TCONS_00054155 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054155
Unique NameTCONS_00054155
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2355

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054155 ID=TCONS_00054155|Name=TCONS_00054155|organism=Clytia hemisphaerica|type=transcript|length=2355bp
acagATCAAATAAGTAAAAACATTATGGATGAAAAAAACACTATATATTA
TGATTCAGATGATGGTATCCAATTATTTGACAGTGATCATGgtgaaaatt
ttattgatgaaaaagaagaagattggGGCTTAGAATTTGATAATGAggaa
gaaaataaaattgatgtaaAGGAAAAAAAGGTGAAACAGGATGATGAAGT
CAATCAAGAGACAGGGGCATCTTCATCCAAGGAGACAAATACAGATGTCA
TCATACAACGAATGTCATTAAATGATGGAAAAGCTGGAATGCAAGGTctt
gataaagaaaaaatcaacaaaatcattCACGAAGCAAGTAAAGGATCAAA
ATTTTATGAGAATGAGAAACGTAAGGATGAACGTGTACAAGAGCGTGTTT
GTGAAATGAAACGTGATCTTTCTAAGTTTACGGAAACCGATAAAAAGAAA
GCCATTGTCGAAAGTGATAAATTATTAAAGGAACTAGATGATGAGTTTGA
TTTTACTCGCACGATCTGCCATGTTGATATGGATGCTTTCTACGCTGCAG
TTGAGATGAGAGATGACCCGAAACTGAAGGATGTCCCAATGGCGGTAGGT
GGGAATGATATGTTGTCTACTTCCAACTACCTTGCAAGGAAGTTCGGTGT
CCGTGCAGCCATGCCTGGTTTCATTGCCAAAAAGCTGTGTCCAAATCTTG
TCATTGTATCATCTCATTTTGATAAATATCGTGCAGTGAGTGCTGAGATT
CGTGAGATTTTCAAAGAATATGATCCAAATTTTTCACCCATGAGTCTTGA
TGAAGCTTATCTAGACTTGACTGAGTATCTGGTATCTAATTGTGAGGAAT
TGACTCTTAAAGTGGATGAAAATGATACCAGATGCCTTGCCGAGATTGTA
GTAGAAGAAATACGTACCAGAATTCACGATAAAACACAACTGACTGCTAG
TGCTGGTATAGCACCTAATTTGATGTTGTCAAAAATCTNGCAATTGACTG
CTAGTGCTGGTATAGCACCTAATTTGATGTTGTCAAAAATCTGTTCTGAT
TTCAATAAGCCAAATGGACAATATTATTTGCAGCCGAACAAAGAGATGGT
TGTGAATTTCATACAGGATTTACCTATACGTAAAGTATTTGGTATTGGTC
GAGTTACTGAACAGATGTTACAAGCTCTTGGAGTTACTCTTGTAAAGGAC
TTGTTGGCACAAAGAGATATTTTGTATTTGTTATTCTCTACAACGACTTT
TGCTTACTTCATGAGAGTTGCGTTAGGAATCTCAGGCAATCGGATTATGC
ATGACGATCGTAAAAGTATGAGTGTGGAGCGCACCTTTCACAATCAGCAG
AATAAAGACCAACTACTGAAAATTTGTAATTCACTTTGCCAAGAACTGGC
TAACGACTTAAAGAAGGAATCATTACAGATACGTAATATCACTTTAAAGT
ATAAACTATCTTCCTTTGTAACAAAGACTCGATCAAAAAGTATTCCTTAT
TCTATTTGCAAAGCAGAGGAACTTTTTCGATTCTCTAAAGAGATTTTGCT
GCATGAAATTCAAGAGTTTCAAAAAGAAGGGAAGAAATTCGAACTCAGGT
TAATGGGTGTCCGCGGTGCGcatttttatgataaaaaacAATCTTCAAGT
TTGAAGCAAAATGTCGTGGAAGACTTTTTTACTGCTAAATATTCAGAAAT
TTCTCCTGTAAAGCTGGGTGGTGCTTGTGCAGGACCATCTACTAAAGCAG
ATGATAAACTTGTACCCTGTCCTGTATGTGGAGCCCTGCAATCTAATGCT
AATTTAGATGCCTTAAATTCACACATTGATGCTTGCTTAACCAAACAAAC
TATCAAAGAAATAGTAAAAGAGCAAGATTTAATCGAGGCAAAAACTCAGA
AATCGTCACCAGCGAAAAGTACTGTTTCATCAGGAAAAAGGAAATCGAAT
GAacaattgaagaaaaaagaGTCGAAAAAGAGCAAGAACACGCTGCATTC
TTTTTGGAACAAATGAACATTGTTGTAATATTTGAATACACTTTTCGacc
ggtcaggcgcgtgccacttaattatttaattatccccctagaGTAccaaa
tccttttttgacacttttttctATGGCCTATTAgttgcgaaaaaaggact
gggacggtttaagtgggataaagcggactaaaaaatgcccgcgcggcaat
tggcggctgcGGTGGAAAAGGTGTATTTATCGTAGTCAGTTTAtctaatt
gaaaataattatttagatttttgtaaTCCGATGCTGCCCTCTTTATTAAG
TCTGCAAAAAAATTGCTATTGTTTTTGCCAGAAACTTACCAAAAAACGAT
TATGT
Run BLAST on NCBI

protein sequence of TCONS_00054155-protein

>TCONS_00054155-protein ID=TCONS_00054155-protein|Name=TCONS_00054155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=671bp
TDQISKNIMDEKNTIYYDSDDGIQLFDSDHGENFIDEKEEDWGLEFDNEE
ENKIDVKEKKVKQDDEVNQETGASSSKETNTDVIIQRMSLNDGKAGMQGL
DKEKINKIIHEASKGSKFYENEKRKDERVQERVCEMKRDLSKFTETDKKK
AIVESDKLLKELDDEFDFTRTICHVDMDAFYAAVEMRDDPKLKDVPMAVG
GNDMLSTSNYLARKFGVRAAMPGFIAKKLCPNLVIVSSHFDKYRAVSAEI
REIFKEYDPNFSPMSLDEAYLDLTEYLVSNCEELTLKVDENDTRCLAEIV
VEEIRTRIHDKTQLTASAGIAPNLMLSKIXQLTASAGIAPNLMLSKICSD
FNKPNGQYYLQPNKEMVVNFIQDLPIRKVFGIGRVTEQMLQALGVTLVKD
LLAQRDILYLLFSTTTFAYFMRVALGISGNRIMHDDRKSMSVERTFHNQQ
NKDQLLKICNSLCQELANDLKKESLQIRNITLKYKLSSFVTKTRSKSIPY
SICKAEELFRFSKEILLHEIQEFQKEGKKFELRLMGVRGAHFYDKKQSSS
LKQNVVEDFFTAKYSEISPVKLGGACAGPSTKADDKLVPCPVCGALQSNA
NLDALNSHIDACLTKQTIKEIVKEQDLIEAKTQKSSPAKSTVSSGKRKSN
EQLKKKESKKSKNTLHSFWNK
Run BLAST on NCBI

transcript from alignment at scaffold_242:26391..28890+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054155 ID=TCONS_00054155|Name=TCONS_00054155|organism=Clytia hemisphaerica|type=transcript|length=2500bp|location=Sequence derived from alignment at scaffold_242:26391..28890+ (Clytia hemisphaerica)
acagATCAAATAAGTAAAAACATTATGGATGAAAAAAACACTATATATTA TGATTCAGATGATGGTATCCAATTATTTGACAGTGATCATGgtgaaaatt ttattgatgaaaaagaagaagattggGGCTTAGAATTTGATAATGAggaa gaaaataaaattgatgtaaAGGAAAAAAAGGTGAAACAGGATGATGAAGT CAATCAAGAGACAGGTATATTGATATATGAATGCATTCTACAAAATCCAA AAAGGAAATGTTATTATCAATGTAAGTTTAGAATCTACCAAAAACTTTGA GACCGTTAATTTCAATATATTCTATGTTATTTTCATAATTGATACCGTTT ATTATATAGGGGCATCTTCATCCAAGGAGACAAATACAGATGTCATCATA CAACGAATGTCATTAAATGATGGAAAAGCTGGAATGCAAGGTcttgataa agaaaaaatcaacaaaatcattCACGAAGCAAGTAAAGGATCAAAATTTT ATGAGAATGAGAAACGTAAGGATGAACGTGTACAAGAGCGTGTTTGTGAA ATGAAACGTGATCTTTCTAAGTTTACGGAAACCGATAAAAAGAAAGCCAT TGTCGAAAGTGATAAATTATTAAAGGAACTAGATGATGAGTTTGATTTTA CTCGCACGATCTGCCATGTTGATATGGATGCTTTCTACGCTGCAGTTGAG ATGAGAGATGACCCGAAACTGAAGGATGTCCCAATGGCGGTAGGTGGGAA TGATATGTTGTCTACTTCCAACTACCTTGCAAGGAAGTTCGGTGTCCGTG CAGCCATGCCTGGTTTCATTGCCAAAAAGCTGTGTCCAAATCTTGTCATT GTATCATCTCATTTTGATAAATATCGTGCAGTGAGTGCTGAGATTCGTGA GATTTTCAAAGAATATGATCCAAATTTTTCACCCATGAGTCTTGATGAAG CTTATCTAGACTTGACTGAGTATCTGGTATCTAATTGTGAGGAATTGACT CTTAAAGTGGATGAAAATGATACCAGATGCCTTGCCGAGATTGTAGTAGA AGAAATACGTACCAGAATTCACGATAAAACACAACTGACTGCTAGTGCTG GTATAGCACCTAATTTGATGTTGTCAAAAATCTNGCAATTGACTGCTAGT GCTGGTATAGCACCTAATTTGATGTTGTCAAAAATCTGTTCTGATTTCAA TAAGCCAAATGGACAATATTATTTGCAGCCGAACAAAGAGATGGTTGTGA ATTTCATACAGGATTTACCTATACGTAAAGTATTTGGTATTGGTCGAGTT ACTGAACAGATGTTACAAGCTCTTGGAGTTACTCTTGTAAAGGACTTGTT GGCACAAAGAGATATTTTGTATTTGTTATTCTCTACAACGACTTTTGCTT ACTTCATGAGAGTTGCGTTAGGAATCTCAGGCAATCGGATTATGCATGAC GATCGTAAAAGTATGAGTGTGGAGCGCACCTTTCACAATCAGCAGAATAA AGACCAACTACTGAAAATTTGTAATTCACTTTGCCAAGAACTGGCTAACG ACTTAAAGAAGGAATCATTACAGATACGTAATATCACTTTAAAGTATAAA CTATCTTCCTTTGTAACAAAGACTCGATCAAAAAGTATTCCTTATTCTAT TTGCAAAGCAGAGGAACTTTTTCGATTCTCTAAAGAGATTTTGCTGCATG AAATTCAAGAGTTTCAAAAAGAAGGGAAGAAATTCGAACTCAGGTTAATG GGTGTCCGCGGTGCGcatttttatgataaaaaacAATCTTCAAGTTTGAA GCAAAATGTCGTGGAAGACTTTTTTACTGCTAAATATTCAGAAATTTCTC CTGTAAAGCTGGGTGGTGCTTGTGCAGGACCATCTACTAAAGCAGATGAT AAACTTGTACCCTGTCCTGTATGTGGAGCCCTGCAATCTAATGCTAATTT AGATGCCTTAAATTCACACATTGATGCTTGCTTAACCAAACAAACTATCA AAGAAATAGTAAAAGAGCAAGATTTAATCGAGGCAAAAACTCAGAAATCG TCACCAGCGAAAAGTACTGTTTCATCAGGAAAAAGGAAATCGAATGAaca attgaagaaaaaagaGTCGAAAAAGAGCAAGAACACGCTGCATTCTTTTT GGAACAAATGAACATTGTTGTAATATTTGAATACACTTTTCGaccggtca ggcgcgtgccacttaattatttaattatccccctagaGTAccaaatcctt ttttgacacttttttctATGGCCTATTAgttgcgaaaaaaggactgggac ggtttaagtgggataaagcggactaaaaaatgcccgcgcggcaattggcg gctgcGGTGGAAAAGGTGTATTTATCGTAGTCAGTTTAtctaattgaaaa taattatttagatttttgtaaTCCGATGCTGCCCTCTTTATTAAGTCTGC AAAAAAATTGCTATTGTTTTTGCCAGAAACTTACCAAAAAACGATTATGT

Coding sequence (CDS) from alignment at scaffold_242:26391..28890+

>TCONS_00054155 ID=TCONS_00054155|Name=TCONS_00054155|organism=Clytia hemisphaerica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_242:26391..28890+ (Clytia hemisphaerica)
acagATCAAATAAGTAAAAACATTATGGATGAAAAAAACACTATATATTA
TGATTCAGATGATGGTATCCAATTATTTGACAGTGATCATGgtgaaaatt
ttattgatgaaaaagaagaagattggGGCTTAGAATTTGATAATGAggaa
gaaaataaaattgatgtaaAGGAAAAAAAGGTGAAACAGGATGATGAAGT
CAATCAAGAGACAGGGGCATCTTCATCCAAGGAGACAAATACAGATGTCA
TCATACAACGAATGTCATTAAATGATGGAAAAGCTGGAATGCAAGGTctt
gataaagaaaaaatcaacaaaatcattCACGAAGCAAGTAAAGGATCAAA
ATTTTATGAGAATGAGAAACGTAAGGATGAACGTGTACAAGAGCGTGTTT
GTGAAATGAAACGTGATCTTTCTAAGTTTACGGAAACCGATAAAAAGAAA
GCCATTGTCGAAAGTGATAAATTATTAAAGGAACTAGATGATGAGTTTGA
TTTTACTCGCACGATCTGCCATGTTGATATGGATGCTTTCTACGCTGCAG
TTGAGATGAGAGATGACCCGAAACTGAAGGATGTCCCAATGGCGGTAGGT
GGGAATGATATGTTGTCTACTTCCAACTACCTTGCAAGGAAGTTCGGTGT
CCGTGCAGCCATGCCTGGTTTCATTGCCAAAAAGCTGTGTCCAAATCTTG
TCATTGTATCATCTCATTTTGATAAATATCGTGCAGTGAGTGCTGAGATT
CGTGAGATTTTCAAAGAATATGATCCAAATTTTTCACCCATGAGTCTTGA
TGAAGCTTATCTAGACTTGACTGAGTATCTGGTATCTAATTGTGAGGAAT
TGACTCTTAAAGTGGATGAAAATGATACCAGATGCCTTGCCGAGATTGTA
GTAGAAGAAATACGTACCAGAATTCACGATAAAACACAACTGACTGCTAG
TGCTGGTATAGCACCTAATTTGATGTTGTCAAAAATCTNGCAATTGACTG
CTAGTGCTGGTATAGCACCTAATTTGATGTTGTCAAAAATCTGTTCTGAT
TTCAATAAGCCAAATGGACAATATTATTTGCAGCCGAACAAAGAGATGGT
TGTGAATTTCATACAGGATTTACCTATACGTAAAGTATTTGGTATTGGTC
GAGTTACTGAACAGATGTTACAAGCTCTTGGAGTTACTCTTGTAAAGGAC
TTGTTGGCACAAAGAGATATTTTGTATTTGTTATTCTCTACAACGACTTT
TGCTTACTTCATGAGAGTTGCGTTAGGAATCTCAGGCAATCGGATTATGC
ATGACGATCGTAAAAGTATGAGTGTGGAGCGCACCTTTCACAATCAGCAG
AATAAAGACCAACTACTGAAAATTTGTAATTCACTTTGCCAAGAACTGGC
TAACGACTTAAAGAAGGAATCATTACAGATACGTAATATCACTTTAAAGT
ATAAACTATCTTCCTTTGTAACAAAGACTCGATCAAAAAGTATTCCTTAT
TCTATTTGCAAAGCAGAGGAACTTTTTCGATTCTCTAAAGAGATTTTGCT
GCATGAAATTCAAGAGTTTCAAAAAGAAGGGAAGAAATTCGAACTCAGGT
TAATGGGTGTCCGCGGTGCGcatttttatgataaaaaacAATCTTCAAGT
TTGAAGCAAAATGTCGTGGAAGACTTTTTTACTGCTAAATATTCAGAAAT
TTCTCCTGTAAAGCTGGGTGGTGCTTGTGCAGGACCATCTACTAAAGCAG
ATGATAAACTTGTACCCTGTCCTGTATGTGGAGCCCTGCAATCTAATGCT
AATTTAGATGCCTTAAATTCACACATTGATGCTTGCTTAACCAAACAAAC
TATCAAAGAAATAGTAAAAGAGCAAGATTTAATCGAGGCAAAAACTCAGA
AATCGTCACCAGCGAAAAGTACTGTTTCATCAGGAAAAAGGAAATCGAAT
GAacaattgaagaaaaaagaGTCGAAAAAGAGCAAGAACACGCTGCATTC
TTTTTGGAACAAATGAacagATCAAATAAGTAAAAACATTATGGATGAAA
AAAACACTATATATTATGATTCAGATGATGGTATCCAATTATTTGACAGT
GATCATGgtgaaaattttattgatgaaaaagaagaagattggGGCTTAGA
ATTTGATAATGAggaagaaaataaaattgatgtaaAGGAAAAAAAGGTGA
AACAGGATGATGAAGTCAATCAAGAGACAGGGGCATCTTCATCCAAGGAG
ACAAATACAGATGTCATCATACAACGAATGTCATTAAATGATGGAAAAGC
TGGAATGCAAGGTcttgataaagaaaaaatcaacaaaatcattCACGAAG
CAAGTAAAGGATCAAAATTTTATGAGAATGAGAAACGTAAGGATGAACGT
GTACAAGAGCGTGTTTGTGAAATGAAACGTGATCTTTCTAAGTTTACGGA
AACCGATAAAAAGAAAGCCATTGTCGAAAGTGATAAATTATTAAAGGAAC
TAGATGATGAGTTTGATTTTACTCGCACGATCTGCCATGTTGATATGGAT
GCTTTCTACGCTGCAGTTGAGATGAGAGATGACCCGAAACTGAAGGATGT
CCCAATGGCGGTAGGTGGGAATGATATGTTGTCTACTTCCAACTACCTTG
CAAGGAAGTTCGGTGTCCGTGCAGCCATGCCTGGTTTCATTGCCAAAAAG
CTGTGTCCAAATCTTGTCATTGTATCATCTCATTTTGATAAATATCGTGC
AGTGAGTGCTGAGATTCGTGAGATTTTCAAAGAATATGATCCAAATTTTT
CACCCATGAGTCTTGATGAAGCTTATCTAGACTTGACTGAGTATCTGGTA
TCTAATTGTGAGGAATTGACTCTTAAAGTGGATGAAAATGATACCAGATG
CCTTGCCGAGATTGTAGTAGAAGAAATACGTACCAGAATTCACGATAAAA
CACAACTGACTGCTAGTGCTGGTATAGCACCTAATTTGATGTTGTCAAAA
ATCTNGCAATTGACTGCTAGTGCTGGTATAGCACCTAATTTGATGTTGTC
AAAAATCTGTTCTGATTTCAATAAGCCAAATGGACAATATTATTTGCAGC
CGAACAAAGAGATGGTTGTGAATTTCATACAGGATTTACCTATACGTAAA
GTATTTGGTATTGGTCGAGTTACTGAACAGATGTTACAAGCTCTTGGAGT
TACTCTTGTAAAGGACTTGTTGGCACAAAGAGATATTTTGTATTTGTTAT
TCTCTACAACGACTTTTGCTTACTTCATGAGAGTTGCGTTAGGAATCTCA
GGCAATCGGATTATGCATGACGATCGTAAAAGTATGAGTGTGGAGCGCAC
CTTTCACAATCAGCAGAATAAAGACCAACTACTGAAAATTTGTAATTCAC
TTTGCCAAGAACTGGCTAACGACTTAAAGAAGGAATCATTACAGATACGT
AATATCACTTTAAAGTATAAACTATCTTCCTTTGTAACAAAGACTCGATC
AAAAAGTATTCCTTATTCTATTTGCAAAGCAGAGGAACTTTTTCGATTCT
CTAAAGAGATTTTGCTGCATGAAATTCAAGAGTTTCAAAAAGAAGGGAAG
AAATTCGAACTCAGGTTAATGGGTGTCCGCGGTGCGcatttttatgataa
aaaacAATCTTCAAGTTTGAAGCAAAATGTCGTGGAAGACTTTTTTACTG
CTAAATATTCAGAAATTTCTCCTGTAAAGCTGGGTGGTGCTTGTGCAGGA
CCATCTACTAAAGCAGATGATAAACTTGTACCCTGTCCTGTATGTGGAGC
CCTGCAATCTAATGCTAATTTAGATGCCTTAAATTCACACATTGATGCTT
GCTTAACCAAACAAACTATCAAAGAAATAGTAAAAGAGCAAGATTTAATC
GAGGCAAAAACTCAGAAATCGTCACCAGCGAAAAGTACTGTTTCATCAGG
AAAAAGGAAATCGAATGAacaattgaagaaaaaagaGTCGAAAAAGAGCA
AGAACACGCTGCATTCTTTTTGGAACAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034172XLOC_034172Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054155-proteinTCONS_00054155-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054155-exon-scaffold_242-1491911889:26391..26604TCONS_00054155-exon-scaffold_242-1491911889:26391..26604Clytia hemisphaericaexon
TCONS_00054155-exon-scaffold_242-1510915933:26391..26604TCONS_00054155-exon-scaffold_242-1510915933:26391..26604Clytia hemisphaericaexon
TCONS_00054155-exon-scaffold_242-1575043694:26391..26604TCONS_00054155-exon-scaffold_242-1575043694:26391..26604Clytia hemisphaericaexon
TCONS_00054155-exon-scaffold_242-1491911889:26750..28890TCONS_00054155-exon-scaffold_242-1491911889:26750..28890Clytia hemisphaericaexon
TCONS_00054155-exon-scaffold_242-1510915933:26750..28890TCONS_00054155-exon-scaffold_242-1510915933:26750..28890Clytia hemisphaericaexon
TCONS_00054155-exon-scaffold_242-1575043694:26750..28890TCONS_00054155-exon-scaffold_242-1575043694:26750..28890Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:26391..28890 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.31038 4.63441 1.50167 1.59158 4.91851 4.00445 6.53421 4.78897 3.25973 3.34553 4.1369 3.31233 1.4701 1.98473 2.2593 2.35723 2.24016 3.40162 0.822416 2.33591 2.45777 2.03277 8.11027 6.33653 2.84792 3.91845 1.21239 0.808683 6.25624 7.74893
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006642Znf_Rad18_put
IPR017961DNA_pol_Y-fam_little_finger
IPR017061DNA_pol_eta/kappa/iota/IV
IPR001126UmuC
IPR024728PolY_HhH_motif
IPR022880DNApol_IV
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003684damaged DNA binding
GO:0003887DNA-directed DNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Blast
BLAST of TCONS_00054155 vs. Swiss-Prot (Human)
Match: POLK (DNA polymerase kappa OS=Homo sapiens GN=POLK PE=1 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 8.978e-135
Identity = 237/521 (45.49%), Postives = 333/521 (63.92%), Query Frame = 1
Query:  244 DVIIQRMSLNDGKAGMQGLDKEKINKIIHEASKGSKFYENEKRKDERVQERVCEMKRDLSKFTETDKKKAIVESXXXXXXXXXXXXXTRTICHVDMDAFYAAVEMRDDPKLKDVPMAVGGNDMLSTSNYLARKFGVRAAMPGFIAKKLCPNLVIVSSHFDKYRAVSAEIREIFKEYDPNFSPMSLDEAYLDLTEYL--VSNCEE----LTLKVD---ENDT------------RCLAEIVVEEIRTRIH---DKTQLTASAGIAPNLMLSKI--------------------XQLTASAGIAPNLMLSKICSDFNKPNGQYYLQPNKEMVVNFIQDLPIRKVFGIGRVTEQMLQALGVTLVKDLLAQRDILYLLFSTTTFAYFMRVALGISGNRIMHD-DRKSMSVERTFHNQQNKDQLLKICNSLCQELANDLKKESLQIRNITLKYKLSSFVTKTRSKSIPYSICKAEELFRFSKEILLHEIQ-EFQKEGKKFELRLMGVRGAHFYDKKQSSSLKQNVV 1668
            D ++ RM LND KAGM+GLDKEKINKII EA+KGS+FY NE +K+++V +R+  M +  ++ T    +KA ++ D+   EL+   + + TI H+DMDAFYAAVEMRD+P+LKD P+AVG   MLSTSNY AR+FGVRAAMPGFIAK+LCP L+IV  +FDKYRAVS E++EI  +YDPNF  MSLDEAYL++T++L    N  E      +K+    END             R ++ ++ EE  + +    D  Q+       P ++ + +                      LTASAGIAPN ML+K+CSD NKPNGQY + PN++ V++FI+DLPIRKV GIG+VTE+ML+ALG+    +L  QR +L LLFS T++ YF+ ++LG+    +  D +RKSMSVERTF      ++   +C  LC ELA DL+KE L+ R +T+K K  +F  KTR+ ++   +  AEE+F  +KE+L  EI  +F        LRLMGVR + F +++     +++++
Sbjct:   13 DDLLLRMGLNDNKAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADF---PHPLRLRLMGVRISSFPNEEDRKHQQRSII 530          
The following BLAST results are available for this feature:
BLAST of TCONS_00054155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
POLK8.978e-13545.49DNA polymerase kappa OS=Homo sapiens GN=POLK PE=1 ... [more]
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