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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051096 ID=TCONS_00051096|Name=TCONS_00051096|organism=Clytia hemisphaerica|type=transcript|length=1656bp
agcattttttgtaattttggcgagaacttaattTGGAGAATGacctaaaa
aataattttggtgggaactaaatttggcgaatttcgaGTTCGCTCGCtaa
tttcgccaaaattagtccTCGCAAAAATAAATCCCCTTAAGGTAGGTTCt
gacaaaaatttgaatcaCGTGCAAGAAAACATTATTCTTCAACAATTTAT
TTTTCCAAAGCAAGCAAGCAAGATTCTACAGAGAATCTGCTAAAAGTTTT
CAATCAAGTTTCTTTCTCATGTTTTGCTTTAACCAAACGAAGTATTGATA
AAACAAGAAACTGCATAATATTTCGTATCACTGGAAATAGCAACAGTACA
ATTTCTTATTTACGCTGCCTCTTGAACGAATACCATCATAAACTACAGTA
CCTTTTTACCGCTTTGTACAAGCAGGCAAATAATTATATGTAATAATTCT
TTCCCTTTTTTTCATATATTGTTAATTATGCTACATTAGTTGTTTTCACC
AAACTATACTAAGCCTTGTTGAGACTTTGTTTCATTCGACTCATCACAGA
TGGTGATTGTTTAAAAGGTAAAATTTGGTTGATCATACATTAATCGTACC
CTAACAACCATGAGAGGATTGGGTTGGACTTTACCAGGTTTTTAATGACG
TCAAAAGTTCCTGTATCTTTGAGTCGTATGTCGTATACGATGGTTTCAGA
AATTCGACCTTGATTGACCCTAGAAAACTTAAATCCGATCCCCTTGGACA
GTTTTTTTAAGATAGGTTGATATGTTTGTAATTCATTTGAATCCAATACA
TAGTTCCAGGAAGTAAAGTGGATGCATTCATAAGACTCAATCTCACTTAC
TCAATTTCACTGCCATCTCAATAAAGATCCGAAATGTAAAATCCACGTTC
TGTTAGTAGTTCCAGCTAAtacaatattattttttatgaagCAACCACGA
TCAAATCTGGTGGTTGGCTGGTGTTACACGTATCACTGGAGCTTCCACAA
CCATCCTTAATTGTTGCGATATCCATCCAACATAAAGGACATTTTTTCTG
TTCAGCAAGCCATTTGACTANGTATCACTGGAGCTTCCACAACCATCCTT
AATTGTTGCGATATCCATCCAACATAAAGGACATTTTTTCTGTTCAGCAA
GCCATTTGACTATACACAAAACATGAAAGAAATGATTACATTTAAACGAG
CAGATTTGTTTATTAGTATCGAAAGGTTCTTTACAAATTACACATTCATC
CATTGCAGTTTTGGTAACAGCCGTCTGGAAACTGATCACATTTATCTTGT
CGTAAAACTTGATTATATCTGCCGAACGGTCGTTGGCACTCCAGCAACAG
TATAATATAAAGTCGCAAAATTTAACAGTTAATCCTGAATCGAGTGTCAC
GACAATGTCACCgtttaaatgttttgatttgcgGAAGACCTTGTATCGAC
ATCTCCCAAGTATCCATAGAACCACTAGTATAACGGAAAATACAAGGACC
AGTGGTATCAAGAAGTTTTTGAATTCCATTGTAGATGCATTGACCATATT
ATTTTTGCCACCAAAATGTTTATATTATGAggtgtttgaattttttatat
agtttttaaagctctctttattttatttgtttttattttctcattttctg
tCAAGA Run BLAST on NCBI protein sequence of TCONS_00051096-protein >TCONS_00051096-protein ID=TCONS_00051096-protein|Name=TCONS_00051096-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MVNASTMEFKNFLIPLVLVFSVILVVLWILGRCRYKVFRKSKHLNGDIVV
TLDSGLTVKFCDFILYCCWSANDRSADIIKFYDKINVISFQTAVTKTAMD
ECVICKEPFDTNKQICSFKCNHFFHVLCIVKWLAEQKKCPLCWMDIATIK
DGCGSSSDX Run BLAST on NCBI transcript from alignment at scaffold_193:234450..236105 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051096 ID=TCONS_00051096|Name=TCONS_00051096|organism=Clytia hemisphaerica|type=transcript|length=1656bp|location=Sequence derived from alignment at scaffold_193:234450..236105 (Clytia hemisphaerica)
TCTTGacagaaaatgagaaaataaaaacaaataaaataaagagagcttta
aaaactatataaaaaattcaaacaccTCATAATATAAACATTTTGGTGGC
AAAAATAATATGGTCAATGCATCTACAATGGAATTCAAAAACTTCTTGAT
ACCACTGGTCCTTGTATTTTCCGTTATACTAGTGGTTCTATGGATACTTG
GGAGATGTCGATACAAGGTCTTCcgcaaatcaaaacatttaaacGGTGAC
ATTGTCGTGACACTCGATTCAGGATTAACTGTTAAATTTTGCGACTTTAT
ATTATACTGTTGCTGGAGTGCCAACGACCGTTCGGCAGATATAATCAAGT
TTTACGACAAGATAAATGTGATCAGTTTCCAGACGGCTGTTACCAAAACT
GCAATGGATGAATGTGTAATTTGTAAAGAACCTTTCGATACTAATAAACA
AATCTGCTCGTTTAAATGTAATCATTTCTTTCATGTTTTGTGTATAGTCA
AATGGCTTGCTGAACAGAAAAAATGTCCTTTATGTTGGATGGATATCGCA
ACAATTAAGGATGGTTGTGGAAGCTCCAGTGATACNTAGTCAAATGGCTT
GCTGAACAGAAAAAATGTCCTTTATGTTGGATGGATATCGCAACAATTAA
GGATGGTTGTGGAAGCTCCAGTGATACGTGTAACACCAGCCAACCACCAG
ATTTGATCGTGGTTGcttcataaaaaataatattgtaTTAGCTGGAACTA
CTAACAGAACGTGGATTTTACATTTCGGATCTTTATTGAGATGGCAGTGA
AATTGAGTAAGTGAGATTGAGTCTTATGAATGCATCCACTTTACTTCCTG
GAACTATGTATTGGATTCAAATGAATTACAAACATATCAACCTATCTTAA
AAAAACTGTCCAAGGGGATCGGATTTAAGTTTTCTAGGGTCAATCAAGGT
CGAATTTCTGAAACCATCGTATACGACATACGACTCAAAGATACAGGAAC
TTTTGACGTCATTAAAAACCTGGTAAAGTCCAACCCAATCCTCTCATGGT
TGTTAGGGTACGATTAATGTATGATCAACCAAATTTTACCTTTTAAACAA
TCACCATCTGTGATGAGTCGAATGAAACAAAGTCTCAACAAGGCTTAGTA
TAGTTTGGTGAAAACAACTAATGTAGCATAATTAACAATATATGAAAAAA
AGGGAAAGAATTATTACATATAATTATTTGCCTGCTTGTACAAAGCGGTA
AAAAGGTACTGTAGTTTATGATGGTATTCGTTCAAGAGGCAGCGTAAATA
AGAAATTGTACTGTTGCTATTTCCAGTGATACGAAATATTATGCAGTTTC
TTGTTTTATCAATACTTCGTTTGGTTAAAGCAAAACATGAGAAAGAAACT
TGATTGAAAACTTTTAGCAGATTCTCTGTAGAATCTTGCTTGCTTGCTTT
GGAAAAATAAATTGTTGAAGAATAATGTTTTCTTGCACGtgattcaaatt
tttgtcaGAACCTACCTTAAGGGGATTTATTTTTGCGAggactaattttg
gcgaaattaGCGAGCGAACtcgaaattcgccaaatttagttcccaccaaa
attattttttaggtCATTCTCCAaattaagttctcgccaaaattacaaaa
aatgct Coding sequence (CDS) from alignment at scaffold_193:234450..236105 >TCONS_00051096 ID=TCONS_00051096|Name=TCONS_00051096|organism=Clytia hemisphaerica|type=CDS|length=480bp|location=Sequence derived from alignment at scaffold_193:234450..236105 (Clytia hemisphaerica)
ATGGTCAATGCATCTACAATGGAATTCAAAAACTTCTTGATACCACTGGT
CCTTGTATTTTCCGTTATACTAGTGGTTCTATGGATACTTGGGAGATGTC
GATACAAGGTCTTCcgcaaatcaaaacatttaaacGGTGACATTGTCGTG
ACACTCGATTCAGGATTAACTGTTAAATTTTGCGACTTTATATTATACTG
TTGCTGGAGTGCCAACGACCGTTCGGCAGATATAATCAAGTTTTACGACA
AGATAAATGTGATCAGTTTCCAGACGGCTGTTACCAAAACTGCAATGGAT
GAATGTGTAATTTGTAAAGAACCTTTCGATACTAATAAACAAATCTGCTC
GTTTAAATGTAATCATTTCTTTCATGTTTTGTGTATAGTCAAATGGCTTG
CTGAACAGAAAAAATGTCCTTTATGTTGGATGGATATCGCAACAATTAAG
GATGGTTGTGGAAGCTCCAGTGATACNTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051096-exon-scaffold_193-1491911889:234450..236105 | TCONS_00051096-exon-scaffold_193-1491911889:234450..236105 | Clytia hemisphaerica | exon |
| TCONS_00051096-exon-scaffold_193-1510915933:234450..236105 | TCONS_00051096-exon-scaffold_193-1510915933:234450..236105 | Clytia hemisphaerica | exon |
| TCONS_00051096-exon-scaffold_193-1575043694:234450..236105 | TCONS_00051096-exon-scaffold_193-1575043694:234450..236105 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_193 | supercontig | scaffold_193:234450..236105 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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