TCONS_00059618 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059618
Unique NameTCONS_00059618
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1504

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059618 ID=TCONS_00059618|Name=TCONS_00059618|organism=Clytia hemisphaerica|type=transcript|length=1504bp
GTGTTAAAAATGGTACACTCAGCTCTGacagatcattttgatggaagttg
ttggaatgtttacaagactcttgacagaaaatcctttgttttattgtcaa
taatGACAGTGCCGTTGTTAATTTTGTtaagatctgacatattgatgttt
gtaagtgcactttatagttttgattcccattaaagaatcattttctggtt
ttcatgttattagatgctgttttagagctttagagctagcctgccaGTAA
GATCACCACAACTGCAGTTAAACCAACTATATGTAACTTTAATCATTAGG
GGAAGCAGGGGGCAATCAACATTTCAGCTAATCAAAACGTTAACACAGAA
AAGCGTGATTAAATGAAACTAAATgtaattcttacttttttagatatttt
aaacCACACATAATAAACATATAAAGCATGGCAAAAAGAAAgAGCACTGA
AGGTGAACAGGCAGCCagtaaaaagtccaaaaaagaagatgaaaaggTTG
ATGAAGTTgaGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTTGTTACA
AAAACTAAAGATGGAAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGT
AGCAGGACTGAGAGCATGTCTAAAGAAAGCTGGTCTTGATTACATTAAGG
AAGAAGACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAA
GAAATCCCTGGAGAGGTTACTCAATTGGACAAGAAAGTGCCATCTATACT
ACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAG
GATATAGTGGTGTCAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAG
AATGGAATGGGTAAAGAGGAACATGATAATGAAGGACGTCTGATTACTGC
TGAATTTGATAAATACTATGTTGTAACATCATATGTGCCAAACTCTGGAA
AGAAGCTAGTGAGaCTTGATTACAGGCGAAGTTGGAACACAGATTTGAAA
GACTATTTGAATaaactaaaagaaaagaaaccagTTGTCTTTTGTGGAGA
TTTAAATGTCGCTCACCAAGAAATAGATATTGCCAACCCTAAAGCAAATA
AGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTC
TTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGA
AAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATG
TCGGATGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGAC
CTATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCC
TATAGTTGCTACTTTTGCTATAAAGTAATACGGTTTCTTACGATTCCTTA
TCATCTTCTTTAGATCTTTTGTAAATATCACTTTATATcataaaatgtaa
ataaaaccTTTCGTTTTCACTTTTAATACTGCAATTATGATTCTACTTCC
TCAC
Run BLAST on NCBI

protein sequence of TCONS_00059618-protein

>TCONS_00059618-protein ID=TCONS_00059618-protein|Name=TCONS_00059618-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
MAKRKSTEGEQAASKKSKKEDEKVDEVEKENDQKENFSLVTKTKDGRDSN
LKICSWNVAGLRACLKKAGLDYIKEEDADIVCLQETKVTEKEIPGEVTQL
DKKVPSILPKKDGYYMYWYEAEKKGYSGVSLWSKTKPVSIKNGMGKEEHD
NEGRLITAEFDKYYVVTSYVPNSGKKLVRLDYRRSWNTDLKDYLNKLKEK
KPVVFCGDLNVAHQEIDIANPKANKRNSGFTDEERGDMTELLNEGYIDSY
RSLYPDQEKMYTFWTYMANARAKNVGWRIDYFILSKSLEEDLCDSIMRTK
VMGSDHCPIVATFAIK
Run BLAST on NCBI

transcript from alignment at scaffold_329:750344..757275-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059618 ID=TCONS_00059618|Name=TCONS_00059618|organism=Clytia hemisphaerica|type=transcript|length=6932bp|location=Sequence derived from alignment at scaffold_329:750344..757275- (Clytia hemisphaerica)
GTGTTAAAAATGGTACACTCAGCTCTGACAGATCATTTTGATGGAAGTTG
TTGGAATGTTTACAAGACTCTTGACAGAAAATCCTTTGTTTTATTGTCAA
TAATGACAGTGCCGTTGTTAATTTTGTTAAGATCTGACATATTGATGTTT
GTAAGTGCACTTTATAGTTTTGATTCCCATTAAAGAATCATTTTCTGGTT
TTCATGTTATTAGATGCTGTTTTAGAGCTTTAGAGCTAGCCTGCCAGTAA
GATCACCACAACTGCAGTTAAACCAACTATATGTAACTTTAATCATTAGG
GGAAGCAGGGGGCAATCAACATTTCAGCTAATCAAAACGTTAACACAGAA
AAGCGTGATTAAATGAAACTAAATGTAATTCTTACTTTTTTAGATATTTT
AAACCACACATAATAAACATATAAAGCATGGCAAAAAGAAAGGTAATTTA
TTTTCTTATCTTAACAAAACATTTTTTATTTAGAAAACCATGTCATTAAG
AATAAAAAATGCTTGCTACATAACATTTCAAAACAGAACAAGGATAAATT
CAATTCATCTTCTATTATACCAAAATGTCTTCTCTCGACAGAGCACTGAA
GGTGAACAGGCAGCCAGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGA
TGAAGTTGTAAGTAGTTGACTCATATTTATGATTAAACCTTACCAGGTGT
GCCATAAGAAAATCCTGTGTTTACATAATATAAGAACTTTCTATGGATCC
TTTTTATTGCAAAAACTTGAACTTGAAATTTAAAATCGCCTCAATCATTC
AAAAGTTATGTTAAAAAAACTTCTGACCTTCCCAAAAATCTCAAAGTTCA
TTAAAAACAATAGTAGTAGGTCTTTAGATCTTCAACTTAGACTGCTGAAC
ATGGTTCTTATTGGTAATATTCTAAAAGTCAATCTTCAATTTTTTAGGAG
AAAGAAAACGATCAAAAGGAAAACTTTTCTCTTGTTACAAAAACTAAAGA
TGGAAGGTATGTACTTATATAAATCATCTTCTAAGCATTACCTCCTAAAA
TTTTGCAATGTTTATAACTATGCTATTTTTGTGTGAAACATTAAAAAGAA
CGTTTGTTGTTGCCCTGATGATCTTTATTCGTCATTTAGTATAAAGAATA
TTTTTTATCGTCTTAAATTTCATATCTTTTAATTGTCTGACAGGGATTCA
AATTTGAAGATTTGTAGTTGGAATGTAGCAGGACTGAGAGCATGTCTAAA
GGTACTTTAAATGTCATGTGAATTTTTACAAATTATTTGAGTTTTGAAGT
AATTTCGCTGTAAGATCTTCCTCATTCTTTAGCTTTCTGTTACCTGGATA
TACAGGTTAGTCTAAGTAAAAGTACCGTGTCAGACAATTTGAGTAGAAAA
TATGTTTATCTTTTTCTATTTCTTCTTTTAAAAAATTCACTAGCAATCCA
AACTGTAATTATTTACAAATCACAAGAATGCAATAATGGCACACAAAGAA
AAAAAACTGTAAACGTTATCAATTTAATAAAAGACACAGAGGAAAAAGGT
GCCTTGAAACTGTTGTTGTTACCTACCTTGTTGTTAGATAAATCTTCCAT
GATTTTATTTTACAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGACGC
TGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCCCTG
GAGAGGTATAATAGGTTTCAAATATTATATAGAAGTTGTTGATAAATCTT
TCATGATTAAAGGTTTTAAGTCGGAATACCTTTCTTGTTCGGGAGGCCAT
TTTTTAAGATAATGGGCATTGCTTTGCAGCATACCTTGAGAGAAGGAGTT
TTTAGTTTTAATTTTAGCGGATACAGTAGTAATGAATTTTGCAAGTTTTC
AAAGCAATTCACCAAAATTTCTTCCATTAGGGTAACTTCTCCTCTTTTCT
ATTTTGCCAAAATTAAAAAAAAAAACTTTCTAATTAGGTGTCATTTTCTA
ACCTTCTTCTTTTAAGGTTACTCAATTGGACAAGAAAGTGCCATCTATAC
TACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAA
GGATATAGTGGTGTCAGGTATTGTTTTCAATGAAAATTACTCCTAGATCA
GATCTCCTCACGAACATGATAAATTGTCCTCAGTTAAATTGGTTTAGATG
CTTCAATCCTCACATCTGTTATCAGCATTATACCTACGTCGATAATAAAT
GTTTTGAAATATTGTCTTTTTTTTGGGATTTTTGATCAATTTAAGGACCA
TTTTATTCTAAGAATGTCATGCCTAAGTTAGATTTAAATGCTGTGAAACA
TTCTACATTGAAATTATTATTTCACACTTCAGTTTATGGTCAAAAACAAA
GCCAGTCAGCATAAAGAATGGAATGGGTAAAGAGGAACATGATAATGAAG
GACGTCTGATTACTGCTGAATTTGATAAATACTATGTTGTAACATCATGT
AAGTGTTTTTTCACCGTTATGAGCCTTCGTTTCAACTGATATGAGCCTCA
TGTTGAGGAATCATGACTAATGATTTTATCATTGCTTGGCCAAACAAGAT
TTCATTTAATTTTTATATGTCCCTGCTCAGAAACGGAACAAATTTGAATT
TTAATAAACGGCCGTTTATACCAATGGAGGTCCTTTTAAGGTCCGGTGGT
TATAAAGATACAGAAAGGTTTACAAACAGGGGATGTGCTTTTTAGGCAAC
TGAGAATAATTCAGTACATCCTGCGTCAGAATCATAAAATTTGTGACTTA
TTGATTGCTTGTAAAAATGTTTTTGTATTTCTCTTTAGATGTGCCAAACT
CTGGAAAGAAGCTAGTGAGGTGTTTAATTAATATCATAGTGTCCTGTAAT
AAGCTGTATCTCTAAAACAGAATTTTTAAGTTACAGCTATAGGTCGACAG
GTTCCAGGTTACGGGTTGGAAAATTATACATGGGTTAACTGACCAGATAT
AAGATATCTTGGGCTGGCAATTATGCTGTTAAAGTATTTTTCAGCAATTT
TTAGAGAAGGCATAACCACTCACCTCCTTTTTTGTGGTATGCATGTGTTA
AGTTTGTTTTAGGGCGTTTACAGTCCTGTCAACTGCTTTTGCCCATTGAG
GATTCAACTATTTCACATGTTTGTCCCTGTGTCCAGCTTACTGAATATTT
AAGATTTTTTTAAGAATTTTGTGGTGAGGATATCTATAATCAAGTGTTTT
TGCTTGCTATCAAAATTATGGAAAGACCAAATGGGATAAATTTTCGCGGG
GATTAAATTTCGCGGTTGAGTTCATCCGCGAAATTTTAAGATTTCGCGGG
GATTAATTTTCGCGGATGAGGGATTTCCTGATTTTTCGCAGGGATTTAAT
TTCGCGGATTGGGGTACAAATTAAAATTTTTGAAAAGGGTCAAAACATTG
AAAAAAAAAGGAAAATTAAGAATTTTTTTTTCAAGTAATAAGAGGGTGTT
TTGGAATAGGGCGAGGAGATATGTATTACAACTATCAAAAGTTGAATTTG
AACTTCCATGGTGTTAAAAGAAGAAAAAGAGAGATAAATAAAATGACTTA
AAATTGTTGTTTCGTTATTTTCACTCTTTCTTATCATTGAAAATAAATTC
TTTTGTTTTCCGTTTTCCCTCTTTTTCTTACATATCCTTTTAAATGTTTA
ATTTCAAGCCAGTTGGATTACCCTCTTGCATTGAAAAGCTTTTAACAATA
AGCGATCACTTTAGATAAAAAAATTTCCAATACCTTTTCCAAGTTTGTAA
ATTTGTGAAGAAAATTTTGAGGAAAACGATATCGAGGATTTGACCTTTTT
CGAGGGTTGCGTGCCCTCATGTAGAAAAAAAATAAAAAACGATAAAAATA
GAAATTTCGCGGATTGCCAAAAACATTCAAATTTTTCGCGGAAACTAATT
TTCGCGGATGGGCCTTTTTCAAATCTCCAATGGGACTTATTTTCTCGGAT
GACACCCAAATCTGCGAAATCCGCGAAAATTTATCCCATTAAAGTATTAT
CTTCCTGTTAAATATTTTCTTTTAGACTTGATTACAGGCGAAGTTGGAAC
ACAGATTTGAAAGACTATTTGAATAAACTAAAAGAAAAGAAACCAGTTGT
CTTTTGTGGAGATTTAAATGTCGCTCACCAAGAAATAGGTATGTGTAAAA
TGTGTTTTCATTTTGTATTACAAGCTGTCATTTGGTAAAAGATAAGCATA
ATGCTAAGCATCCCTCCAAGCTGAAATGCAAAAAGATTGCAGCTTTTTAA
AAACGCTGACCTTTTTAGGGTTACTTTTAAAGCTGTTTGAGCTTTCTTAG
ACCAAAGATTTTCGCCTGCGGCGCCAAATTACAAAGAAAACCTTCATTCT
TTGAGCCGAATCAATGTTCCGGCCTTTCGAAATTTTCATGAACCCAAAGA
AAAATCAACAAATCGAAGTCTAGGCATATAAATAAGCATGAATTAAGGCT
GAAAATAGATTTTGCTAAGCATATTGAGCCCCGACCCGATTTTCCCTTTG
CTTATTAAAAAATGCGTGCTCCTTGACGAGGCAGGGGGGTCGGTAGTAAA
ATCTCAGACATAATGACGTTTACTACGGTGGTGGTGTGACAAAAAATCGA
AAAAAACTTTTACTACCCAGGGCACTTAAATACCAAAATGGGTTGTATCT
ATGTGTTAAATGTTGAAAAGATTTTACTACCTGGGTAGTTAAAACTGGTA
AAATTAGCAAATTTTAGCTTTTTGGGTTATTCTTTTAATTTTTTGGATGA
CTTTTCTGAAAAAATCTGAAAATTTTTATAATTTTAAAACATTTTCTGTT
GGGAAGTTGTTTGCTGCAAACAAAAAATTCTCGAAATTTTTTGTCAATAT
AAAAAAGAATTTAATTCTAAGAGCAAAACATTAATTTTTGTACTAAGTGA
AAAATGTGTCACAGAAATAATCATTTTTTAGCTTTTTTTGTAAAATCAGT
CCGAAAAGCAACCAAAAAATAGGTGGTCTCCATGACAAATTGTCCCAAAA
ACTTTTACTACCAGGGTAGTAAAGTACATCTTCCAAGAGTCTGGGTGGTG
GTATGTAAAAATTCGTAAAAATCCTTTTACTACTCATATATGTCTGAGAT
TTTACTACCGACCGGGGGGGGGGGTCAGGCCCTGCTTGAGGCATAATTTT
GATGAATACATAATTTTTGATGAACAACACATAGTTTGTTGGAAAGGTCG
TGATTTCAATTTTACGAGAGTTACTTTTTGCGAAATTTCGGGCATACGCT
CCTCTTCTAATTTTGTTTATTACAACAATAAGGCTCAAAATGAACTATTT
AAAAACAATGCCAAGCCTAGAATGCCTGAATTCTAATCAAAGAAAGGTCA
AATCAGTAAAAATAGCCTAAAAAACCTCAGTTTTCCCTAGAAGTGATAAG
AACATCATAAGAATCATTAAAGGCTCAAACTTGCGAGAAAAAAAAAGAAC
AGCCAAGGCTCGCCAAAAACTTCCTGGTCCTTATAAAAAATCCAACTCCA
ACATTGATTTTGGGGGGAGAAAAAAGGGGGGGACTTGCCGGTGGAAAAAG
GTCATCGGACACCAGTTTTGACCACGATTGTATATCTTCTAATCTCTAGT
AAAAACTGATCATCATTATGAAGTTGAAAACAATTCCTTTTCAGATATTG
CCAACCCTAAAGCAAATAAGCGTAATTCTGGATTCACTGATGAAGAACGA
GGAGACATGACTGAACTCTTAAACGAAGGTTACATTGACTCGTACCGCTC
CTTATACCCTGATCAAGAAAAGATGTATACTTTTTGGACGTACATGGCAA
ATGCAAGAGCAAAGAATGTCGGATGGTAAGAGAAAATAATTAATTTTTTA
CCTGAAAAAGCAATCGACATAGATTGGAATAAGGACACTTTAGGGTTAAT
CTTTCGAATACTTTTCTTATCAAGTTTTGTGCCATAAAAGAAGTAAGGTT
AGGCGAGGTTAAAAATTTAAAAAAAATCGCATATAATAATGTCCATTTGA
TGAAACTCGGTGCTAAGATATTGTGAGGGAAACAATTTAAAAAGGTTTAG
GTTAAGGTAAAAAGCAAATTTGGCAAGAAGGAATGTTCTTCTTCACATTT
AACATGCATAAATTCGTCCCTCTCCAGAGGGTGAAGCTCTGACAAGGTTT
CTCCAAGCTTCTGTTTTTCATGATGTTGTTTAATTCTTTCTTTCTTTCTT
CCAGTGTCTCCTAGTATGACGGTTTTCAAAGTTGTAAAAGGTTTTTCAGT
CTTTCTCATCGAGTCTTTACCACATCGATAGCTGTGAGGCGGGCTCTTCT
CGGCGTGTCGTTGAAGGTACATTGCAGGCAACTCTGGACATTATGTGTAT
TTATCATTAATGCTTGGTGGGCTCAAGGATAAAACTTAATGTGAATGTTT
TCGAAAATGATTTTTAGGATGTTGATGCCCTACTCTTCGCCGTTATAATT
TTTGATTACTGTTTGGGGGCCGTCCCTGGCCGTCCATATAGTACGTACGC
AAAAATTTTCCAAAAATTTGATATTAATTTCTACCAATAACAATCCTAAT
GTTCTTCTCCTGAAATCTCTATAATAATTTACTGTTTTCGGAATTCAATC
TGCGAATATCATTCTCTCTTTTTTATCACATTCAGGCGTATCGATTATTT
CATTCTATCGAAATCATTGGAAGAAGACCTATGCGATAGCATCATGCGTA
CCAAAGTTATGGGTAGTGACCATTGTCCTATAGTTGCTACTTTTGCTATA
AAGTAATACGGTTTCTTACGATTCCTTATCATCTTCTTTAGATCTTTTGT
AAATATCACTTTATATCATAAAATGTAAATAAAACCTTTCGTTTTCACTT
TTAATACTGCAATTATGATTCTACTTCCTCAC

Coding sequence (CDS) from alignment at scaffold_329:750344..757275-

>TCONS_00059618 ID=TCONS_00059618|Name=TCONS_00059618|organism=Clytia hemisphaerica|type=CDS|length=10461bp|location=Sequence derived from alignment at scaffold_329:750344..757275- (Clytia hemisphaerica)
GCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCTATGCG
ATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTATAGTT
GCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAATAAGCGT
AATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTCTTAAA
CGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAAAAGA
TGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGTCGGA
TGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTATTTGAA
TAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAATGTCG
CTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTGAGTTTA
TGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAAAGAGGA
ACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAATACTATG
TTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTATACTACC
AAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAGGAT
ATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGACGCTG
ATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCCCTGGA
GAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGACTGAGAG
CATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTTGTT
ACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCCAGTAAA
AAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAAAAGAAA
GGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCTATGC
GATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTATAGT
TGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAATAAGCG
TAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTCTTAA
ACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAAAAG
ATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGTCGG
ATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTATTTGA
ATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAATGTC
GCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTGAGTTT
ATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAAAGAGG
AACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAATACTAT
GTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTATACTAC
CAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAGGA
TATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGACGCT
GATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCCCTGG
AGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGACTGAGA
GCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTTGT
TACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCCAGTAA
AAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAAAAGAA
AGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCTATG
CGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTATAG
TTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAATAAGC
GTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTCTTA
AACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAAAA
GATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGTCG
GATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTATTTG
AATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAATGT
CGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTGAGTT
TATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAAAGAG
GAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAATACTA
TGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTATACTA
CCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAGG
ATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGACGC
TGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCCCTG
GAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGACTGAG
AGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTTG
TTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCCAGTA
AAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAAAAGA
AAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCTAT
GCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTATA
GTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAATAAG
CGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTCTT
AAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAAA
AGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGTC
GGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTATTT
GAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAATG
TCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTGAGT
TTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAAAGA
GGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAATACT
ATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTATACT
ACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAAG
GATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGACG
CTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCCCT
GGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGACTGA
GAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCTT
GTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCCAGT
AAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAAAAG
AAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCTA
TGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTAT
AGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAATAA
GCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTCT
TAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGAA
AAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATGT
CGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTATT
TGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAAT
GTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTGAG
TTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAAAG
AGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAATAC
TATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTATAC
TACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAAA
GGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGAC
GCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCCC
TGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGACTG
AGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTCT
TGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCCAG
TAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAAAA
GAAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACCT
ATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCTA
TAGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAATA
AGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACTC
TTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAGA
AAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAATG
TCGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTAT
TTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAAA
TGTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTGA
GTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAAA
GAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAATA
CTATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTATA
CTACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAAA
AGGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAGA
CGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATCC
CTGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGACT
GAGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCTC
TTGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCCA
GTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAAA
AGAAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGACC
TATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCCT
ATAGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAAT
AAGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAACT
CTTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAAG
AAAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAAT
GTCGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACTA
TTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTAA
ATGTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGTG
AGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTAA
AGAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAAT
ACTATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTAT
ACTACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAAA
AAGGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAAG
ACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAATC
CCTGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGAC
TGAGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTCT
CTTGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGCC
AGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAAA
AAGAAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGAC
CTATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTCC
TATAGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAAA
TAAGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAAC
TCTTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCAA
GAAAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGAA
TGTCGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGACT
ATTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTTA
AATGTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAGT
GAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGTA
AAGAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAAA
TACTATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCTA
TACTACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAAA
AAAGGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGAA
GACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAAT
CCCTGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGGA
CTGAGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTTC
TCTTGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAGC
CAGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCAA
AAAGAAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAGA
CCTATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGTC
CTATAGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCAA
ATAAGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGAA
CTCTTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATCA
AGAAAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAGA
ATGTCGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGAC
TATTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATTT
AAATGTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTAG
TGAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGGT
AAAGAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATAA
ATACTATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATCT
ATACTACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGAA
AAAAGGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAGA
AGACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAAA
TCCCTGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAGG
ACTGAGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTTT
CTCTTGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCAG
CCAGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGCA
AAAAGAAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAAG
ACCTATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTGT
CCTATAGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGCA
AATAAGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTGA
ACTCTTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGATC
AAGAAAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAAG
AATGTCGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAGA
CTATTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGATT
TAAATGTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCTA
GTGAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGGG
TAAAGAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGATA
AATACTATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCATC
TATACTACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAGA
AAAAAGGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAAG
AAGACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGAA
ATCCCTGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCAG
GACTGAGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTTT
TCTCTTGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGCA
GCCAGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGGC
AAAAAGAAAGGCGTATCGATTATTTCATTCTATCGAAATCATTGGAAGAA
GACCTATGCGATAGCATCATGCGTACCAAAGTTATGGGTAGTGACCATTG
TCCTATAGTTGCTACTTTTGCTATAAAGTAAATATTGCCAACCCTAAAGC
AAATAAGCGTAATTCTGGATTCACTGATGAAGAACGAGGAGACATGACTG
AACTCTTAAACGAAGGTTACATTGACTCGTACCGCTCCTTATACCCTGAT
CAAGAAAAGATGTATACTTTTTGGACGTACATGGCAAATGCAAGAGCAAA
GAATGTCGGATGACTTGATTACAGGCGAAGTTGGAACACAGATTTGAAAG
ACTATTTGAATAAACTAAAAGAAAAGAAACCAGTTGTCTTTTGTGGAGAT
TTAAATGTCGCTCACCAAGAAATAGATGTGCCAAACTCTGGAAAGAAGCT
AGTGAGTTTATGGTCAAAAACAAAGCCAGTCAGCATAAAGAATGGAATGG
GTAAAGAGGAACATGATAATGAAGGACGTCTGATTACTGCTGAATTTGAT
AAATACTATGTTGTAACATCATGTTACTCAATTGGACAAGAAAGTGCCAT
CTATACTACCAAAGAAAGACGGATATTACATGTATTGGTATGAGGCTGAG
AAAAAAGGATATAGTGGTGTCAGAAAGCTGGTCTTGATTACATTAAGGAA
GAAGACGCTGATATAGTTTGTTTACAAGAAACCAAAGTCACAGAAAAAGA
AATCCCTGGAGAGGGATTCAAATTTGAAGATTTGTAGTTGGAATGTAGCA
GGACTGAGAGCATGTCTAAAGGAGAAAGAAAACGATCAAAAGGAAAACTT
TTCTCTTGTTACAAAAACTAAAGATGGAAGAGCACTGAAGGTGAACAGGC
AGCCAGTAAAAAGTCCAAAAAAGAAGATGAAAAGGTTGATGAAGTTATGG
CAAAAAGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037500XLOC_037500Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059618-proteinTCONS_00059618-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059618-exon-scaffold_329-1575043694:756834..757275TCONS_00059618-exon-scaffold_329-1575043694:756834..757275Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:756619..756684TCONS_00059618-exon-scaffold_329-1575043694:756619..756684Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:756270..756328TCONS_00059618-exon-scaffold_329-1575043694:756270..756328Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:756025..756082TCONS_00059618-exon-scaffold_329-1575043694:756025..756082Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:755571..755660TCONS_00059618-exon-scaffold_329-1575043694:755571..755660Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:755159..755259TCONS_00059618-exon-scaffold_329-1575043694:755159..755259Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:754778..754893TCONS_00059618-exon-scaffold_329-1575043694:754778..754893Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:754407..754437TCONS_00059618-exon-scaffold_329-1575043694:754407..754437Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:753088..753200TCONS_00059618-exon-scaffold_329-1575043694:753088..753200Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:751401..751581TCONS_00059618-exon-scaffold_329-1575043694:751401..751581Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1575043694:750344..750590TCONS_00059618-exon-scaffold_329-1575043694:750344..750590Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:756834..757275TCONS_00059618-exon-scaffold_329-1510915933:756834..757275Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:756619..756684TCONS_00059618-exon-scaffold_329-1510915933:756619..756684Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:756270..756328TCONS_00059618-exon-scaffold_329-1510915933:756270..756328Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:756025..756082TCONS_00059618-exon-scaffold_329-1510915933:756025..756082Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:755571..755660TCONS_00059618-exon-scaffold_329-1510915933:755571..755660Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:755159..755259TCONS_00059618-exon-scaffold_329-1510915933:755159..755259Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:754778..754893TCONS_00059618-exon-scaffold_329-1510915933:754778..754893Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:754407..754437TCONS_00059618-exon-scaffold_329-1510915933:754407..754437Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:753088..753200TCONS_00059618-exon-scaffold_329-1510915933:753088..753200Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:751401..751581TCONS_00059618-exon-scaffold_329-1510915933:751401..751581Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1510915933:750344..750590TCONS_00059618-exon-scaffold_329-1510915933:750344..750590Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:756834..757275TCONS_00059618-exon-scaffold_329-1491911889:756834..757275Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:756619..756684TCONS_00059618-exon-scaffold_329-1491911889:756619..756684Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:756270..756328TCONS_00059618-exon-scaffold_329-1491911889:756270..756328Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:756025..756082TCONS_00059618-exon-scaffold_329-1491911889:756025..756082Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:755571..755660TCONS_00059618-exon-scaffold_329-1491911889:755571..755660Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:755159..755259TCONS_00059618-exon-scaffold_329-1491911889:755159..755259Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:754778..754893TCONS_00059618-exon-scaffold_329-1491911889:754778..754893Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:754407..754437TCONS_00059618-exon-scaffold_329-1491911889:754407..754437Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:753088..753200TCONS_00059618-exon-scaffold_329-1491911889:753088..753200Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:751401..751581TCONS_00059618-exon-scaffold_329-1491911889:751401..751581Clytia hemisphaericaexon
TCONS_00059618-exon-scaffold_329-1491911889:750344..750590TCONS_00059618-exon-scaffold_329-1491911889:750344..750590Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:750344..757275 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.1169	56.0677	108.415	117.814	11.3226	9.72214	16.0594	16.4295	21.0124	14.5328	15.6929	15.2096	13.7063	13.6471	15.4761	14.6393	20.877	19.0548	9.64137	10.3757	16.438	14.6795	30.2352	28.2903	31.9994	33.6262	9.06767	6.66549	16.752	19.2691
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004808AP_endonuc_1
IPR005135Endo/exonuclease/phosphatase
IPR020847AP_endonuclease_F1_BS
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0004519endonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
cellular_component GO:0005622 intracellular
molecular_function GO:0003677 DNA binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0004518 nuclease activity
Blast
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BLAST of TCONS_00059618 vs. Swiss-Prot (Human)
Match: APEX1 (DNA-(apurinic or apyrimidinic site) lyase OS=Homo sapiens GN=APEX1 PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.130e-100
Identity = 146/275 (53.09%), Postives = 194/275 (70.55%), Query Frame = 2 
Query:  554 TKDGRDSNLKICSWNVAGLRACLKKAGLDYIKEEDADIVCLQETKVTEKEIPGEVTQLDKKVPSILPKKDGYYMYW-YEAEKKGYSGVSLWSKTKPVSIKNGMGKEEHDNEGRLITAEFDKYYVVTSYVPNSGKKLVRLDYRRSWNTDLKDYLNKLKEKKPVVFCGDLNVAHQEIDIANPKANKRNSGFTDEERGDMTELLNE-GYIDSYRSLYPDQEKMYTFWTYMANARAKNVGWRIDYFILSKSLEEDLCDSIMRTKVMGSDHCPIVATFAI 1372
            +  G+ + LKICSWNV GLRA +KK GLD++KEE  DI+CLQETK +E ++P E+ +L    P +       + YW   ++K+GYSGV L S+  P+ +  G+G EEHD EGR+I AEFD + +VT+YVPN+G+ LVRL+YR+ W+   + +L  L  +KP+V CGDLNVAH+EID+ NPK NK+N+GFT +ER    ELL      DS+R LYP+    YTFWTYM NAR+KNVGWR+DYF+LS SL   LCDS +R+K +GSDHCPI    A+
Sbjct:   54 SPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQEL----PGL------SHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL 318
The following BLAST results are available for this feature:
BLAST of TCONS_00059618 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APEX11.130e-10053.09DNA-(apurinic or apyrimidinic site) lyase OS=Homo ... [more]
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