TCONS_00056155 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056155
Unique NameTCONS_00056155
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2273

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056155 ID=TCONS_00056155|Name=TCONS_00056155|organism=Clytia hemisphaerica|type=transcript|length=2273bp
cttcatcatcatcttcCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGA
CAACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCC
AAAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGC
TGATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACAC
CAGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAG
TTTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCACATAACGC
AGAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACATGTCCTG
GTAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTTTcgagat
gatgatgatgatggaatcGATATGATCTCATCCTGTTCATCTGCATCTGA
AATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCACACGTAA
CTATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGGACACGGAGGT
TTTGATGGACCAATCATGCCTCGTGCTGATATCTTCTTGCCACCAAAAAT
GGAGAACGACATTTCGTTAGAAGATTTAGATAGTTATTCACACGATGGAG
ACGTTGAACCTCACATTCCCAAATGTCGTGCTCCACCACAAGAGGACTTG
TACTTCATGTACAAAAAACTCTTAACGGATCCCTTTAGGAACACAAAACC
TGTCATTGATTTGAGGCCAACAACCTCCAGTTTAAGCCTTATTTCATCTG
ACACGGTCTTTGATTGGCCAGTTCGGGAAAGATTTGAGGTCCCCTATGTA
GAGCCAACAAAACTTCCGCCCATTGGTTATGGGTTTCACCACGCAAATAC
CAGGCAAGAGAATATGGTCGGCCGGCTTAATCGTTTTCAGACGGACAGAG
AATCCTTAAGAAACCAACCGCTTAAGTTTCCAAGCATTATTCAAATGAAC
AACTTGAATGCTCAATTAAGAACAATGTCAAGATCGAGCACTGCATGCTC
TGGTAGTATTAACGATTCGTATTCAAGAAGTTCTTCCAGATCCTCCTATT
CATCGGCTAGAAGCAAAGGCCAAACAGCCCAAAGTTATATCAATAATATA
AAAGAGAACCAATGCACCTGGACAAAGAATGAACAGATTAATCTAAAAGG
GGAGAAACGGATTAGACGGAAACTTTTGGACGGCGCATATCCGAACTCCA
CGGTAAAGGAGGATAAACTACCTACACTTTTAAGGTTTGTCTGGAAGGGC
AAACACAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGCACAAAAA
GATCAATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCTT
CTTGGGCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAGAGGAATT
GACGTTAACATAAAAGACCAACATCACAAAACGCCTTTATTTAAAGCGAT
CGACATGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCCA
AGGCCCGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCTC
ACGGAATATGGCGATGATGCTtttgaaataattgattttttttataatgg
gcGTGGTATCCGTGATATCGACATGGGGAGCAATGGAATGTCTTTACTCC
ATCAAGCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGTCATCAAG
ATGATTCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATAA
AAGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCCAGACCTCTTAT
TGGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACGACTCGTTTATG
AAAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGCTACAAAATATT
GCAAGGTTTCAAAGTTAataaaaagacgggaaaacgaaTATTTAAATATC
GACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACGTCAAGGCTAAG
GACAATAATCAACGTGGTTCTACACCACCTAAACAAAAGGGACAAAAAGA
CGCTCCTTATAATATCAACCCTAAGATGGATGACCCAGAGTATCGAGCAC
ATATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGCCCAAACGGGAA
GATCTTTATTACGATCCACTAAGCATTTAattctattttttcttctttct
aaatactattcaatttattttat
Run BLAST on NCBI

protein sequence of TCONS_00056155-protein

>TCONS_00056155-protein ID=TCONS_00056155-protein|Name=TCONS_00056155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=742bp
FIIIFLFEMGLKKKLKTTFTRKTNSRKEKRKEAKKRSRTLQGSNVSLSIA
DVYDQLYEEHETGKQTPVPLSETRLPGSRPNDKFQDIETSELQIIPSHNA
EVAQKRPRTARVLTCPGNLPAPTRTQTRMRFRDDDDDGIDMISSCSSASE
ISIKSFHSDSTISPHVTIVAPFTPRFSRMGHGGFDGPIMPRADIFLPPKM
ENDISLEDLDSYSHDGDVEPHIPKCRAPPQEDLYFMYKKLLTDPFRNTKP
VIDLRPTTSSLSLISSDTVFDWPVRERFEVPYVEPTKLPPIGYGFHHANT
RQENMVGRLNRFQTDRESLRNQPLKFPSIIQMNNLNAQLRTMSRSSTACS
GSINDSYSRSSSRSSYSSARSKGQTAQSYINNIKENQCTWTKNEQINLKG
EKRIRRKLLDGAYPNSTVKEDKLPTLLRFVWKGKHKKLKNYLNDASKHKK
INRTDKFGRTALHFAASWADYRMLKILLDVRGIDVNIKDQHHKTPLFKAI
DMKSLACVRLLVHAGAKARVTCSDERNALEYALTEYGDDAFEIIDFFYNG
RGIRDIDMGSNGMSLLHQAVVTKKHVTNVKVIKMILEPGLVDVNAVEGDK
RTPLILAAQSKRPDLLLALLENGADPKHYDSFMKNAICYTEKDSTCYKIL
QGFKVNKKTGKRIFKYRPDGQLATVQAINVKAKDNNQRGSTPPKQKGQKD
APYNINPKMDDPEYRAHITSLFTASKFKEPKREDLYYDPLSI
Run BLAST on NCBI

transcript from alignment at scaffold_268:149511..152844+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056155 ID=TCONS_00056155|Name=TCONS_00056155|organism=Clytia hemisphaerica|type=transcript|length=3334bp|location=Sequence derived from alignment at scaffold_268:149511..152844+ (Clytia hemisphaerica)
cttcatcatcatcttcCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGA
CAACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCC
AAAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGC
TGATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACAC
CAGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAG
TTTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCACATAACGC
AGAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACATGTCCTG
GTAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTTTcgagat
gatgatgatgatggaatcGATATGATCTCATCCTGTTCATCTGCATCTGA
AATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCACACGTAA
CTATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGGTAAGATAATT
CTTTGCAAAACTGACCGATACTGTTGTAGCTACATATCATAAATGAATTG
GAAACTTTTTTCGTTTATCAGAGTTTCTTGAAGTTATTACTTTCTGAGTT
ATCTTCAAATCGTTTAGATTTTTGACGAATGAGTGATGCAATTCCAAGCA
AGTTTGGGTCTTGTTGAAATTTTCTGAATATCACAAGTTGCCATTTTTCT
TGCAAAGTACTTTGAGTTTTTAGTCAACTCCTCACCCAACTCTTCTTCAT
GGCTTAGGTTTTGAttgttaaaataaaacacatTAAATTCTATACTAGGA
CACGGAGGTTTTGATGGACCAATCATGCCTCGTGCTGATATCTTCTTGCC
ACCAAAAATGGAGAACGACATTTCGTTAGAAGATTTAGATAGTTATTCAC
ACGATGGAGACGTTGAACCTCACATTCCCAAATGTCGTGCTCCACCACAA
GAGGACTTGTACTTCATGTACAAAAAACTCTTAACGGATCCCTTTAGGAA
CACAAAACCTGTCATTGATTTGAGGCCAACAACCTCCAGTTTAAGCCTTA
TTTCATCTGACACGGTCTTTGATTGGCCAGTTCGGGAAAGATTTGAGGTC
CCCTATGTAGAGCCAACAAAACTTCCGCCCATTGGTTATGGGTTTCACCA
CGCAAATACCAGGCAAGAGAATATGGTCGGCCGGCTTAATCGTTTTCAGA
CGGACAGAGAATCCTTAAGAAACCAACCGCTTAAGTTTCCAAGCATTATT
CAAATGAACAACTTGAATGCTCAATTAAGAACAATGTCAAGATCGAGCAC
TGCATGCTCTGGTAGTATTAACGATTCGTATTCAAGAAGTTCTTCCAGAT
CCTCCTATTCATCGGCTAGAAGCAAAGGCCAAACAGCCCAAAGTTATATC
AATAATATAAAAGAGAACCAATGCACCTGGACAAAGAATGAACAGATTAA
TCTAAAAGGGGAGAAACGGATTAGACGGAAACTTTTGGACGGCGCATATC
CGAACTCCACGGTAAAGGAGGATAAACTACCTACACTTTTAAGGTGAGAA
TTCAAACTTCATAGTTATTTCTTCGTCCTCGAAACTCATGCTTAATACTC
CTGTCTCAGTAATCCAGCGAGATAGTGGGGACAATAGCTCGAAAATCCAG
TCATAATTATCAAACTTGTATAGTGTATTTCATATTTGAGACGATATTAT
AGTGCAGCTTTCGCACGAGGTGAAATTCCTTcccttcttatttttttgga
gaAGGTTCCAACAGATAGGTTACACGGAGGGCTCTAAGTGGCCCGTCTCG
TCTGTTCTTATTCTTGATATTCTACATATATCTTTGAAAGACAAAATTTA
AAGTGAAGATGGATCCAGTTTATTTCCGTTCGCTTTAATCTTTCTGGTAT
CTTTCAAATTTCGTTGCTTTTCATCTTCAGGTTTGTCTGGAAGGGCAAAC
ACAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGCACAAAAAGATC
AATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCTTCTTG
GGCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAGAGGAATTGACG
TTAACATAAAAGACCAACATCACAAAACGCCTTTATTTAAAGCGATCGAC
ATGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCCAAGGC
CCGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCTCACGG
AATATGGCGATGATGCTtttgaaataattgattttttttataatgggcGT
GGTATCCGTGATATCGACATGGGGAGCAATGGAATGTCTTTACTCCATCA
AGCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGTCATCAAGATGA
TTCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATAAAAGG
TAAAGTGTAATATTTAGTCCGTGGTTTATTCTTTAATTTTTCCATTTAAT
AAGTAATGATAGCAAAATCTTTCTAGATCGGAGTTAAAAGACATCGGGAA
TCTTTTGCTAAAGAATTTTTGAATTCATTGCGCGAAAATTCCCACCAATA
AAGACGGATTGGAGATACAGATACAGATTGGAGTCTAATTTGAGTCTAAG
TGATAATATTATAGGATattatttttatcacttttGATAATTCCCTTCAC
ACATAAAGCCCACATGTTGTTAGGGTATCCGCTTTTGAACAAGCAGTGAT
AAGCGAGCATTCTGTATTAACAGGAaattttcctttcaataaactttttc
tCTCTGTATTTTAGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCC
AGACCTCTTATTGGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACG
ACTCGTTTATGAAAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGC
TACAAAATATTGCAAGGTTTCAAAGTTAataaaaagacgggaaaacgaaT
ATTTAAATATCGACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACG
TCAAGGCTAAGGACAATAATCAACGTGGTTCTACACCACCTAAACAAAAG
GGACAAAAAGACGCTCCTTATAATATCAACCCTAAGATGGATGACCCAGA
GTATCGAGCACATATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGC
CCAAACGGGAAGATCTTTATTACGATCCACTAAGCATTTAattctatttt
ttcttctttctaaatactattcaatttattttat

Coding sequence (CDS) from alignment at scaffold_268:149511..152844+

>TCONS_00056155 ID=TCONS_00056155|Name=TCONS_00056155|organism=Clytia hemisphaerica|type=CDS|length=8916bp|location=Sequence derived from alignment at scaffold_268:149511..152844+ (Clytia hemisphaerica)
ttcatcatcatcttcCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGAC
AACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCCA
AAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGCT
GATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACACC
AGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAGT
TTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCACATAACGCA
GAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACATGTCCTGG
TAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTTTcgagatg
atgatgatgatggaatcGATATGATCTCATCCTGTTCATCTGCATCTGAA
ATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCACACGTAAC
TATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGGACACGGAGGTT
TTGATGGACCAATCATGCCTCGTGCTGATATCTTCTTGCCACCAAAAATG
GAGAACGACATTTCGTTAGAAGATTTAGATAGTTATTCACACGATGGAGA
CGTTGAACCTCACATTCCCAAATGTCGTGCTCCACCACAAGAGGACTTGT
ACTTCATGTACAAAAAACTCTTAACGGATCCCTTTAGGAACACAAAACCT
GTCATTGATTTGAGGCCAACAACCTCCAGTTTAAGCCTTATTTCATCTGA
CACGGTCTTTGATTGGCCAGTTCGGGAAAGATTTGAGGTCCCCTATGTAG
AGCCAACAAAACTTCCGCCCATTGGTTATGGGTTTCACCACGCAAATACC
AGGCAAGAGAATATGGTCGGCCGGCTTAATCGTTTTCAGACGGACAGAGA
ATCCTTAAGAAACCAACCGCTTAAGTTTCCAAGCATTATTCAAATGAACA
ACTTGAATGCTCAATTAAGAACAATGTCAAGATCGAGCACTGCATGCTCT
GGTAGTATTAACGATTCGTATTCAAGAAGTTCTTCCAGATCCTCCTATTC
ATCGGCTAGAAGCAAAGGCCAAACAGCCCAAAGTTATATCAATAATATAA
AAGAGAACCAATGCACCTGGACAAAGAATGAACAGATTAATCTAAAAGGG
GAGAAACGGATTAGACGGAAACTTTTGGACGGCGCATATCCGAACTCCAC
GGTAAAGGAGGATAAACTACCTACACTTTTAAGGTTTGTCTGGAAGGGCA
AACACAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGCACAAAAAG
ATCAATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCTTC
TTGGGCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAGAGGAATTG
ACGTTAACATAAAAGACCAACATCACAAAACGCCTTTATTTAAAGCGATC
GACATGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCCAA
GGCCCGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCTCA
CGGAATATGGCGATGATGCTtttgaaataattgattttttttataatggg
cGTGGTATCCGTGATATCGACATGGGGAGCAATGGAATGTCTTTACTCCA
TCAAGCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGTCATCAAGA
TGATTCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATAAA
AGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCCAGACCTCTTATT
GGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACGACTCGTTTATGA
AAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGCTACAAAATATTG
CAAGGTTTCAAAGTTAataaaaagacgggaaaacgaaTATTTAAATATCG
ACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACGTCAAGGCTAAGG
ACAATAATCAACGTGGTTCTACACCACCTAAACAAAAGGGACAAAAAGAC
GCTCCTTATAATATCAACCCTAAGATGGATGACCCAGAGTATCGAGCACA
TATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGCCCAAACGGGAAG
ATCTTTATTACGATCCACTAAGCATTTAattcatcatcatcttcCTTTTC
GAAATGGGTTTAAAAAAGAAGTTGAAGACAACCTTCACGAGAAAGACAAA
CTCCCGTAAAGAAAAGAGGAAAGAGGCCAAAAAAAGAAGTAGAACATTGC
AAGGGAGTAATGTTTCCCTTTCGATTGCTGATGTTTATGACCAGCTCTAT
GAAGAGCACGAGACTGGGAAGCAGACACCAGTGCCCTTATCTGAGACCCG
TCTCCCTGGATCTCGCCCTAATGACAAGTTTCAAGACATCGAAACATCGG
AATTACAAATAATTCCATCACATAACGCAGAAGTGGCACAGAAACGACCA
CGCACGGCACGTGTCCTTACATGTCCTGGTAACCTACCAGCTCCAACACG
AACGCAAACCAGAATGAGGTTTcgagatgatgatgatgatggaatcGATA
TGATCTCATCCTGTTCATCTGCATCTGAAATATCCATCAAAAGTTTTCAC
TCAGACTCCACAATCAGTCCACACGTAACTATTGTTGCTCCCTTCACACC
GAGATTCTCTCGTATGGGACACGGAGGTTTTGATGGACCAATCATGCCTC
GTGCTGATATCTTCTTGCCACCAAAAATGGAGAACGACATTTCGTTAGAA
GATTTAGATAGTTATTCACACGATGGAGACGTTGAACCTCACATTCCCAA
ATGTCGTGCTCCACCACAAGAGGACTTGTACTTCATGTACAAAAAACTCT
TAACGGATCCCTTTAGGAACACAAAACCTGTCATTGATTTGAGGCCAACA
ACCTCCAGTTTAAGCCTTATTTCATCTGACACGGTCTTTGATTGGCCAGT
TCGGGAAAGATTTGAGGTCCCCTATGTAGAGCCAACAAAACTTCCGCCCA
TTGGTTATGGGTTTCACCACGCAAATACCAGGCAAGAGAATATGGTCGGC
CGGCTTAATCGTTTTCAGACGGACAGAGAATCCTTAAGAAACCAACCGCT
TAAGTTTCCAAGCATTATTCAAATGAACAACTTGAATGCTCAATTAAGAA
CAATGTCAAGATCGAGCACTGCATGCTCTGGTAGTATTAACGATTCGTAT
TCAAGAAGTTCTTCCAGATCCTCCTATTCATCGGCTAGAAGCAAAGGCCA
AACAGCCCAAAGTTATATCAATAATATAAAAGAGAACCAATGCACCTGGA
CAAAGAATGAACAGATTAATCTAAAAGGGGAGAAACGGATTAGACGGAAA
CTTTTGGACGGCGCATATCCGAACTCCACGGTAAAGGAGGATAAACTACC
TACACTTTTAAGGTTTGTCTGGAAGGGCAAACACAAGAAACTTAAAAATT
ATCTCAATGACGCCTCCAAGCACAAAAAGATCAATCGAACAGACAAGTTT
GGCCGCACGGCTTTACATTTTGCTGCTTCTTGGGCAGACTACAGGATGCT
GAAGATTTTATTGGACGTTAGAGGAATTGACGTTAACATAAAAGACCAAC
ATCACAAAACGCCTTTATTTAAAGCGATCGACATGAAGTCGCTTGCTTGT
GTTCGTCTATTGGTCCACGCTGGAGCCAAGGCCCGAGTCACATGTTCAGA
CGAGCGTAACGCCCTTGAGTACGCTCTCACGGAATATGGCGATGATGCTt
ttgaaataattgattttttttataatgggcGTGGTATCCGTGATATCGAC
ATGGGGAGCAATGGAATGTCTTTACTCCATCAAGCTGTGGTCACAAAAAA
ACACGTGACAAACGTAAAAGTCATCAAGATGATTCTGGAACCAGGTCTGG
TTGATGTGAACGCCGTTGAGGGTGATAAAAGGACCCCACTCATCTTAGCT
GCTCAATCCAAGCGTCCAGACCTCTTATTGGCCCTCTTAGAAAATGGTGC
AGACCCAAAACATTACGACTCGTTTATGAAAAACGCAATTTGCTACACCG
AGAAAGACTCCACTTGCTACAAAATATTGCAAGGTTTCAAAGTTAataaa
aagacgggaaaacgaaTATTTAAATATCGACCCGATGGGCAACTTGCAAC
TGTTCAAGCTATAAACGTCAAGGCTAAGGACAATAATCAACGTGGTTCTA
CACCACCTAAACAAAAGGGACAAAAAGACGCTCCTTATAATATCAACCCT
AAGATGGATGACCCAGAGTATCGAGCACATATCACCAGTCTGTTCACGGC
ATCCAAATTCAAGGAGCCCAAACGGGAAGATCTTTATTACGATCCACTAA
GCATTTAattcatcatcatcttcCTTTTCGAAATGGGTTTAAAAAAGAAG
TTGAAGACAACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAA
AGAGGCCAAAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTT
CGATTGCTGATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAG
CAGACACCAGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAA
TGACAAGTTTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCAC
ATAACGCAGAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACA
TGTCCTGGTAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTT
TcgagatgatgatgatgatggaatcGATATGATCTCATCCTGTTCATCTG
CATCTGAAATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCA
CACGTAACTATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGGACA
CGGAGGTTTTGATGGACCAATCATGCCTCGTGCTGATATCTTCTTGCCAC
CAAAAATGGAGAACGACATTTCGTTAGAAGATTTAGATAGTTATTCACAC
GATGGAGACGTTGAACCTCACATTCCCAAATGTCGTGCTCCACCACAAGA
GGACTTGTACTTCATGTACAAAAAACTCTTAACGGATCCCTTTAGGAACA
CAAAACCTGTCATTGATTTGAGGCCAACAACCTCCAGTTTAAGCCTTATT
TCATCTGACACGGTCTTTGATTGGCCAGTTCGGGAAAGATTTGAGGTCCC
CTATGTAGAGCCAACAAAACTTCCGCCCATTGGTTATGGGTTTCACCACG
CAAATACCAGGCAAGAGAATATGGTCGGCCGGCTTAATCGTTTTCAGACG
GACAGAGAATCCTTAAGAAACCAACCGCTTAAGTTTCCAAGCATTATTCA
AATGAACAACTTGAATGCTCAATTAAGAACAATGTCAAGATCGAGCACTG
CATGCTCTGGTAGTATTAACGATTCGTATTCAAGAAGTTCTTCCAGATCC
TCCTATTCATCGGCTAGAAGCAAAGGCCAAACAGCCCAAAGTTATATCAA
TAATATAAAAGAGAACCAATGCACCTGGACAAAGAATGAACAGATTAATC
TAAAAGGGGAGAAACGGATTAGACGGAAACTTTTGGACGGCGCATATCCG
AACTCCACGGTAAAGGAGGATAAACTACCTACACTTTTAAGGTTTGTCTG
GAAGGGCAAACACAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGC
ACAAAAAGATCAATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTT
GCTGCTTCTTGGGCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAG
AGGAATTGACGTTAACATAAAAGACCAACATCACAAAACGCCTTTATTTA
AAGCGATCGACATGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCT
GGAGCCAAGGCCCGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTA
CGCTCTCACGGAATATGGCGATGATGCTtttgaaataattgatttttttt
ataatgggcGTGGTATCCGTGATATCGACATGGGGAGCAATGGAATGTCT
TTACTCCATCAAGCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGT
CATCAAGATGATTCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGG
GTGATAAAAGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCCAGAC
CTCTTATTGGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACGACTC
GTTTATGAAAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGCTACA
AAATATTGCAAGGTTTCAAAGTTAataaaaagacgggaaaacgaaTATTT
AAATATCGACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACGTCAA
GGCTAAGGACAATAATCAACGTGGTTCTACACCACCTAAACAAAAGGGAC
AAAAAGACGCTCCTTATAATATCAACCCTAAGATGGATGACCCAGAGTAT
CGAGCACATATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGCCCAA
ACGGGAAGATCTTTATTACGATCCACTAAGCATTTAattcatcatcatct
tcCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGACAACCTTCACGAGA
AAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCCAAAAAAAGAAGTAG
AACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGCTGATGTTTATGACC
AGCTCTATGAAGAGCACGAGACTGGGAAGCAGACACCAGTGCCCTTATCT
GAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAGTTTCAAGACATCGA
AACATCGGAATTACAAATAATTCCATCACATAACGCAGAAGTGGCACAGA
AACGACCACGCACGGCACGTGTCCTTACATGTCCTGGTAACCTACCAGCT
CCAACACGAACGCAAACCAGAATGAGGTTTcgagatgatgatgatgatgg
aatcGATATGATCTCATCCTGTTCATCTGCATCTGAAATATCCATCAAAA
GTTTTCACTCAGACTCCACAATCAGTCCACACGTAACTATTGTTGCTCCC
TTCACACCGAGATTCTCTCGTATGGGACACGGAGGTTTTGATGGACCAAT
CATGCCTCGTGCTGATATCTTCTTGCCACCAAAAATGGAGAACGACATTT
CGTTAGAAGATTTAGATAGTTATTCACACGATGGAGACGTTGAACCTCAC
ATTCCCAAATGTCGTGCTCCACCACAAGAGGACTTGTACTTCATGTACAA
AAAACTCTTAACGGATCCCTTTAGGAACACAAAACCTGTCATTGATTTGA
GGCCAACAACCTCCAGTTTAAGCCTTATTTCATCTGACACGGTCTTTGAT
TGGCCAGTTCGGGAAAGATTTGAGGTCCCCTATGTAGAGCCAACAAAACT
TCCGCCCATTGGTTATGGGTTTCACCACGCAAATACCAGGCAAGAGAATA
TGGTCGGCCGGCTTAATCGTTTTCAGACGGACAGAGAATCCTTAAGAAAC
CAACCGCTTAAGTTTCCAAGCATTATTCAAATGAACAACTTGAATGCTCA
ATTAAGAACAATGTCAAGATCGAGCACTGCATGCTCTGGTAGTATTAACG
ATTCGTATTCAAGAAGTTCTTCCAGATCCTCCTATTCATCGGCTAGAAGC
AAAGGCCAAACAGCCCAAAGTTATATCAATAATATAAAAGAGAACCAATG
CACCTGGACAAAGAATGAACAGATTAATCTAAAAGGGGAGAAACGGATTA
GACGGAAACTTTTGGACGGCGCATATCCGAACTCCACGGTAAAGGAGGAT
AAACTACCTACACTTTTAAGGTTTGTCTGGAAGGGCAAACACAAGAAACT
TAAAAATTATCTCAATGACGCCTCCAAGCACAAAAAGATCAATCGAACAG
ACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCTTCTTGGGCAGACTAC
AGGATGCTGAAGATTTTATTGGACGTTAGAGGAATTGACGTTAACATAAA
AGACCAACATCACAAAACGCCTTTATTTAAAGCGATCGACATGAAGTCGC
TTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCCAAGGCCCGAGTCACA
TGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCTCACGGAATATGGCGA
TGATGCTtttgaaataattgattttttttataatgggcGTGGTATCCGTG
ATATCGACATGGGGAGCAATGGAATGTCTTTACTCCATCAAGCTGTGGTC
ACAAAAAAACACGTGACAAACGTAAAAGTCATCAAGATGATTCTGGAACC
AGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATAAAAGGACCCCACTCA
TCTTAGCTGCTCAATCCAAGCGTCCAGACCTCTTATTGGCCCTCTTAGAA
AATGGTGCAGACCCAAAACATTACGACTCGTTTATGAAAAACGCAATTTG
CTACACCGAGAAAGACTCCACTTGCTACAAAATATTGCAAGGTTTCAAAG
TTAataaaaagacgggaaaacgaaTATTTAAATATCGACCCGATGGGCAA
CTTGCAACTGTTCAAGCTATAAACGTCAAGGCTAAGGACAATAATCAACG
TGGTTCTACACCACCTAAACAAAAGGGACAAAAAGACGCTCCTTATAATA
TCAACCCTAAGATGGATGACCCAGAGTATCGAGCACATATCACCAGTCTG
TTCACGGCATCCAAATTCAAGGAGCCCAAACGGGAAGATCTTTATTACGA
TCCACTAAGCATTTAa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035354XLOC_035354Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056155-exon-scaffold_268-1491911889:149511..150049TCONS_00056155-exon-scaffold_268-1491911889:149511..150049Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1510915933:149511..150049TCONS_00056155-exon-scaffold_268-1510915933:149511..150049Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1575043694:149511..150049TCONS_00056155-exon-scaffold_268-1575043694:149511..150049Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1491911889:150359..151103TCONS_00056155-exon-scaffold_268-1491911889:150359..151103Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1510915933:150359..151103TCONS_00056155-exon-scaffold_268-1510915933:150359..151103Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1575043694:150359..151103TCONS_00056155-exon-scaffold_268-1575043694:150359..151103Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1491911889:151491..152009TCONS_00056155-exon-scaffold_268-1491911889:151491..152009Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1510915933:151491..152009TCONS_00056155-exon-scaffold_268-1510915933:151491..152009Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1575043694:151491..152009TCONS_00056155-exon-scaffold_268-1575043694:151491..152009Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1491911889:152375..152844TCONS_00056155-exon-scaffold_268-1491911889:152375..152844Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1510915933:152375..152844TCONS_00056155-exon-scaffold_268-1510915933:152375..152844Clytia hemisphaericaexon
TCONS_00056155-exon-scaffold_268-1575043694:152375..152844TCONS_00056155-exon-scaffold_268-1575043694:152375..152844Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056155-proteinTCONS_00056155-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:149511..152844 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.429721	0.469331	0.272469	0.133284	0.0231801	0.0366344	0	0	0	0	0.0348292	0	0.0114318	0.023744	0.00976038	0.0104744	0	0	0.109633	0.0573613	0	0	0.0591251	0.0537533	0.184549	0.181176	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top