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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060741 ID=TCONS_00060741|Name=TCONS_00060741|organism=Clytia hemisphaerica|type=transcript|length=351bp
CTTTcaggtaaaaatcaaaataatggtGTTTTAATAAAGGAAAATTTCTA
ATAATGgctgcccagctggcacacaacgttgtttcaatgttcatctaacg
ttaaatggacgctgtgaacgttagataaacgttgaaacaacgatGTGTGC
CAGCTGGCTGGTCATGTTTTAAGAATAAATAGAGGAGCTTTATTCAGTTT
GAGAACAATCTTTCAACAATTTGGAAAAAGCACAGAAATTCGATAAAGGC
TGCCATCGCAATACACAAACTCATTATGGGAGAACACTTGGCATCGGTGG
CAAAAACTATCCTTAGGATCGTAGGTTCGTCCTCTGCACCTCTTTTCCTT
G Run BLAST on NCBI transcript from alignment at scaffold_348:486809..487967- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060741 ID=TCONS_00060741|Name=TCONS_00060741|organism=Clytia hemisphaerica|type=transcript|length=1159bp|location=Sequence derived from alignment at scaffold_348:486809..487967- (Clytia hemisphaerica)
CTTTCAGGTAAAAATCAAAATAATGGTGTTTTAATAAAGGAAAATTTCTA
ATAATGGCTGCCCAGCTGGCACACAACGTTGTTTCAATGTTCATCTAACG
TTAAATGGACGCTGTGAACGTTAGATAAACGTTGAAACAACGATGTGTGC
CAGCTGGCTGGTCATGTTTTAAGAATAAATAGAGGAGCTTTATTCAGTTT
GAGAACAATCTTTCAACAATTTGGAAAAAGCACAGAAATTCGTAAGTATC
AATTTCACTGATTTCTCTTAAATGTGTGGGTGTGTGTGTTTGTAGTTTGA
GATTGTTATCTACGAATTCCAAAATATGGCTGTTAATTTCTTTTCTCTTA
ATTCAACGCTTATTTATTAAAAATGGTATTCAGATGTTTCTGGTTTATGT
TTCTTTATTTAATTAAATATCTTCTTTACAAGGGATAAATTCCGTGGAGG
GGGGCCACTCAAGTTAAACGACCTACCGTACGTGCGGCCCTTAAGGGTCC
CTTCTCCAAGCTTACCAAAATGCACAGTAAGGGTCAAAATGAGCAAAGAT
GAGAAAAGTACACTCTAAGGAGTAAAATTTGACCATATCGTGCCTAAAAA
CGGTCAAATATCTTAAAGAAAATGCACCGTAAGGGAAGTTTTTTTGCACA
AATTTACTCAAATTTGGCTAAATTTTCTTTGCACTGTAAGGGTCTGACTT
CAAAGGCCTAATTTTAGGCCGCACGTATGGTCGTTTTCTAATCGAGTGCC
CCACCCCCACCGGGACAAAATTTGATAAGTAATTTCAGAAATCTTATAAT
CTTATTACATGCAAATCTTAAAAGATTTGAAATATACTCCATAAGAAATT
ATAAATTCTTGGATACAGAAAGTTTTACTAACACAATACTTGTCTTATGA
ATAATTTTTAAATTTTCATAATAATTTATTTTGCAAACAAAATAATTCAT
CCATACAACGTCACGTGACTTGGTATTGATTGATACGATGGTAAATGAAT
TTCGAAGGTATCATAAGGGATCTTTAAATTTGTTTTCGGGATGTCTTAGG
ATAAAGGCTGCCATCGCAATACACAAACTCATTATGGGAGAACACTTGGC
ATCGGTGGCAAAAACTATCCTTAGGATCGTAGGTTCGTCCTCTGCACCTC
TTTTCCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060741-exon-scaffold_348-1575043694:487727..487967 | TCONS_00060741-exon-scaffold_348-1575043694:487727..487967 | Clytia hemisphaerica | exon |
| TCONS_00060741-exon-scaffold_348-1575043694:486809..486918 | TCONS_00060741-exon-scaffold_348-1575043694:486809..486918 | Clytia hemisphaerica | exon |
| TCONS_00060741-exon-scaffold_348-1510915933:487727..487967 | TCONS_00060741-exon-scaffold_348-1510915933:487727..487967 | Clytia hemisphaerica | exon |
| TCONS_00060741-exon-scaffold_348-1510915933:486809..486918 | TCONS_00060741-exon-scaffold_348-1510915933:486809..486918 | Clytia hemisphaerica | exon |
| TCONS_00060741-exon-scaffold_348-1491911889:487727..487967 | TCONS_00060741-exon-scaffold_348-1491911889:487727..487967 | Clytia hemisphaerica | exon |
| TCONS_00060741-exon-scaffold_348-1491911889:486809..486918 | TCONS_00060741-exon-scaffold_348-1491911889:486809..486918 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_348 | supercontig | scaffold_348:486809..487967 - |
Blast
The following BLAST results are available for this feature:
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