XLOC_035354 (gene) - C. hemisphaerica

Overview
NameXLOC_035354
Unique NameXLOC_035354
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_268:149511..152844+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035354 ID=XLOC_035354|Name=XLOC_035354|organism=Clytia hemisphaerica|type=gene|length=3334bp|location=Sequence derived from alignment at scaffold_268:149511..152844+ (Clytia hemisphaerica)
cttcatcatcatcttcCTTTTCGAAATGGGTTTAAAAAAGAAGTTGAAGA
CAACCTTCACGAGAAAGACAAACTCCCGTAAAGAAAAGAGGAAAGAGGCC
AAAAAAAGAAGTAGAACATTGCAAGGGAGTAATGTTTCCCTTTCGATTGC
TGATGTTTATGACCAGCTCTATGAAGAGCACGAGACTGGGAAGCAGACAC
CAGTGCCCTTATCTGAGACCCGTCTCCCTGGATCTCGCCCTAATGACAAG
TTTCAAGACATCGAAACATCGGAATTACAAATAATTCCATCACATAACGC
AGAAGTGGCACAGAAACGACCACGCACGGCACGTGTCCTTACATGTCCTG
GTAACCTACCAGCTCCAACACGAACGCAAACCAGAATGAGGTTTcgagat
gatgatgatgatggaatcGATATGATCTCATCCTGTTCATCTGCATCTGA
AATATCCATCAAAAGTTTTCACTCAGACTCCACAATCAGTCCACACGTAA
CTATTGTTGCTCCCTTCACACCGAGATTCTCTCGTATGGGTAAGATAATT
CTTTGCAAAACTGACCGATACTGTTGTAGCTACATATCATAAATGAATTG
GAAACTTTTTTCGTTTATCAGAGTTTCTTGAAGTTATTACTTTCTGAGTT
ATCTTCAAATCGTTTAGATTTTTGACGAATGAGTGATGCAATTCCAAGCA
AGTTTGGGTCTTGTTGAAATTTTCTGAATATCACAAGTTGCCATTTTTCT
TGCAAAGTACTTTGAGTTTTTAGTCAACTCCTCACCCAACTCTTCTTCAT
GGCTTAGGTTTTGAttgttaaaataaaacacatTAAATTCTATACTAGGA
CACGGAGGTTTTGATGGACCAATCATGCCTCGTGCTGATATCTTCTTGCC
ACCAAAAATGGAGAACGACATTTCGTTAGAAGATTTAGATAGTTATTCAC
ACGATGGAGACGTTGAACCTCACATTCCCAAATGTCGTGCTCCACCACAA
GAGGACTTGTACTTCATGTACAAAAAACTCTTAACGGATCCCTTTAGGAA
CACAAAACCTGTCATTGATTTGAGGCCAACAACCTCCAGTTTAAGCCTTA
TTTCATCTGACACGGTCTTTGATTGGCCAGTTCGGGAAAGATTTGAGGTC
CCCTATGTAGAGCCAACAAAACTTCCGCCCATTGGTTATGGGTTTCACCA
CGCAAATACCAGGCAAGAGAATATGGTCGGCCGGCTTAATCGTTTTCAGA
CGGACAGAGAATCCTTAAGAAACCAACCGCTTAAGTTTCCAAGCATTATT
CAAATGAACAACTTGAATGCTCAATTAAGAACAATGTCAAGATCGAGCAC
TGCATGCTCTGGTAGTATTAACGATTCGTATTCAAGAAGTTCTTCCAGAT
CCTCCTATTCATCGGCTAGAAGCAAAGGCCAAACAGCCCAAAGTTATATC
AATAATATAAAAGAGAACCAATGCACCTGGACAAAGAATGAACAGATTAA
TCTAAAAGGGGAGAAACGGATTAGACGGAAACTTTTGGACGGCGCATATC
CGAACTCCACGGTAAAGGAGGATAAACTACCTACACTTTTAAGGTGAGAA
TTCAAACTTCATAGTTATTTCTTCGTCCTCGAAACTCATGCTTAATACTC
CTGTCTCAGTAATCCAGCGAGATAGTGGGGACAATAGCTCGAAAATCCAG
TCATAATTATCAAACTTGTATAGTGTATTTCATATTTGAGACGATATTAT
AGTGCAGCTTTCGCACGAGGTGAAATTCCTTcccttcttatttttttgga
gaAGGTTCCAACAGATAGGTTACACGGAGGGCTCTAAGTGGCCCGTCTCG
TCTGTTCTTATTCTTGATATTCTACATATATCTTTGAAAGACAAAATTTA
AAGTGAAGATGGATCCAGTTTATTTCCGTTCGCTTTAATCTTTCTGGTAT
CTTTCAAATTTCGTTGCTTTTCATCTTCAGGTTTGTCTGGAAGGGCAAAC
ACAAGAAACTTAAAAATTATCTCAATGACGCCTCCAAGCACAAAAAGATC
AATCGAACAGACAAGTTTGGCCGCACGGCTTTACATTTTGCTGCTTCTTG
GGCAGACTACAGGATGCTGAAGATTTTATTGGACGTTAGAGGAATTGACG
TTAACATAAAAGACCAACATCACAAAACGCCTTTATTTAAAGCGATCGAC
ATGAAGTCGCTTGCTTGTGTTCGTCTATTGGTCCACGCTGGAGCCAAGGC
CCGAGTCACATGTTCAGACGAGCGTAACGCCCTTGAGTACGCTCTCACGG
AATATGGCGATGATGCTtttgaaataattgattttttttataatgggcGT
GGTATCCGTGATATCGACATGGGGAGCAATGGAATGTCTTTACTCCATCA
AGCTGTGGTCACAAAAAAACACGTGACAAACGTAAAAGTCATCAAGATGA
TTCTGGAACCAGGTCTGGTTGATGTGAACGCCGTTGAGGGTGATAAAAGG
TAAAGTGTAATATTTAGTCCGTGGTTTATTCTTTAATTTTTCCATTTAAT
AAGTAATGATAGCAAAATCTTTCTAGATCGGAGTTAAAAGACATCGGGAA
TCTTTTGCTAAAGAATTTTTGAATTCATTGCGCGAAAATTCCCACCAATA
AAGACGGATTGGAGATACAGATACAGATTGGAGTCTAATTTGAGTCTAAG
TGATAATATTATAGGATattatttttatcacttttGATAATTCCCTTCAC
ACATAAAGCCCACATGTTGTTAGGGTATCCGCTTTTGAACAAGCAGTGAT
AAGCGAGCATTCTGTATTAACAGGAaattttcctttcaataaactttttc
tCTCTGTATTTTAGGACCCCACTCATCTTAGCTGCTCAATCCAAGCGTCC
AGACCTCTTATTGGCCCTCTTAGAAAATGGTGCAGACCCAAAACATTACG
ACTCGTTTATGAAAAACGCAATTTGCTACACCGAGAAAGACTCCACTTGC
TACAAAATATTGCAAGGTTTCAAAGTTAataaaaagacgggaaaacgaaT
ATTTAAATATCGACCCGATGGGCAACTTGCAACTGTTCAAGCTATAAACG
TCAAGGCTAAGGACAATAATCAACGTGGTTCTACACCACCTAAACAAAAG
GGACAAAAAGACGCTCCTTATAATATCAACCCTAAGATGGATGACCCAGA
GTATCGAGCACATATCACCAGTCTGTTCACGGCATCCAAATTCAAGGAGC
CCAAACGGGAAGATCTTTATTACGATCCACTAAGCATTTAattctatttt
ttcttctttctaaatactattcaatttattttat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056155TCONS_00056155Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056155-proteinTCONS_00056155-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:149511..152844 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43	0.47	0.27	0.13	0.02	0.04	0	0	0	0	0.03	0	0.01	0.02	0.01	0.01	0	0	0.11	0.06	0	0	0.06	0.05	0.18	0.18	0	0	0	0