TCONS_00051669 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051669
Unique NameTCONS_00051669
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2670

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051669 ID=TCONS_00051669|Name=TCONS_00051669|organism=Clytia hemisphaerica|type=transcript|length=2670bp
TGAGAGTTTCTtattgacggggactttaaatttcatcgaataagcgAGCC
TATtgaatagtagaatgtcgaattagagagcgccagctgtactgttcttt
tttttataaaaaggtaATTTCATACAGATATTCAACAAACAACGCATTCA
TAGGAAGCAATTGACCTCATACACGCAAGATGGCGTTtaccaaattcaaa
aagttcatcaGAAGTTTACGCTACTATCCAGAACTGCTTTTCGTTTTTCA
TCTGTATGGTGTCCTATTCTCTGGACCAACGTTGGAGCAATATTTATATA
AAGTGTTCAGTGACGAAGTTGGATATAATTATACGTATAATTCAAATACT
GCTAATAGTGATTGCAATAAAGGTGATTTGAACTCGACCAGCCATACACT
TTTGAAGGAGGTTCAAGACCGAATATCCAAGTTCCAACTTTATTTAATGT
TAGCGCAAAACATTCCACCTATTTTGTTAGTTCTTTTCTTCGGCCCATTA
GCCGATCGGTATGGTCGTAAAGTTGTCATGATGATCGCCTTTATCGGTTA
CGCATTTTGGTCGACGATCCTCACTGCCGTTGTTTATTTCAATTTGAGCA
GATATTTAATTCTTGTTGCTAATTTCATTTGGGGATGTTGTGGATATTAT
TTATCAGCTGTTGTTGCGTTATTGGCTTATGTTTCTGACCGAACGCAACC
GGATAATAGAGCTTTTAGAATAGcTATTGTGGATCTTGTTTTATTCGCTG
CCATAACAGCGAGCAACTTCTCAAACGGCAAATATCTTCAAGAATTTGGA
TTCCTTGCTTGTTTTCTTCTGATGTTTACCATCTCAATCGTATCCGTGAT
CTGGTGTTTTCTATTCATCTCCGAATCACTACCGCCTGAGAAAAGAACTG
AAACAAAAGATCCATTATTTACCATCCCTCGTCGGGTGCTAGGTAGCGTT
ATCAGAAAGAGACCTAACCGTAAAAAGTTACTTCTCCTCATGGTGGTGGA
TTCGACTGTAGGTTTTACAGCACCTGTCAGTGTTCAGAGTCTGTTAATTC
TTATTTTACTGAACATTCCATTCTGTTGGCCCTCTTCATGGATAGGATAT
TACAGGGGCGCCCTTTTCGCTATAATGGGCGTGGGCGGTGTAATAGCAGT
GAAACTGTTACCGTATATCATGGCAAAACCGTTGGTCATTATTGTGGCTT
GTTTATCGTCTGCCGGTTATTTAGTATCATTTTCACTCTCCAGAAGTGTA
TGGGCTTCTTATccattttagcTGGTTTATTTGCATATTCAGCACAACCA
ATAACAAGAGGAATAATCTCACAAATTGTTGATGCCAACGAACAAGGTGC
AGTCTTTTCAGTACTTGGTTTCTTCCAAACCATCGTCAGTTTGGTAGCCT
CGTTATCTTACAATGCAATCTACATTTACACGAATCAACATAACGAACCT
GCTGCTGTGTTCATTATTGCTAGTTTCACTACAATCATTCCTATCATTTT
CTCAACatatttttactacgtcgaaaaaaaaaatcgtaaCACTCAAAACG
ACGACGAAAACACAGAACAACCAACACCACCCacaaacaaaaattgcaat
gacACAAAAGAAGATGACAAAGGCGGAGAAGATTACGAAAGTATAGACAA
TGCtttcaatgaaaatgatgaTAGAAATGGActagtgatttgattggtca
attACGAATAAAAATGACAATGCAGCAGCAATCTCACTTGGATTTCATTG
CGAGATGCATCAAAATATAATCCGATTTTAGAGACAAACGGGATGTTTCT
TCAATGAAAAGATTATTCTATAAGAGGTTTCAAAGTTATGAAATCGACTT
TCAATCTCTAGTGAATAGTACCGAGTTTAAAATGGCACATTTATGGAAAA
CTCCACATCTATGATTTTAAGTCTCATCTTTGCTCTTTGCCCGTCATTGC
CAGTGGTAGGACTTGTTTAGTAGTGATAAATTTTCGTAATTTACaccaga
aaaaaatgtttaagaTTTGCCACTATTGGCGAAAACCGGTttgtttccgt
agaaaacattacgtaatgaatattGTGAATAACAAGGACACTACCCCGAC
AATACACTCTAACCTAATTGTCTGTAATAACCACGTGGTTACGAACTTGC
AACGGAGATTTTTGGCATCATTGAAACTTTCGCTGAATGCTGATGTCAAG
CTAACATGATTGATAGGATAATATAAGACACACATTATTAATTTCTTAGG
TTCACTGTGAAAAAGCTTCAATCTaccaaaaactgaaaaattcacggtgt
tttttcttttcttctgtaATACTGAGCTGATTTTGGTTTATTTGTTGGAC
ACAAAAAAAGTGCTTTAGGCTATCTTCGAAATGTTTCTTTCCCTTTGACC
CGGTAGGATTTATTCAGACAGTGGGAGGTAAAAATAGCGGAAACTCTATC
AGGTTTCCATGTGTTTATAACCGGAGATTTGAGTTCCGTTGTTTCCAAGT
CAGCAAACTTACAAtattggtcaaaatatattgagaattttggttaattc
ctcgtttttagcattTTATAGTTCGCCGGGTGAGAAAGTGGCTTTTGGGC
TATTTGTTAAACTTGATCGAATATTTCAGTTTGGGTGGGGTTTATACCTT
TCCCACCTAGAGTTAGAGCG
Run BLAST on NCBI

transcript from alignment at scaffold_202:1224613..1232124-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051669 ID=TCONS_00051669|Name=TCONS_00051669|organism=Clytia hemisphaerica|type=transcript|length=7512bp|location=Sequence derived from alignment at scaffold_202:1224613..1232124- (Clytia hemisphaerica)
TGAGAGTTTCTTATTGACGGGGACTTTAAATTTCATCGAATAAGCGAGCC
TATTGAATAGTAGAATGTCGAATTAGAGAGCGCCAGCTGTACTGTTCTTT
TTTTTATAAAAAGGTAATTTCATACAGATATTCAACAAACAACGCATTCA
TAGGAAGCAATTGACCTCATACACGCAAGATGGCGTTTACCAAATTCAAA
AAGTTCATCAGAAGTTTACGCTACTATCCAGAACTGCTTTTCGTTTTTCA
TCTGTATGGTGTCCTATTCTCTGGACCAACGTTGGAGCAATATTTATATA
AAGTGTTCAGTGACGAAGTTGGATATAATTATACGTATAATTCAAATACT
GCTAATAGTGATTGCAATAAAGGTGATTTGAACTCGACCAGCCATACACT
TTTGAAGGAGGTAAGAGATTCTATACTTACTAACTGGCACAAGACGTCAA
CGTTTCAAAATCTGGTAATTAGCATATGGCTTAGGCCATTCTAATTGATT
TTTAAACCATGTCAGATAAATAAAATCGGAAATTTTTTCAAGGATTAATT
TATTTTGGAACTCTGTTAGGTCAGCAGACTTTGAAAAAGTTGCAAGGCTG
TGAACCCAAGAACCCAGCACCCTAAAGATACACTAAATATCAACTTGAAT
CTTTTTCTAGCTTGGTAAGAAATATATCCCATCTTGTTTAGTTGAACATT
AGAAACACAATTGGGCTTTTCCAGAAAAAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAATGGGGGGGGGG
GTGGAGGATATAACAATTTTCAGTGATTTACCCCGGACAAAGTGACTTTT
GGCCCCCGGACAAGCATCAGTTGACCCCCCGAACAACCCAAATTACCCCC
GGAAAATATATCCTCCACCCCCCATATACGGACATTTTCTGGAAGAGCCC
ATTATGAATACGACTTTTCAACGTTTGTCTTTGACAAGTTCCATTTTCTT
TATTTATAGGTTCAAGACCGAATATCCAAGTTCCAACTTTATTTAATGTT
AGCGCAAAACATTCCACCTATTTTGTTAGTTCTTTTCTTCGGCCCATTAG
CCGATCGGTATGGTCGTAAAGTTGTCATGATGATCGCCTTTATCGGTTAC
GCATTTTGGTCGACGATCCTCACTGCCGTTGTTTATTTCAATTTGAGCAG
ATATTTAATTCTTGTTGCTAATTTCATTTGGGGATGTTGTGGATATTATT
TATCAGCTGTTGTTGCGTTATTGGCTTATGTTTCTGACCGAACGCAACCG
GATAATAGAGCTTTTAGAATAGGTAAGTTTGTTTTGTCTTTTTTATTTCT
AGAACACCTCTGTGTCACAGACCCGCTGGGACCCTAGCCCCACTGGAAAA
TTTGGCAAAAATTTCGTTCCCTGTGGAAAAATAACCTGGAATTTCAGCCC
CACTGGGAATTTGAGTTTGATTTTAACCCCATTCGATATCCAATGTTTAA
AAATTGCACTCCAAAACCATCCCCACTGGATTTTTTAACCTTGGAACAAT
AAAATTTCTATCCCCATTGAGATTTCAATAGGAATTTTTTTCCCCACTGA
GGAAAAAAGTTCCACCGGGTCTGCGAGACAGAAGTGTTTCTAGTTCTGGA
GTTCTGGAGAACGTGTATTGGCAATTTTCATTCGTATAAGCTACTCTGTG
CTTCCAAAAGGTTTTTGCTCTTCAAACCTTCAGATTAAGAAGGTATAGGA
TGTCCATTTTTCATGTTTATTCGAGCGATATCGATATATTAGTAGTCAAT
TATCTGTTCAGTGAAGCTTCGATTGTCTAAAAGATTGAATTTGTTTTATA
TTTTCAGCTATTGTGGATCTTGTTTTATTCGCTGCCATAACAGCGAGCAA
CTTCTCAAACGGCAAATATCTTCAAGAATTTGGATTCCTTGCTTGTTTTC
TTCTGATGTTTACCATCTCAATCGTATCCGTGATCTGGTGTTTTCTATTC
ATCTCCNCAAAAATGTCAACAAAAATAATTGCACCAGATTATAAGATTTA
GGGTTTTCTTGCTTCTTTTTTCCCTTTTTGATAATCTGGTATTACAATTT
TGGGGTAAAACTAAAGGGTTTAGACCAAAAATATGAATTTATTTATGTTT
CGAGGTGTTAAAGTAGATTAACTCAAACTGAACGGGTTGCAACGGGTCCC
AATTATGATAACACAAGATATAAGAAAGCGAAAAATAACAAAACAAATAG
AGCCTAAACCTTGGTGTGATTGCCTTTAAAGATAGAGAAATAGACTTTGT
AGAAAATCTAAGACATCCCTGTGTCACAGACCCGCTTGGACCCCAGCCCC
ACTGGAAAATTTGGCAAAGAATTCCCCAATTTTTCGCTGGAAATTTGACT
TTGAATTAATCCCCATTCGAGACCCAATGTTTAAAAATTGCACTCCAAAA
CCATCCCCACTGGATTTTTTAACCTTGGAACAATAAAATTTCTATCCCCA
TTGAGATTTCAATAGGAATTTTTTTCCCCACTGAGGAAAAAAGTTCCACC
GGGTCTGCGAGACAGAAGTGTTTCTAGTTCTGGAGTTCTGGAGAACGTGT
ATTGGCAATTTTCATTCGTATAAGCTACTCTGTGCTTCCAAAAGGTTTTT
GCTCTTCAAACCTTCAGATTAAGAAGGTATAGGATGTCCATTTTTCATGT
TTATTCGAGCGATATCGATATATTAGTAGTCAATTATCTGTTCAGTGAAG
CTTCGATTGTCTAAAAGATTGAATTTGTTTTATATTTTCAGCTATTGTGG
ATCTTGTTTTATTCGCTGCCATAACAGCGAGCAACTTCTCAAACGGCAAA
TATCTTCAAGAATTTGGATTCCTTGCTTGTTTTCTTCTGATGTTTACCAT
CTCAATCGTATCCGTGATCTGGTGTTTTCTATTCATCTCCGAATCACTAC
CGCCTGAGAAAAGAACTGAAACAAAAGATCCATTATTTACCATCCCTCGT
CGGGTGCTAGGTAGCGTTATCAGAAAGAGACCTAACCGTAAAAAGTTACT
TCTCCTCATGGTGGTGGATTCGACTGTAGGTTTTACAGCACCTGTCAGTG
TTCAGAGTCTGTTAATTCTTATTTTACTGAACATTCCATTCTGTTGGCCC
TCTTCATGGATAGGATATTACAGGGGCGCCCTTTTCGCTATAATGGGCGT
GGGCGGTGTAATAGCAGTGAAACTGTTACCGTATATCATGGCAAAACCGT
TGGTCATTATTGTGGCTTGTTTATCGTCTGCCGGTTATTTAGTATCATTT
TCACTCTCCAGAAGTGTATGGGCTTCTTATGTATGTAAGTTGTTTTATAA
AAGATTTATTTTACTTTTAACTGTAATAAAAATACATACTTTGAAAGATA
CTGTCTTAGGCTCTCTAAATTACAATGTAGTTCTCTGCTGTACCTCATAC
TATAGCCTTGAAACAATGGATCTGTTGTTTGAGGACAAAATTATATTAAT
AACGTTACCAATTGGTAGACACTTAGCTTAAGAAACCACTAAGGAAGAAA
ACCTTAATTGTATTTTACAAACTGAGACACAAAGTATTTTTCTCTGTATG
TGAAATAATTAAACTTTTTGAAAAGTTGGTATTATTTACGCTTCTCACGC
GACCAAAATTTGTCTGCAATCAGATCTGATGTATACGGAAATTACAGAAT
TTCATTGCCGCAGTGAGGCAATGTGATACGCTATTTGATACTTTAGATGC
CCTCTGGTACAGAGTAAGCCAAAATTAAATTATTTTTTCGACGAATAAAA
GGAAACACTTAACCCCATATTTACGGCTCTTGTTGTATCTTAGAAACAGA
CTTTGCAAAAATACCTTTTTTATTTTCAGCCATTTTAGCTGGTTTATTTG
CATATTCAGCACAACCAATAACAAGAGGAATAATCTCACAAATTGTTGAT
GCCAACGAACAAGGTAAGGAGATACAATTGAAGAAAGGATTTAGAAAAAA
TTTGTTACAATTACCTAAAATAGAATTCAACTCCAGTGGAAGGCTTCAAC
AACCTTAGATGAGAAGTTTTTATTCGAAATCTATTGATAAATGAAAGGTT
TTTTGCATTCAGCAATAGTGACCCAAGTCAATATTTTCTACGCATACCCT
AGCTTGGACCGTGGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCAAATTGTTGATGCCAACGAACAAGGTAAGGAGATACAATTGAAG
AAAGGATTTAGAAAAAAATTGTCACAATTACCTAAAATAGAATTCAACTC
CAGTGGCAGGCTTCAACAACCTTAGATGAGAATTGCATTCAGCAATTGTG
ACCCAAGTCAATCTTTTTTACGCATACCCTAGCTTGGACCGTGGCCCTGG
GGGGGGGGCACTCATGGCGGTCTGACACTACAAGGGTCTTCTTTTAGTTG
GACTGCTTTGACAATAAAAATCTGATGTATCTTTGTATTTGACTCACTTT
GATTTCACAAACCAATTTTTGGCCGCACATGCCATCATTTAGAAATCGAG
TGCACCACCCCTCCCCCTGGGACATTGGTGTCTCAACATTGGTTCACGTT
ATATCTTGGTAATCCTTTGACTTTTATTATTATTATTATTCCTTTTCTCC
CAAACAGGTGCAGTCTTTTCAGTACTTGGTTTCTTCCAAACCATCGTCAG
TTTGGTAGCCTCGTTATCTTACAATGCAATCTACATTTACACGAATCAAC
ATAACGAACCTGCTGCTGTGTTCATTATTGCTAGTTTCACTACAATCATT
CCTATCATTTTCTCAACGTAAGTTTTCCACTTTGTAAGTAACTTTATTAG
CTGTATGCTTTGTGTAAGCCAAAATCAATAACAGTGCTCAATGTTAATGA
TAACAGAGCTTTATACCTCGGATATCATTAATAAAAACATTTTTGCATAA
TCGTTTTTTTCAAATTTTGCTGACGTCAGCAGAAATCAGCAAAATACGAA
AATTTGCAATAAAGTCCTGACATCAGCAAAATTTCAAAAAAATAATTTTT
CAAAATGAACCTTTTAATGATGTGCAACTTTGGTCCAAATTTCATGTTCA
TATCATTAGCCAAACTGGAGTTATTTAAAAAACAAGTTTTGCTGACGTCA
GCAATTTTTGATTTTTGCGATTTTTCGCAAAATTGGCAAAACCTAAATTT
AAGTAACACCGATTTTCATGTTCTACATCGTAATGCACTTCTTTAAAGGT
ATAATTTATTATGCTAGGAGGGGTGGAATTGCCTCCGAAAAATTAACGAA
AATTTGGACACGCATTAATTTACCCGAGACTAGTTTGAGTAAAGAAAACG
ATTTAGTTTAATTTCATACTCACGGTTTCATGCCATCCAGGATGGCAATA
TTCAGTGAAATAAACGTTTTATAAAAATTTACAATTTAATGTCTTCAAAA
AAATTTTCTGACGTCAATTCAAAATAAGAATTATTCGAAAGTCTCGAAGA
GAAATTTTAGTCTGTGGCGGCATTTGGCGATGATTTCAGTTCGCTTGTTT
AATAAGTTCCGACCCGGATAGATAACAATCTCGAATTTCTCTGTATACGC
TGTATTGAAAACACAAAATGAGTCTGCAAGCTTCAAACAGTGCTCAACTA
ACTAGGAGCGGATATTCACTTTTTTCACAACTGATGATTGTAGAAATATA
AAACTCAGAGTCTGTAGTGAAATACAGTGTGTTCGTGGAAATCTTCTATT
TATAATTTAATTTTTCAATAGTTTTTACTAGTATAGTATTTTGTCAATGC
TTGCAAGTATCAACAAATATTATAGAACTATCCCTACTTCTAGACCAACC
TTGTGAAGATCTATGATTTGAAAAAAAATTTTGTCTTTCTTTTTTCAGAT
ATTTTTACTACGTCGAAAAAAAAAATCGTAACACTCAAAACGACGACGAA
AACACAGAACAACCAACACCACCCACAAACAAAAATTGCAATGACACAAA
AGAAGATGACAAAGGCGGAGAAGATTACGAAAGTATAGACAATGCTTTCA
ATGAAAATGATGATAGAAATGGACTAGTGATTTGATTGGTCAATTACGAA
TAAAAATGACAATGCAGCAGCAATCTCACTTGGATTTCATTGCGAGATGC
ATCAAAATATAATCCGATTTTAGAGACAAACGGGATGTTTCTTCAATGAA
AAGATTATTCTATAAGAGGTTTCAAAGTTATGAAATCGACTTTCAATCTC
TAGTGAATAGTACCGAGTTTAAAATGGCACATTTATGGAAAACTCCACAT
CTATGATTTTAAGTCTCATCTTTGCTCTTTGCCCGTCATTGCCAGTGGTA
GGACTTGTTTAGTAGTGATAAATTTTCGTAATTTACACCAGAAAAAAATG
TTTAAGATTTGCCACTATTGGCGAAAACCGGTTTGTTTCCGTAGAAAACA
TTACGTAATGAATATTGTGAATAACAAGGACACTACCCCGACAATACACT
CTAACCTAATTGTCTGTAATAACCACGTGGTTACGAACTTGCAACGGAGA
TTTTTGGCATCATTGAAACTTTCGCTGAATGCTGATGTCAAGCTAACATG
ATTGATAGGATAATATAAGACACACATTATTAATTTCTTAGGTTCACTGT
GAAAAAGCTTCAATCTACCAAAAACTGAAAAATTCACGGTGTTTTTTCTT
TTCTTCTGTAATACTGAGCTGATTTTGGTTTATTTGTTGGACACAAAAAA
AGTGCTTTAGGCTATCTTCGAAATGTTTCTTTCCCTTTGACCCGGTAGGA
TTTATTCAGACAGTGGGAGGTAAAAATAGCGGAAACTCTATCAGGTTTCC
ATGTGTTTATAACCGGAGATTTGAGTTCCGTTGTTTCCAAGTCAGCAAAC
TTACAATATTGGTCAAAATATATTGAGAATTTTGGTTAATTCCTCGTTTT
TAGCATTTTATAGTTCGCCGGGTGAGAAAGTGGCTTTTGGGCTATTTGTT
AAACTTGATCGAATATTTCAGTTTGGGTGGGGTTTATACCTTTCCCACCT
AGAGTTAGAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032703XLOC_032703Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051669-exon-scaffold_202-1575043694:1231715..1232124TCONS_00051669-exon-scaffold_202-1575043694:1231715..1232124Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1575043694:1230753..1231065TCONS_00051669-exon-scaffold_202-1575043694:1230753..1231065Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1575043694:1228745..1229283TCONS_00051669-exon-scaffold_202-1575043694:1228745..1229283Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1575043694:1228112..1228195TCONS_00051669-exon-scaffold_202-1575043694:1228112..1228195Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1575043694:1226858..1227017TCONS_00051669-exon-scaffold_202-1575043694:1226858..1227017Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1575043694:1224613..1225776TCONS_00051669-exon-scaffold_202-1575043694:1224613..1225776Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1510915933:1231715..1232124TCONS_00051669-exon-scaffold_202-1510915933:1231715..1232124Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1510915933:1230753..1231065TCONS_00051669-exon-scaffold_202-1510915933:1230753..1231065Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1510915933:1228745..1229283TCONS_00051669-exon-scaffold_202-1510915933:1228745..1229283Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1510915933:1228112..1228195TCONS_00051669-exon-scaffold_202-1510915933:1228112..1228195Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1510915933:1226858..1227017TCONS_00051669-exon-scaffold_202-1510915933:1226858..1227017Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1510915933:1224613..1225776TCONS_00051669-exon-scaffold_202-1510915933:1224613..1225776Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1491911889:1231715..1232124TCONS_00051669-exon-scaffold_202-1491911889:1231715..1232124Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1491911889:1230753..1231065TCONS_00051669-exon-scaffold_202-1491911889:1230753..1231065Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1491911889:1228745..1229283TCONS_00051669-exon-scaffold_202-1491911889:1228745..1229283Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1491911889:1228112..1228195TCONS_00051669-exon-scaffold_202-1491911889:1228112..1228195Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1491911889:1226858..1227017TCONS_00051669-exon-scaffold_202-1491911889:1226858..1227017Clytia hemisphaericaexon
TCONS_00051669-exon-scaffold_202-1491911889:1224613..1225776TCONS_00051669-exon-scaffold_202-1491911889:1224613..1225776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1224613..1232124 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.095319	0	0.0213592	0.0381523	0.0634636	0.0508523	0	0.49397	0	0	0	0.28908	0.219031	0.371197	0.929703	0	0	0.478518	0	0.289165	0.260055	0	0.666741	0	0	8.29731e-10	0	0.435549	0	0
Blast
[Close]
BLAST of TCONS_00051669 vs. Swiss-Prot (Human)
Match: S46A3 (Solute carrier family 46 member 3 OS=Homo sapiens GN=SLC46A3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.321e-17
Identity = 57/220 (25.91%), Postives = 109/220 (49.55%), Query Frame = 3 
Query:  255 YGVLFSGPTLEQYLYKVFSDEVGXXXXXXXXXXXXDCNKGDLNSTSHTLLKEVQDRISKFQLYLMLAQNIPPILLVLFFGPLADRYGRKVVMMIAFIGYAFWSTILTAVVYFNLSRYLILVANFIWGCCGYYLSAVVALLAYVSDR-TQPDNRAFRIAIVDLVLFAAITASNFSNGKYLQEFGFLACFLLMFTISIVSVIWCFLFISESLPPEKRTETKD 911
            + +  +GP   QY+Y+   +E G     + +  + +C K   +S      +EVQ ++S+F L + ++  IP ++       ++D YGRK  M+++ +G    S  L  + YF     L++ + FI   CG Y +   A  AY+ D+  +   +  RIAI+D +L      +  S+G +++E GF   FL++     V++I+   F+ +   P K   +++
Sbjct:   15 FAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNIS-ECEKNK-SSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGD---PVKECSSQN 229
The following BLAST results are available for this feature:
BLAST of TCONS_00051669 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S46A37.321e-1725.91Solute carrier family 46 member 3 OS=Homo sapiens ... [more]
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