTCAG
TGTGTTCGTGGAAAATTGGTCAAGTGTTTACTGCCATTTGCTAAATTCGT
GCTACCATGGCCTCTTgtgtttttagcaatttttgcacCCAGAGTTTGTT
CCTCTGACACAAGTTCTGATAAGGAGGTGAGcgaagaaaagaagagaaag
tGTCATTTTCTAGACGAACCcatcagaaaaaaatcgtgccaGTCCACATC
ACAGGAACTCCAAATTTGTCGACCTTCGAGTGATGGTTTCAACCTGCTGA
GTTTTGACTTTGAGAATGACGAAGTGCTCTTTGAAGAAATAGCTTTAAAG
CTTTGCCAAATTGGTGATGACATGATGGAGAAATACAATGCGAAAAGTTG
GTACCAGTTTTGGTGATCGAATTAATCTTTTTAGATGCAAGTATAGTTAG
AGTTTTTGTATATAGTTTATTTAGAGGAAGAGgtatattttaaaagttta
ttttatcGAACTAGCTAAATTTGAAATAtgaattttatcaattttgtaac
atatttgaattatttttgtccTATGATACTCcatgaattttattttgcaa
CTCTCTGTTTGTCTTAtggatttataaaaaaataaagggAAACATTTTTG
CTTTCAAGCTTTTGATTTCTATGAAATTACACATTTTAAATTGTGTTTTT
AGGTCTTTTTTAGGATCTGCACCAATCGAAGtaacgaaagtgccaaatga
ttttcaaattttgaaatttaaaatgaagtaaaaattttcaaatttcaaaa
tttgaaaaatgaaaaatgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062684-exon-scaffold_371-1491911889:422811..423125 | TCONS_00062684-exon-scaffold_371-1491911889:422811..423125 | Clytia hemisphaerica | exon |
| TCONS_00062684-exon-scaffold_371-1510915933:422811..423125 | TCONS_00062684-exon-scaffold_371-1510915933:422811..423125 | Clytia hemisphaerica | exon |
| TCONS_00062684-exon-scaffold_371-1575043694:422811..423125 | TCONS_00062684-exon-scaffold_371-1575043694:422811..423125 | Clytia hemisphaerica | exon |
| TCONS_00062684-exon-scaffold_371-1491911889:423335..424129 | TCONS_00062684-exon-scaffold_371-1491911889:423335..424129 | Clytia hemisphaerica | exon |
| TCONS_00062684-exon-scaffold_371-1510915933:423335..424129 | TCONS_00062684-exon-scaffold_371-1510915933:423335..424129 | Clytia hemisphaerica | exon |
| TCONS_00062684-exon-scaffold_371-1575043694:423335..424129 | TCONS_00062684-exon-scaffold_371-1575043694:423335..424129 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_371 | supercontig | scaffold_371:422811..424129 + |
Blast
The following BLAST results are available for this feature:
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