XLOC_032703 (gene) - C. hemisphaerica

Overview
NameXLOC_032703
Unique NameXLOC_032703
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:1224613..1232124-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032703 ID=XLOC_032703|Name=XLOC_032703|organism=Clytia hemisphaerica|type=gene|length=7512bp|location=Sequence derived from alignment at scaffold_202:1224613..1232124- (Clytia hemisphaerica)
TGAGAGTTTCTTATTGACGGGGACTTTAAATTTCATCGAATAAGCGAGCC
TATTGAATAGTAGAATGTCGAATTAGAGAGCGCCAGCTGTACTGTTCTTT
TTTTTATAAAAAGGTAATTTCATACAGATATTCAACAAACAACGCATTCA
TAGGAAGCAATTGACCTCATACACGCAAGATGGCGTTTACCAAATTCAAA
AAGTTCATCAGAAGTTTACGCTACTATCCAGAACTGCTTTTCGTTTTTCA
TCTGTATGGTGTCCTATTCTCTGGACCAACGTTGGAGCAATATTTATATA
AAGTGTTCAGTGACGAAGTTGGATATAATTATACGTATAATTCAAATACT
GCTAATAGTGATTGCAATAAAGGTGATTTGAACTCGACCAGCCATACACT
TTTGAAGGAGGTAAGAGATTCTATACTTACTAACTGGCACAAGACGTCAA
CGTTTCAAAATCTGGTAATTAGCATATGGCTTAGGCCATTCTAATTGATT
TTTAAACCATGTCAGATAAATAAAATCGGAAATTTTTTCAAGGATTAATT
TATTTTGGAACTCTGTTAGGTCAGCAGACTTTGAAAAAGTTGCAAGGCTG
TGAACCCAAGAACCCAGCACCCTAAAGATACACTAAATATCAACTTGAAT
CTTTTTCTAGCTTGGTAAGAAATATATCCCATCTTGTTTAGTTGAACATT
AGAAACACAATTGGGCTTTTCCAGAAAAAAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAATGGGGGGGGGG
GTGGAGGATATAACAATTTTCAGTGATTTACCCCGGACAAAGTGACTTTT
GGCCCCCGGACAAGCATCAGTTGACCCCCCGAACAACCCAAATTACCCCC
GGAAAATATATCCTCCACCCCCCATATACGGACATTTTCTGGAAGAGCCC
ATTATGAATACGACTTTTCAACGTTTGTCTTTGACAAGTTCCATTTTCTT
TATTTATAGGTTCAAGACCGAATATCCAAGTTCCAACTTTATTTAATGTT
AGCGCAAAACATTCCACCTATTTTGTTAGTTCTTTTCTTCGGCCCATTAG
CCGATCGGTATGGTCGTAAAGTTGTCATGATGATCGCCTTTATCGGTTAC
GCATTTTGGTCGACGATCCTCACTGCCGTTGTTTATTTCAATTTGAGCAG
ATATTTAATTCTTGTTGCTAATTTCATTTGGGGATGTTGTGGATATTATT
TATCAGCTGTTGTTGCGTTATTGGCTTATGTTTCTGACCGAACGCAACCG
GATAATAGAGCTTTTAGAATAGGTAAGTTTGTTTTGTCTTTTTTATTTCT
AGAACACCTCTGTGTCACAGACCCGCTGGGACCCTAGCCCCACTGGAAAA
TTTGGCAAAAATTTCGTTCCCTGTGGAAAAATAACCTGGAATTTCAGCCC
CACTGGGAATTTGAGTTTGATTTTAACCCCATTCGATATCCAATGTTTAA
AAATTGCACTCCAAAACCATCCCCACTGGATTTTTTAACCTTGGAACAAT
AAAATTTCTATCCCCATTGAGATTTCAATAGGAATTTTTTTCCCCACTGA
GGAAAAAAGTTCCACCGGGTCTGCGAGACAGAAGTGTTTCTAGTTCTGGA
GTTCTGGAGAACGTGTATTGGCAATTTTCATTCGTATAAGCTACTCTGTG
CTTCCAAAAGGTTTTTGCTCTTCAAACCTTCAGATTAAGAAGGTATAGGA
TGTCCATTTTTCATGTTTATTCGAGCGATATCGATATATTAGTAGTCAAT
TATCTGTTCAGTGAAGCTTCGATTGTCTAAAAGATTGAATTTGTTTTATA
TTTTCAGCTATTGTGGATCTTGTTTTATTCGCTGCCATAACAGCGAGCAA
CTTCTCAAACGGCAAATATCTTCAAGAATTTGGATTCCTTGCTTGTTTTC
TTCTGATGTTTACCATCTCAATCGTATCCGTGATCTGGTGTTTTCTATTC
ATCTCCNCAAAAATGTCAACAAAAATAATTGCACCAGATTATAAGATTTA
GGGTTTTCTTGCTTCTTTTTTCCCTTTTTGATAATCTGGTATTACAATTT
TGGGGTAAAACTAAAGGGTTTAGACCAAAAATATGAATTTATTTATGTTT
CGAGGTGTTAAAGTAGATTAACTCAAACTGAACGGGTTGCAACGGGTCCC
AATTATGATAACACAAGATATAAGAAAGCGAAAAATAACAAAACAAATAG
AGCCTAAACCTTGGTGTGATTGCCTTTAAAGATAGAGAAATAGACTTTGT
AGAAAATCTAAGACATCCCTGTGTCACAGACCCGCTTGGACCCCAGCCCC
ACTGGAAAATTTGGCAAAGAATTCCCCAATTTTTCGCTGGAAATTTGACT
TTGAATTAATCCCCATTCGAGACCCAATGTTTAAAAATTGCACTCCAAAA
CCATCCCCACTGGATTTTTTAACCTTGGAACAATAAAATTTCTATCCCCA
TTGAGATTTCAATAGGAATTTTTTTCCCCACTGAGGAAAAAAGTTCCACC
GGGTCTGCGAGACAGAAGTGTTTCTAGTTCTGGAGTTCTGGAGAACGTGT
ATTGGCAATTTTCATTCGTATAAGCTACTCTGTGCTTCCAAAAGGTTTTT
GCTCTTCAAACCTTCAGATTAAGAAGGTATAGGATGTCCATTTTTCATGT
TTATTCGAGCGATATCGATATATTAGTAGTCAATTATCTGTTCAGTGAAG
CTTCGATTGTCTAAAAGATTGAATTTGTTTTATATTTTCAGCTATTGTGG
ATCTTGTTTTATTCGCTGCCATAACAGCGAGCAACTTCTCAAACGGCAAA
TATCTTCAAGAATTTGGATTCCTTGCTTGTTTTCTTCTGATGTTTACCAT
CTCAATCGTATCCGTGATCTGGTGTTTTCTATTCATCTCCGAATCACTAC
CGCCTGAGAAAAGAACTGAAACAAAAGATCCATTATTTACCATCCCTCGT
CGGGTGCTAGGTAGCGTTATCAGAAAGAGACCTAACCGTAAAAAGTTACT
TCTCCTCATGGTGGTGGATTCGACTGTAGGTTTTACAGCACCTGTCAGTG
TTCAGAGTCTGTTAATTCTTATTTTACTGAACATTCCATTCTGTTGGCCC
TCTTCATGGATAGGATATTACAGGGGCGCCCTTTTCGCTATAATGGGCGT
GGGCGGTGTAATAGCAGTGAAACTGTTACCGTATATCATGGCAAAACCGT
TGGTCATTATTGTGGCTTGTTTATCGTCTGCCGGTTATTTAGTATCATTT
TCACTCTCCAGAAGTGTATGGGCTTCTTATGTATGTAAGTTGTTTTATAA
AAGATTTATTTTACTTTTAACTGTAATAAAAATACATACTTTGAAAGATA
CTGTCTTAGGCTCTCTAAATTACAATGTAGTTCTCTGCTGTACCTCATAC
TATAGCCTTGAAACAATGGATCTGTTGTTTGAGGACAAAATTATATTAAT
AACGTTACCAATTGGTAGACACTTAGCTTAAGAAACCACTAAGGAAGAAA
ACCTTAATTGTATTTTACAAACTGAGACACAAAGTATTTTTCTCTGTATG
TGAAATAATTAAACTTTTTGAAAAGTTGGTATTATTTACGCTTCTCACGC
GACCAAAATTTGTCTGCAATCAGATCTGATGTATACGGAAATTACAGAAT
TTCATTGCCGCAGTGAGGCAATGTGATACGCTATTTGATACTTTAGATGC
CCTCTGGTACAGAGTAAGCCAAAATTAAATTATTTTTTCGACGAATAAAA
GGAAACACTTAACCCCATATTTACGGCTCTTGTTGTATCTTAGAAACAGA
CTTTGCAAAAATACCTTTTTTATTTTCAGCCATTTTAGCTGGTTTATTTG
CATATTCAGCACAACCAATAACAAGAGGAATAATCTCACAAATTGTTGAT
GCCAACGAACAAGGTAAGGAGATACAATTGAAGAAAGGATTTAGAAAAAA
TTTGTTACAATTACCTAAAATAGAATTCAACTCCAGTGGAAGGCTTCAAC
AACCTTAGATGAGAAGTTTTTATTCGAAATCTATTGATAAATGAAAGGTT
TTTTGCATTCAGCAATAGTGACCCAAGTCAATATTTTCTACGCATACCCT
AGCTTGGACCGTGGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCAAATTGTTGATGCCAACGAACAAGGTAAGGAGATACAATTGAAG
AAAGGATTTAGAAAAAAATTGTCACAATTACCTAAAATAGAATTCAACTC
CAGTGGCAGGCTTCAACAACCTTAGATGAGAATTGCATTCAGCAATTGTG
ACCCAAGTCAATCTTTTTTACGCATACCCTAGCTTGGACCGTGGCCCTGG
GGGGGGGGCACTCATGGCGGTCTGACACTACAAGGGTCTTCTTTTAGTTG
GACTGCTTTGACAATAAAAATCTGATGTATCTTTGTATTTGACTCACTTT
GATTTCACAAACCAATTTTTGGCCGCACATGCCATCATTTAGAAATCGAG
TGCACCACCCCTCCCCCTGGGACATTGGTGTCTCAACATTGGTTCACGTT
ATATCTTGGTAATCCTTTGACTTTTATTATTATTATTATTCCTTTTCTCC
CAAACAGGTGCAGTCTTTTCAGTACTTGGTTTCTTCCAAACCATCGTCAG
TTTGGTAGCCTCGTTATCTTACAATGCAATCTACATTTACACGAATCAAC
ATAACGAACCTGCTGCTGTGTTCATTATTGCTAGTTTCACTACAATCATT
CCTATCATTTTCTCAACGTAAGTTTTCCACTTTGTAAGTAACTTTATTAG
CTGTATGCTTTGTGTAAGCCAAAATCAATAACAGTGCTCAATGTTAATGA
TAACAGAGCTTTATACCTCGGATATCATTAATAAAAACATTTTTGCATAA
TCGTTTTTTTCAAATTTTGCTGACGTCAGCAGAAATCAGCAAAATACGAA
AATTTGCAATAAAGTCCTGACATCAGCAAAATTTCAAAAAAATAATTTTT
CAAAATGAACCTTTTAATGATGTGCAACTTTGGTCCAAATTTCATGTTCA
TATCATTAGCCAAACTGGAGTTATTTAAAAAACAAGTTTTGCTGACGTCA
GCAATTTTTGATTTTTGCGATTTTTCGCAAAATTGGCAAAACCTAAATTT
AAGTAACACCGATTTTCATGTTCTACATCGTAATGCACTTCTTTAAAGGT
ATAATTTATTATGCTAGGAGGGGTGGAATTGCCTCCGAAAAATTAACGAA
AATTTGGACACGCATTAATTTACCCGAGACTAGTTTGAGTAAAGAAAACG
ATTTAGTTTAATTTCATACTCACGGTTTCATGCCATCCAGGATGGCAATA
TTCAGTGAAATAAACGTTTTATAAAAATTTACAATTTAATGTCTTCAAAA
AAATTTTCTGACGTCAATTCAAAATAAGAATTATTCGAAAGTCTCGAAGA
GAAATTTTAGTCTGTGGCGGCATTTGGCGATGATTTCAGTTCGCTTGTTT
AATAAGTTCCGACCCGGATAGATAACAATCTCGAATTTCTCTGTATACGC
TGTATTGAAAACACAAAATGAGTCTGCAAGCTTCAAACAGTGCTCAACTA
ACTAGGAGCGGATATTCACTTTTTTCACAACTGATGATTGTAGAAATATA
AAACTCAGAGTCTGTAGTGAAATACAGTGTGTTCGTGGAAATCTTCTATT
TATAATTTAATTTTTCAATAGTTTTTACTAGTATAGTATTTTGTCAATGC
TTGCAAGTATCAACAAATATTATAGAACTATCCCTACTTCTAGACCAACC
TTGTGAAGATCTATGATTTGAAAAAAAATTTTGTCTTTCTTTTTTCAGAT
ATTTTTACTACGTCGAAAAAAAAAATCGTAACACTCAAAACGACGACGAA
AACACAGAACAACCAACACCACCCACAAACAAAAATTGCAATGACACAAA
AGAAGATGACAAAGGCGGAGAAGATTACGAAAGTATAGACAATGCTTTCA
ATGAAAATGATGATAGAAATGGACTAGTGATTTGATTGGTCAATTACGAA
TAAAAATGACAATGCAGCAGCAATCTCACTTGGATTTCATTGCGAGATGC
ATCAAAATATAATCCGATTTTAGAGACAAACGGGATGTTTCTTCAATGAA
AAGATTATTCTATAAGAGGTTTCAAAGTTATGAAATCGACTTTCAATCTC
TAGTGAATAGTACCGAGTTTAAAATGGCACATTTATGGAAAACTCCACAT
CTATGATTTTAAGTCTCATCTTTGCTCTTTGCCCGTCATTGCCAGTGGTA
GGACTTGTTTAGTAGTGATAAATTTTCGTAATTTACACCAGAAAAAAATG
TTTAAGATTTGCCACTATTGGCGAAAACCGGTTTGTTTCCGTAGAAAACA
TTACGTAATGAATATTGTGAATAACAAGGACACTACCCCGACAATACACT
CTAACCTAATTGTCTGTAATAACCACGTGGTTACGAACTTGCAACGGAGA
TTTTTGGCATCATTGAAACTTTCGCTGAATGCTGATGTCAAGCTAACATG
ATTGATAGGATAATATAAGACACACATTATTAATTTCTTAGGTTCACTGT
GAAAAAGCTTCAATCTACCAAAAACTGAAAAATTCACGGTGTTTTTTCTT
TTCTTCTGTAATACTGAGCTGATTTTGGTTTATTTGTTGGACACAAAAAA
AGTGCTTTAGGCTATCTTCGAAATGTTTCTTTCCCTTTGACCCGGTAGGA
TTTATTCAGACAGTGGGAGGTAAAAATAGCGGAAACTCTATCAGGTTTCC
ATGTGTTTATAACCGGAGATTTGAGTTCCGTTGTTTCCAAGTCAGCAAAC
TTACAATATTGGTCAAAATATATTGAGAATTTTGGTTAATTCCTCGTTTT
TAGCATTTTATAGTTCGCCGGGTGAGAAAGTGGCTTTTGGGCTATTTGTT
AAACTTGATCGAATATTTCAGTTTGGGTGGGGTTTATACCTTTCCCACCT
AGAGTTAGAGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051671TCONS_00051671Clytia hemisphaericatranscript
TCONS_00051670TCONS_00051670Clytia hemisphaericatranscript
TCONS_00051669TCONS_00051669Clytia hemisphaericatranscript
TCONS_00051668TCONS_00051668Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051670-proteinTCONS_00051670-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1224613..1232124 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18	0.17	0.2	0.07	0.3	0.17	0.59	0.64	0.75	1.48	1.92	0.33	3.62	4.17	3.86	6.63	1.15	2.5	4.27	5.33	1.66	1.09	0.81	1.48	3.81	4.25	4.05	2.6	3.41	3.08